CmaCh04G004050 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G004050
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionpolyadenylate-binding protein 2-like
LocationCma_Chr04: 2067792 .. 2072260 (+)
RNA-Seq ExpressionCmaCh04G004050
SyntenyCmaCh04G004050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGAGAGGGAGGGATAAACTCAGAAAGACGAAGGGGCGGAGGGACGGAGGAGAATCCATGGAGCACGAAGACTTCGACATGATTGGCTCGGACCTCAACGATACGGTGGTTCGTTTTTCCTTTTCAATCCTTTTTCTCTTTTATTTCGATTCTTATTCATCAATCCTTGACTACTTTCAGCCTACTTACTATAAACCCTAATTCCTTTCTTTTCTCCTGCTTTGTGCCTTGTAATCGGCTTTCAGGAGTTGGACGACATGACGAAACGGTTGAAAGAGATGGAAAATGAAGCTGCTGCCCTGCGTGAGATGCAGGCCAAGGTCGAGAAGGAGATGAGTTCTCTACAAGGTTGGTTTCTGCTCTTCTTCGCTTTTGTGAGGTTCTTTTTGTGTTTTTGTGAAGCCCGTCCAGTGTGTGCTTATTTAAGATTGTCTTTATTGGATCCTTTTTAGTGAATACTGAATTAGTAAGTCGAGTTTTGGGCTGGAATTGGTATTTCTTTGATCCTGAAGGTCGTCTTTTGATCGGATGGGAACTGAAAATGTTTAGGAAATGCCTAATCTTGTAAGAACTAGGTGCATTTGGATTTTGTATTGGAGCGATGCAGTAACTGAGCAACCGGATTTTGGACTATCCGCTATTTAGAGATGATTAGTTTTCATCTTGATCATAGTGGTAGTTTCTAATTAAGAGAAGTTGGCTAGTGTACTGATTTTTGTTTTTTGAAAAATACCAACTTTGGAATTGAGATCAGAATCTCAGTCATGTCAATTATGGAGATTTTATTCTGTGTTGATTATCCAGTACATGTTTTTTTACCTAAATACATACGCTTACTTGAAAAGTTCTATTTTGTCTGTTATCGTCAAATATTTCACCACTTTTTGTTTCACTAGATCCAGCAAGTTCTGCTGCAAGTCAAGCAAACAGGGAGGAAGTGGATGCACGGTCAGTGTTTGTTGGCAATGTACGTTCTCTTTATCCCTGACTAACATTACTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATATTNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTCATATTAATGCTGTCGTGTTGCTTGCTTTGGTCAGTCATACTACATAAGTAGTTGAATTTTGATTTATAGGTGAAAGGATTCTTTTTGTTCATGTTAAATTCTTGAACAATATCAGCTTTGTTTCTGTTTGAGACTTAGCTCACCTAAAGAAGAAGGCTATATATTTCCATTTAATGACAAACTAACCAATTCTTATGTCTTCACAATGTATGACATTGGAGGGCCTCTTTTTTTTTTTTTTTTCTTTTTTTGTACGGGGTGTAGCTAGTTCGTATGGAGGGCTGAATTCCAGTTATTCTTTCTTTCACGAAATCAAGTCATGTGCGGTTAATTTCAAATTGTGATGGAATGCAACCATCAATTTATCAACTCTAGTAGCTTATGGAGGGAAACACATGGAATGCCATTAATTTAACCCTTCTCTCCATTTTCTTAGTTGTTTCATTGTTTGAAATACTTTAACATTATTTTTTCACACTACCTCATATTGTTACACAATTTGTTAGTTCTAACATTTTAAATTGTTATGATGGGAAGCTTGACTTGTTCTTCTTTTAGAGAAGGTACTTACAGAAAAACTATATTCTTTGTTTAACAATTAAAAGAGTTTTCTTAGCTTTGTTTTCTTTGAGTCCGTTTATTTAATTCTTGCAACTTCAACTAACTGACTTTCATTCCTTGGGGGTCTGCTCATTCCTTGTAGGGTCATTAAGGTTTATTGAATTTCAGTTAGCCATGAGTTTTTGTTTATTTTGGTACATATCATTCATGTCTTTGGAAGAGGTAGGATGATGCCTTTCATTTTGAGGATGTTGATCCGTTGGTTGCAAGCAGTACTATTTTAGTGGTGTTAGGAGGGATCATTGTATTATTATCTATCGCTCTTCCTTTTAGGAGCTTTGAGACCCATAACTACTTATGTTCAATGGAACATTTTCTGTAGAGATTATTGCTATAAATTCAATTAAATTCAGATAGTTTCTATTTAAGTTTTATAGATGACCCATTCCTGCATTGTGCTTGAAATTTTTAGCATGCTGGTGTTTCTAGCCTCATTTGACTCCTGTCTTTGACTGCAATTACAGGCTAGGCTTACTTCATCAGGTTTTCTGATTACCAATTGCCGAAGTTGGAAATTCTCTGATATGTTATAAAATACCTATCTATATTTTAAAAAGTGTCTTGTCCTAAAAAAACAAGTAGATAAAAAAAAGTGATAAATTTCAGGTGTAAAATTTTCAAGAGGGTAAAAGTTCGATTGAATCCTTTGAAAAGAGTGGGAAAATGTTGAGATGAGTTAACCAGAAGAAAAGATATACCTAAATGTCTTGTAGTTCATTGTGCCTTGTTGGCTTATTAGGTGGGCTGGGATTCTGTCAATATAAAATGTCTCAAGTTCTAGGCCATGTGGGTAATGTGGAAAGGGGGTTAGTAAAAAAAGAAGAGAGCAAACTCACTAGAATAAGGGTATGCTCGACTATGGATAAAGTCAGCAGAAGTTTTACTGGTTTGCTTGATTGAACTGGAATGAGGAGAGGACTCGACAAGTGTTGAAGGGAAGTTATGTGCATTCATAACTAAGGAGGACTAGCTATGGCGCTAAGGTATGTTATTGTCTTGTGTTGAAGCCAGCATTGGTGACTACTGTTCCAGTTTTGTTTAAGTGATTTACAATCTATGGTGAGGGGCCTCCAAATATCTCTCATTATGCTGTCTACCCCACCCTTAATCCATCAAGGAAAGTAATTAACCAATACATTGTCGTTGTGTGATGAACACACATTCTATTATAATCACGTGTCAAAAAAATTATTAGTCGTCCAGGATTTACAAGAATGAATATGAAGGAATTAGAGTTACATGGTGGTTGCTTGTCTTCTAGTGAATGGGTGTCCCCTATTGTTATGAATGATTGGGACCCAACTTGGTTCTTTACAAGGTTGATGTGTATAATATGTACTGACTATCATTCATTTCAGTGAATATTTGATATTTTTATGTGAAGAAGATAGCTGAGAGATTGTGTAGAACTTGTGGCAACTGACTTGCTGCTTATATTTCATTTAATAACTTGATTTCCTGAAGAAAATTTCTCCATACAGTAATTATGAATGTGTGTGCTGTATTTTATTGATTAATGTTCTGAGCTTCAACTGGAACAGGTTGACTACTCATGTACCCCAGAAGAAGTACAGCAACATTTCCAGACATGTGGAACTGTAAACAGAATTACTATTCGCACAGATAAGTTCGGGCAGCCGAAGGGTTACGCGTATGTTGAATTCCTTGAGCCTGAAGCTGTTCAAGAGGCTCTTCTTCTGAATGAATCAGAACTACATGGTCGACAGCTGAAGGTTAACTTAATAAATTACTTGATAGTGTTAGTTTAAGATTCTCCTACTGATTTTTTAGGCACATTGTTGGACAAAACTGAATTTATATGTTTTAGGTAACTGCCAAGAGGACAAACATACCTGGGATGAAGCAGTATCGTCCACGCCGACCCAACTCATTTATGGGTGCTCAATCCAGGAGCCCATATGTTGCTGCTCCTTATTTCTTCGCACCATATGGATATGGGTATGATTATTCAATACAAATTTCCCAAGCTCACAGCTTGAATCTTTAACTCTCTTGTCATTTAGCATAGTTCTCTACCTGTTGCAGGAAAGTTCCGAGGTTCAGAATGCCAACGCGTTACGGCCCCTACTATTGAATGCTAATTTTGTTCAAGACATTGTTGAATTAGAGATATCACACTTAAATGTCTGCATGCCCTTTTCTTTATTTATTATGATGGAAATTGATGTTTGGATAAAATCGAAATGGAGTGTGAGCGAGCACGATGCAGGTTCAATCACTAGAACAAAGCTCTACCATGCGCAGCCATTACTATGTAAAGACAAAGGCTTCTCTGGACTCGCTGCAGGTAAGCTTGTAAGATTTAAGTATTCACCTTGGAATTGTGCATCGAGTTTGAAGATGACGATGCAACAAAATGCATACTGAACAGTTTATATATTTAGTGCTTGCTGCTATTTTTATTTAATTCTGTGTCGAGATTTATTGACTTTTGTTTGCCCCATCTGCTCCGTCAGTTGTGAAGTTCGTTCTTGTTTGAAGAACAATAATCGAGGGATCGAACCGGTGAGTAATCCCCCTAAGTGTCATTTTTTGATTGGTTGCTTTCTCTGAGTTTACTTACTTGAACATAGTTCCAGATTTTAGTATTAGCATTCTTGTTTCTTCATAGATTGTAAGTTTTTATTTGTTTTCTTTATGATTCTATTTCATTTCCTTCCCGCTTATGTAATGCAATAATATTTTTTTTATTAAATTATTTATTTTATAAAATAAATAAATAAAGCTTGAAGGGTCCCTTTTCCC

mRNA sequence

GGAGAGGGAGGGATAAACTCAGAAAGACGAAGGGGCGGAGGGACGGAGGAGAATCCATGGAGCACGAAGACTTCGACATGATTGGCTCGGACCTCAACGATACGGAGTTGGACGACATGACGAAACGGTTGAAAGAGATGGAAAATGAAGCTGCTGCCCTGCGTGAGATGCAGGCCAAGGTCGAGAAGGAGATGAGTTCTCTACAAGATCCAGCAAGTTCTGCTGCAAGTCAAGCAAACAGGGAGGAAGTGGATGCACGGTCAGTGTTTGTTGGCAATGTTGACTACTCATGTACCCCAGAAGAAGTACAGCAACATTTCCAGACATGTGGAACTGTAAACAGAATTACTATTCGCACAGATAAGTTCGGGCAGCCGAAGGGTTACGCGTATGTTGAATTCCTTGAGCCTGAAGCTGTTCAAGAGGCTCTTCTTCTGAATGAATCAGAACTACATGGTCGACAGCTGAAGGTAACTGCCAAGAGGACAAACATACCTGGGATGAAGCAGTATCGTCCACGCCGACCCAACTCATTTATGGGTGCTCAATCCAGGAGCCCATATGTTGCTGCTCCTTATTTCTTCGCACCATATGGATATGGGAAAGTTCCGAGGTTCAGAATGCCAACGCGTTACGGCCCCTACTATTGAATGCTAATTTTGTTCAAGACATTGTTGAATTAGAGATATCACACTTAAATGTCTGCATGCCCTTTTCTTTATTTATTATGATGGAAATTGATGTTTGGATAAAATCGAAATGGAGTGTGAGCGAGCACGATGCAGGTTCAATCACTAGAACAAAGCTCTACCATGCGCAGCCATTACTATGTAAAGACAAAGGCTTCTCTGGACTCGCTGCAGTTGTGAAGTTCGTTCTTGTTTGAAGAACAATAATCGAGGGATCGAACCGGTGAGTAATCCCCCTAAGTGTCATTTTTTGATTGGTTGCTTTCTCTGAGTTTACTTACTTGAACATAGTTCCAGATTTTAGTATTAGCATTCTTGTTTCTTCATAGATTGTAAGTTTTTATTTGTTTTCTTTATGATTCTATTTCATTTCCTTCCCGCTTATGTAATGCAATAATATTTTTTTTATTAAATTATTTATTTTATAAAATAAATAAATAAAGCTTGAAGGGTCCCTTTTCCC

Coding sequence (CDS)

ATGGAGCACGAAGACTTCGACATGATTGGCTCGGACCTCAACGATACGGAGTTGGACGACATGACGAAACGGTTGAAAGAGATGGAAAATGAAGCTGCTGCCCTGCGTGAGATGCAGGCCAAGGTCGAGAAGGAGATGAGTTCTCTACAAGATCCAGCAAGTTCTGCTGCAAGTCAAGCAAACAGGGAGGAAGTGGATGCACGGTCAGTGTTTGTTGGCAATGTTGACTACTCATGTACCCCAGAAGAAGTACAGCAACATTTCCAGACATGTGGAACTGTAAACAGAATTACTATTCGCACAGATAAGTTCGGGCAGCCGAAGGGTTACGCGTATGTTGAATTCCTTGAGCCTGAAGCTGTTCAAGAGGCTCTTCTTCTGAATGAATCAGAACTACATGGTCGACAGCTGAAGGTAACTGCCAAGAGGACAAACATACCTGGGATGAAGCAGTATCGTCCACGCCGACCCAACTCATTTATGGGTGCTCAATCCAGGAGCCCATATGTTGCTGCTCCTTATTTCTTCGCACCATATGGATATGGGAAAGTTCCGAGGTTCAGAATGCCAACGCGTTACGGCCCCTACTATTGA

Protein sequence

MEHEDFDMIGSDLNDTELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGPYY
Homology
[Close]
BLAST of CmaCh04G004050 vs. ExPASy Swiss-Prot
Match: Q9FJN9 (Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PABN2 PE=1 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 1.2e-71
Identity = 142/193 (73.58%), Postives = 164/193 (84.97%), Query Frame = 0 

Query: 5   DFDMIGSDLNDT-ELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQANRE 64
           D DM  +D +   ELD+M KRLKEME+EAAALREMQAKVEKEM + QDPAS AA+QA +E
Sbjct: 29  DLDMAAADDDAVKELDEMKKRLKEMEDEAAALREMQAKVEKEMGA-QDPASIAANQAGKE 88

Query: 65  EVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPEAVQE 124
           EVDARSVFVGNVDY+CTPEEVQQHFQTCGTV+R+TI TDKFGQPKG+AYVEF+E EAVQE
Sbjct: 89  EVDARSVFVGNVDYACTPEEVQQHFQTCGTVHRVTILTDKFGQPKGFAYVEFVEVEAVQE 148

Query: 125 ALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGK 184
           AL LNESELHGRQLKV  KRTN+PG+KQ+R RR N +MG + R P++ +PY ++PYGYGK
Sbjct: 149 ALQLNESELHGRQLKVLQKRTNVPGLKQFRGRRFNPYMGYRFRRPFM-SPYMYSPYGYGK 208

Query: 185 VPRFRMPTRYGPY 197
            PRFR P RY PY
Sbjct: 209 APRFRRPMRYMPY 219

[Close]
BLAST of CmaCh04G004050 vs. ExPASy Swiss-Prot
Match: Q9LX90 (Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PABN3 PE=1 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 2.7e-71
Identity = 141/193 (73.06%), Postives = 159/193 (82.38%), Query Frame = 0 

Query: 5   DFDMIGSDLND-TELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQANRE 64
           D DM  +D +  TEL +M +RLKEME EAAALREMQAKVEKEM + QDPAS AA+Q  +E
Sbjct: 25  DIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQAKVEKEMGATQDPASMAANQEGKE 84

Query: 65  EVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPEAVQE 124
           EVDARSV+VGNVDY+CTPEEVQ HFQTCGTVNR+TI  DKFGQPKG+AYVEF+E EAVQE
Sbjct: 85  EVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQE 144

Query: 125 ALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGK 184
           AL LNESELHGRQLKV+ KRTN+PGMKQY P R N  MG + R P+V  PYF++PYGYGK
Sbjct: 145 ALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNPSMGYRFRRPFV-PPYFYSPYGYGK 204

Query: 185 VPRFRMPTRYGPY 197
            PRFR P RY PY
Sbjct: 205 APRFRRPMRYMPY 216

[Close]
BLAST of CmaCh04G004050 vs. ExPASy Swiss-Prot
Match: Q93VI4 (Polyadenylate-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=PABN1 PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.8e-60
Identity = 121/181 (66.85%), Postives = 146/181 (80.66%), Query Frame = 0 

Query: 17  ELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVD 76
           +L+DM KR+KE+E EA ALREMQAK EK+M + QDP S   S A +EEVD+RS++VGNVD
Sbjct: 53  DLEDMKKRIKEIEEEAGALREMQAKAEKDMGASQDP-SGGVSAAEKEEVDSRSIYVGNVD 112

Query: 77  YSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQ 136
           Y+CTPEEVQQHFQ+CGTVNR+TI TDKFGQPKG+AYVEF+E EAVQ +L+LNESELHGRQ
Sbjct: 113 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQ 172

Query: 137 LKVTAKRTNIPGMKQYRPR-RPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGP 196
           +KV+AKRTN+PGM+Q+R R RP  F   +   P V    F+ PY YG+VPRFR P RY P
Sbjct: 173 IKVSAKRTNVPGMRQFRGRGRP--FRPMRGFMPGVP---FYPPYAYGRVPRFRRPMRYRP 227

[Close]
BLAST of CmaCh04G004050 vs. ExPASy Swiss-Prot
Match: O14327 (Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pab2 PE=1 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.2e-34
Identity = 87/174 (50.00%), Postives = 111/174 (63.79%), Query Frame = 0 

Query: 7   DMIGSDLNDTELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQANREEVD 66
           D    D  + EL +M +R+ EME EAA LR MQ +++ E  +L++         ++E +D
Sbjct: 3   DQDALDTQEKELLEMKERVAEMEAEAAKLRAMQEQLDNETEALRN---------DKESID 62

Query: 67  ARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKF-GQPKGYAYVEFLEPEAVQEAL 126
           A+SV+VGNVDYS TPEE+Q HF +CG+VNR+TI  DKF G PKG+AY+EF EP  V  AL
Sbjct: 63  AQSVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNAL 122

Query: 127 LLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY 180
           LLN S LH R LKVT KRTN+PGM + R R      G + R  Y      FAPY
Sbjct: 123 LLNGSMLHERPLKVTPKRTNVPGMSRGRGRGRGRGRG-RGRGGYRGRARGFAPY 166

[Close]
BLAST of CmaCh04G004050 vs. ExPASy Swiss-Prot
Match: Q9DDY9 (Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 6.8e-30
Identity = 82/193 (42.49%), Postives = 119/193 (61.66%), Query Frame = 0 

Query: 2   EHEDFDMIGSD-LNDTELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSA---A 61
           E E  ++ G   + D EL+ +  R++EME EA  L+E+Q +VEK+M+    P ++     
Sbjct: 93  EEEPGELTGDQTIEDPELEAIKARVREMEEEAEKLKELQNEVEKQMNMSPPPGNAGPVIM 152

Query: 62  SQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKF-GQPKGYAYVEFL 121
           S   + E DARS++VGNVDY  T EE++ HF  CG+VNR+TI  DKF G PKG+AY+EF 
Sbjct: 153 SVEEKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKGFAYIEFC 212

Query: 122 EPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFF 181
           + E+V+ +L L+ES   GRQ+KV  KRTN PG+       P +   A++ S Y +   F+
Sbjct: 213 DKESVRTSLALDESLFRGRQIKVVPKRTNRPGISTTDRGFPRARYRARA-SSYSSRSRFY 272

Query: 182 APYGYGKVPRFRM 190
           +  GY   PR R+
Sbjct: 273 S--GYTPRPRGRV 282

[Close]
BLAST of CmaCh04G004050 vs. ExPASy TrEMBL
Match: A0A6J1JL28 (polyadenylate-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486168 PE=4 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 9.7e-104
Identity = 197/198 (99.49%), Postives = 197/198 (99.49%), Query Frame = 0 

Query: 1   MEHEDFDMIGSDLNDT-ELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQ 60
           MEHEDFDMIGSDLNDT ELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQ
Sbjct: 1   MEHEDFDMIGSDLNDTVELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQ 60

Query: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPE 120
           ANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPE
Sbjct: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPE 120

Query: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY 180
           AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY
Sbjct: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY 180

Query: 181 GYGKVPRFRMPTRYGPYY 198
           GYGKVPRFRMPTRYGPYY
Sbjct: 181 GYGKVPRFRMPTRYGPYY 198

[Close]
BLAST of CmaCh04G004050 vs. ExPASy TrEMBL
Match: A0A6J1FRU1 (polyadenylate-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111447876 PE=4 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 3.7e-103
Identity = 196/198 (98.99%), Postives = 197/198 (99.49%), Query Frame = 0 

Query: 1   MEHEDFDMIGSDLNDT-ELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQ 60
           MEHEDFDMIGSDLNDT ELDDMTKRLKEME+EAAALREMQAKVEKEMSSLQDPASSAASQ
Sbjct: 1   MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQ 60

Query: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPE 120
           ANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPE
Sbjct: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPE 120

Query: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY 180
           AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY
Sbjct: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY 180

Query: 181 GYGKVPRFRMPTRYGPYY 198
           GYGKVPRFRMPTRYGPYY
Sbjct: 181 GYGKVPRFRMPTRYGPYY 198

[Close]
BLAST of CmaCh04G004050 vs. ExPASy TrEMBL
Match: A0A6J1CGQ3 (polyadenylate-binding protein 2-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011513 PE=4 SV=1)

HSP 1 Score: 355.9 bits (912), Expect = 1.1e-94
Identity = 183/198 (92.42%), Postives = 190/198 (95.96%), Query Frame = 0 

Query: 1   MEHEDFDMIGSDLND-TELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQ 60
           MEHED DMIGS+ ND  ELDDM KRLKEME+EAAALREMQAKVEKEMSS+QDPAS+AASQ
Sbjct: 1   MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60

Query: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPE 120
           ANREEVDARSVFVGNVDYSCTPEEVQQHFQ+CGTVNRITIRTDKFGQPKGYAYVEFLEPE
Sbjct: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLEPE 120

Query: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY 180
           AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRR N FMGA+SRSPYV APYFF+PY
Sbjct: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYV-APYFFSPY 180

Query: 181 GYGKVPRFRMPTRYGPYY 198
           GYGKVPRFRMPTRYGPYY
Sbjct: 181 GYGKVPRFRMPTRYGPYY 197

[Close]
BLAST of CmaCh04G004050 vs. ExPASy TrEMBL
Match: A0A5A7V2R3 (Polyadenylate-binding protein 2-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold652G00160 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 7.0e-94
Identity = 180/198 (90.91%), Postives = 190/198 (95.96%), Query Frame = 0 

Query: 1   MEHEDFDMIGSDLND-TELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQ 60
           MEH+D DMIGSD ND  ELDDM KRLK+ME+EAAALREMQAKVEKEMSS+QDPAS+AASQ
Sbjct: 1   MEHDDIDMIGSDTNDAVELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60

Query: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPE 120
           ANREEVD+RSVFVGNVDYSCTPEEVQQHFQ+CGTVNRITIRTDKFGQPKGYAYVEF+EPE
Sbjct: 61  ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPE 120

Query: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY 180
           AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRR N FMGA+SRSPYV APYFF+PY
Sbjct: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYV-APYFFSPY 180

Query: 181 GYGKVPRFRMPTRYGPYY 198
           GYGKVPRFRMPTRYGPYY
Sbjct: 181 GYGKVPRFRMPTRYGPYY 197

[Close]
BLAST of CmaCh04G004050 vs. ExPASy TrEMBL
Match: A0A1S3CHX7 (polyadenylate-binding protein 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501153 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 7.0e-94
Identity = 180/198 (90.91%), Postives = 190/198 (95.96%), Query Frame = 0 

Query: 1   MEHEDFDMIGSDLND-TELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQ 60
           MEH+D DMIGSD ND  ELDDM KRLK+ME+EAAALREMQAKVEKEMSS+QDPAS+AASQ
Sbjct: 1   MEHDDIDMIGSDTNDAVELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60

Query: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPE 120
           ANREEVD+RSVFVGNVDYSCTPEEVQQHFQ+CGTVNRITIRTDKFGQPKGYAYVEF+EPE
Sbjct: 61  ANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPE 120

Query: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY 180
           AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRR N FMGA+SRSPYV APYFF+PY
Sbjct: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYV-APYFFSPY 180

Query: 181 GYGKVPRFRMPTRYGPYY 198
           GYGKVPRFRMPTRYGPYY
Sbjct: 181 GYGKVPRFRMPTRYGPYY 197

[Close]
BLAST of CmaCh04G004050 vs. NCBI nr
Match: XP_022988970.1 (polyadenylate-binding protein 2-like [Cucurbita maxima])

HSP 1 Score: 386.0 bits (990), Expect = 2.0e-103
Identity = 197/198 (99.49%), Postives = 197/198 (99.49%), Query Frame = 0 

Query: 1   MEHEDFDMIGSDLNDT-ELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQ 60
           MEHEDFDMIGSDLNDT ELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQ
Sbjct: 1   MEHEDFDMIGSDLNDTVELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQ 60

Query: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPE 120
           ANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPE
Sbjct: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPE 120

Query: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY 180
           AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY
Sbjct: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY 180

Query: 181 GYGKVPRFRMPTRYGPYY 198
           GYGKVPRFRMPTRYGPYY
Sbjct: 181 GYGKVPRFRMPTRYGPYY 198

[Close]
BLAST of CmaCh04G004050 vs. NCBI nr
Match: XP_022943012.1 (polyadenylate-binding protein 2-like [Cucurbita moschata] >KAG6600247.1 Polyadenylate-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030904.1 Polyadenylate-binding protein 3 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 384.0 bits (985), Expect = 7.6e-103
Identity = 196/198 (98.99%), Postives = 197/198 (99.49%), Query Frame = 0 

Query: 1   MEHEDFDMIGSDLNDT-ELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQ 60
           MEHEDFDMIGSDLNDT ELDDMTKRLKEME+EAAALREMQAKVEKEMSSLQDPASSAASQ
Sbjct: 1   MEHEDFDMIGSDLNDTAELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQ 60

Query: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPE 120
           ANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPE
Sbjct: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPE 120

Query: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY 180
           AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY
Sbjct: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY 180

Query: 181 GYGKVPRFRMPTRYGPYY 198
           GYGKVPRFRMPTRYGPYY
Sbjct: 181 GYGKVPRFRMPTRYGPYY 198

[Close]
BLAST of CmaCh04G004050 vs. NCBI nr
Match: XP_023541205.1 (polyadenylate-binding protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384.0 bits (985), Expect = 7.6e-103
Identity = 196/198 (98.99%), Postives = 197/198 (99.49%), Query Frame = 0 

Query: 1   MEHEDFDMIGSDLNDT-ELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQ 60
           MEHEDFDMIGSDLNDT ELDDMTKRLKEME+EAAALREMQAKVEKEMSSLQDPASSAASQ
Sbjct: 1   MEHEDFDMIGSDLNDTVELDDMTKRLKEMESEAAALREMQAKVEKEMSSLQDPASSAASQ 60

Query: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPE 120
           ANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPE
Sbjct: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPE 120

Query: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY 180
           AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY
Sbjct: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY 180

Query: 181 GYGKVPRFRMPTRYGPYY 198
           GYGKVPRFRMPTRYGPYY
Sbjct: 181 GYGKVPRFRMPTRYGPYY 198

[Close]
BLAST of CmaCh04G004050 vs. NCBI nr
Match: XP_004137160.1 (polyadenylate-binding protein 2 isoform X4 [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 7.6e-95
Identity = 180/197 (91.37%), Postives = 190/197 (96.45%), Query Frame = 0 

Query: 1   MEHEDFDMIGSDLNDTELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQA 60
           MEH+D DMIGSD ND ELDDM KRLK+ME+EAAALREMQAKVEKEMSS+QDPAS+AASQA
Sbjct: 1   MEHDDVDMIGSDANDAELDDMKKRLKDMEDEAAALREMQAKVEKEMSSVQDPASAAASQA 60

Query: 61  NREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPEA 120
           NREEVD+RSVFVGNVDYSCTPEEVQQHFQ+CGTVNRITIRTDKFGQPKGYAYVEF+EPEA
Sbjct: 61  NREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFVEPEA 120

Query: 121 VQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYG 180
           VQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRR N FMGA+SRSPYV APYFF+PYG
Sbjct: 121 VQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYV-APYFFSPYG 180

Query: 181 YGKVPRFRMPTRYGPYY 198
           YGKVPRFRMPTRYGPYY
Sbjct: 181 YGKVPRFRMPTRYGPYY 196

[Close]
BLAST of CmaCh04G004050 vs. NCBI nr
Match: XP_022140995.1 (polyadenylate-binding protein 2-like isoform X1 [Momordica charantia])

HSP 1 Score: 355.9 bits (912), Expect = 2.2e-94
Identity = 183/198 (92.42%), Postives = 190/198 (95.96%), Query Frame = 0 

Query: 1   MEHEDFDMIGSDLND-TELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQ 60
           MEHED DMIGS+ ND  ELDDM KRLKEME+EAAALREMQAKVEKEMSS+QDPAS+AASQ
Sbjct: 1   MEHEDIDMIGSESNDAVELDDMKKRLKEMEDEAAALREMQAKVEKEMSSVQDPASAAASQ 60

Query: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPE 120
           ANREEVDARSVFVGNVDYSCTPEEVQQHFQ+CGTVNRITIRTDKFGQPKGYAYVEFLEPE
Sbjct: 61  ANREEVDARSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLEPE 120

Query: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPY 180
           AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRR N FMGA+SRSPYV APYFF+PY
Sbjct: 121 AVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRSNPFMGARSRSPYV-APYFFSPY 180

Query: 181 GYGKVPRFRMPTRYGPYY 198
           GYGKVPRFRMPTRYGPYY
Sbjct: 181 GYGKVPRFRMPTRYGPYY 197

[Close]
BLAST of CmaCh04G004050 vs. TAIR 10
Match: AT5G65260.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 270.8 bits (691), Expect = 8.8e-73
Identity = 142/193 (73.58%), Postives = 164/193 (84.97%), Query Frame = 0 

Query: 5   DFDMIGSDLNDT-ELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQANRE 64
           D DM  +D +   ELD+M KRLKEME+EAAALREMQAKVEKEM + QDPAS AA+QA +E
Sbjct: 29  DLDMAAADDDAVKELDEMKKRLKEMEDEAAALREMQAKVEKEMGA-QDPASIAANQAGKE 88

Query: 65  EVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPEAVQE 124
           EVDARSVFVGNVDY+CTPEEVQQHFQTCGTV+R+TI TDKFGQPKG+AYVEF+E EAVQE
Sbjct: 89  EVDARSVFVGNVDYACTPEEVQQHFQTCGTVHRVTILTDKFGQPKGFAYVEFVEVEAVQE 148

Query: 125 ALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGK 184
           AL LNESELHGRQLKV  KRTN+PG+KQ+R RR N +MG + R P++ +PY ++PYGYGK
Sbjct: 149 ALQLNESELHGRQLKVLQKRTNVPGLKQFRGRRFNPYMGYRFRRPFM-SPYMYSPYGYGK 208

Query: 185 VPRFRMPTRYGPY 197
            PRFR P RY PY
Sbjct: 209 APRFRRPMRYMPY 219

[Close]
BLAST of CmaCh04G004050 vs. TAIR 10
Match: AT5G10350.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 269.6 bits (688), Expect = 1.9e-72
Identity = 141/193 (73.06%), Postives = 159/193 (82.38%), Query Frame = 0 

Query: 5   DFDMIGSDLND-TELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQANRE 64
           D DM  +D +  TEL +M +RLKEME EAAALREMQAKVEKEM + QDPAS AA+Q  +E
Sbjct: 25  DIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQAKVEKEMGATQDPASMAANQEGKE 84

Query: 65  EVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPEAVQE 124
           EVDARSV+VGNVDY+CTPEEVQ HFQTCGTVNR+TI  DKFGQPKG+AYVEF+E EAVQE
Sbjct: 85  EVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQE 144

Query: 125 ALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYGK 184
           AL LNESELHGRQLKV+ KRTN+PGMKQY P R N  MG + R P+V  PYF++PYGYGK
Sbjct: 145 ALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNPSMGYRFRRPFV-PPYFYSPYGYGK 204

Query: 185 VPRFRMPTRYGPY 197
            PRFR P RY PY
Sbjct: 205 APRFRRPMRYMPY 216

[Close]
BLAST of CmaCh04G004050 vs. TAIR 10
Match: AT5G10350.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 248.8 bits (634), Expect = 3.6e-66
Identity = 131/179 (73.18%), Postives = 149/179 (83.24%), Query Frame = 0 

Query: 5   DFDMIGSDLND-TELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQANRE 64
           D DM  +D +  TEL +M +RLKEME EAAALREMQAKVEKEM + QDPAS AA+Q  +E
Sbjct: 25  DIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQAKVEKEMGATQDPASMAANQEGKE 84

Query: 65  EVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPEAVQE 124
           EVDARSV+VGNVDY+CTPEEVQ HFQTCGTVNR+TI  DKFGQPKG+AYVEF+E EAVQE
Sbjct: 85  EVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKGFAYVEFVEVEAVQE 144

Query: 125 ALLLNESELHGRQLKVTAKRTNIPGMKQYRPRRPNSFMGAQSRSPYVAAPYFFAPYGYG 183
           AL LNESELHGRQLKV+ KRTN+PGMKQY P R N  MG + R P+V  PYF++PYGYG
Sbjct: 145 ALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNPSMGYRFRRPFV-PPYFYSPYGYG 202

[Close]
BLAST of CmaCh04G004050 vs. TAIR 10
Match: AT5G51120.1 (polyadenylate-binding protein 1 )

HSP 1 Score: 233.0 bits (593), Expect = 2.0e-61
Identity = 121/181 (66.85%), Postives = 146/181 (80.66%), Query Frame = 0 

Query: 17  ELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQDPASSAASQANREEVDARSVFVGNVD 76
           +L+DM KR+KE+E EA ALREMQAK EK+M + QDP S   S A +EEVD+RS++VGNVD
Sbjct: 53  DLEDMKKRIKEIEEEAGALREMQAKAEKDMGASQDP-SGGVSAAEKEEVDSRSIYVGNVD 112

Query: 77  YSCTPEEVQQHFQTCGTVNRITIRTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQ 136
           Y+CTPEEVQQHFQ+CGTVNR+TI TDKFGQPKG+AYVEF+E EAVQ +L+LNESELHGRQ
Sbjct: 113 YACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQ 172

Query: 137 LKVTAKRTNIPGMKQYRPR-RPNSFMGAQSRSPYVAAPYFFAPYGYGKVPRFRMPTRYGP 196
           +KV+AKRTN+PGM+Q+R R RP  F   +   P V    F+ PY YG+VPRFR P RY P
Sbjct: 173 IKVSAKRTNVPGMRQFRGRGRP--FRPMRGFMPGVP---FYPPYAYGRVPRFRRPMRYRP 227

[Close]
BLAST of CmaCh04G004050 vs. TAIR 10
Match: AT5G51120.2 (polyadenylate-binding protein 1 )

HSP 1 Score: 213.4 bits (542), Expect = 1.7e-55
Identity = 119/218 (54.59%), Postives = 146/218 (66.97%), Query Frame = 0 

Query: 17  ELDDMTKRLKEMENEAAALREMQAKVEKEMSSLQ-------------------------- 76
           +L+DM KR+KE+E EA ALREMQAK EK+M + Q                          
Sbjct: 53  DLEDMKKRIKEIEEEAGALREMQAKAEKDMGASQGLKLVLLIMILLWVYILESFSESMNL 112

Query: 77  -----------DPASSAASQANREEVDARSVFVGNVDYSCTPEEVQQHFQTCGTVNRITI 136
                      +  +S  S A +EEVD+RS++VGNVDY+CTPEEVQQHFQ+CGTVNR+TI
Sbjct: 113 SRNLLEFEYEKEIINSGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTI 172

Query: 137 RTDKFGQPKGYAYVEFLEPEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRPR-RPN 196
            TDKFGQPKG+AYVEF+E EAVQ +L+LNESELHGRQ+KV+AKRTN+PGM+Q+R R RP 
Sbjct: 173 LTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRGRGRP- 232

The following BLAST results are available for this feature:
BLAST of CmaCh04G004050 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FJN91.2e-7173.58Polyadenylate-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=PABN2 PE=1 SV... [more]
Q9LX902.7e-7173.06Polyadenylate-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=PABN3 PE=1 SV... [more]
Q93VI42.8e-6066.85Polyadenylate-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=PABN1 PE=1 SV... [more]
O143271.2e-3450.00Polyadenylate-binding protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC ... [more]
Q9DDY96.8e-3042.49Polyadenylate-binding protein 2-A OS=Xenopus laevis OX=8355 GN=pabpn1-a PE=2 SV=... [more]
BLAST of CmaCh04G004050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JL289.7e-10499.49polyadenylate-binding protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111486168... [more]
A0A6J1FRU13.7e-10398.99polyadenylate-binding protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC1114478... [more]
A0A6J1CGQ31.1e-9492.42polyadenylate-binding protein 2-like isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A5A7V2R37.0e-9490.91Polyadenylate-binding protein 2-like isoform X2 OS=Cucumis melo var. makuwa OX=1... [more]
A0A1S3CHX77.0e-9490.91polyadenylate-binding protein 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
BLAST of CmaCh04G004050 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022988970.12.0e-10399.49polyadenylate-binding protein 2-like [Cucurbita maxima][more]
XP_022943012.17.6e-10398.99polyadenylate-binding protein 2-like [Cucurbita moschata] >KAG6600247.1 Polyaden... [more]
XP_023541205.17.6e-10398.99polyadenylate-binding protein 2-like [Cucurbita pepo subsp. pepo][more]
XP_004137160.17.6e-9591.37polyadenylate-binding protein 2 isoform X4 [Cucumis sativus][more]
XP_022140995.12.2e-9492.42polyadenylate-binding protein 2-like isoform X1 [Momordica charantia][more]
BLAST of CmaCh04G004050 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G65260.18.8e-7373.58RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G10350.11.9e-7273.06RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G10350.23.6e-6673.18RNA-binding (RRM/RBD/RNP motifs) family protein [more]
AT5G51120.12.0e-6166.85polyadenylate-binding protein 1 [more]
AT5G51120.21.7e-5554.59polyadenylate-binding protein 1 [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 11..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..62
NoneNo IPR availablePANTHERPTHR23236EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4Hcoord: 5..193
NoneNo IPR availablePANTHERPTHR23236:SF79SUBFAMILY NOT NAMEDcoord: 5..193
NoneNo IPR availableCDDcd12306RRM_II_PABPscoord: 69..140
e-value: 1.14604E-48
score: 151.29
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 69..140
e-value: 1.2E-22
score: 91.3
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 70..138
e-value: 3.1E-17
score: 62.2
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 68..144
score: 16.909462
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 11..141
e-value: 2.1E-28
score: 101.1
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 59..165

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G004050.1CmaCh04G004050.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding