CmaCh04G004610 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G004610
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionzinc finger SWIM domain-containing protein 7
LocationCma_Chr04: 2349088 .. 2352413 (+)
RNA-Seq ExpressionCmaCh04G004610
SyntenyCmaCh04G004610
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGCGAGTACCCTTGTCGCCGAAGCAGTGTGGAAGCAGATCGAGTCGACTCGATCAGGTTGCGTTTATCGATTGTTTTCTTCCCTAATTTTCGGATTTTCGTCCTCAAAAAGTTGTAATTAAACTGTACTGATTTCGCAGTGACTGACGATCAGCTTTCAATGTGAGTATTCTCGATTCCTTCCATTAGGAGAAGTTCTTCATCTTGTTATGAAACTTCGAAGTTGACTGTGTCGGCGTTGGTTCCAGATTGCATTTCTTGTTTGGGAAGAACTTCGAGCGAGCTACTCGGATTGTGGATCAAAGTGGAGTGAAGAAAATTTCAGGCGAGCCAAGCGGACGGTCCATCTTTCAGGTCATTACAGTATTTTTCATCTTATTCTTGTTGAAAATTCGATCAAATATCGATTTTAAGTTCACGGTTTCCATTAGGGTTTGCTTAAACTGCCCTAGAACAGATCGTAGTTACATTCTGCTTTTGTTTGAAGCCTTGTGAATGAATGTTCTTGAATTAAACCACGGTTTTTTCTCCATCTCTCTAGTGGTAGAGAAGGATTTACCCGACACTTTGGGAATGATTGGAGAAGGAATTACATTGCAGAATGCTGTTGGTTTGATATCATGTGCATTGTAGAATGTTGCTGGTTTGATAATCATGTGCATTGTAGAATGTTGCTGGTTTGATAATCATGTGCATTGTAGAATGTTGCTGGTTTGATAATCATGTGCATTGTAGAATGTTGCTGGTTTGATATTGTCATGTACTTGTATAATGCTGCTGGTTTGATATCATCTACATTGTAGAATGTTGCTGGTTTGATATCATGTACTATGTTATGTATTACTGAACCTGCAAACTATATTCTGGAATATGAATATAAGATTAAATCTTTAACCTATGATTAAATCTTTAACATAGTATTAGAGTCGACCCTTTTGAGTCGTAGCAACATTATTCAAAGTTGAACCCTCATTATGGTTTAAGTTTGCTTGGCCATATAAATCAACATCGAGAAAACCAAGAGCTACAGTAACAGCCCAAGCTCAAGCCCACTGCTATTAGATATTGTTCTCTTTGGGTTTTCTCTTTTAGACTTCCCCTAAGGTTTTTAAAACGTGTTTGCTAGAGAGAGAGGTTTCCACACTCTTATAAAGAATGATTTGTGCCTCTCTCCAAAAGTTGTGGGATCCCACAATCCACTCCCCCTTCGGGGCCAACGTCCTCGTTGTCACACCTCCGATGTCTAGCTCAGATCTCATATTAGTTGGAGAGGGGAACAAAACATTTTTTATAAGAGTGTGGAAACCTCTCCCTAGCAGACACGTTTTAAAATCCTTGAGGGGAAGCCCGAAAGGGAAAGTTCAAAGAGAACAATATCTGCTAGTGGTGGGGTTGAGCTATTACATTCATACTCAAGATGACGGAGTGTGGTTATTTAGTCATTTGTACATGTTTCTACAAGACTTTCCCCAAATCTTTGGTTGCCAGATTCAAAACCAGCCAAATTGTTTGTTTAGAACAAGTAACATTCTTGAGAATCGTTCACAGAATGAATTCTGCTTTCTTTCAATGCTAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATTTCTGTTTCCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAGCTTTGCGTAAGGATCACTTCTTTCTTGTTAAGTGTAGCTGAGTTGAAAGCTTTAAGAAAATCCTATTACTTCCACTTCCCAATCATCTTTATTTGTCGTTCTTTATTTCGTAGTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCTTCACTGGGGGCTTGTGTTGAAGTTAAAGTATCTGATGAAGAGCTAGCGATATTATTGTCCAATCTTTAGTGACTTTATCAAAGCCAAAGCTCTCAGTACTCAAAGTTTGAGAGGTAATCAAACACATTGTTGTATTTTACCAACTTTTTCCTTCTGTACTTGAGCAGCTTTTGTATCCTGTTGAGCACATAATGAAAGTTGCATAATTATAACCATCACAACGTCCTAGGTTTCATTGGTGAGCTGGTAAGTCTCACTTTGTCACGTCACGCACTGTGAGATCCCGCATCAGTTGGAGAGGCGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTCCCCAGTAGACGCGTTTTAAAACCTGAGGGGAAGCCCAGAAGGGAGAGCCCAATGAGGACAATATTTGCTAGTGGTGGGCTTGAACTGTTACAAATGGTATTAAAGTTAGACACCGGACGGTGTGTCAACGAGGATGCTGAGCCCCAATGGGGTAAATTATGACATCCCACATCAGTTGGAAAGGGGAACAAAGCATTCCTTATAAGGGTATGGAAACCTCTCGCTAGTAGATGCGTTTTAAAACCTTGAGGGAAAGTCCAAAAAAGACAATATTTGCTAGTAGGGGGATTATTACAAATGTTATTAGAGCCGGACACAGTGTGCCAACGAGGACGCCAAGCCTCAAGGGGGTGGATTGTGAGATCTCACATCAGTTGGAGAGCGGAACGAAATATTCCTTGGGTGTGGAAACTTCCCCTTAGTAGACGCATTTTAAAACCTTGAGGGAAAGTCCAAAGATGATAGTACCTGTTACCGGTGAGCTTGAACTGTTATAAACTACCATGTTCTGTATTTATTTCATTAAATTAGAACAAACCAACCAATATCCCCTCTTCCTCGTTCCTTTTTCTTCAGGTTCCATAATATTTGAGGTGAAACCATAAACATGGAGTAGAAAACTCTAAGCAGGACTTACAAAAGGTCTATACCTTATACTTTCCAGATTGGGATCATATAAAACGTTGCAAGTTTCTGTTAAGGTTAATCATTGATCTACATGAATATGATAGTTATTAATGATTGTGTTTCATTTCTGTAAGATATATCATTGATTCATATCTATGAACATGCTTGCAAATTATAACCATAGTCTAATACATGCTTGCATATTAAGTTTTCATGATAGATGGATATTGACCCATGGATGTCAATTATTATTCTAGAACACTGGCAGTGCTATTTGGACGACAGTTTTTCTCTTGCAAACAGATTTTGTACAAGGAAAGTTTTGGCCATTACCATATGTCAAGTCTGCCGTTACTATTAACATCCAGTTCAAATACATTATTTATCTGTATAGTTTAAGAGTCGGGATTTGTGATTGGGTTCCTTGTATGATATATTTGTTTCGGGGCATTGGATATTTGAACCAAAAGTACTTGTCTGAAATAGTTGAGCTATACTCAGGTTGACAAAAATTACAAGAGTTCGAAAGACG

mRNA sequence

ATGAGTGCGAGTACCCTTGTCGCCGAAGCAGTGTGGAAGCAGATCGAGTCGACTCGATCAGTGACTGACGATCAGCTTTCAATATTGCATTTCTTGTTTGGGAAGAACTTCGAGCGAGCTACTCGGATTGTGGATCAAAGTGGAGTGAAGAAAATTTCAGGCGAGCCAAGCGGACGGTCCATCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATTTCTGTTTCCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAGCTTTGCTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCTTCACTGGGGGCTTGTGTTGAAGTTAAAGTATCTGATGAAGAGCTAGCGATATTATTGTCCAATCTTTAGTGACTTTATCAAAGCCAAAGCTCTCAGTACTCAAAGTTTGAGAGAACACTGGCAGTGCTATTTGGACGACAGTTTTTCTCTTGCAAACAGATTTTGTACAAGGAAAGTTTTGGCCATTACCATATGTCAAGTCTGCCGTTACTATTAACATCCAGTTCAAATACATTATTTATCTGTATAGTTTAAGAGTCGGGATTTGTGATTGGGTTCCTTGTATGATATATTTGTTTCGGGGCATTGGATATTTGAACCAAAAGTACTTGTCTGAAATAGTTGAGCTATACTCAGGTTGACAAAAATTACAAGAGTTCGAAAGACG

Coding sequence (CDS)

ATGAGTGCGAGTACCCTTGTCGCCGAAGCAGTGTGGAAGCAGATCGAGTCGACTCGATCAGTGACTGACGATCAGCTTTCAATATTGCATTTCTTGTTTGGGAAGAACTTCGAGCGAGCTACTCGGATTGTGGATCAAAGTGGAGTGAAGAAAATTTCAGGCGAGCCAAGCGGACGGTCCATCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATTTCTGTTTCCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAGCTTTGCTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCTTCACTGGGGGCTTGTGTTGAAGTTAAAGTATCTGATGAAGAGCTAGCGATATTATTGTCCAATCTTTAG

Protein sequence

MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRSIFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKVSDEELAILLSNL
Homology
[Close]
BLAST of CmaCh04G004610 vs. ExPASy TrEMBL
Match: A0A6J1J6W2 (zinc finger SWIM domain-containing protein 7 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111481893 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 2.9e-67
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60
           MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS
Sbjct: 1   MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV 120
           IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV
Sbjct: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of CmaCh04G004610 vs. ExPASy TrEMBL
Match: A0A6J1FSJ7 (zinc finger SWIM domain-containing protein 7 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447762 PE=4 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 5.4e-66
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0 

Query: 1   MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60
           MSASTL AEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS
Sbjct: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV 120
           IFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGAC+EVKV
Sbjct: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of CmaCh04G004610 vs. ExPASy TrEMBL
Match: A0A1S3BZP2 (zinc finger SWIM domain-containing protein 7 OS=Cucumis melo OX=3656 GN=LOC103494794 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.6e-62
Identity = 123/132 (93.18%), Postives = 127/132 (96.21%), Query Frame = 0 

Query: 1   MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60
           MSAS +VAEAVWK+IESTR VTDDQLSILHFLFGKNFERATRIVDQ GVKKISG PS RS
Sbjct: 1   MSASIVVAEAVWKRIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV 120
           IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAAS+GAC+EVKV
Sbjct: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASVGACIEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of CmaCh04G004610 vs. ExPASy TrEMBL
Match: A0A0A0KWG5 (SWIM-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G001010 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 2.8e-62
Identity = 123/132 (93.18%), Postives = 126/132 (95.45%), Query Frame = 0 

Query: 1   MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60
           MSAS +VAEAVWKQIESTR VTDDQLSILHFLFGKNFERATRIVDQ GVKKISG PS RS
Sbjct: 1   MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSTRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV 120
           IFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAAS+GAC+EVKV
Sbjct: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASVGACIEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of CmaCh04G004610 vs. ExPASy TrEMBL
Match: A0A6J1D5Z4 (zinc finger SWIM domain-containing protein 7 OS=Momordica charantia OX=3673 GN=LOC111017621 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.2e-62
Identity = 121/132 (91.67%), Postives = 126/132 (95.45%), Query Frame = 0 

Query: 1   MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60
           MSAS +VAEAVWKQI+STRSVTDDQLS+LHFLFGKNFERATRIVDQ GVKKI GEPSGRS
Sbjct: 1   MSASAMVAEAVWKQIKSTRSVTDDQLSVLHFLFGKNFERATRIVDQRGVKKIYGEPSGRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV 120
           IFQVVGESRRKEEYFCFPENFCACYSFFYD VNRGEQLCCKHQLAARLAASLGA +E KV
Sbjct: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDTVNRGEQLCCKHQLAARLAASLGAFIEAKV 120

Query: 121 SDEELAILLSNL 133
           SDEELA+LLSNL
Sbjct: 121 SDEELALLLSNL 132

[Close]
BLAST of CmaCh04G004610 vs. NCBI nr
Match: XP_022983272.1 (zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima] >XP_022983279.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima] >XP_022983286.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima])

HSP 1 Score: 264.2 bits (674), Expect = 5.9e-67
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0 

Query: 1   MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60
           MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS
Sbjct: 1   MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV 120
           IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV
Sbjct: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of CmaCh04G004610 vs. NCBI nr
Match: XP_022942858.1 (zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita moschata] >XP_022942859.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita moschata])

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0 

Query: 1   MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60
           MSASTL AEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS
Sbjct: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV 120
           IFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGAC+EVKV
Sbjct: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of CmaCh04G004610 vs. NCBI nr
Match: KAG7030956.1 (Zinc finger SWIM domain-containing protein 7 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 259.6 bits (662), Expect = 1.5e-65
Identity = 128/132 (96.97%), Postives = 130/132 (98.48%), Query Frame = 0 

Query: 1   MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60
           MSASTL AEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS
Sbjct: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV 120
           +FQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGAC+EVKV
Sbjct: 61  VFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of CmaCh04G004610 vs. NCBI nr
Match: KAG6600296.1 (Zinc finger SWIM domain-containing protein 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 258.8 bits (660), Expect = 2.5e-65
Identity = 128/132 (96.97%), Postives = 130/132 (98.48%), Query Frame = 0 

Query: 1   MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60
           MSASTL AEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISG+PSGRS
Sbjct: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGDPSGRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV 120
           IFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGAC+EVKV
Sbjct: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of CmaCh04G004610 vs. NCBI nr
Match: XP_023526305.1 (zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita pepo subsp. pepo] >XP_023526312.1 zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.7 bits (657), Expect = 5.5e-65
Identity = 127/132 (96.21%), Postives = 130/132 (98.48%), Query Frame = 0 

Query: 1   MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60
           MSASTL AEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVK+ISG+PSGRS
Sbjct: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV 120
           IFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGAC+EVKV
Sbjct: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of CmaCh04G004610 vs. TAIR 10
Match: AT4G33925.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 192.2 bits (487), Expect = 2.7e-49
Identity = 90/132 (68.18%), Postives = 112/132 (84.85%), Query Frame = 0 

Query: 1   MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60
           M+ + LVA+AVW  IEST SVT++QLSIL  LFGKN E+ATRI+D+ GVKKISG PSGRS
Sbjct: 1   MNVTLLVADAVWSNIESTGSVTEEQLSILQLLFGKNLEKATRIIDKRGVKKISGLPSGRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV 120
           IFQVVGES+++EEY CFP ++C CYSFFYD+V+RGE  CCKHQLAARLA+SLG   E++V
Sbjct: 61  IFQVVGESQKREEYLCFPGDYCGCYSFFYDVVSRGEHQCCKHQLAARLASSLGTYNEIEV 120

Query: 121 SDEELAILLSNL 133
           SD+ LA++LS +
Sbjct: 121 SDDHLALMLSKI 132

[Close]
BLAST of CmaCh04G004610 vs. TAIR 10
Match: AT4G33925.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: 6 growth stages; Has 106 Blast hits to 106 proteins in 53 species: Archae - 8; Bacteria - 0; Metazoa - 47; Fungi - 2; Plants - 36; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). )

HSP 1 Score: 178.3 bits (451), Expect = 4.0e-45
Identity = 83/119 (69.75%), Postives = 101/119 (84.87%), Query Frame = 0 

Query: 1   MSASTLVAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKKISGEPSGRS 60
           M+ + LVA+AVW  IEST SVT++QLSIL  LFGKN E+ATRI+D+ GVKKISG PSGRS
Sbjct: 1   MNVTLLVADAVWSNIESTGSVTEEQLSILQLLFGKNLEKATRIIDKRGVKKISGLPSGRS 60

Query: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVK 120
           IFQVVGES+++EEY CFP ++C CYSFFYD+V+RGE  CCKHQLAARLA+SLG   E++
Sbjct: 61  IFQVVGESQKREEYLCFPGDYCGCYSFFYDVVSRGEHQCCKHQLAARLASSLGTYNEIE 119

The following BLAST results are available for this feature:
BLAST of CmaCh04G004610 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh04G004610 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J6W22.9e-67100.00zinc finger SWIM domain-containing protein 7 isoform X2 OS=Cucurbita maxima OX=3... [more]
A0A6J1FSJ75.4e-6697.73zinc finger SWIM domain-containing protein 7 isoform X2 OS=Cucurbita moschata OX... [more]
A0A1S3BZP21.6e-6293.18zinc finger SWIM domain-containing protein 7 OS=Cucumis melo OX=3656 GN=LOC10349... [more]
A0A0A0KWG52.8e-6293.18SWIM-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G001010 P... [more]
A0A6J1D5Z46.2e-6291.67zinc finger SWIM domain-containing protein 7 OS=Momordica charantia OX=3673 GN=L... [more]
BLAST of CmaCh04G004610 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022983272.15.9e-67100.00zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita maxima] >XP_0... [more]
XP_022942858.11.1e-6597.73zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita moschata] >XP... [more]
KAG7030956.11.5e-6596.97Zinc finger SWIM domain-containing protein 7 [Cucurbita argyrosperma subsp. argy... [more]
KAG6600296.12.5e-6596.97Zinc finger SWIM domain-containing protein 7, partial [Cucurbita argyrosperma su... [more]
XP_023526305.15.5e-6596.21zinc finger SWIM domain-containing protein 7 isoform X2 [Cucurbita pepo subsp. p... [more]
BLAST of CmaCh04G004610 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G33925.12.7e-4968.18unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
AT4G33925.24.0e-4569.75unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR28498ZINC FINGER SWIM DOMAIN-CONTAINING PROTEIN 7coord: 2..131
IPR007527Zinc finger, SWIM-typePROSITEPS50966ZF_SWIMcoord: 62..111
score: 8.159615

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G004610.1CmaCh04G004610.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000724 double-strand break repair via homologous recombination
cellular_component GO:0097196 Shu complex
molecular_function GO:0008270 zinc ion binding