CmaCh04G005180 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CGGGGTTCCTCTTCTTCTACTACTTCTTCCTCCATTTTTAATATCTGATCTGAACTGCAAACCAGTTTCGATTCGATTCGATTCGGTTCTCTTAGATTTCGGGGTTGGTAATCGGAGAACATCATGCGCCGGGAAGTGGTATTGCCGTTGTTCGTGCTCTGTTTCTTCGCCGCAGATCTTGTTCGAACTGCCCATTCAATCTGGTTGAACTTACCTGCATCTGGAACCAAGTGCGTCTCCGAGGAAATCCAGACCAACGTTGTTGTTCTTGCCGATTTTGTCGTTGTCGCTGATCATACTCATGCTCCCACCATTTCTGTCAAGGTCAAATTTCGAGATTAAACCTTTTTTCTTCTTTGATTCTTCGTTCGCCAATGTCTCTTTTATTTGTGCGTTTTTTATTTGAATTTCTCGGTTTGATAATTTGTTGGGCTGTATCAAAATTGATAGGATTATGAAATAAACCCGATGGGGTAATGCATTGCTACTTATTTGTTGATTTCTCCTCTCCCGTTTGGTTATGACCGATCAATTTCGAAATTCCTAGAACTTTGATCTATTTCTTGTGCGTCATGTCCTTTGTTTCTAATCCTGGAGATAAAATTTCATGTTGTCATTGATGAATTAACGGGACCAAAGGATTTTTCCGGCTGTGTTGGTTTGTATAAATCCAGTGCGCCAATGGAAGTGTCCTTGTTTCTCTGGCTTGTTGCTCAAGGGAACTAAAGTCTGATGTTCTCACAACGCTTTAGGCATATCTTAGCAGGGAGATTAAAGAAAGGCATCAATTCTATGATAGCCTCTTCTTTACTATTATGGAGGTTTTTTTCCATCCAATTTTAGTTTGTTTGGTTTCTGAGTTTGTCTGTGAAGATTATCTCAACAGGTTTAGAGGAACATATGAAGGAAGACCAATGCCAGGTTGTGGATTAGTCTTAAGGGGATGGTACCTTTGAAATCTGCCGCACACCCACAAATGATTTGGTTTTTGCAAATTGTTTTAAATTCTTAATGATTGTTTGGGAGGATGATTCATGGGGAAGGTGACCAAAAAGTTGAATCTCGAATTGTTTTAGTATCAAAACTTGACTAGTCTATATATTATTGACAGTGATAGATCTTCATTTAAAATTCGATTTGAGTCTCTAGGTGATATATTTTGTCCATTTCTTTAGTAGATTCCATTGAAGGGTTGTGTTTTGACCTCTGAATTTGTGATCTCCCACATTGGTTGGGGAGGAGAATAAAACACCATTTATAAGGGAGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTGAGGGGAGGCCCGAAAGGGAAAGCTCAAAGAAGACAATATCTGCTAGCTGTGGATCTGGGACGTTACAAATGGTATAAGAGCCAGACACCGGACGATGTGTCAGCCTTCTCGCTGTTCCCCGAAGGGGGGTAGACACTAGGCGGTGTGCCAGTAAGGCGTTGTGCCCCAAAGGGGGTGGATTTGGTGGGGGTCCCACATCAAATTGGAGAAAGGAACGAATGCCAATGAGGACGCTAGGCCCCAAAGGGGGTGGATTGTGATGTCTCACATTGGTTGGGAGGAGAACAAAACACCCTTATAAGGGAGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCTCAAAGAAGACAATATCTGCTAGCTGTGGATCTGGGACGTTACAGAATTTCTGTTGGACATTTTTGAGTGATCATCTCTCTTAAAAAATAAGCTTATCTACTCATATGATATATGTTATTTCTTGGCTTTTTTCTTACTAATTAATCTAAGACTTGAACAATTCTTATGGAAGTTTAGACTTGGCAGTGCGTCAGGCCATTTGATATGTACTACTGATAAATCCACCGTTCATGGATTGTTGTAAACAACCAGATGAACTGTACTATATGTTTTAGGATGTTTAGCTGAATCCATTGGCTGTGCCTCCTTTTAAGTAATTTATATCTGTCATTTGGTGGTGACATGGTTAGTCGATTCAATGATGTCAAACATGTTTGAATCTGTGATCTGATTATGATTCCGTAACTTTTAACGCTAGATTAATAATCACATACAGATTCGGTGCAAATCGATGTTTATTCTTTGTGTGTGGAAAAATTTTCCTTTTAAGTTTTGAAGGCCAGATTCCTTAATGTCTTGATTATATGGTATTATTTTGCACTTTACTGATTGATGACAGTCTCCTTCAGGTGACATCTCCATACGGGAACAATCTTCATCACTCGGAGAACATAACGCATGGTCAGTTTGCGTTTACGACAAGTGAGGGTGGTAATTACCTAGCCTGTTTCTGGCTGACTGACCACAAGCATGAAGCTAGTACTGAGGTAAGTGTCAACCTTGACTGGAGAACAGGGATTGCAGCCAAGGATTGGGAATCAGTCGCAAAAAAAGAGAAAATTGAGGTAACTAACTACTTCCTCCACTTTTCCATATTCCACTACAACTTGTAATATCCATTCGAATCAAACTCGTTCTTGTTTAGGGTGTTGAACTCGAGCTGAGGAAACTCGAGGGAGCTGTCGAAGCTATCCATGAAAATCTGATCTATCTCAGGGACAGGTAACCAAGTTTCCATTGTAGAACTGAATGCTTACCTAAATCTAGCCAATGTCCACAACCTTCTCCAACTCGTTACTCTGGTTTATATAATTTTGGAGTCTTGCAGAGAAGCTATTATGAGGACGGTCAGCGAGAGAACAAACTCACGAGTTGCGTGGTATAGTATCATGTCCTTGGGTGTCTGCATCATTGCTTCTACTCTACAGATATGGTACTTGAAGCGCTTCTTTCAGAAGAAAAAGCTTATTTAG CGGGGTTCCTCTTCTTCTACTACTTCTTCCTCCATTTTTAATATCTGATCTGAACTGCAAACCAGTTTCGATTCGATTCGATTCGGTTCTCTTAGATTTCGGGGTTGGTAATCGGAGAACATCATGCGCCGGGAAGTGGTATTGCCGTTGTTCGTGCTCTGTTTCTTCGCCGCAGATCTTGTTCGAACTGCCCATTCAATCTGGTTGAACTTACCTGCATCTGGAACCAAGTGCGTCTCCGAGGAAATCCAGACCAACGTTGTTGTTCTTGCCGATTTTGTCGTTGTCGCTGATCATACTCATGCTCCCACCATTTCTGTCAAGGTGACATCTCCATACGGGAACAATCTTCATCACTCGGAGAACATAACGCATGGTCAGTTTGCGTTTACGACAAGTGAGGGTGGTAATTACCTAGCCTGTTTCTGGCTGACTGACCACAAGCATGAAGCTAGTACTGAGGTAAGTGTCAACCTTGACTGGAGAACAGGGATTGCAGCCAAGGATTGGGAATCAGTCGCAAAAAAAGAGAAAATTGAGGGTGTTGAACTCGAGCTGAGGAAACTCGAGGGAGCTGTCGAAGCTATCCATGAAAATCTGATCTATCTCAGGGACAGAGAAGCTATTATGAGGACGGTCAGCGAGAGAACAAACTCACGAGTTGCGTGGTATAGTATCATGTCCTTGGGTGTCTGCATCATTGCTTCTACTCTACAGATATGGTACTTGAAGCGCTTCTTTCAGAAGAAAAAGCTTATTTAG ATGCGCCGGGAAGTGGTATTGCCGTTGTTCGTGCTCTGTTTCTTCGCCGCAGATCTTGTTCGAACTGCCCATTCAATCTGGTTGAACTTACCTGCATCTGGAACCAAGTGCGTCTCCGAGGAAATCCAGACCAACGTTGTTGTTCTTGCCGATTTTGTCGTTGTCGCTGATCATACTCATGCTCCCACCATTTCTGTCAAGGTGACATCTCCATACGGGAACAATCTTCATCACTCGGAGAACATAACGCATGGTCAGTTTGCGTTTACGACAAGTGAGGGTGGTAATTACCTAGCCTGTTTCTGGCTGACTGACCACAAGCATGAAGCTAGTACTGAGGTAAGTGTCAACCTTGACTGGAGAACAGGGATTGCAGCCAAGGATTGGGAATCAGTCGCAAAAAAAGAGAAAATTGAGGGTGTTGAACTCGAGCTGAGGAAACTCGAGGGAGCTGTCGAAGCTATCCATGAAAATCTGATCTATCTCAGGGACAGAGAAGCTATTATGAGGACGGTCAGCGAGAGAACAAACTCACGAGTTGCGTGGTATAGTATCATGTCCTTGGGTGTCTGCATCATTGCTTCTACTCTACAGATATGGTACTTGAAGCGCTTCTTTCAGAAGAAAAAGCTTATTTAG MRREVVLPLFVLCFFAADLVRTAHSIWLNLPASGTKCVSEEIQTNVVVLADFVVVADHTHAPTISVKVTSPYGNNLHHSENITHGQFAFTTSEGGNYLACFWLTDHKHEASTEVSVNLDWRTGIAAKDWESVAKKEKIEGVELELRKLEGAVEAIHENLIYLRDREAIMRTVSERTNSRVAWYSIMSLGVCIIASTLQIWYLKRFFQKKKLI Homology
BLAST of CmaCh04G005180 vs. ExPASy Swiss-Prot
Match: Q6IDL4 (Transmembrane emp24 domain-containing protein p24delta3 OS=Arabidopsis thaliana OX=3702 GN=At1g09580 PE=1 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 1.1e-78 Identity = 146/213 (68.54%), Postives = 176/213 (82.63%), Query Frame = 0
BLAST of CmaCh04G005180 vs. ExPASy Swiss-Prot
Match: Q9FVU0 (Transmembrane emp24 domain-containing protein p24delta4 OS=Arabidopsis thaliana OX=3702 GN=CYB PE=1 SV=1) HSP 1 Score: 268.5 bits (685), Expect = 6.6e-71 Identity = 133/213 (62.44%), Postives = 171/213 (80.28%), Query Frame = 0
BLAST of CmaCh04G005180 vs. ExPASy Swiss-Prot
Match: Q8RWM6 (Transmembrane emp24 domain-containing protein p24delta5 OS=Arabidopsis thaliana OX=3702 GN=At1g21900 PE=1 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 1.1e-68 Identity = 134/207 (64.73%), Postives = 161/207 (77.78%), Query Frame = 0
BLAST of CmaCh04G005180 vs. ExPASy Swiss-Prot
Match: F4J4Y0 (Transmembrane emp24 domain-containing protein p24delta6 OS=Arabidopsis thaliana OX=3702 GN=At3g10780 PE=1 SV=1) HSP 1 Score: 199.9 bits (507), Expect = 2.9e-50 Identity = 104/192 (54.17%), Postives = 134/192 (69.79%), Query Frame = 0
BLAST of CmaCh04G005180 vs. ExPASy Swiss-Prot
Match: Q9LQY3 (Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana OX=3702 GN=At1g26690 PE=2 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 4.9e-42 Identity = 87/211 (41.23%), Postives = 137/211 (64.93%), Query Frame = 0
BLAST of CmaCh04G005180 vs. ExPASy TrEMBL
Match: A0A6J1J056 (transmembrane emp24 domain-containing protein p24delta3-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111481506 PE=3 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 5.9e-115 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of CmaCh04G005180 vs. ExPASy TrEMBL
Match: A0A6J1FVP8 (transmembrane emp24 domain-containing protein p24delta3-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447721 PE=3 SV=1) HSP 1 Score: 417.9 bits (1073), Expect = 2.5e-113 Identity = 207/212 (97.64%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of CmaCh04G005180 vs. ExPASy TrEMBL
Match: A0A0A0L744 (GOLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G214030 PE=3 SV=1) HSP 1 Score: 391.3 bits (1004), Expect = 2.5e-105 Identity = 189/212 (89.15%), Postives = 203/212 (95.75%), Query Frame = 0
BLAST of CmaCh04G005180 vs. ExPASy TrEMBL
Match: A0A1S3C1Z4 (transmembrane emp24 domain-containing protein p24delta3-like OS=Cucumis melo OX=3656 GN=LOC103496123 PE=3 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 6.1e-104 Identity = 187/212 (88.21%), Postives = 203/212 (95.75%), Query Frame = 0
BLAST of CmaCh04G005180 vs. ExPASy TrEMBL
Match: A0A6J1D5F4 (transmembrane emp24 domain-containing protein p24delta3-like OS=Momordica charantia OX=3673 GN=LOC111017772 PE=3 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 1.4e-100 Identity = 186/212 (87.74%), Postives = 197/212 (92.92%), Query Frame = 0
BLAST of CmaCh04G005180 vs. NCBI nr
Match: XP_022982726.1 (transmembrane emp24 domain-containing protein p24delta3-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 423.3 bits (1087), Expect = 1.2e-114 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of CmaCh04G005180 vs. NCBI nr
Match: KAG7031012.1 (Transmembrane emp24 domain-containing protein p24delta3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 418.3 bits (1074), Expect = 3.9e-113 Identity = 208/212 (98.11%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of CmaCh04G005180 vs. NCBI nr
Match: XP_023533831.1 (transmembrane emp24 domain-containing protein p24delta3-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 418.3 bits (1074), Expect = 3.9e-113 Identity = 208/212 (98.11%), Postives = 211/212 (99.53%), Query Frame = 0
BLAST of CmaCh04G005180 vs. NCBI nr
Match: XP_022942793.1 (transmembrane emp24 domain-containing protein p24delta3-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 417.9 bits (1073), Expect = 5.1e-113 Identity = 207/212 (97.64%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of CmaCh04G005180 vs. NCBI nr
Match: KAG6600353.1 (Transmembrane emp24 domain-containing protein p24delta3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 395.6 bits (1015), Expect = 2.7e-106 Identity = 196/200 (98.00%), Postives = 198/200 (99.00%), Query Frame = 0
BLAST of CmaCh04G005180 vs. TAIR 10
Match: AT1G09580.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 294.3 bits (752), Expect = 8.0e-80 Identity = 146/213 (68.54%), Postives = 176/213 (82.63%), Query Frame = 0
BLAST of CmaCh04G005180 vs. TAIR 10
Match: AT1G57620.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 268.5 bits (685), Expect = 4.7e-72 Identity = 133/213 (62.44%), Postives = 171/213 (80.28%), Query Frame = 0
BLAST of CmaCh04G005180 vs. TAIR 10
Match: AT1G21900.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 261.2 bits (666), Expect = 7.5e-70 Identity = 134/207 (64.73%), Postives = 161/207 (77.78%), Query Frame = 0
BLAST of CmaCh04G005180 vs. TAIR 10
Match: AT3G10780.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 199.9 bits (507), Expect = 2.0e-51 Identity = 104/192 (54.17%), Postives = 134/192 (69.79%), Query Frame = 0
BLAST of CmaCh04G005180 vs. TAIR 10
Match: AT1G26690.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 172.6 bits (436), Expect = 3.5e-43 Identity = 87/211 (41.23%), Postives = 137/211 (64.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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