CmaCh04G004350 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G004350
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionPre-mRNA-processing protein 40A
LocationCma_Chr04: 2221369 .. 2233229 (+)
RNA-Seq ExpressionCmaCh04G004350
SyntenyCmaCh04G004350
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAATAATCCTCAATATTCAGGTTTACAGGTAAATACCTCGAAATCTATGTTCGCTTTGTAATCTAGTTTCTTTTTATTCTATCAATTTTGAAACTGGATATTTTTCATTTTGTTTCAAATTCTATTTTCTAATTGCATGTTTTATACTTCTGAAGCCCCTTCGGCCTCCTGTTGTTGGTCCTATGGATCAAGCTAGAGCCTTTGTTCCCCAAATGACTAATCAGGTAATAAGCACTTATGGCTGATGAGGATTTTATATCTTGGGTCAATCTCAAGGAATTGATGTAACTCAATTATTTATTTCAGCAGTTTCGACCAGCAGTCCCAGCACCTCACTCGCAGCAGTTTGTTCCCTTGCCCTCTTCCCATTTTCAGCCCCTTGGCCAAGGTGTTCCCATGATGAATGTTGGAATGCCCCCTCCTCCTCTAGCCCAACAACCCCAATTTTCTCAGCCAGTGGCTCACCTACCACCAAGACCCTGCGAGCCAGTTCATGGGTCATTACCACCACAAACAATTCCACTGCCAATTGCTCAGCCAAATAGGAATTTTACCCCTGAATTGCAACAAGCACAGCCTCTCACTCAACCTGCTGCTATTGGCGTGCCTGGTCCAGGTGGCTCTGGAACATCTTTATCAGCACCATACAATGTAAGTTTCATCAATTACTGGAGAACTTTTATTTGTTCTTTGTAGTACACGGAGAAGATGTGCTTAACGATAAAATGAATATTTGGCTATAAGATTCAATTGTTTTGAATTCCAAAAAAAATTCTCCAACTCTTTATGGAACATTGTCATTTTCAATAATTTTCTTGAATCTGCAACAATATATCCATTGATATCTTCTTTTACATCCTTTAATTCACTTGGAATTTTTTTCTGTGCAGTATGGACCACCTCAAAATTACAATACCCCTACCATTCATCCTCCACCCCATTCACAAGCACCAATTGTATCTTCTGGAGCTCAGCTGGGCAGTTCGGTTTCAGTCACACCTCTGAATCGCGCAAGAGAACAGCCTTATGCTACCTCCTCTATAGCTTCAGTATGTACCATTTTTTATTCTCTTTAATCTACTCTCCTATTATTGTCTTTTACTGGTTCAGTAAATTTACCTTGCATTTGCCTTTTCGTTAATTTCAGGCAGCCAATGTTCAAACGATGCCCTCTGGTGCAGCCTCATCAGAATGGAGAGAGCATACATCTGCTGACGGTAGAAGGTATTCCCCAGTTGAAACATATCCTTATGTTCTATTTTGGTTACTTGTACTCTTATATTTCTTGGACTTCACGCCCAGGTTATTTATTACACTATAAAGACCCCTCATGCAATTGCCAAGAATTTTGGATCGAGCGTTTACAGTGTAATAAATAACCTGGGTGTGAAGTCACTTCTCATTTTTCTAATATTATGCTCGAACTTTGAAGTTTTCGCACAAGATGATCGATGACAATCGTTTTTTACTATTTACCGGTTGCATTTTTCATTTTTATAATGCCAACTTCTGTTTTTCATTTTTTAGATATTATTACAACAAGAAGACCAAAATATCTAGTTGGGAAAAGCCTTTTGAATTGATGACTCCAGTAGAGGTGAGTTAAACGACAGACTTTGCTATCTTTCATAGTTCCTCAATGCTTGTAGCTTTTAATTATCTGGTTTTGCATTTTCTTACAGTCGATAAGATTTCTTCTAAAATCATGATGTTCTTACTCCAGGCATGTTATTCCATTTGCAACGATGGTACTAGTTAATTGGAATTTATTCCTGTGTTCTTTTACCTTTTTTCTTTCTTTCCTATCTTGATTTTTGATTGGCACGTGCCTTGCATTAACTGACAGAATCTTGTTTTTTTGTTCCTTAATTCCTAGTTAAAATGGGTTTACCAAATTTCTTCTGCATGCAAGGAGAATAAAAGCTATCGTCTAAGAAATTCAGTTTGTTATTAAGAAATGATCTCGATGAAATTCCCTGTCTTCTTTCTCATTGTTAGAAATTTGAATAGGATTGTTAATTAGTTGTCTAAGAGTGGTGTCTTGAGATATACTGGTATCTGTCATATGTTGTAACCTTTCTTTGTTGAAGTATAATATCTTTGCTACTTATTTTCCGTGCTGCTTTCTGTAAATGAGTTGTGTAACTTCGGTAGCTTTAAAGATGCTTACAGGTACATGCTGTGCTACTCTGTTGAGAGGTAGGATAAGCTGTCAGTCTTTGCTGCTTGCTCTCCCTATCTTTCTTGAATGTCAGTAAATTTCTGTTATTTGTGTTATTTCTTTGATCTGTAGTATAACAAGCCTTGTCCATTTATACTGTTGAATGTTTCTTCAACATTGTTATGGTTATTATGTTTACATTTGTAGGATATGTATACATATAATTATTATAACTCCACAAGGATATTCAAATGACTTTGGCATTTGCTGATGCTGAACCCATCTTTGTTTCAGTTGGACTTACATTTTTTTCCCTTTCAAATCAATGAGTTATCTGTCAGATTTCAAACTCTATTACTGGTGTCTAGTTCTATTTTGCAGATCAGATTAGCTGATGCGAAATGGAATATAAGTGGTCTAAGTAGGAATATAATGTCTTTTTTGTTACGAATTGGTCTGTTTTGCACTTGATATAATCCCATGAAATGTTGATTTTTCCCTTGCATGGTTTTTGATTTGTTCCAATTTTCTTTTATGTTCCAGAGGAGCATTTGACAATCCTTTCCGTACAGTTGGTAGTTATCAGAATTCTGGTTGTAATGGGTCTAACTGTCAGTATGATATGGATGGTTATTAGGTTTGAACGATAGATTTGGTGCCTGAACTGCCACGTTTTATCATTCCAGAATGGTTTAAGTAGAGGCTTTGTCGACTAATGAATTTGTTGCAGAATGTTCTGCGATAATCATCAATGACAAGAAACCGAACTTTTATTGAGAAAAATGAAAAGAAATGTATTCAAGCGTCCAAAAAACATCCCAGCAGGACCTTAACAAATTATAGAAACAGCATCCAATCCAAAAGAATGTTACCTAACTGACAATTACGAAAATCCTTAAATATGTTAGCCCGAACTGGTTTTGCAAACGTGTGGAAGTGTATTGAATTCTAATTACCTTTCTGAACCCATTCACTTCAGCATCTGCCTCCAGATACCCTTCTTCTGAGGTAGAACCTATAACTCTGCCTGATATAAAGTTGGTGCATTATACAAGTTTCAAGCCTTTGCATTCTTATTTCACCGCTTCCACACAAACCTAAGGGAATCTAGTTTTCTCATGAAATTTAAAACATCCCATCTTCCATCCACATTTTTGGACCACCATTGAGATAGACTCCTTGAAAAGAGCGGTGTTTAAGTCATATGTTCTCGAGCCTAAAAGGACACGGACCCCAATCATAGGTGCCCAAAGACCAGGCAAATTGATGTTTTACTAAGGTCACTACATCTTTAGTTTGCTCAAATGGCGATGAAAGTTGGACGACCTCATTACAATCCATGTTAACATGTTCACATGGCATTGAAGTTCAGAAATTTATTGTTGGTATTGATTTGTTCAGTATATATGTAGACTGGTTGGTAGAACAAGGATCAGCAAAATTGGTACTTGGAGAGTAGAACCGAGGAAAGCATGATGTGGTTAATATGCGGGTCCAACAAAGATAGAGTGACTTGAACTTTTATCGAATCTCTCTCATTCACTTAATAAGCCTGCTTTTCTGAACGTACCCCTCTCTAGATATATTAGTTATTTTCTTTTTTTAAATGAAAGAAAACCAACTTTCCTATAGAGATGAAGCTAGCAAAATACACATTTACGAAAAAAGAACTCTAGTTCCGAAGAATGAGAGATAAAATTAACCACAAAAATTCTTAGTAACTGGGTCCCTAAGGGAGTCGTTAAACCTATAGCCAAAACCCTAAACATTAAATATTATTGAAGAGTACCCTTCTCTAAACCCTAAATATTATTTCTATTAAAGCCAAAGATTATTGAAGTCATACTTTTAGTTTCACATATCACCTTTTTTTATTGTTTTTTTAAATAAGAAACAGAGGGAAAATATATTGAAAAAAGAGAGTGAAACAACCTTGAGGTGGAAGGGAGGAGACCTATGACCAAGAGCTAAATCGGAAATGCCTTTTACCACTACCAAAGATATCAAAATTGAAAAAAAAAAAAAAAAATCAGGTTCCTACAGTCGGAAATACCTTATCTTCCTGCTTTCAGCTTCTTCCTTCTTTTTGAATGATTTTATCTCAATTTTTAGTCTTCAGAATCAGACAACTCCCATGTTTTCTCTTTGGTCCTTGGCTTTAGGTGCCGTTACTCACGTAGATAGAGTATAGATATATCCTATGGTTTTGTGCTTTCCAAGTTGGTGTATTTTTGTGCTTTCCAAGTTGGTGTATTATGTGTAAGAGTTCCATGGAAAGGTCAAAAGCACCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTTCCTTGCTGATAGATTTTCATTTGCATTTCTGCTTCGTGCATACCAGCTAGGAAGCTTTATTCTACAGAGTTTTGAGGGAACAGATAAAGTTCTCTGGTGAAATACCGTCAAGGATTTACTTTTGGTAGATTTGGGTTGTTAGAAATTAATTAATTAATTATTTTTTTCTTGAAGATAAATCTAGTGACTTAGATGATGTTTGGGCTTACTGTAGTTTTGGCCCCTACTAATTTATGACTTTCTTTTGCTGAATCCCATTCAGTTTTTACGGTGCTTTTTTCAAATATTACTTCCTTTCTCAACTTTTATTCTGTGGGTGAATATCTTGACCTACACTCTCATTTTTGTGACAGAGGGCAGACGCATCAACCAACTGGAAGGAGTTCACAAGTCCTGAAGGAAGGAAGTAAACAATCTAATTCAACAAATCTAGTTGACGGCAAGGCTTTTGCATCTTGAATGAATATTTGAATCATTAACCTTATTTAATATGTGAATGTGGTACAGATATTATTATAACAAGGTCACCAAGGAATCTAAGTGGGTGATTCCCGAGGAACTGAAGGTTCGTTTAACATCTTTCTTGACTAAACATACTTGTAGCTTTTCAACTTTTAATCTTTCGGTTTAATTAATTGTTCCCCATTTGTTTTGGTGCATTGAATACATGAAGTTGGCTCGAGAGAGAGCAGAGAAGGCATCTACTCTAGGAACAGAGAAGGAACCTGTTCCTCTCGAACTCCCTTCTGTTTCTTCCCTGGAAGCACCATCTACTACTGCTGATACAATGTCAACTGCCAAAGGACTAGCATCTAGCACTTCGTCAGTAGCAGCTATCGATTTACAAAATGACAAGGACACCTCTCCTGCTGCTGTTTCAAGTGTAGAAACAAATGGAGTTCAGTCACCCGTCAATATCATTCCTTCTAGTTGCGCTATCTCAGAGAATGACAGTGCTGCTGGTGCTGTGGAGGATACTACTGTAGAACCCAGGTATTGGCAGTTATATAACTGAGCACTTTGTTTTGGTTGGTATGTAGGGTGAGTTTAGGTGACTTTTGATGGCAGTGTCTCTGTTTGCAGCATTTTCTCCTATGAACGCTTAAAGTGCTTCTTTTGTTAACACTTCATAGTATTTTTAACTAACCATATACCATGAAGCTTTTGAAAAGTGCTTTTAAAGAAAATAGTAAGAAGCATGTATTTCTTTGTAGTAGTAGGATGTACAAAAATTGAATGAAGCATGGAATTAGAGGGCTGAAGGGAAACTTACAAAAGGCCATGATAAAAATCTTCAAGGTAGTGAGCCACAATGAATGAGTGTCGTAAAATTGAGTTACACGATTGTTGATTTTTTTTAGTTGTTTGGAAGATAAAAAATTATGAAAGAATCCAACTTTAAATACTTAGGCATACCTGAAAGATACCATCAACACCATCAACATTGTTATGAAAAAAAAAAGAACATAAACAATAAACTATGCAATATTAGCTTGATTGGACCTTTCTATTGAATTTTTTTACTTTCTATGCAAATGAAGATTTATTAAATGTATAAATTATGCAGGAATGATTTGAACCAGTCTTCTGCTCAGGATACTGATAGTTTGATAGATGGCGTTTCTGCCCAAGATCTTGAGGTAGCATTTCATTCTTTTTAGTTCTTATTATGATTGGATTTATTTCTTTTTTCCCACCCATTATTGATTGTTCTTTATCATTATCAAGGAAACGAAGAAAGATATATCGGAGGAGAAAGTTGAATTTACAATGGAAGAGAGGGCTATTGATCAGGACACCTCTGCGTATCCAAATAAGCAGGTAACGATTCTTCCTAACCTATATTGTCTTTTTTCCCCACTTTCAGCTTAACTGTGTCTTTTTGATTACTTATCTTTTATGTAGGAAGCAAAAAATGCATTTAAAGCTCTCCTGGAGTCTGCCAATGTTGGCTCTGACTGGACGTGGGATCGGGTAATTGAACTAAATGTGTCCTAGTTTCTGCTGGTTTTTAAGCTCCTATCTATAATTTTTATTTTAATATGTCAGGCCATGAGAATTATAATTAATGACAAACGATATGGTGCTCTGAAAACACTTGGAGAACGGAAGCACGCTTTCAATGAGGTATGGCATGGGTCAACCGTTTCGCTCTAGTCCCGTTTTGTAACTAGGTTTTGTCTATTTAATCAGTCAATCTTGTAATGCTGTGAAATTTCTGAAAGATTCTCCTATGATGCTGGTAGTAGTGATTGTTTAAGAAGTAATCTGTGCTTTGTTGTATGTCATAGTTCCTTGGTCAAAGAAAAAAACAGGAAGTAGAGGAAAGACGAATTAAACAGAAAAAAGCGCGGGAAGAATTCAGAAAGATGCTGGAAGTATGTTTCTCCTCTCGAAGCTTGTTTGACCCTATTAATGCACAATTTTCGTATCTCTTACCTATGTATGATTCCATGCAGGAGTCAACTGAGGTGACTTCATCTATGAGATGGAGGTTGGTCTTCTACCATTTATGTTCCTTTTTTATTTTCAGCTTTGTTATCATGGGTCGTTTGTTTTCCTTGTGATTTGTGTTGGGTTATGAAAACTTTAATGAACAGCAAAGCCGAATCAATATTTGAAAATGATGAACGCTTCCTAGCAATTGAAAGAGATAGGGACCGACGTGATCTCTTTGACGGCTACTTGGAGGAACTCAAGAATAAGGTATGCATCTGTGTGCCTGCCTCCCACTTTCTACCTTTTCTACCACGTTTTTCCTTCTATGGATAAGTCCATTGGTCAGCTTTGCCTCTATTTATTTTAGCCCCATTTGTTGTGGCCTGGCTTTTTGTATGCCCGTTGAATATCCTTTAATTTTCTCTATGAAAGTCTCCTTTTCTTCTTTCAATAAAAAACTTGTTGAGGGAAATGGATTAAACACGTCAATTTGCACGTGCATGTAGCTGTATAAAGATCTTGAGTAAAATTCATTCCAAAATGGTGATTGGATTGATTAACTTTCTATGGCTTGAAATATGTTTGGTACATCATCCAGTGTTGCTGCTCGTATTTAGCACTAACCACTTCTTAGCTAGAAGCCTAACATAATTTGGTGCCAACTAAGGGTTCCGGCCCTGGTTCCATTTGTAACAACTCAAGCCCACCGCTAGCAGATATTGTCCACTTTGACCAATAACACATCGCCGTCAGCCTCACGGTTTTAAAACGCTTCTGCTAGGGAGAAGTATCATACATTTATAACGAATGTTTCGTTTTCCTCTCCCATCGATATGGAATCTCACACTTTACCTATTACCTAGCTCCTAAAACAATGTCGACATGCATGTTGGCATGTGTTAAGTAAGTAGGTCAAGCAGTAAGTAGGCTAAATAGGCACTTTCTTGCCCTGAAATCCGATAGCTAGACTATCCACTCTTCCCTTTCCCTTTCCTCTACCTGATTTTATGCTTTTAGTAAACCTAATTTCTCGGTTGAGTTGATGAACAAAAGCTGTGTTGTGGACAACGTCTCCCTCTCTCTCCCCCTCTTTTTTAATCAACAATTTTTCATTTTCATTAATATGATGATTGTTGTTGAATAGGAGCGTGCAAAAGCACAGGAGGAGCGTAGTCGGAACATTCTGGAATATAGAACATTTTTGGAATCTTGTGACTTCATTAAGGTACTCTTTTAGCTTTTTTTTTTGCACCGTCTAACAATCTATAATTTATTATTGTACTACTTTGTTGTACAAACTCAATTGAAGTGTTATGCTATGGTATTCCTCTAAGGCTAGTAGCCAGTGGCGTAAAGTACAAGACCGCTTAGTGGTTGATGAAAGATGTGCACGCCTTGAAAAAATTGATCGCTTGGAAATTTTTCAGGTAACTTTTCGCATTCTAATAATTGTACTAATGCTTGTTTGTTTGTTTATTTATTTCTTGTTTTTTTAATGAGAAACAAACTCGTTATTTTAATGAGAAAAGGAGGAACAGTCTAATGGCCTTGGGAAAGTGGATTCCTCACCCTTAAGAGAAGACACAAAAACATTATATTGTACTTTTCCTGTTTTATATTGTGAGCAGAGCTCTTATGGAAGTATATTACAGGAATACCTACGTGATTTAGAGAAGGAAGAGGAGGAGCAGAGAAAAATACAGAAGGTACGTCTGTTTGCTATATTGTTTTATATTTTTCTTTTCCTTCAAATAAGGTATTTTTTCTGAGATTTTGAGAACAACAGGAAGAACTGAGAAAAGCAGAACGTAAAAACCGTGATGAGTTCCGCAAGATGATGGAAGAACACATTGCTGCGGGGATTCTTACACCTAAAATTCATTGGCGTGACTACTGCATGAAGGTTGGCAGTCGACATTTTCCTTATTCCATTTCTTAATTGAGTTCCTTGCCCCACGATATCTTGATTCTGTCTGCTGAAGATACGCACCTCTCACCACTTCCCTCTTCGTCTCAGGTTAAAGAGTTGCCTGCATATTTGGCAGTTGCTGCAAATACATCTGGTTCAACTCCAAAGAATTTGTTTGAAGATGTTGCAGACGAGATCCAAAAACAAGTTAATCCTCTATATCTCTTGATCTCTTCTTGATTACCTGACAGACATTCTCATTAAAAATGTTGTGATTTCTTGACGCTTATATTGATTTGGTTAAGGTGATTGCGATAGGAGTAGTTAATTTGTTGAAAGTTAGTCTCGAGTGCACTCACAAGGGGTGTGTCCAAATACTTTGAAGGGAGTTAATTGTGCATTCTTATCTTTCATCTCAATTCTTTGGCTCCTGACTAAGACGTTTGAAAGTTAGAATTACAATTATCCTTATGTTTGAAATGCTATGTTCCATTACTGATCTTGTAAAGTAGGGTGTTTTCCTCATGAAATCTCCCTGTACTAATTTCTATTTTTAGCTGTATTATCTGCGACCCCATGCCTAAATACATCTCTATACTTTTCTGATGATTTTACTTTTGTGGTTATTGCAAGTCTTTCCGGGTCACTGTACTCGTGATATAACTTTCCTGCCTCCACTTCCGCATTGATGAAATGCTGTTCTATTGAGGCTGATTTGATATTTTTTTTTTGGGGCCGGTATTTTTGCAGTATCGTGATGATAAAACGAGAATAAAAGATGCTTTGAAGCTGAGAAAGGTATTATCGGTCTGCATAAGCTTTTTTTTTTTTCCTTGTCCATCACTGGTAGCTTGTATACCTAATCTCAATCTCTTGGGACCATCAGATTGTAATGTCATTGTCATGGACACTTGACGACTTTAAAGCTGCCATTTCAAAAGATATCAGCAATCCTCCAATATCAGACAGCAACTTAAAGGTACTTTTTCAGGCCTACTCTTTCTTGTTCTTGATGGAGTCTAGCAACCTACAAAAGATCTAGCCTTTTTATGAATGTGGTCTGAGTGATAGTCTTGAGTGCTTTTCACGTAGCTTGTTTGGTTGAATAAGTGATTGGCCTTTAGTGATGGTCTAGGTGTCTCAGGTTGGGATTCTGATCTTGTAAGGTGATCTGTTCTCAATGTCATACAGGTGGCTGGAGGAGCCTTCTCTTTCTATGAATGTTTGTTTATAATACGGTGATACATGTTGGATATCTAGTATCTATAGTATAGACTGTCCTTGTATTGAATTAGAGATGCATTCGCTGATAATTAGAAGAGACCTCAATGCTTATATAAGCTTGTATTTGATCTTTTACGTGATAAATTCTTTGTATTAGATACCCTCATCTTATACTCATAAAAATTTATTAATGACTTGAAGTACTTTCTATATCGTTCACATGTTCTTTCTCATGTGCTCCTCTTTTAATCATGCAATGACTTGGTTTGCAGCTAATTTTTGATGAATTGCTCGAACGGGCCAGGGAGAAGGAGGAGAAAGAAGCTAAGAAGCGTAAACGTCTTGGAGATGATTTTTTTAGTCTTTTATGTTCGTTTAAGGTTTGTTACTTCAATGCCAGTTTGTACCTTAGTTACATAAGATTAACCGAGTAAATGAGTTGGTCTTTTTTTTTTTTTTTTGCATTGTTGTAGGAAATATCTGTATATTCAAATTGGGAAGACAGCAAACTCCTTTTTGAAGGAAGCCAAGAGTACAGGTATTCCTTGTTGTCAACATGTTATTTCATATCATATAGTTTGTTTTAAAGCTTAGACCTCTCAAACAAAAACAACACTAAGCGAAAGGAGGACGACTTGTGATTGAATTTAATTTTTTTTAGTTCGATCGAGGACGAGAGCTTCTGTAAGGAAATATTTGAGGAGTACATTGCACAACTGAAAGAACATGCAAAAGAAAACGACACTAAGCGAAAGGAGGAAAAGGTATGAATTTTGTTGTCTATTAGTTATTGAAAATATAAGCAGTGAAGTATATGATAATTTGCCCAGAACTTCATGTTTATGCTTGTTATGTTTTATCCTGAGGCGTGTGAAATTGACCATCAACACTCAACTTTTCGCCGTGCCCACATGCATGATATCATTTAATATGATGTCGATCTTATGAATTTCTTCACCAATTTGATAGGCAAGAAAGGAAAAAGACAAGGAGGAAAGAGATAGAAGGAAGGAGAAACACAGAAAAAGCGAAAGAGAAAAGGAAAGGGAAAAGGAGGAGAACTCGAAGAAAGATGGAGTAGACAATGAAAATGCTGATGGTTCGGATACCCTTGAATCGAAAGAGAACAGGAGACTGGGGAAAGAACGTAGTAAGAAACAAAGAAAGAGACGGTATAGCGATGAGGAATATTCAGACGAAGATGAAGCAGGTCATGATCGATCGAAGAAATCCCAATCGCATAAAGACCGGAAGAAATCTAGGCGGGTACGTTCCTTTTTCTTTCCCATCACAGTATACTTGTTTCTCTCTTAATACCAATGTCGTTTAATTCTATGCCTCCTTATTCGTGGTGTTGTGGCCTCGCATTTGATTTTATAGCATGCATCTGCTCATGACTCGGATGGTGAAAGCAGACATAGAAGGCACAAGAGAGAACATCGAAATGGTTCGTCTAAGAATTTTGACCACGAGGAGCTTGAAGACGGGGAATGTGGTGACGACGGGGCAAGTAGGTAGTTTTTTTACTCCTATATTAACTATTAGTGGGATTTTTATTAACCTAAAATATTTGATGATGTTTAAATCCTTTTTTGGCTTTGTGTATACACTAATTTATTGTCAATAAGCTGTCTCTGTTGGTCACAAACGTATTTTATGCCTGGATTTTCATTTTAAGATAGTAGACCCTTTGTATTGAATTGAAGAGAAAGCTATAACTTTGAAGTTGGGGACTAGAGCAGGATGGTACACTTCAGACGAACTTAAGAAGAAAATTGCTTCCGTCCTTTATTGTCTGCCC

mRNA sequence

ATGGCCAATAATCCTCAATATTCAGGTTTACAGCCCCTTCGGCCTCCTGTTGTTGGTCCTATGGATCAAGCTAGAGCCTTTGTTCCCCAAATGACTAATCAGCAGTTTCGACCAGCAGTCCCAGCACCTCACTCGCAGCAGTTTGTTCCCTTGCCCTCTTCCCATTTTCAGCCCCTTGGCCAAGGTGTTCCCATGATGAATGTTGGAATGCCCCCTCCTCCTCTAGCCCAACAACCCCAATTTTCTCAGCCAGTGGCTCACCTACCACCAAGACCCTGCGAGCCAGTTCATGGGTCATTACCACCACAAACAATTCCACTGCCAATTGCTCAGCCAAATAGGAATTTTACCCCTGAATTGCAACAAGCACAGCCTCTCACTCAACCTGCTGCTATTGGCGTGCCTGGTCCAGGTGGCTCTGGAACATCTTTATCAGCACCATACAATTATGGACCACCTCAAAATTACAATACCCCTACCATTCATCCTCCACCCCATTCACAAGCACCAATTGTATCTTCTGGAGCTCAGCTGGGCAGTTCGGTTTCAGTCACACCTCTGAATCGCGCAAGAGAACAGCCTTATGCTACCTCCTCTATAGCTTCAGCAGCCAATGTTCAAACGATGCCCTCTGGTGCAGCCTCATCAGAATGGAGAGAGCATACATCTGCTGACGGTAGAAGATATTATTACAACAAGAAGACCAAAATATCTAGTTGGGAAAAGCCTTTTGAATTGATGACTCCAGTAGAGAGGGCAGACGCATCAACCAACTGGAAGGAGTTCACAAGTCCTGAAGGAAGGAAATATTATTATAACAAGGTCACCAAGGAATCTAAGTGGGTGATTCCCGAGGAACTGAAGTTGGCTCGAGAGAGAGCAGAGAAGGCATCTACTCTAGGAACAGAGAAGGAACCTGTTCCTCTCGAACTCCCTTCTGTTTCTTCCCTGGAAGCACCATCTACTACTGCTGATACAATGTCAACTGCCAAAGGACTAGCATCTAGCACTTCGTCAGTAGCAGCTATCGATTTACAAAATGACAAGGACACCTCTCCTGCTGCTGTTTCAAGTGTAGAAACAAATGGAGTTCAGTCACCCGTCAATATCATTCCTTCTAGTTGCGCTATCTCAGAGAATGACAGTGCTGCTGGTGCTGTGGAGGATACTACTGTAGAACCCAGGAATGATTTGAACCAGTCTTCTGCTCAGGATACTGATAGTTTGATAGATGGCGTTTCTGCCCAAGATCTTGAGGAAACGAAGAAAGATATATCGGAGGAGAAAGTTGAATTTACAATGGAAGAGAGGGCTATTGATCAGGACACCTCTGCGTATCCAAATAAGCAGGAAGCAAAAAATGCATTTAAAGCTCTCCTGGAGTCTGCCAATGTTGGCTCTGACTGGACGTGGGATCGGGCCATGAGAATTATAATTAATGACAAACGATATGGTGCTCTGAAAACACTTGGAGAACGGAAGCACGCTTTCAATGAGTTCCTTGGTCAAAGAAAAAAACAGGAAGTAGAGGAAAGACGAATTAAACAGAAAAAAGCGCGGGAAGAATTCAGAAAGATGCTGGAAGAGTCAACTGAGGTGACTTCATCTATGAGATGGAGCAAAGCCGAATCAATATTTGAAAATGATGAACGCTTCCTAGCAATTGAAAGAGATAGGGACCGACGTGATCTCTTTGACGGCTACTTGGAGGAACTCAAGAATAAGGAGCGTGCAAAAGCACAGGAGGAGCGTAGTCGGAACATTCTGGAATATAGAACATTTTTGGAATCTTGTGACTTCATTAAGGCTAGTAGCCAGTGGCGTAAAGTACAAGACCGCTTAGTGGTTGATGAAAGATGTGCACGCCTTGAAAAAATTGATCGCTTGGAAATTTTTCAGGAATACCTACGTGATTTAGAGAAGGAAGAGGAGGAGCAGAGAAAAATACAGAAGGAAGAACTGAGAAAAGCAGAACGTAAAAACCGTGATGAGTTCCGCAAGATGATGGAAGAACACATTGCTGCGGGGATTCTTACACCTAAAATTCATTGGCGTGACTACTGCATGAAGGTTAAAGAGTTGCCTGCATATTTGGCAGTTGCTGCAAATACATCTGGTTCAACTCCAAAGAATTTGTTTGAAGATGTTGCAGACGAGATCCAAAAACAATATCGTGATGATAAAACGAGAATAAAAGATGCTTTGAAGCTGAGAAAGATTGTAATGTCATTGTCATGGACACTTGACGACTTTAAAGCTGCCATTTCAAAAGATATCAGCAATCCTCCAATATCAGACAGCAACTTAAAGCTAATTTTTGATGAATTGCTCGAACGGGCCAGGGAGAAGGAGGAGAAAGAAGCTAAGAAGCGTAAACGTCTTGGAGATGATTTTTTTAGTCTTTTATGTTCGTTTAAGGAAATATCTGTATATTCAAATTGGGAAGACAGCAAACTCCTTTTTGAAGGAAGCCAAGAGTACAGTTCGATCGAGGACGAGAGCTTCTGTAAGGAAATATTTGAGGAGTACATTGCACAACTGAAAGAACATGCAAAAGAAAACGACACTAAGCGAAAGGAGGAAAAGGCAAGAAAGGAAAAAGACAAGGAGGAAAGAGATAGAAGGAAGGAGAAACACAGAAAAAGCGAAAGAGAAAAGGAAAGGGAAAAGGAGGAGAACTCGAAGAAAGATGGAGTAGACAATGAAAATGCTGATGGTTCGGATACCCTTGAATCGAAAGAGAACAGGAGACTGGGGAAAGAACGTAGTAAGAAACAAAGAAAGAGACGGTATAGCGATGAGGAATATTCAGACGAAGATGAAGCAGGTCATGATCGATCGAAGAAATCCCAATCGCATAAAGACCGGAAGAAATCTAGGCGGCATGCATCTGCTCATGACTCGGATGGTGAAAGCAGACATAGAAGGCACAAGAGAGAACATCGAAATGGTTCGTCTAAGAATTTTGACCACGAGGAGCTTGAAGACGGGGAATGTGGTGACGACGGGGCAAGTAGGTAGTTTTTTTACTCCTATATTAACTATTAGTGGGATTTTTATTAACCTAAAATATTTGATGATGTTTAAATCCTTTTTTGGCTTTGTGTATACACTAATTTATTGTCAATAAGCTGTCTCTGTTGGTCACAAACGTATTTTATGCCTGGATTTTCATTTTAAGATAGTAGACCCTTTGTATTGAATTGAAGAGAAAGCTATAACTTTGAAGTTGGGGACTAGAGCAGGATGGTACACTTCAGACGAACTTAAGAAGAAAATTGCTTCCGTCCTTTATTGTCTGCCC

Coding sequence (CDS)

ATGGCCAATAATCCTCAATATTCAGGTTTACAGCCCCTTCGGCCTCCTGTTGTTGGTCCTATGGATCAAGCTAGAGCCTTTGTTCCCCAAATGACTAATCAGCAGTTTCGACCAGCAGTCCCAGCACCTCACTCGCAGCAGTTTGTTCCCTTGCCCTCTTCCCATTTTCAGCCCCTTGGCCAAGGTGTTCCCATGATGAATGTTGGAATGCCCCCTCCTCCTCTAGCCCAACAACCCCAATTTTCTCAGCCAGTGGCTCACCTACCACCAAGACCCTGCGAGCCAGTTCATGGGTCATTACCACCACAAACAATTCCACTGCCAATTGCTCAGCCAAATAGGAATTTTACCCCTGAATTGCAACAAGCACAGCCTCTCACTCAACCTGCTGCTATTGGCGTGCCTGGTCCAGGTGGCTCTGGAACATCTTTATCAGCACCATACAATTATGGACCACCTCAAAATTACAATACCCCTACCATTCATCCTCCACCCCATTCACAAGCACCAATTGTATCTTCTGGAGCTCAGCTGGGCAGTTCGGTTTCAGTCACACCTCTGAATCGCGCAAGAGAACAGCCTTATGCTACCTCCTCTATAGCTTCAGCAGCCAATGTTCAAACGATGCCCTCTGGTGCAGCCTCATCAGAATGGAGAGAGCATACATCTGCTGACGGTAGAAGATATTATTACAACAAGAAGACCAAAATATCTAGTTGGGAAAAGCCTTTTGAATTGATGACTCCAGTAGAGAGGGCAGACGCATCAACCAACTGGAAGGAGTTCACAAGTCCTGAAGGAAGGAAATATTATTATAACAAGGTCACCAAGGAATCTAAGTGGGTGATTCCCGAGGAACTGAAGTTGGCTCGAGAGAGAGCAGAGAAGGCATCTACTCTAGGAACAGAGAAGGAACCTGTTCCTCTCGAACTCCCTTCTGTTTCTTCCCTGGAAGCACCATCTACTACTGCTGATACAATGTCAACTGCCAAAGGACTAGCATCTAGCACTTCGTCAGTAGCAGCTATCGATTTACAAAATGACAAGGACACCTCTCCTGCTGCTGTTTCAAGTGTAGAAACAAATGGAGTTCAGTCACCCGTCAATATCATTCCTTCTAGTTGCGCTATCTCAGAGAATGACAGTGCTGCTGGTGCTGTGGAGGATACTACTGTAGAACCCAGGAATGATTTGAACCAGTCTTCTGCTCAGGATACTGATAGTTTGATAGATGGCGTTTCTGCCCAAGATCTTGAGGAAACGAAGAAAGATATATCGGAGGAGAAAGTTGAATTTACAATGGAAGAGAGGGCTATTGATCAGGACACCTCTGCGTATCCAAATAAGCAGGAAGCAAAAAATGCATTTAAAGCTCTCCTGGAGTCTGCCAATGTTGGCTCTGACTGGACGTGGGATCGGGCCATGAGAATTATAATTAATGACAAACGATATGGTGCTCTGAAAACACTTGGAGAACGGAAGCACGCTTTCAATGAGTTCCTTGGTCAAAGAAAAAAACAGGAAGTAGAGGAAAGACGAATTAAACAGAAAAAAGCGCGGGAAGAATTCAGAAAGATGCTGGAAGAGTCAACTGAGGTGACTTCATCTATGAGATGGAGCAAAGCCGAATCAATATTTGAAAATGATGAACGCTTCCTAGCAATTGAAAGAGATAGGGACCGACGTGATCTCTTTGACGGCTACTTGGAGGAACTCAAGAATAAGGAGCGTGCAAAAGCACAGGAGGAGCGTAGTCGGAACATTCTGGAATATAGAACATTTTTGGAATCTTGTGACTTCATTAAGGCTAGTAGCCAGTGGCGTAAAGTACAAGACCGCTTAGTGGTTGATGAAAGATGTGCACGCCTTGAAAAAATTGATCGCTTGGAAATTTTTCAGGAATACCTACGTGATTTAGAGAAGGAAGAGGAGGAGCAGAGAAAAATACAGAAGGAAGAACTGAGAAAAGCAGAACGTAAAAACCGTGATGAGTTCCGCAAGATGATGGAAGAACACATTGCTGCGGGGATTCTTACACCTAAAATTCATTGGCGTGACTACTGCATGAAGGTTAAAGAGTTGCCTGCATATTTGGCAGTTGCTGCAAATACATCTGGTTCAACTCCAAAGAATTTGTTTGAAGATGTTGCAGACGAGATCCAAAAACAATATCGTGATGATAAAACGAGAATAAAAGATGCTTTGAAGCTGAGAAAGATTGTAATGTCATTGTCATGGACACTTGACGACTTTAAAGCTGCCATTTCAAAAGATATCAGCAATCCTCCAATATCAGACAGCAACTTAAAGCTAATTTTTGATGAATTGCTCGAACGGGCCAGGGAGAAGGAGGAGAAAGAAGCTAAGAAGCGTAAACGTCTTGGAGATGATTTTTTTAGTCTTTTATGTTCGTTTAAGGAAATATCTGTATATTCAAATTGGGAAGACAGCAAACTCCTTTTTGAAGGAAGCCAAGAGTACAGTTCGATCGAGGACGAGAGCTTCTGTAAGGAAATATTTGAGGAGTACATTGCACAACTGAAAGAACATGCAAAAGAAAACGACACTAAGCGAAAGGAGGAAAAGGCAAGAAAGGAAAAAGACAAGGAGGAAAGAGATAGAAGGAAGGAGAAACACAGAAAAAGCGAAAGAGAAAAGGAAAGGGAAAAGGAGGAGAACTCGAAGAAAGATGGAGTAGACAATGAAAATGCTGATGGTTCGGATACCCTTGAATCGAAAGAGAACAGGAGACTGGGGAAAGAACGTAGTAAGAAACAAAGAAAGAGACGGTATAGCGATGAGGAATATTCAGACGAAGATGAAGCAGGTCATGATCGATCGAAGAAATCCCAATCGCATAAAGACCGGAAGAAATCTAGGCGGCATGCATCTGCTCATGACTCGGATGGTGAAAGCAGACATAGAAGGCACAAGAGAGAACATCGAAATGGTTCGTCTAAGAATTTTGACCACGAGGAGCTTGAAGACGGGGAATGTGGTGACGACGGGGCAAGTAGGTAG

Protein sequence

MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLGQGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPELQQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGAQLGSSVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSWEKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTLGTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVETNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEETKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIINDKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWSKAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDFIKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERKNRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEIQKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERAREKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIFEEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVDNENADGSDTLESKENRRLGKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSRRHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR
Homology
[Close]
BLAST of CmaCh04G004350 vs. ExPASy Swiss-Prot
Match: B6EUA9 (Pre-mRNA-processing protein 40A OS=Arabidopsis thaliana OX=3702 GN=PRP40A PE=1 SV=1)

HSP 1 Score: 746.9 bits (1927), Expect = 3.0e-214
Identity = 489/995 (49.15%), Postives = 657/995 (66.03%), Query Frame = 0 

Query: 29   PQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLGQGVPMMNVGMPPPPLAQQPQFSQPVAH- 88
            PQ +  QFRP VP    Q FVP  S  F P G         +PP   +Q PQ+SQP+   
Sbjct: 6    PQSSGTQFRPMVPGQQGQHFVPAASQPFHPYGH--------VPPNVQSQPPQYSQPIQQQ 65

Query: 89   --LPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPELQQAQPLTQPAAIGVPGPGGSGTSLS 148
               P RP +PVH +   Q + +P  Q N+  T    Q QP   P    + G   SG   S
Sbjct: 66   QLFPVRPGQPVHITSSSQAVSVPYIQTNKILTSGSTQPQPNAPP----MTGFATSGPPFS 125

Query: 149  APYNYGP---PQNYNTPTIHPPPHSQAPIVSSGAQLGSSVSVTPLNRARE--QPYATSSI 208
            +PY + P   PQ    PT    P+SQ  +  +G    ++    P+N++     P   +  
Sbjct: 126  SPYTFVPSSYPQ--QQPTSLVQPNSQMHV--AGVPPAANTWPVPVNQSTSLVSPVQQTGQ 185

Query: 209  ASAANVQTMPSG---AASSEWREHTSADGRRYYYNKKTKISSWEKPFELMTPVERADAST 268
             +   V T P      ++S+W+EHTSADGR+YYYNK+TK S+WEKP ELMTP+ERADAST
Sbjct: 186  QTPVAVSTDPGNLTPQSASDWQEHTSADGRKYYYNKRTKQSNWEKPLELMTPLERADAST 245

Query: 269  NWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKAS--TLGTEKEPVPLELPSVS 328
             WKEFT+PEG+KYYYNKVTKESKW IPE+LKLARE+A+ AS  T  +E    PL      
Sbjct: 246  VWKEFTTPEGKKYYYNKVTKESKWTIPEDLKLAREQAQLASEKTSLSEAGSTPL------ 305

Query: 329  SLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVETNGVQSPVNIIPSSC 388
            S  A S++   +ST   +  STSS           +SP         G+  PV   PS  
Sbjct: 306  SHHAASSSDLAVSTVTSVVPSTSSAL-----TGHSSSPIQA------GLAVPVTRPPSVA 365

Query: 389  AISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEETKKDIS-EEKVEFT- 448
             ++    A    E TT++  N L+   A D++   DG +AQ+ E   K++S   K   + 
Sbjct: 366  PVTPTSGAISDTEATTIKGDN-LSSRGADDSN---DGATAQNNEAENKEMSVNGKANLSP 425

Query: 449  MEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIINDKRYGALKTLGER 508
              ++A  ++   Y  KQEAK AFK+LLES NV SDWTW++ ++ I++DKRYGAL+TLGER
Sbjct: 426  AGDKANVEEPMVYATKQEAKAAFKSLLESVNVHSDWTWEQTLKEIVHDKRYGALRTLGER 485

Query: 509  KHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWSKAESIFENDERFL 568
            K AFNE+LGQRKK E EERR +QKKAREEF KMLEE  E++SS++WSKA S+FEND+RF 
Sbjct: 486  KQAFNEYLGQRKKVEAEERRRRQKKAREEFVKMLEECEELSSSLKWSKAMSLFENDQRFK 545

Query: 569  AIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDFIKASSQWRKVQDR 628
            A++R RDR DLFD Y+ EL+ KER KA EE  + + +YR FLE+CD+IKA +QWRK+QDR
Sbjct: 546  AVDRPRDREDLFDNYIVELERKEREKAAEEHRQYMADYRKFLETCDYIKAGTQWRKIQDR 605

Query: 629  LVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERKNRDEFRKMMEEHI 688
            L  D+RC+ LEKIDRL  F+EY+ DLEKEEEE ++++KE +R+AERKNRD FR ++EEH+
Sbjct: 606  LEDDDRCSCLEKIDRLIGFEEYILDLEKEEEELKRVEKEHVRRAERKNRDAFRTLLEEHV 665

Query: 689  AAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEIQKQYRDDKTRIKD 748
            AAGILT K +W DYC+++K+LP Y AVA+NTSGSTPK+LFEDV +E++KQY +DK+ +KD
Sbjct: 666  AAGILTAKTYWLDYCIELKDLPQYQAVASNTSGSTPKDLFEDVTEELEKQYHEDKSYVKD 725

Query: 749  ALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERAREKEEKEAKKRKR 808
            A+K RKI M  SW  +DFK+AIS+D+S   ISD NLKLI+D+L+ R +EKEEKEA+K +R
Sbjct: 726  AMKSRKISMVSSWLFEDFKSAISEDLSTQQISDINLKLIYDDLVGRVKEKEEKEARKLQR 785

Query: 809  LGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIFEEYIAQLKEHAKE 868
            L ++F +LL +FKEI+V SNWEDSK L E SQEY SI DES  + +FEEYI  L+E AKE
Sbjct: 786  LAEEFTNLLHTFKEITVASNWEDSKQLVEESQEYRSIGDESVSQGLFEEYITSLQEKAKE 845

Query: 869  NDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVDNENADGSDTLE-- 928
             + KR EEK RKEK+++E+++RK+K  K  REKERE+E+   K+    E +DG   ++  
Sbjct: 846  KERKRDEEKVRKEKERDEKEKRKDKD-KERREKEREREKEKGKERSKREESDGETAMDVS 905

Query: 929  --SKENRRLGKERSKKQRKRRY--SDEEYSDEDEAGHDRSKKSQSH-KDRKKSRRHASAH 988
               K+ +R GK+R +K R+R +  SDE+ S + +   +  K S+ H  DRKKSR+HA++ 
Sbjct: 906  EGHKDEKRKGKDRDRKHRRRHHNNSDEDVSSDRDDRDESKKSSRKHGNDRKKSRKHANSP 958

Query: 989  DSDGESRHRRHKREHRNGSSKNFDHEELEDGECGD 1002
            +S+ E+RH+R K+E    SS+   ++ELEDGE G+
Sbjct: 966  ESESENRHKRQKKE----SSRRSGNDELEDGEVGE 958

[Close]
BLAST of CmaCh04G004350 vs. ExPASy Swiss-Prot
Match: F4JCC1 (Pre-mRNA-processing protein 40B OS=Arabidopsis thaliana OX=3702 GN=PRP40B PE=1 SV=1)

HSP 1 Score: 671.8 bits (1732), Expect = 1.2e-191
Identity = 465/1026 (45.32%), Postives = 642/1026 (62.57%), Query Frame = 0 

Query: 1    MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG 60
            MANN QY G+QP + P    +D  R F P M N QF P + AP S+Q   L S +FQ +G
Sbjct: 1    MANNHQYPGIQPFQHPNASSIDLPRGFAPPM-NFQFLPTIQAPQSEQVARLSSQNFQCVG 60

Query: 61   QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL 120
            +G  ++++G PP   A Q   S   +H  P     V     P   P  I+QPN +     
Sbjct: 61   RGGTVLSIGYPPQSYAPQLLQSMHHSHERPSQLNQVQVQHVPLGPPTLISQPNVSIASGT 120

Query: 121  QQAQPLTQPAAIGVPGPGGSGTSLSAPY------NYGPPQNYNTPTIHPPPHSQAPIVSS 180
               QP  Q   IG+PG GG     S P       +  PPQ    P+IH     +A I+ +
Sbjct: 121  SLHQPYVQTPDIGMPGFGGPRALFSYPSATSYEGSRVPPQ-VTGPSIHSQAQQRASIIHT 180

Query: 181  GAQLGSSVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKK 240
             A+  SS+    +N   EQP        AA ++ +PS  A ++W EHTSADGR+Y++NK+
Sbjct: 181  SAE--SSI----MNPTFEQP-------KAAFLKPLPSQKALTDWVEHTSADGRKYFFNKR 240

Query: 241  TKISSWEKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERA 300
            TK S+WEKP ELMT  ERADA T+WKE +SP+GRKYYYNK+TK+S W +PEE+K+ RE+A
Sbjct: 241  TKKSTWEKPVELMTLFERADARTDWKEHSSPDGRKYYYNKITKQSTWTMPEEMKIVREQA 300

Query: 301  EKASTLGTEKEPVPLELPSVSSLEAPSTTADTMSTA--KGLASSTSS---VAAIDLQND- 360
            E AS  G   E        +       T +DT STA   GL S TS+   V  + L +D 
Sbjct: 301  EIASVQGPHAE-------GIIDASEVLTRSDTASTAAPTGLPSQTSTSEGVEKLTLTSDL 360

Query: 361  --KDTSPAAVSSVE-TNGVQSPVNIIPSSCAISENDSAAGAVEDT---TVEPRNDLNQSS 420
                + P + S VE  + VQ   +     C  SE D  +  V +T   T+  +++++  +
Sbjct: 361  KQPASVPGSSSPVENVDRVQMSADETSQLCDTSETDGLSVPVTETSAATLVEKDEISVGN 420

Query: 421  AQDTDSLI-----DGVSAQDLEETKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFK 480
            + D+D +       G  +   E  K  +  EKVE   EE+ I Q++ ++ NK EA + FK
Sbjct: 421  SGDSDDMSTKNANQGSGSGPKESQKPMVESEKVESQTEEKQIHQESFSFNNKLEAVDVFK 480

Query: 481  ALLESANVGSDWTWDRAMRIIINDKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQK 540
            +LL+SA VGSDWTW++AMR IINDKRYGAL+TLGERK AFNEFL Q K+   EER  +QK
Sbjct: 481  SLLKSAKVGSDWTWEQAMREIINDKRYGALRTLGERKQAFNEFLLQTKRAAEEERLARQK 540

Query: 541  KAREEFRKMLEESTEVTSSMRWSKAESIFENDERFLAIERDRDRRDLFDGYLEELKNKER 600
            K  E+F++MLEE  E+T S RWSK  ++FE+DERF A+ER++DRR++F+ ++ ELK K R
Sbjct: 541  KLYEDFKRMLEECVELTPSTRWSKTVTMFEDDERFKALEREKDRRNIFEDHVSELKEKGR 600

Query: 601  AKAQEERSRNILEYRTFLESCDFIKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLR 660
             KA E+R RNI+EY+ FLESC+FIK +SQWRKVQDRL VDERC+RLEKID+LEIFQEYLR
Sbjct: 601  VKALEDRKRNIIEYKRFLESCNFIKPNSQWRKVQDRLEVDERCSRLEKIDQLEIFQEYLR 660

Query: 661  DLEKEEEEQRKIQKEELRKAERKNRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAY 720
            DLE+EEEE++KIQKEEL+K ERK+RDEF  +++EHIA G LT K  WRDY MKVK+LP Y
Sbjct: 661  DLEREEEEKKKIQKEELKKVERKHRDEFHGLLDEHIATGELTAKTIWRDYLMKVKDLPVY 720

Query: 721  LAVAANTSGSTPKNLFEDVADEIQKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISK 780
             A+A+N+SG+TPK+LFED  ++++K+  + K++IKD LKLRK+ +S   T D+FK +IS+
Sbjct: 721  SAIASNSSGATPKDLFEDAVEDLKKRDHELKSQIKDVLKLRKVNLSAGSTFDEFKVSISE 780

Query: 781  DISNPPISDSNLKLIFDELLERAREKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDS 840
            DI  P I D  LKL+FD+LLERA+EKEEKEA+K+ R  +    +L SFK+I+  S+WE+ 
Sbjct: 781  DIGFPLIPDVRLKLVFDDLLERAKEKEEKEARKQTRQTEKLVDMLRSFKDITASSSWEEL 840

Query: 841  KLLFEGSQEYSSIEDESFCKEIFEEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKE 900
            K L EGS++ S+I DESF K  FE+Y++ LKE +     + K+ K   E  +EE D+ ++
Sbjct: 841  KHLVEGSEKCSTIGDESFRKRCFEDYVSLLKEQS----NRIKQNKKVPEDVREEHDKGRD 900

Query: 901  KH-RKSEREKEREKEENSKKDGVDNENADGSDTLESKENRRLGKERSKKQRKRRYSDEEY 960
            K+ R+ +R +ER+ +++ KK      N D ++    KE RR G++   + R+R  S +E 
Sbjct: 901  KYGREKDRVRERDSDDHHKKGAAGKYNHDMNEP-HGKERRRSGRDSHNRHRERHTSVKE- 960

Query: 961  SDEDEAGHDRSKKSQSHKDRKKSRRHASAHDSDGESRHRRHK--REHRNGSSKNFDHEEL 1001
             ++ +   +  K    HK  +  R   S  + +G+ + RR +  REH          EEL
Sbjct: 961  -NDTDHFKESHKAGGGHKKSRHQRGWVSEAEVEGKEKRRRKEEAREHTK-------EEEL 990

[Close]
BLAST of CmaCh04G004350 vs. ExPASy Swiss-Prot
Match: Q9R1C7 (Pre-mRNA-processing factor 40 homolog A OS=Mus musculus OX=10090 GN=Prpf40a PE=1 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-67
Identity = 274/878 (31.21%), Postives = 438/878 (49.89%), Query Frame = 0 

Query: 159 PTIHPPPHSQAPIVSSGAQLGSSVSVTPLNRAREQPYATSSIASAANVQTMPSGAAS--- 218
           P +  PP  Q P + S    G  +S   +++A  QP    ++    N   + +GAAS   
Sbjct: 90  PPMGGPPMGQMPGMMSSVMSGMMMS--HMSQASMQP----ALPPGVNSMDVAAGAASGAK 149

Query: 219 SEWREHTSADGRRYYYNKKTKISSWEKPFELMTPVERADASTNWKEFTSPEGRKYYYNKV 278
           S W EH S DGR YYYN +TK S+WEKP +L TP E+  +   WKE+ S  G+ YYYN  
Sbjct: 150 SMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQ 209

Query: 279 TKESKWVIPEEL-----------------KLARERAEKASTLGTEKEPVPLELPSVSSLE 338
           TKES+W  P+EL                 K       KA     ++E        V + E
Sbjct: 210 TKESRWAKPKELEDLEGYQNTIVAGGLITKSNLHAMIKAEESSKQEECTTASTAPVPTTE 269

Query: 339 APSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVETNGVQSPVNIIPSSCAIS 398
            P TT  TM+ A+  A+  ++ AA     + +TS    ++V +  V     +        
Sbjct: 270 IP-TTMSTMAAAEAAAAVVAAAAAAAAAANANTSTTPTNTVGSVPVAPEPEVTSIVATAV 329

Query: 399 ENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQD--LEETKKDISEEKVEFTMEE 458
           +N++    V  +T E     N ++ QD    I   + ++   +ET  D + +K E   EE
Sbjct: 330 DNEN---TVTVSTEEQAQLANTTAIQDLSGDISSNTGEEPAKQETVSDFTPKKEE---EE 389

Query: 459 RAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIINDKRYGALKTLGERKHA 518
               + T  +  K+EAK AFK LL+   V S+ +W++AM++IIND RY AL  L E+K A
Sbjct: 390 SQPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQA 449

Query: 519 FNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWSKAESIFENDERFLAIE 578
           FN +  Q +K+E EE R K K+A+E F++ LE   ++TS+ R+ KAE +F   E + AI 
Sbjct: 450 FNAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAIS 509

Query: 579 RDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDFIKASSQWRKVQDRLV- 638
            +RDR ++++  L  L  KE+ +A++ R RN    +  L++   +  S+ W + Q  L+ 
Sbjct: 510 -ERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMD 569

Query: 639 -----VDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERKNRDEFRKMME 698
                 DE    ++K D L  F+E++R LEKEEEE+++      R+ +RKNR+ F+  ++
Sbjct: 570 NPTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKTLLRERRRQRKNRESFQIFLD 629

Query: 699 EHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEIQKQYRDDKTR 758
           E    G L     W +    +     +  +     GST  +LF+   ++++ +Y D+K  
Sbjct: 630 ELHEHGQLHSMSSWMELYPTISSDIRFTNMLGQ-PGSTALDLFKFYVEDLKARYHDEKKI 689

Query: 759 IKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA----REKEEK 818
           IKD LK +  V+ ++ T +DF A IS    +  +   N+KL F+ LLE+A    RE+E++
Sbjct: 690 IKDILKDKGFVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKE 749

Query: 819 EAKKRKRLGDDFFSLL-CSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIFEEYIA 878
           EA+K KR    F S+L  +   I + + WED +  F     +  I  ES  K IF++++ 
Sbjct: 750 EARKMKRKESAFKSMLKQATPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFM- 809

Query: 879 QLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKK--DGVDNEN 938
               H  E++ +    K +K   K ++  RK    +S  E + +   + KK      +  
Sbjct: 810 ----HVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSESDDDDSHSKKKRQRSESHSA 869

Query: 939 ADGSDTLESKENRRLGKERSKKQRKRRY-SDEEYSDEDEAGHDRSKKSQSHKDRKKSRRH 998
           ++ S + ES+ + +  K+  KK +KRR+ SD   SD +     + K   S KDR + R  
Sbjct: 870 SERSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDTEREKDKKEKDRDSEKDRSRQR-- 929

[Close]
BLAST of CmaCh04G004350 vs. ExPASy Swiss-Prot
Match: O75400 (Pre-mRNA-processing factor 40 homolog A OS=Homo sapiens OX=9606 GN=PRPF40A PE=1 SV=2)

HSP 1 Score: 255.4 bits (651), Expect = 2.7e-66
Identity = 273/878 (31.09%), Postives = 435/878 (49.54%), Query Frame = 0 

Query: 159 PTIHPPPHSQAPIVSSGAQLGSSVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEW 218
           P +  PP  Q P + S    G  +S   +++A  QP     + ++ +V    +  A S W
Sbjct: 90  PPMGGPPMGQMPGMMSSVMPGMMMS--HMSQASMQPALPPGV-NSMDVAAGTASGAKSMW 149

Query: 219 REHTSADGRRYYYNKKTKISSWEKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKE 278
            EH S DGR YYYN +TK S+WEKP +L TP E+  +   WKE+ S  G+ YYYN  TKE
Sbjct: 150 TEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKPYYYNSQTKE 209

Query: 279 SKWVIPEEL-----------------KLARERAEKASTLGTEKEPVPLELPSVSSLEAPS 338
           S+W  P+EL                 K       KA     ++E        V + E P 
Sbjct: 210 SRWAKPKELEDLEGYQNTIVAGSLITKSNLHAMIKAEESSKQEECTTTSTAPVPTTEIP- 269

Query: 339 TTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVETNGVQSPVNIIPSSCAISEND 398
           TT  TM+ A+  A+  ++ AA         + A+ S+  +N V   V ++P     S   
Sbjct: 270 TTMSTMAAAEAAAAVVAAAAAAAAAAAAANANASTSA--SNTVSGTVPVVPEPEVTSIVA 329

Query: 399 SAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEETKKDISEEKVEFT----MEER 458
           +        T+        +S          VS+   EET K   E   +FT     EE 
Sbjct: 330 TVVDNENTVTISTEEQAQLTSTPAIQDQSVEVSSNTGEETSK--QETVADFTPKKEEEES 389

Query: 459 AIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIINDKRYGALKTLGERKHAF 518
              + T  +  K+EAK AFK LL+   V S+ +W++AM++IIND RY AL  L E+K AF
Sbjct: 390 QPAKKTYTWNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAF 449

Query: 519 NEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWSKAESIFENDERFLAIER 578
           N +  Q +K+E EE R K K+A+E F++ LE   ++TS+ R+ KAE +F   E + AI  
Sbjct: 450 NAYKVQTEKEEKEEARSKYKEAKESFQRFLENHEKMTSTTRYKKAEQMFGEMEVWNAIS- 509

Query: 579 DRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDFIKASSQWRKVQDRLV-- 638
           +RDR ++++  L  L  KE+ +A++ R RN    +  L++   +  S+ W + Q  L+  
Sbjct: 510 ERDRLEIYEDVLFFLSKKEKEQAKQLRKRNWEALKNILDNMANVTYSTTWSEAQQYLMDN 569

Query: 639 ----VDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERKNRDEFRKMMEE 698
                DE    ++K D L  F+E++R LEKEEEE+++      R+ +RKNR+ F+  ++E
Sbjct: 570 PTFAEDEELQNMDKEDALICFEEHIRALEKEEEEEKQKSLLRERRRQRKNRESFQIFLDE 629

Query: 699 HIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEIQKQYRDDKTRI 758
               G L     W +    +     +  +     GST  +LF+   ++++ +Y D+K  I
Sbjct: 630 LHEHGQLHSMSSWMELYPTISSDIRFTNMLGQ-PGSTALDLFKFYVEDLKARYHDEKKII 689

Query: 759 KDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA----REKEEKE 818
           KD LK +  V+ ++ T +DF A IS    +  +   N+KL F+ LLE+A    RE+E++E
Sbjct: 690 KDILKDKGFVVEVNTTFEDFVAIISSTKRSTTLDAGNIKLAFNSLLEKAEAREREREKEE 749

Query: 819 AKKRKRLGDDFFSLL-CSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIFEEYIAQ 878
           A+K KR    F S+L  +   I + + WED +  F     +  I  ES  K IF++++  
Sbjct: 750 ARKMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEPAFEDITLESERKRIFKDFM-- 809

Query: 879 LKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVDNEN--- 938
              H  E++ +    K +K   K ++  RK    +S  + + + + +SKK    +E+   
Sbjct: 810 ---HVLEHECQHHHSKNKKHSKKSKKHHRKRSRSRSGSDSD-DDDSHSKKKRQRSESRSA 869

Query: 939 ADGSDTLESKENRRLGKERSKKQRKRRY-SDEEYSDEDEAGHDRSKKSQSHKDRKKSRRH 998
           ++ S + ES+ + +  K+  KK +KRR+ SD   SD +     + K  +S KDR + R  
Sbjct: 870 SEHSSSAESERSYKKSKKHKKKSKKRRHKSDSPESDAEREKDKKEKDRESEKDRTRQR-- 929

[Close]
BLAST of CmaCh04G004350 vs. ExPASy Swiss-Prot
Match: Q6NWY9 (Pre-mRNA-processing factor 40 homolog B OS=Homo sapiens OX=9606 GN=PRPF40B PE=1 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 1.2e-48
Identity = 248/902 (27.49%), Postives = 401/902 (44.46%), Query Frame = 0 

Query: 100 LPPQTIPLPIAQPNRNFTPELQQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTP 159
           +PP  IP P         P + Q  P   P   G+  P              PP      
Sbjct: 7   MPPPGIPPPFPPMG---LPPMSQRPPAIPPMPPGILPP------------MLPPMG---- 66

Query: 160 TIHPPPHSQAPIVSSGAQLGSSVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWR 219
              PPP +Q P +      G  +   P+  A      T+S A A       +G   + W 
Sbjct: 67  --APPPLTQIPGMVPPMMPGMLMPAVPVTAATAPGADTASSAVAG------TGPPRALWS 126

Query: 220 EHTSADGRRYYYNKKTKISSWEKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKES 279
           EH + DGR YYYN   K S WEKP  L +  E   +   WKE+ S  G+ YYYN  +KES
Sbjct: 127 EHVAPDGRIYYYNADDKQSVWEKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKES 186

Query: 280 KWVIPEELKLARERAEKASTLGTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSS 339
           +W  P++L    E   K    G +++    +LP     + P                   
Sbjct: 187 RWTRPKDLD-DLEVLVKQEAAGKQQQ----QLPQTLQPQPPQP----------------- 246

Query: 340 VAAIDLQNDKDTSPAAVSSVETNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLN 399
                 Q D    P   + V T G+  P                 G+ +   +E    L 
Sbjct: 247 ------QPDPPPVPPGPTPVPT-GLLEP--------------EPGGSEDCDVLEATQPLE 306

Query: 400 QSSAQDTDSLIDGVSAQDLEETKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKAL 459
           Q   Q    L +G S+    + +++  E K E        ++   ++ N+++AK AFK L
Sbjct: 307 QGFLQ---QLEEGPSSSGQHQPQQEEEESKPE-------PERSGLSWSNREKAKQAFKEL 366

Query: 460 LESANVGSDWTWDRAMRIIINDKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKA 519
           L    V S+ +W++AM++++ D RY AL  L E+K AFN +  QR+K+E EE R++ K+A
Sbjct: 367 LRDKAVPSNASWEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEA 426

Query: 520 REEFRKMLEESTEVTSSMRWSKAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAK 579
           ++  +  LE+   +TS+ R+ +AE  F   E + A+  +RDR++++D  L  L  KE+ +
Sbjct: 427 KQTLQHFLEQHERMTSTTRYRRAEQTFGELEVW-AVVPERDRKEVYDDVLFFLAKKEKEQ 486

Query: 580 AQEERSRNILEYRTFLESCDFIKASSQWRKVQDRLV------VDERCARLEKIDRLEIFQ 639
           A++ R RNI   ++ L+    +   + W + Q  L+       D +   ++K D L  F+
Sbjct: 487 AKQLRRRNIQALKSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFE 546

Query: 640 EYLRDLEKEEEEQRKIQKEELRKAERKNRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKE 699
           E++R LE+EEEE+R+  +   R+ +RKNR+ F+  ++E    G L     W +    V  
Sbjct: 547 EHIRALEREEEEERERARLRERRQQRKNREAFQTFLDELHETGQLHSMSTWMELYPAV-S 606

Query: 700 LPAYLAVAANTSGSTPKNLFEDVADEIQKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKA 759
                A      GSTP +LF+   +E++ ++ D+K  IKD LK R   + ++   +DF  
Sbjct: 607 TDVRFANMLGQPGSTPLDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVNTAFEDFAH 666

Query: 760 AISKDISNPPISDSNLKLIFDELLERA----REKEEKEAKKRKRLGDDFFSLL-CSFKEI 819
            IS D     +   N+KL F+ LLE+A    RE+E++EA++ +R    F S+L  +   +
Sbjct: 667 VISFDKRAAALDAGNIKLTFNSLLEKAEAREREREKEEARRMRRREAAFRSMLRQAVPAL 726

Query: 820 SVYSNWEDSKLLFEGSQEYSSIEDESFCKEIFEEYIAQLKEHAKENDTKRKEEKARKEKD 879
            + + WE+ +  F     +  I  ES    +F E++  L    ++ + +    K RK   
Sbjct: 727 ELGTAWEEVRERFVCDSAFEQITLESERIRLFREFLQVL----EQTECQHLHTKGRKHGR 786

Query: 880 KEERDRRKEKHRKSEREKEREK---------------------EENSKKDGVDNENA--- 939
           K ++   K  H  S  E E E+                     E +S  D V++  A   
Sbjct: 787 KGKKHHHKRSHSPSGSESEEEELPPPSLRPPKRRRRNPSESGSEPSSSLDSVESGGAALG 822

Query: 940 ----DGSDTLESKENRRLGKERSKKQRKRRYS----DEEYSDEDEAGHDRSKKSQSH-KD 958
                 S  L +    R  K+  KK +KRR+     + E   E++AG +  +K Q   KD
Sbjct: 847 GRGSPSSHLLGADHGLRKAKKPKKKTKKRRHKSNSPESETDPEEKAGKESDEKEQEQDKD 822

[Close]
BLAST of CmaCh04G004350 vs. ExPASy TrEMBL
Match: A0A6J1IK68 (pre-mRNA-processing protein 40A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477836 PE=4 SV=1)

HSP 1 Score: 1873.6 bits (4852), Expect = 0.0e+00
Identity = 1006/1006 (100.00%), Postives = 1006/1006 (100.00%), Query Frame = 0 

Query: 1    MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG 60
            MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG
Sbjct: 1    MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG 60

Query: 61   QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL 120
            QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL
Sbjct: 61   QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL 120

Query: 121  QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGAQLGS 180
            QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGAQLGS
Sbjct: 121  QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGAQLGS 180

Query: 181  SVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW 240
            SVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW
Sbjct: 181  SVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW 240

Query: 241  EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL 300
            EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL
Sbjct: 241  EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL 300

Query: 301  GTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVE 360
            GTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVE
Sbjct: 301  GTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVE 360

Query: 361  TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE 420
            TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE
Sbjct: 361  TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE 420

Query: 421  TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN 480
            TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN
Sbjct: 421  TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN 480

Query: 481  DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS 540
            DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS
Sbjct: 481  DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS 540

Query: 541  KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF 600
            KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF
Sbjct: 541  KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF 600

Query: 601  IKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK 660
            IKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK
Sbjct: 601  IKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK 660

Query: 661  NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI 720
            NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI
Sbjct: 661  NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI 720

Query: 721  QKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA 780
            QKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA
Sbjct: 721  QKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA 780

Query: 781  REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIF 840
            REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIF
Sbjct: 781  REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIF 840

Query: 841  EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD 900
            EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD
Sbjct: 841  EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD 900

Query: 901  NENADGSDTLESKENRRLGKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR 960
            NENADGSDTLESKENRRLGKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR
Sbjct: 901  NENADGSDTLESKENRRLGKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR 960

Query: 961  RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR 1007
            RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR
Sbjct: 961  RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR 1006

[Close]
BLAST of CmaCh04G004350 vs. ExPASy TrEMBL
Match: A0A6J1IK89 (pre-mRNA-processing protein 40A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477836 PE=4 SV=1)

HSP 1 Score: 1867.4 bits (4836), Expect = 0.0e+00
Identity = 1005/1006 (99.90%), Postives = 1005/1006 (99.90%), Query Frame = 0 

Query: 1    MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG 60
            MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTN QFRPAVPAPHSQQFVPLPSSHFQPLG
Sbjct: 1    MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTN-QFRPAVPAPHSQQFVPLPSSHFQPLG 60

Query: 61   QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL 120
            QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL
Sbjct: 61   QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL 120

Query: 121  QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGAQLGS 180
            QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGAQLGS
Sbjct: 121  QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGAQLGS 180

Query: 181  SVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW 240
            SVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW
Sbjct: 181  SVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW 240

Query: 241  EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL 300
            EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL
Sbjct: 241  EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL 300

Query: 301  GTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVE 360
            GTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVE
Sbjct: 301  GTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVE 360

Query: 361  TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE 420
            TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE
Sbjct: 361  TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE 420

Query: 421  TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN 480
            TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN
Sbjct: 421  TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN 480

Query: 481  DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS 540
            DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS
Sbjct: 481  DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS 540

Query: 541  KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF 600
            KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF
Sbjct: 541  KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF 600

Query: 601  IKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK 660
            IKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK
Sbjct: 601  IKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK 660

Query: 661  NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI 720
            NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI
Sbjct: 661  NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI 720

Query: 721  QKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA 780
            QKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA
Sbjct: 721  QKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA 780

Query: 781  REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIF 840
            REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIF
Sbjct: 781  REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIF 840

Query: 841  EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD 900
            EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD
Sbjct: 841  EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD 900

Query: 901  NENADGSDTLESKENRRLGKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR 960
            NENADGSDTLESKENRRLGKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR
Sbjct: 901  NENADGSDTLESKENRRLGKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR 960

Query: 961  RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR 1007
            RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR
Sbjct: 961  RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR 1005

[Close]
BLAST of CmaCh04G004350 vs. ExPASy TrEMBL
Match: A0A6J1FVB1 (pre-mRNA-processing protein 40A-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447182 PE=4 SV=1)

HSP 1 Score: 1840.5 bits (4766), Expect = 0.0e+00
Identity = 987/1006 (98.11%), Postives = 992/1006 (98.61%), Query Frame = 0 

Query: 1    MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG 60
            MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG
Sbjct: 1    MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG 60

Query: 61   QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL 120
            QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL
Sbjct: 61   QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL 120

Query: 121  QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGAQLGS 180
            QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSG QLGS
Sbjct: 121  QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGGQLGS 180

Query: 181  SVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW 240
            SVSVTPLN AREQ YATSS+ASA NVQTMPSGAASSEWREHTSADGRRYYYNK TKISSW
Sbjct: 181  SVSVTPLNHAREQTYATSSVASAVNVQTMPSGAASSEWREHTSADGRRYYYNKNTKISSW 240

Query: 241  EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL 300
            EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL
Sbjct: 241  EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL 300

Query: 301  GTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVE 360
            GTEKEPVPLELPSVSSLE PSTTADT STAKGLASSTSSVAA+DLQNDKD SPAAVSSVE
Sbjct: 301  GTEKEPVPLELPSVSSLETPSTTADTTSTAKGLASSTSSVAAVDLQNDKDASPAAVSSVE 360

Query: 361  TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE 420
            TNGVQSPVNIIPSSCAISEND+AAG VEDT VEPRNDLNQSSAQDTDSLIDGVSAQDLEE
Sbjct: 361  TNGVQSPVNIIPSSCAISENDNAAGVVEDTIVEPRNDLNQSSAQDTDSLIDGVSAQDLEE 420

Query: 421  TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN 480
            TKKD SEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN
Sbjct: 421  TKKDTSEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN 480

Query: 481  DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS 540
            DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS
Sbjct: 481  DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS 540

Query: 541  KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF 600
            KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF
Sbjct: 541  KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF 600

Query: 601  IKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK 660
            IKASSQWRKVQDRLVVDERC+RLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK
Sbjct: 601  IKASSQWRKVQDRLVVDERCSRLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK 660

Query: 661  NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI 720
            NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI
Sbjct: 661  NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI 720

Query: 721  QKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA 780
            QKQYRDDKTRIKDALKLRKI MSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA
Sbjct: 721  QKQYRDDKTRIKDALKLRKIAMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA 780

Query: 781  REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIF 840
            REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSK LFEGSQEYSSIEDESFCKEIF
Sbjct: 781  REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKPLFEGSQEYSSIEDESFCKEIF 840

Query: 841  EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD 900
            EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD
Sbjct: 841  EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD 900

Query: 901  NENADGSDTLESKENRRLGKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR 960
            NENADGSDTLESKENRRL KERSKKQRKRRYSD+EYSDEDEAGHDRSKKSQSHKDRKKSR
Sbjct: 901  NENADGSDTLESKENRRLEKERSKKQRKRRYSDDEYSDEDEAGHDRSKKSQSHKDRKKSR 960

Query: 961  RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR 1007
            RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR
Sbjct: 961  RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR 1006

[Close]
BLAST of CmaCh04G004350 vs. ExPASy TrEMBL
Match: A0A6J1FNZ1 (pre-mRNA-processing protein 40A-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447182 PE=4 SV=1)

HSP 1 Score: 1834.3 bits (4750), Expect = 0.0e+00
Identity = 986/1006 (98.01%), Postives = 991/1006 (98.51%), Query Frame = 0 

Query: 1    MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG 60
            MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTN QFRPAVPAPHSQQFVPLPSSHFQPLG
Sbjct: 1    MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTN-QFRPAVPAPHSQQFVPLPSSHFQPLG 60

Query: 61   QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL 120
            QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL
Sbjct: 61   QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL 120

Query: 121  QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGAQLGS 180
            QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSG QLGS
Sbjct: 121  QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGGQLGS 180

Query: 181  SVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW 240
            SVSVTPLN AREQ YATSS+ASA NVQTMPSGAASSEWREHTSADGRRYYYNK TKISSW
Sbjct: 181  SVSVTPLNHAREQTYATSSVASAVNVQTMPSGAASSEWREHTSADGRRYYYNKNTKISSW 240

Query: 241  EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL 300
            EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL
Sbjct: 241  EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL 300

Query: 301  GTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVE 360
            GTEKEPVPLELPSVSSLE PSTTADT STAKGLASSTSSVAA+DLQNDKD SPAAVSSVE
Sbjct: 301  GTEKEPVPLELPSVSSLETPSTTADTTSTAKGLASSTSSVAAVDLQNDKDASPAAVSSVE 360

Query: 361  TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE 420
            TNGVQSPVNIIPSSCAISEND+AAG VEDT VEPRNDLNQSSAQDTDSLIDGVSAQDLEE
Sbjct: 361  TNGVQSPVNIIPSSCAISENDNAAGVVEDTIVEPRNDLNQSSAQDTDSLIDGVSAQDLEE 420

Query: 421  TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN 480
            TKKD SEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN
Sbjct: 421  TKKDTSEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN 480

Query: 481  DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS 540
            DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS
Sbjct: 481  DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS 540

Query: 541  KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF 600
            KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF
Sbjct: 541  KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF 600

Query: 601  IKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK 660
            IKASSQWRKVQDRLVVDERC+RLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK
Sbjct: 601  IKASSQWRKVQDRLVVDERCSRLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK 660

Query: 661  NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI 720
            NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI
Sbjct: 661  NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI 720

Query: 721  QKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA 780
            QKQYRDDKTRIKDALKLRKI MSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA
Sbjct: 721  QKQYRDDKTRIKDALKLRKIAMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA 780

Query: 781  REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIF 840
            REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSK LFEGSQEYSSIEDESFCKEIF
Sbjct: 781  REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKPLFEGSQEYSSIEDESFCKEIF 840

Query: 841  EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD 900
            EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD
Sbjct: 841  EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD 900

Query: 901  NENADGSDTLESKENRRLGKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR 960
            NENADGSDTLESKENRRL KERSKKQRKRRYSD+EYSDEDEAGHDRSKKSQSHKDRKKSR
Sbjct: 901  NENADGSDTLESKENRRLEKERSKKQRKRRYSDDEYSDEDEAGHDRSKKSQSHKDRKKSR 960

Query: 961  RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR 1007
            RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR
Sbjct: 961  RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR 1005

[Close]
BLAST of CmaCh04G004350 vs. ExPASy TrEMBL
Match: A0A0A0KSY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000610 PE=4 SV=1)

HSP 1 Score: 1635.2 bits (4233), Expect = 0.0e+00
Identity = 881/1009 (87.31%), Postives = 934/1009 (92.57%), Query Frame = 0 

Query: 1    MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG 60
            MANNPQYSGLQPLRPPVVGPMDQ R+FVP MT  QFRPAVP PHSQQFVPLPS HFQPLG
Sbjct: 1    MANNPQYSGLQPLRPPVVGPMDQGRSFVPPMT-AQFRPAVPGPHSQQFVPLPSPHFQPLG 60

Query: 61   QGVPMMNVGM-PPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPE 120
            QGVP+MN GM PPPP  QQ QFSQPVAHLP RPCEPVHG+LPPQTIPLP+AQ NR +TPE
Sbjct: 61   QGVPLMNAGMPPPPPQPQQSQFSQPVAHLPLRPCEPVHGTLPPQTIPLPVAQQNRQYTPE 120

Query: 121  LQQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGAQLG 180
            LQQAQPLTQPAAIG+PGPGGSGTSLSA Y+YGPPQNYNT  + P P S AP+VSSG QLG
Sbjct: 121  LQQAQPLTQPAAIGMPGPGGSGTSLSASYSYGPPQNYNTTIVQPVPQSHAPVVSSGGQLG 180

Query: 181  SSVSVTPLNRAREQPYATSSIASAANVQTMPSG-AASSEWREHTSADGRRYYYNKKTKIS 240
            S VSVTPLN +REQPYATSS+ SAANV  MPS  AASSEWREHTS DGRRYYYNKKTKIS
Sbjct: 181  SLVSVTPLNHSREQPYATSSVTSAANVLLMPSATAASSEWREHTSPDGRRYYYNKKTKIS 240

Query: 241  SWEKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKAS 300
            SWEKPFELMT +ERADASTNWKEFTSPEGRKYYYNK+TKESKW+IPEELKLARER EK+S
Sbjct: 241  SWEKPFELMTAIERADASTNWKEFTSPEGRKYYYNKMTKESKWIIPEELKLARERVEKSS 300

Query: 301  TLGTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSS 360
            TLGTEKEPVPLELPSVS+LEAPSTTADT +TAK LAS+  SVAA DLQ DKD SP AVSS
Sbjct: 301  TLGTEKEPVPLELPSVSTLEAPSTTADTQTTAKELASNALSVAAADLQTDKDASPGAVSS 360

Query: 361  VETN-GVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQD 420
            VETN GVQSPVNI+PSSCAISEND +AG VE TTVEPRNDLNQSSAQDT++L DGVSAQ+
Sbjct: 361  VETNGGVQSPVNIVPSSCAISENDDSAGVVEVTTVEPRNDLNQSSAQDTENLTDGVSAQE 420

Query: 421  LEETKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRI 480
            LEETKKD S+EKVEFT+EERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRI
Sbjct: 421  LEETKKDTSDEKVEFTLEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRI 480

Query: 481  IINDKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSM 540
            IINDKRYGALKTLGERK AFNEFLGQRKKQEVEERR KQKKAREEFRKMLEESTE+TSSM
Sbjct: 481  IINDKRYGALKTLGERKQAFNEFLGQRKKQEVEERRTKQKKAREEFRKMLEESTELTSSM 540

Query: 541  RWSKAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLES 600
            RW KAESIFENDERF A+ERDRDRRDLF+ +LEELKNKERAKAQEERSRNILEYR FLES
Sbjct: 541  RWGKAESIFENDERFQAVERDRDRRDLFESFLEELKNKERAKAQEERSRNILEYRKFLES 600

Query: 601  CDFIKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKA 660
            CDFIKASSQWRKVQDRL VDERC+RLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKA
Sbjct: 601  CDFIKASSQWRKVQDRLEVDERCSRLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKA 660

Query: 661  ERKNRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVA 720
            ERKNRDEFRKMMEEHIAAG+LTPKIHWRDYCMKVKELPAYLAVAANTSGSTPK+LFEDVA
Sbjct: 661  ERKNRDEFRKMMEEHIAAGLLTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKDLFEDVA 720

Query: 721  DEIQKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELL 780
            +E+QKQYRDDKTRIKDA+KLRK+ +SLSWTLDDFKAAISKDI NPP+ D+NLKL+FDELL
Sbjct: 721  EELQKQYRDDKTRIKDAVKLRKVAISLSWTLDDFKAAISKDIGNPPVPDTNLKLVFDELL 780

Query: 781  ERAREKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCK 840
            ERAREKEE+EAKKRKRLGDDFF+LLCSFKEISVYSNWEDSK  FEGSQEYS+IEDE  CK
Sbjct: 781  ERAREKEEREAKKRKRLGDDFFNLLCSFKEISVYSNWEDSKSSFEGSQEYSAIEDEKLCK 840

Query: 841  EIFEEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKD 900
            EIFEEYIAQLKEH KEN+ KRKEEKARKE+++EER+RRKEKH+K     EREKE++ KKD
Sbjct: 841  EIFEEYIAQLKEHTKENENKRKEEKARKEREREERERRKEKHKKG----EREKEDHFKKD 900

Query: 901  GVDNENADGSDTLESKENRRLGKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRK 960
            GVDNEN D SDTLE KENRRL KERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRK
Sbjct: 901  GVDNENVDVSDTLELKENRRLDKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRK 960

Query: 961  KSRRHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR 1007
            KSRRH SAH+SDGESRHRRHKR+HRNGS KN DHEELEDGECGDDGASR
Sbjct: 961  KSRRHGSAHESDGESRHRRHKRDHRNGSYKNLDHEELEDGECGDDGASR 1004

[Close]
BLAST of CmaCh04G004350 vs. NCBI nr
Match: XP_022977536.1 (pre-mRNA-processing protein 40A-like isoform X1 [Cucurbita maxima] >XP_022977544.1 pre-mRNA-processing protein 40A-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1873.6 bits (4852), Expect = 0.0e+00
Identity = 1006/1006 (100.00%), Postives = 1006/1006 (100.00%), Query Frame = 0 

Query: 1    MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG 60
            MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG
Sbjct: 1    MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG 60

Query: 61   QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL 120
            QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL
Sbjct: 61   QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL 120

Query: 121  QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGAQLGS 180
            QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGAQLGS
Sbjct: 121  QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGAQLGS 180

Query: 181  SVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW 240
            SVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW
Sbjct: 181  SVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW 240

Query: 241  EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL 300
            EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL
Sbjct: 241  EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL 300

Query: 301  GTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVE 360
            GTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVE
Sbjct: 301  GTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVE 360

Query: 361  TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE 420
            TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE
Sbjct: 361  TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE 420

Query: 421  TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN 480
            TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN
Sbjct: 421  TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN 480

Query: 481  DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS 540
            DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS
Sbjct: 481  DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS 540

Query: 541  KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF 600
            KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF
Sbjct: 541  KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF 600

Query: 601  IKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK 660
            IKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK
Sbjct: 601  IKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK 660

Query: 661  NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI 720
            NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI
Sbjct: 661  NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI 720

Query: 721  QKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA 780
            QKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA
Sbjct: 721  QKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA 780

Query: 781  REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIF 840
            REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIF
Sbjct: 781  REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIF 840

Query: 841  EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD 900
            EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD
Sbjct: 841  EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD 900

Query: 901  NENADGSDTLESKENRRLGKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR 960
            NENADGSDTLESKENRRLGKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR
Sbjct: 901  NENADGSDTLESKENRRLGKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR 960

Query: 961  RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR 1007
            RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR
Sbjct: 961  RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR 1006

[Close]
BLAST of CmaCh04G004350 vs. NCBI nr
Match: XP_022977551.1 (pre-mRNA-processing protein 40A-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 1867.4 bits (4836), Expect = 0.0e+00
Identity = 1005/1006 (99.90%), Postives = 1005/1006 (99.90%), Query Frame = 0 

Query: 1    MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG 60
            MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTN QFRPAVPAPHSQQFVPLPSSHFQPLG
Sbjct: 1    MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTN-QFRPAVPAPHSQQFVPLPSSHFQPLG 60

Query: 61   QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL 120
            QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL
Sbjct: 61   QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL 120

Query: 121  QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGAQLGS 180
            QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGAQLGS
Sbjct: 121  QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGAQLGS 180

Query: 181  SVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW 240
            SVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW
Sbjct: 181  SVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW 240

Query: 241  EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL 300
            EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL
Sbjct: 241  EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL 300

Query: 301  GTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVE 360
            GTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVE
Sbjct: 301  GTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVE 360

Query: 361  TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE 420
            TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE
Sbjct: 361  TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE 420

Query: 421  TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN 480
            TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN
Sbjct: 421  TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN 480

Query: 481  DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS 540
            DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS
Sbjct: 481  DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS 540

Query: 541  KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF 600
            KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF
Sbjct: 541  KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF 600

Query: 601  IKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK 660
            IKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK
Sbjct: 601  IKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK 660

Query: 661  NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI 720
            NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI
Sbjct: 661  NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI 720

Query: 721  QKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA 780
            QKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA
Sbjct: 721  QKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA 780

Query: 781  REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIF 840
            REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIF
Sbjct: 781  REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIF 840

Query: 841  EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD 900
            EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD
Sbjct: 841  EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD 900

Query: 901  NENADGSDTLESKENRRLGKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR 960
            NENADGSDTLESKENRRLGKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR
Sbjct: 901  NENADGSDTLESKENRRLGKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR 960

Query: 961  RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR 1007
            RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR
Sbjct: 961  RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR 1005

[Close]
BLAST of CmaCh04G004350 vs. NCBI nr
Match: KAG7030933.1 (Pre-mRNA-processing protein 40A, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1851.6 bits (4795), Expect = 0.0e+00
Identity = 993/1006 (98.71%), Postives = 998/1006 (99.20%), Query Frame = 0 

Query: 1    MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG 60
            MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG
Sbjct: 83   MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG 142

Query: 61   QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL 120
            QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLP+AQPNRNFTPEL
Sbjct: 143  QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPMAQPNRNFTPEL 202

Query: 121  QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGAQLGS 180
            QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQA IVSSG QLGS
Sbjct: 203  QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQASIVSSGGQLGS 262

Query: 181  SVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW 240
            SVSVTPLN  REQPYATSS+ASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW
Sbjct: 263  SVSVTPLNHTREQPYATSSVASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW 322

Query: 241  EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL 300
            EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL
Sbjct: 323  EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL 382

Query: 301  GTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVE 360
            GTEKEPVPLELPSVSSLEAPSTTADT STAKGLASSTSSVAA+DLQNDKDTSPAAVSSVE
Sbjct: 383  GTEKEPVPLELPSVSSLEAPSTTADTTSTAKGLASSTSSVAAVDLQNDKDTSPAAVSSVE 442

Query: 361  TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE 420
            TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE
Sbjct: 443  TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE 502

Query: 421  TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN 480
            TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN
Sbjct: 503  TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN 562

Query: 481  DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS 540
            DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS
Sbjct: 563  DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS 622

Query: 541  KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF 600
            KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF
Sbjct: 623  KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF 682

Query: 601  IKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK 660
            IKASSQWRKVQDRLVVDERC+RLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK
Sbjct: 683  IKASSQWRKVQDRLVVDERCSRLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK 742

Query: 661  NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI 720
            NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI
Sbjct: 743  NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI 802

Query: 721  QKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA 780
            QKQYRDDKTRIKDALKLRKI MSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA
Sbjct: 803  QKQYRDDKTRIKDALKLRKIAMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA 862

Query: 781  REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIF 840
            REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSK LFEGSQEYSSIEDESFCKEIF
Sbjct: 863  REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKPLFEGSQEYSSIEDESFCKEIF 922

Query: 841  EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD 900
            EEYIAQLKEHAKENDTKRKEEKARKEKDKEERD+RKEKHRKSEREKEREKEENSKKDGVD
Sbjct: 923  EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDKRKEKHRKSEREKEREKEENSKKDGVD 982

Query: 901  NENADGSDTLESKENRRLGKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR 960
            NENADGSDTLESKENRRL KERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR
Sbjct: 983  NENADGSDTLESKENRRLEKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR 1042

Query: 961  RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR 1007
            RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR
Sbjct: 1043 RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR 1088

[Close]
BLAST of CmaCh04G004350 vs. NCBI nr
Match: KAG6600273.1 (Pre-mRNA-processing protein 40A, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1848.2 bits (4786), Expect = 0.0e+00
Identity = 992/1006 (98.61%), Postives = 998/1006 (99.20%), Query Frame = 0 

Query: 1    MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG 60
            MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTN QFRPAVPAPHSQQFVPLPSSHFQPLG
Sbjct: 1    MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTN-QFRPAVPAPHSQQFVPLPSSHFQPLG 60

Query: 61   QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL 120
            QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL
Sbjct: 61   QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL 120

Query: 121  QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGAQLGS 180
            QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSG QLGS
Sbjct: 121  QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGGQLGS 180

Query: 181  SVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW 240
            SVSVTPLN AREQPYATSS+ASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW
Sbjct: 181  SVSVTPLNHAREQPYATSSVASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW 240

Query: 241  EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL 300
            EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL
Sbjct: 241  EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL 300

Query: 301  GTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVE 360
            GTEKEPVPLELPSVSSLEAPSTTADT STAKGLASSTSSVAA+DLQNDKDTSPAAVSSVE
Sbjct: 301  GTEKEPVPLELPSVSSLEAPSTTADTTSTAKGLASSTSSVAAVDLQNDKDTSPAAVSSVE 360

Query: 361  TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE 420
            TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDG+SAQDLEE
Sbjct: 361  TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGISAQDLEE 420

Query: 421  TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN 480
            TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN
Sbjct: 421  TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN 480

Query: 481  DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS 540
            DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS
Sbjct: 481  DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS 540

Query: 541  KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF 600
            KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF
Sbjct: 541  KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF 600

Query: 601  IKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK 660
            IKASSQWRKVQDRLVVDERC+RLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK
Sbjct: 601  IKASSQWRKVQDRLVVDERCSRLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK 660

Query: 661  NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI 720
            NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI
Sbjct: 661  NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI 720

Query: 721  QKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA 780
            QKQYRDDKTRIKDALKLRKI MSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA
Sbjct: 721  QKQYRDDKTRIKDALKLRKIAMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA 780

Query: 781  REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIF 840
            REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSK LFEGSQEYSSIEDESFCKEIF
Sbjct: 781  REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKPLFEGSQEYSSIEDESFCKEIF 840

Query: 841  EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD 900
            EEYIAQLKEHAKENDTKRKEEKARKEKDKEERD+RKEKHRKSEREKEREKEENSKKDGVD
Sbjct: 841  EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDKRKEKHRKSEREKEREKEENSKKDGVD 900

Query: 901  NENADGSDTLESKENRRLGKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR 960
            NENADGSDTLESKENRRL KERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR
Sbjct: 901  NENADGSDTLESKENRRLEKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR 960

Query: 961  RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR 1007
            RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGA +
Sbjct: 961  RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGAKK 1005

[Close]
BLAST of CmaCh04G004350 vs. NCBI nr
Match: XP_023536653.1 (pre-mRNA-processing protein 40A-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023536655.1 pre-mRNA-processing protein 40A-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1847.8 bits (4785), Expect = 0.0e+00
Identity = 993/1006 (98.71%), Postives = 997/1006 (99.11%), Query Frame = 0 

Query: 1    MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG 60
            MANNPQYSGLQP+RPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG
Sbjct: 1    MANNPQYSGLQPIRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG 60

Query: 61   QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL 120
            QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL
Sbjct: 61   QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL 120

Query: 121  QQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQNYNTPTIHPPPHSQAPIVSSGAQLGS 180
            QQAQPLTQPAAIGVPGPGGSGT LSAPYNYGPPQNYNT TIHPPPHSQAPIVSSG QLGS
Sbjct: 121  QQAQPLTQPAAIGVPGPGGSGTPLSAPYNYGPPQNYNTSTIHPPPHSQAPIVSSGGQLGS 180

Query: 181  SVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKKTKISSW 240
            SVSVTPLN AREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNK+TKISSW
Sbjct: 181  SVSVTPLNHAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKRTKISSW 240

Query: 241  EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL 300
            EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL
Sbjct: 241  EKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKASTL 300

Query: 301  GTEKEPVPLELPSVSSLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVE 360
            GTEKEPV LELPSVSSLEAPSTTADT STAKGLASSTSSVAA+DLQNDKDTSPAAVSSVE
Sbjct: 301  GTEKEPVHLELPSVSSLEAPSTTADTTSTAKGLASSTSSVAAVDLQNDKDTSPAAVSSVE 360

Query: 361  TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE 420
            TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE
Sbjct: 361  TNGVQSPVNIIPSSCAISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEE 420

Query: 421  TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN 480
            TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN
Sbjct: 421  TKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIIN 480

Query: 481  DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS 540
            DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS
Sbjct: 481  DKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWS 540

Query: 541  KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDF 600
            KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSR+ILEYRTFLESCDF
Sbjct: 541  KAESIFENDERFLAIERDRDRRDLFDGYLEELKNKERAKAQEERSRHILEYRTFLESCDF 600

Query: 601  IKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK 660
            IKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK
Sbjct: 601  IKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERK 660

Query: 661  NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI 720
            NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI
Sbjct: 661  NRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEI 720

Query: 721  QKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA 780
            QKQYRDDKTRIKDALKLRKI MSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA
Sbjct: 721  QKQYRDDKTRIKDALKLRKIAMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERA 780

Query: 781  REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIF 840
            REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSK LFEGSQEYSSIEDESFCKEIF
Sbjct: 781  REKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDSKPLFEGSQEYSSIEDESFCKEIF 840

Query: 841  EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD 900
            EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD
Sbjct: 841  EEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVD 900

Query: 901  NENADGSDTLESKENRRLGKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR 960
            NENADGSDTLESKENRRL KERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR
Sbjct: 901  NENADGSDTLESKENRRLEKERSKKQRKRRYSDEEYSDEDEAGHDRSKKSQSHKDRKKSR 960

Query: 961  RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR 1007
            RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR
Sbjct: 961  RHASAHDSDGESRHRRHKREHRNGSSKNFDHEELEDGECGDDGASR 1006

[Close]
BLAST of CmaCh04G004350 vs. TAIR 10
Match: AT1G44910.1 (pre-mRNA-processing protein 40A )

HSP 1 Score: 746.9 bits (1927), Expect = 2.1e-215
Identity = 489/995 (49.15%), Postives = 657/995 (66.03%), Query Frame = 0 

Query: 29   PQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLGQGVPMMNVGMPPPPLAQQPQFSQPVAH- 88
            PQ +  QFRP VP    Q FVP  S  F P G         +PP   +Q PQ+SQP+   
Sbjct: 6    PQSSGTQFRPMVPGQQGQHFVPAASQPFHPYGH--------VPPNVQSQPPQYSQPIQQQ 65

Query: 89   --LPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPELQQAQPLTQPAAIGVPGPGGSGTSLS 148
               P RP +PVH +   Q + +P  Q N+  T    Q QP   P    + G   SG   S
Sbjct: 66   QLFPVRPGQPVHITSSSQAVSVPYIQTNKILTSGSTQPQPNAPP----MTGFATSGPPFS 125

Query: 149  APYNYGP---PQNYNTPTIHPPPHSQAPIVSSGAQLGSSVSVTPLNRARE--QPYATSSI 208
            +PY + P   PQ    PT    P+SQ  +  +G    ++    P+N++     P   +  
Sbjct: 126  SPYTFVPSSYPQ--QQPTSLVQPNSQMHV--AGVPPAANTWPVPVNQSTSLVSPVQQTGQ 185

Query: 209  ASAANVQTMPSG---AASSEWREHTSADGRRYYYNKKTKISSWEKPFELMTPVERADAST 268
             +   V T P      ++S+W+EHTSADGR+YYYNK+TK S+WEKP ELMTP+ERADAST
Sbjct: 186  QTPVAVSTDPGNLTPQSASDWQEHTSADGRKYYYNKRTKQSNWEKPLELMTPLERADAST 245

Query: 269  NWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKAS--TLGTEKEPVPLELPSVS 328
             WKEFT+PEG+KYYYNKVTKESKW IPE+LKLARE+A+ AS  T  +E    PL      
Sbjct: 246  VWKEFTTPEGKKYYYNKVTKESKWTIPEDLKLAREQAQLASEKTSLSEAGSTPL------ 305

Query: 329  SLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVETNGVQSPVNIIPSSC 388
            S  A S++   +ST   +  STSS           +SP         G+  PV   PS  
Sbjct: 306  SHHAASSSDLAVSTVTSVVPSTSSAL-----TGHSSSPIQA------GLAVPVTRPPSVA 365

Query: 389  AISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEETKKDIS-EEKVEFT- 448
             ++    A    E TT++  N L+   A D++   DG +AQ+ E   K++S   K   + 
Sbjct: 366  PVTPTSGAISDTEATTIKGDN-LSSRGADDSN---DGATAQNNEAENKEMSVNGKANLSP 425

Query: 449  MEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIINDKRYGALKTLGER 508
              ++A  ++   Y  KQEAK AFK+LLES NV SDWTW++ ++ I++DKRYGAL+TLGER
Sbjct: 426  AGDKANVEEPMVYATKQEAKAAFKSLLESVNVHSDWTWEQTLKEIVHDKRYGALRTLGER 485

Query: 509  KHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWSKAESIFENDERFL 568
            K AFNE+LGQRKK E EERR +QKKAREEF KMLEE  E++SS++WSKA S+FEND+RF 
Sbjct: 486  KQAFNEYLGQRKKVEAEERRRRQKKAREEFVKMLEECEELSSSLKWSKAMSLFENDQRFK 545

Query: 569  AIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDFIKASSQWRKVQDR 628
            A++R RDR DLFD Y+ EL+ KER KA EE  + + +YR FLE+CD+IKA +QWRK+QDR
Sbjct: 546  AVDRPRDREDLFDNYIVELERKEREKAAEEHRQYMADYRKFLETCDYIKAGTQWRKIQDR 605

Query: 629  LVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERKNRDEFRKMMEEHI 688
            L  D+RC+ LEKIDRL  F+EY+ DLEKEEEE ++++KE +R+AERKNRD FR ++EEH+
Sbjct: 606  LEDDDRCSCLEKIDRLIGFEEYILDLEKEEEELKRVEKEHVRRAERKNRDAFRTLLEEHV 665

Query: 689  AAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEIQKQYRDDKTRIKD 748
            AAGILT K +W DYC+++K+LP Y AVA+NTSGSTPK+LFEDV +E++KQY +DK+ +KD
Sbjct: 666  AAGILTAKTYWLDYCIELKDLPQYQAVASNTSGSTPKDLFEDVTEELEKQYHEDKSYVKD 725

Query: 749  ALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERAREKEEKEAKKRKR 808
            A+K RKI M  SW  +DFK+AIS+D+S   ISD NLKLI+D+L+ R +EKEEKEA+K +R
Sbjct: 726  AMKSRKISMVSSWLFEDFKSAISEDLSTQQISDINLKLIYDDLVGRVKEKEEKEARKLQR 785

Query: 809  LGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIFEEYIAQLKEHAKE 868
            L ++F +LL +FKEI+V SNWEDSK L E SQEY SI DES  + +FEEYI  L+E AKE
Sbjct: 786  LAEEFTNLLHTFKEITVASNWEDSKQLVEESQEYRSIGDESVSQGLFEEYITSLQEKAKE 845

Query: 869  NDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVDNENADGSDTLE-- 928
             + KR EEK RKEK+++E+++RK+K  K  REKERE+E+   K+    E +DG   ++  
Sbjct: 846  KERKRDEEKVRKEKERDEKEKRKDKD-KERREKEREREKEKGKERSKREESDGETAMDVS 905

Query: 929  --SKENRRLGKERSKKQRKRRY--SDEEYSDEDEAGHDRSKKSQSH-KDRKKSRRHASAH 988
               K+ +R GK+R +K R+R +  SDE+ S + +   +  K S+ H  DRKKSR+HA++ 
Sbjct: 906  EGHKDEKRKGKDRDRKHRRRHHNNSDEDVSSDRDDRDESKKSSRKHGNDRKKSRKHANSP 958

Query: 989  DSDGESRHRRHKREHRNGSSKNFDHEELEDGECGD 1002
            +S+ E+RH+R K+E    SS+   ++ELEDGE G+
Sbjct: 966  ESESENRHKRQKKE----SSRRSGNDELEDGEVGE 958

[Close]
BLAST of CmaCh04G004350 vs. TAIR 10
Match: AT1G44910.2 (pre-mRNA-processing protein 40A )

HSP 1 Score: 722.2 bits (1863), Expect = 5.6e-208
Identity = 471/955 (49.32%), Postives = 628/955 (65.76%), Query Frame = 0 

Query: 29  PQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLGQGVPMMNVGMPPPPLAQQPQFSQPVAH- 88
           PQ +  QFRP VP    Q FVP  S  F P G         +PP   +Q PQ+SQP+   
Sbjct: 6   PQSSGTQFRPMVPGQQGQHFVPAASQPFHPYGH--------VPPNVQSQPPQYSQPIQQQ 65

Query: 89  --LPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPELQQAQPLTQPAAIGVPGPGGSGTSLS 148
              P RP +PVH +   Q + +P  Q N+  T    Q QP   P    + G   SG   S
Sbjct: 66  QLFPVRPGQPVHITSSSQAVSVPYIQTNKILTSGSTQPQPNAPP----MTGFATSGPPFS 125

Query: 149 APYNYGP---PQNYNTPTIHPPPHSQAPIVSSGAQLGSSVSVTPLNRARE--QPYATSSI 208
           +PY + P   PQ    PT    P+SQ  +  +G    ++    P+N++     P   +  
Sbjct: 126 SPYTFVPSSYPQ--QQPTSLVQPNSQMHV--AGVPPAANTWPVPVNQSTSLVSPVQQTGQ 185

Query: 209 ASAANVQTMPSG---AASSEWREHTSADGRRYYYNKKTKISSWEKPFELMTPVERADAST 268
            +   V T P      ++S+W+EHTSADGR+YYYNK+TK S+WEKP ELMTP+ERADAST
Sbjct: 186 QTPVAVSTDPGNLTPQSASDWQEHTSADGRKYYYNKRTKQSNWEKPLELMTPLERADAST 245

Query: 269 NWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERAEKAS--TLGTEKEPVPLELPSVS 328
            WKEFT+PEG+KYYYNKVTKESKW IPE+LKLARE+A+ AS  T  +E    PL      
Sbjct: 246 VWKEFTTPEGKKYYYNKVTKESKWTIPEDLKLAREQAQLASEKTSLSEAGSTPL------ 305

Query: 329 SLEAPSTTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVETNGVQSPVNIIPSSC 388
           S  A S++   +ST   +  STSS           +SP         G+  PV   PS  
Sbjct: 306 SHHAASSSDLAVSTVTSVVPSTSSAL-----TGHSSSPIQA------GLAVPVTRPPSVA 365

Query: 389 AISENDSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEETKKDIS-EEKVEFT- 448
            ++    A    E TT++  N L+   A D++   DG +AQ+ E   K++S   K   + 
Sbjct: 366 PVTPTSGAISDTEATTIKGDN-LSSRGADDSN---DGATAQNNEAENKEMSVNGKANLSP 425

Query: 449 MEERAIDQDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIINDKRYGALKTLGER 508
             ++A  ++   Y  KQEAK AFK+LLES NV SDWTW++ ++ I++DKRYGAL+TLGER
Sbjct: 426 AGDKANVEEPMVYATKQEAKAAFKSLLESVNVHSDWTWEQTLKEIVHDKRYGALRTLGER 485

Query: 509 KHAFNEFLGQRKKQEVEERRIKQKKAREEFRKMLEESTEVTSSMRWSKAESIFENDERFL 568
           K AFNE+LGQRKK E EERR +QKKAREEF KMLEE  E++SS++WSKA S+FEND+RF 
Sbjct: 486 KQAFNEYLGQRKKVEAEERRRRQKKAREEFVKMLEECEELSSSLKWSKAMSLFENDQRFK 545

Query: 569 AIERDRDRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDFIKASSQWRKVQDR 628
           A++R RDR DLFD Y+ EL+ KER KA EE  + + +YR FLE+CD+IKA +QWRK+QDR
Sbjct: 546 AVDRPRDREDLFDNYIVELERKEREKAAEEHRQYMADYRKFLETCDYIKAGTQWRKIQDR 605

Query: 629 LVVDERCARLEKIDRLEIFQEYLRDLEKEEEEQRKIQKEELRKAERKNRDEFRKMMEEHI 688
           L  D+RC+ LEKIDRL  F+EY+ DLEKEEEE ++++KE +R+AERKNRD FR ++EEH+
Sbjct: 606 LEDDDRCSCLEKIDRLIGFEEYILDLEKEEEELKRVEKEHVRRAERKNRDAFRTLLEEHV 665

Query: 689 AAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFEDVADEIQKQYRDDKTRIKD 748
           AAGILT K +W DYC+++K+LP Y AVA+NTSGSTPK+LFEDV +E++KQY +DK+ +KD
Sbjct: 666 AAGILTAKTYWLDYCIELKDLPQYQAVASNTSGSTPKDLFEDVTEELEKQYHEDKSYVKD 725

Query: 749 ALKLRKIVMSLSWTLDDFKAAISKDISNPPISDSNLKLIFDELLERAREKEEKEAKKRKR 808
           A+K RKI M  SW  +DFK+AIS+D+S   ISD NLKLI+D+L+ R +EKEEKEA+K +R
Sbjct: 726 AMKSRKISMVSSWLFEDFKSAISEDLSTQQISDINLKLIYDDLVGRVKEKEEKEARKLQR 785

Query: 809 LGDDFFSLLCSFKEISVYSNWEDSKLLFEGSQEYSSIEDESFCKEIFEEYIAQLKEHAKE 868
           L ++F +LL +FKEI+V SNWEDSK L E SQEY SI DES  + +FEEYI  L+E AKE
Sbjct: 786 LAEEFTNLLHTFKEITVASNWEDSKQLVEESQEYRSIGDESVSQGLFEEYITSLQEKAKE 845

Query: 869 NDTKRKEEKARKEKDKEERDRRKEKHRKSEREKEREKEENSKKDGVDNENADGSDTLE-- 928
            + KR EEK RKEK+++E+++RK+K  K  REKERE+E+   K+    E +DG   ++  
Sbjct: 846 KERKRDEEKVRKEKERDEKEKRKDKD-KERREKEREREKEKGKERSKREESDGETAMDVS 905

Query: 929 --SKENRRLGKERSKKQRKRRY--SDEEYSDEDEAGHDRSKKSQSH-KDRKKSRR 962
              K+ +R GK+R +K R+R +  SDE+ S + +   +  K S+ H  DRKKSR+
Sbjct: 906 EGHKDEKRKGKDRDRKHRRRHHNNSDEDVSSDRDDRDESKKSSRKHGNDRKKSRK 922

[Close]
BLAST of CmaCh04G004350 vs. TAIR 10
Match: AT3G19670.1 (pre-mRNA-processing protein 40B )

HSP 1 Score: 671.8 bits (1732), Expect = 8.7e-193
Identity = 465/1026 (45.32%), Postives = 642/1026 (62.57%), Query Frame = 0 

Query: 1    MANNPQYSGLQPLRPPVVGPMDQARAFVPQMTNQQFRPAVPAPHSQQFVPLPSSHFQPLG 60
            MANN QY G+QP + P    +D  R F P M N QF P + AP S+Q   L S +FQ +G
Sbjct: 1    MANNHQYPGIQPFQHPNASSIDLPRGFAPPM-NFQFLPTIQAPQSEQVARLSSQNFQCVG 60

Query: 61   QGVPMMNVGMPPPPLAQQPQFSQPVAHLPPRPCEPVHGSLPPQTIPLPIAQPNRNFTPEL 120
            +G  ++++G PP   A Q   S   +H  P     V     P   P  I+QPN +     
Sbjct: 61   RGGTVLSIGYPPQSYAPQLLQSMHHSHERPSQLNQVQVQHVPLGPPTLISQPNVSIASGT 120

Query: 121  QQAQPLTQPAAIGVPGPGGSGTSLSAPY------NYGPPQNYNTPTIHPPPHSQAPIVSS 180
               QP  Q   IG+PG GG     S P       +  PPQ    P+IH     +A I+ +
Sbjct: 121  SLHQPYVQTPDIGMPGFGGPRALFSYPSATSYEGSRVPPQ-VTGPSIHSQAQQRASIIHT 180

Query: 181  GAQLGSSVSVTPLNRAREQPYATSSIASAANVQTMPSGAASSEWREHTSADGRRYYYNKK 240
             A+  SS+    +N   EQP        AA ++ +PS  A ++W EHTSADGR+Y++NK+
Sbjct: 181  SAE--SSI----MNPTFEQP-------KAAFLKPLPSQKALTDWVEHTSADGRKYFFNKR 240

Query: 241  TKISSWEKPFELMTPVERADASTNWKEFTSPEGRKYYYNKVTKESKWVIPEELKLARERA 300
            TK S+WEKP ELMT  ERADA T+WKE +SP+GRKYYYNK+TK+S W +PEE+K+ RE+A
Sbjct: 241  TKKSTWEKPVELMTLFERADARTDWKEHSSPDGRKYYYNKITKQSTWTMPEEMKIVREQA 300

Query: 301  EKASTLGTEKEPVPLELPSVSSLEAPSTTADTMSTA--KGLASSTSS---VAAIDLQND- 360
            E AS  G   E        +       T +DT STA   GL S TS+   V  + L +D 
Sbjct: 301  EIASVQGPHAE-------GIIDASEVLTRSDTASTAAPTGLPSQTSTSEGVEKLTLTSDL 360

Query: 361  --KDTSPAAVSSVE-TNGVQSPVNIIPSSCAISENDSAAGAVEDT---TVEPRNDLNQSS 420
                + P + S VE  + VQ   +     C  SE D  +  V +T   T+  +++++  +
Sbjct: 361  KQPASVPGSSSPVENVDRVQMSADETSQLCDTSETDGLSVPVTETSAATLVEKDEISVGN 420

Query: 421  AQDTDSLI-----DGVSAQDLEETKKDISEEKVEFTMEERAIDQDTSAYPNKQEAKNAFK 480
            + D+D +       G  +   E  K  +  EKVE   EE+ I Q++ ++ NK EA + FK
Sbjct: 421  SGDSDDMSTKNANQGSGSGPKESQKPMVESEKVESQTEEKQIHQESFSFNNKLEAVDVFK 480

Query: 481  ALLESANVGSDWTWDRAMRIIINDKRYGALKTLGERKHAFNEFLGQRKKQEVEERRIKQK 540
            +LL+SA VGSDWTW++AMR IINDKRYGAL+TLGERK AFNEFL Q K+   EER  +QK
Sbjct: 481  SLLKSAKVGSDWTWEQAMREIINDKRYGALRTLGERKQAFNEFLLQTKRAAEEERLARQK 540

Query: 541  KAREEFRKMLEESTEVTSSMRWSKAESIFENDERFLAIERDRDRRDLFDGYLEELKNKER 600
            K  E+F++MLEE  E+T S RWSK  ++FE+DERF A+ER++DRR++F+ ++ ELK K R
Sbjct: 541  KLYEDFKRMLEECVELTPSTRWSKTVTMFEDDERFKALEREKDRRNIFEDHVSELKEKGR 600

Query: 601  AKAQEERSRNILEYRTFLESCDFIKASSQWRKVQDRLVVDERCARLEKIDRLEIFQEYLR 660
             KA E+R RNI+EY+ FLESC+FIK +SQWRKVQDRL VDERC+RLEKID+LEIFQEYLR
Sbjct: 601  VKALEDRKRNIIEYKRFLESCNFIKPNSQWRKVQDRLEVDERCSRLEKIDQLEIFQEYLR 660

Query: 661  DLEKEEEEQRKIQKEELRKAERKNRDEFRKMMEEHIAAGILTPKIHWRDYCMKVKELPAY 720
            DLE+EEEE++KIQKEEL+K ERK+RDEF  +++EHIA G LT K  WRDY MKVK+LP Y
Sbjct: 661  DLEREEEEKKKIQKEELKKVERKHRDEFHGLLDEHIATGELTAKTIWRDYLMKVKDLPVY 720

Query: 721  LAVAANTSGSTPKNLFEDVADEIQKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAISK 780
             A+A+N+SG+TPK+LFED  ++++K+  + K++IKD LKLRK+ +S   T D+FK +IS+
Sbjct: 721  SAIASNSSGATPKDLFEDAVEDLKKRDHELKSQIKDVLKLRKVNLSAGSTFDEFKVSISE 780

Query: 781  DISNPPISDSNLKLIFDELLERAREKEEKEAKKRKRLGDDFFSLLCSFKEISVYSNWEDS 840
            DI  P I D  LKL+FD+LLERA+EKEEKEA+K+ R  +    +L SFK+I+  S+WE+ 
Sbjct: 781  DIGFPLIPDVRLKLVFDDLLERAKEKEEKEARKQTRQTEKLVDMLRSFKDITASSSWEEL 840

Query: 841  KLLFEGSQEYSSIEDESFCKEIFEEYIAQLKEHAKENDTKRKEEKARKEKDKEERDRRKE 900
            K L EGS++ S+I DESF K  FE+Y++ LKE +     + K+ K   E  +EE D+ ++
Sbjct: 841  KHLVEGSEKCSTIGDESFRKRCFEDYVSLLKEQS----NRIKQNKKVPEDVREEHDKGRD 900

Query: 901  KH-RKSEREKEREKEENSKKDGVDNENADGSDTLESKENRRLGKERSKKQRKRRYSDEEY 960
            K+ R+ +R +ER+ +++ KK      N D ++    KE RR G++   + R+R  S +E 
Sbjct: 901  KYGREKDRVRERDSDDHHKKGAAGKYNHDMNEP-HGKERRRSGRDSHNRHRERHTSVKE- 960

Query: 961  SDEDEAGHDRSKKSQSHKDRKKSRRHASAHDSDGESRHRRHK--REHRNGSSKNFDHEEL 1001
             ++ +   +  K    HK  +  R   S  + +G+ + RR +  REH          EEL
Sbjct: 961  -NDTDHFKESHKAGGGHKKSRHQRGWVSEAEVEGKEKRRRKEEAREHTK-------EEEL 990

[Close]
BLAST of CmaCh04G004350 vs. TAIR 10
Match: AT3G19840.1 (pre-mRNA-processing protein 40C )

HSP 1 Score: 92.0 bits (227), Expect = 2.8e-18
Identity = 193/811 (23.80%), Postives = 328/811 (40.44%), Query Frame = 0 

Query: 53  SSHFQPLGQGVPMM--------NVGMPPPPLAQQPQF--SQPVAHLPPRPCEPVHGSLPP 112
           SS+  P+ Q  PM+            PP  +   P F  S P +  P     P   + P 
Sbjct: 76  SSNVNPIPQASPMLANAPFGRPGTLAPPGLMTSPPAFPGSNPFSTTP----RPGMSAGPA 135

Query: 113 QTIP--LPIAQPNRNFTPELQQAQPLTQPAAIGVPGPGGSGTSLSAPYNYGPPQ---NYN 172
           Q  P   P   P  +  P   Q   L  P+  G+P         + P +Y  P    + N
Sbjct: 136 QMNPGIHPHMYPPYHSLPGTPQGMWLQPPSMGGIPRAPFLSHPTTFPGSYPFPVRGISPN 195

Query: 173 TPTIHPPPHSQAPIVSSG---AQLGSSVSVTPLNRAREQPYATSSIASAANVQTMPSGAA 232
            P     P   +P+ S G   A  G    ++P  +  E     S I   A  Q +  G  
Sbjct: 196 LPYSGSHPLGASPMGSVGNVHALPGRQPDISPGRKTEE----LSGIDDRAGSQLV--GNR 255

Query: 233 SSEWREHTSADGRRYYYNKKTKISSWEKPFEL-----MTPVERADAS------TNWKEFT 292
              W  H S  G  YYYN  T  S++EKP          PV+    S      T+W   +
Sbjct: 256 LDAWTAHKSEAGVLYYYNSVTGQSTYEKPPGFGGEPDKVPVQPIPVSMESLPGTDWALVS 315

Query: 293 SPEGRKYYYNKVTKESKWVIPEELK-LARERAEKA--STLGTEKEPVPLELPSVSSLEAP 352
           + +G+KYYYN  TK S W IP E+K   ++  E+A  S        +  +   ++SL AP
Sbjct: 316 TNDGKKYYYNNKTKVSSWQIPAEVKDFGKKLEERAMESVASVPSADLTEKGSDLTSLSAP 375

Query: 353 STTADTMSTAKGLASSTSSVAAIDLQNDKDTSPAAVSSVETNGVQSPVNIIPSSCAISEN 412
           + +      A  L ++    +A+DL   K         +  +G       +P S  I+  
Sbjct: 376 AISNGGRDAA-SLKTTNFGSSALDLVKKK---------LHDSG-------MPVSSTIT-- 435

Query: 413 DSAAGAVEDTTVEPRNDLNQSSAQDTDSLIDGVSAQDLEETKKDISEEKVEFTMEERAID 472
            S A + + T V P  +    S   T  + D   A  L ++  D                
Sbjct: 436 -SEANSGKTTEVTPSGE----SGNSTGKVKDAPGAGALSDSSSD---------------S 495

Query: 473 QDTSAYPNKQEAKNAFKALLESANVGSDWTWDRAMRIIINDKRYGALKTLGERKHAFNEF 532
           +D  + P+K+E    FK +L+   +     W++ +  II D R+ A+ +   R+  F ++
Sbjct: 496 EDEDSGPSKEECSKQFKEMLKERGIAPFSKWEKELPKIIFDPRFKAIPSHSVRRSLFEQY 555

Query: 533 LGQRKKQEVEERRIKQKKAREEFRKMLEE-STEVTSSMRWSKAESIFENDERFLAIERDR 592
           +  R ++E  E+R   K A E FR++L++ ST++     +   +  + ND RF AIER +
Sbjct: 556 VKTRAEEERREKRAAHKAAIEGFRQLLDDASTDIDQHTDYRAFKKKWGNDLRFEAIER-K 615

Query: 593 DRRDLFDGYLEELKNKERAKAQEERSRNILEYRTFLESCDFIKASSQWRKVQDRLVVDER 652
           +R  L +  +  LK     KAQE R+    +++T L   + I  +S W KV+D L  + R
Sbjct: 616 EREGLLNERVLSLKRSAEQKAQEIRAAAASDFKTMLRERE-ISINSHWSKVKDSLRNEPR 675

Query: 653 CARLEKIDRLEIFQEYLRDLE------------KEEEEQRKIQKEELRKAERKNRDEFRK 712
              +   DR   + EY+ +L+            ++EE++ + ++ ELRK + +   E  +
Sbjct: 676 YRSVAHEDREVFYYEYIAELKAAQRGDDHEMKARDEEDKLRERERELRKRKEREVQEVER 735

Query: 713 MMEE------------HIAAGILTPKIHWRDYCMKVKELPAYLAVAANTSGSTPKNLFED 772
           + ++             +   I  P+  W +    ++  P   A   +   +  + LF D
Sbjct: 736 VRQKIRRKEASSSYQALLVEKIRDPEASWTESKPILERDPQKRASNPDLEPADKEKLFRD 795

Query: 773 -VADEIQKQYRDDKTRIKDALKLRKIVMSLSWTLDDFKAAI-----SKDISNPPISDSNL 792
            V    ++   D K  + +AL      +      +D K A+     +K +  P I  S +
Sbjct: 796 HVKSLYERCVHDFKALLAEALSSEAATLQ----TEDGKTALNSWSTAKQVLKPDIRYSKM 831

The following BLAST results are available for this feature:
BLAST of CmaCh04G004350 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B6EUA93.0e-21449.15Pre-mRNA-processing protein 40A OS=Arabidopsis thaliana OX=3702 GN=PRP40A PE=1 S... [more]
F4JCC11.2e-19145.32Pre-mRNA-processing protein 40B OS=Arabidopsis thaliana OX=3702 GN=PRP40B PE=1 S... [more]
Q9R1C71.1e-6731.21Pre-mRNA-processing factor 40 homolog A OS=Mus musculus OX=10090 GN=Prpf40a PE=1... [more]
O754002.7e-6631.09Pre-mRNA-processing factor 40 homolog A OS=Homo sapiens OX=9606 GN=PRPF40A PE=1 ... [more]
Q6NWY91.2e-4827.49Pre-mRNA-processing factor 40 homolog B OS=Homo sapiens OX=9606 GN=PRPF40B PE=1 ... [more]
BLAST of CmaCh04G004350 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IK680.0e+00100.00pre-mRNA-processing protein 40A-like isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1IK890.0e+0099.90pre-mRNA-processing protein 40A-like isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1FVB10.0e+0098.11pre-mRNA-processing protein 40A-like isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1FNZ10.0e+0098.01pre-mRNA-processing protein 40A-like isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A0A0KSY70.0e+0087.31Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G000610 PE=4 SV=1[more]
BLAST of CmaCh04G004350 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022977536.10.0e+00100.00pre-mRNA-processing protein 40A-like isoform X1 [Cucurbita maxima] >XP_022977544... [more]
XP_022977551.10.0e+0099.90pre-mRNA-processing protein 40A-like isoform X2 [Cucurbita maxima][more]
KAG7030933.10.0e+0098.71Pre-mRNA-processing protein 40A, partial [Cucurbita argyrosperma subsp. argyrosp... [more]
KAG6600273.10.0e+0098.61Pre-mRNA-processing protein 40A, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_023536653.10.0e+0098.71pre-mRNA-processing protein 40A-like isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
BLAST of CmaCh04G004350 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G44910.12.1e-21549.15pre-mRNA-processing protein 40A [more]
AT1G44910.25.6e-20849.32pre-mRNA-processing protein 40A [more]
AT3G19670.18.7e-19345.32pre-mRNA-processing protein 40B [more]
AT3G19840.12.8e-1823.80pre-mRNA-processing protein 40C [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 773..797
NoneNo IPR availableCOILSCoilCoilcoord: 840..892
NoneNo IPR availableCOILSCoilCoilcoord: 632..667
NoneNo IPR availableCOILSCoilCoilcoord: 565..592
NoneNo IPR availableCOILSCoilCoilcoord: 415..435
NoneNo IPR availableGENE3D2.20.70.10coord: 255..299
e-value: 2.2E-15
score: 57.7
NoneNo IPR availableGENE3D2.20.70.10coord: 198..254
e-value: 1.6E-14
score: 55.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 852..1006
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 983..1006
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 393..411
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 381..424
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 927..949
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 852..919
NoneNo IPR availablePANTHERPTHR11864:SF25PRE-MRNA-PROCESSING PROTEIN 40Bcoord: 2..1000
IPR002713FF domainSMARTSM00441FF_2coord: 658..719
e-value: 19.0
score: 6.3
coord: 516..571
e-value: 2.0E-13
score: 60.6
coord: 449..503
e-value: 2.1E-10
score: 50.6
coord: 791..846
e-value: 0.18
score: 20.9
coord: 584..638
e-value: 0.049
score: 22.8
IPR002713FF domainPFAMPF01846FFcoord: 518..568
e-value: 1.1E-15
score: 57.5
coord: 589..635
e-value: 5.1E-5
score: 23.4
coord: 660..715
e-value: 1.4E-7
score: 31.5
coord: 451..500
e-value: 1.8E-13
score: 50.4
IPR002713FF domainPROSITEPS51676FFcoord: 656..719
score: 9.555087
IPR002713FF domainPROSITEPS51676FFcoord: 516..571
score: 12.890266
IPR002713FF domainPROSITEPS51676FFcoord: 584..638
score: 10.744935
IPR002713FF domainPROSITEPS51676FFcoord: 791..846
score: 8.707771
IPR002713FF domainPROSITEPS51676FFcoord: 449..503
score: 10.979299
IPR001202WW domainSMARTSM00456ww_5coord: 254..286
e-value: 4.1E-8
score: 43.0
coord: 213..245
e-value: 7.3E-9
score: 45.4
IPR001202WW domainPFAMPF00397WWcoord: 258..284
e-value: 3.4E-8
score: 33.4
coord: 216..243
e-value: 1.3E-9
score: 38.0
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 218..243
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 253..286
score: 13.082601
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 212..245
score: 13.3387
IPR001202WW domainCDDcd00201WWcoord: 257..286
e-value: 7.03499E-9
score: 50.219
IPR001202WW domainCDDcd00201WWcoord: 216..243
e-value: 9.84837E-10
score: 52.5302
IPR036517FF domain superfamilyGENE3D1.10.10.440FF domaincoord: 785..858
e-value: 2.8E-15
score: 57.9
IPR036517FF domain superfamilyGENE3D1.10.10.440FF domaincoord: 579..647
e-value: 1.9E-10
score: 42.8
coord: 505..578
e-value: 2.8E-19
score: 71.1
coord: 648..730
e-value: 6.5E-13
score: 50.7
IPR036517FF domain superfamilyGENE3D1.10.10.440FF domaincoord: 449..504
e-value: 1.7E-20
score: 74.7
IPR036517FF domain superfamilySUPERFAMILY81698FF domaincoord: 651..726
IPR036517FF domain superfamilySUPERFAMILY81698FF domaincoord: 577..645
IPR036517FF domain superfamilySUPERFAMILY81698FF domaincoord: 445..503
IPR036517FF domain superfamilySUPERFAMILY81698FF domaincoord: 509..577
IPR036517FF domain superfamilySUPERFAMILY81698FF domaincoord: 784..853
IPR039726Pre-mRNA-processing factor Prp40PANTHERPTHR11864PRE-MRNA-PROCESSING PROTEIN PRP40coord: 2..1000
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 217..251
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 246..287

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G004350.1CmaCh04G004350.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045292 mRNA cis splicing, via spliceosome
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding