CmaCh04G003930 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G003930
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	30S ribosomal protein S11
Location	Cma_Chr04: 1993856 .. 1996562 (+)
RNA-Seq Expression	CmaCh04G003930
Synteny	CmaCh04G003930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAAAAGAGCACTATAATTGGGCCGGCAAGTAAATTAGGGTTTTTTTTCGTTCGACATTCGTATTCCCGGAACTTCTGCTGCGGCCGATCGACGACGATGCGGAGACTTCCCCTCCCTCACCTCTCTTCTCTCTTCCGTTCCTCCTCTCTCTCTCATGGCTCTTCCTTCTCTTCTTCTCGCGTCTCCATTTCTCCATTTTTTGGCACTGATGGTCGATCTCCCATGTTCTCTCTCCACTCTTCTCACGGATCGGATCTCTCTGGATCCGTTCAACTAGACAGGCAGGATTCAGGTGAATTTTATTTTTTACTTGCTATCTGATTCGGGAAATGACGATTATCGGTATTTATAATTTATGTTCTAAATGGGGTTTGGCGTTTTAGGTATAGGAAAGGTTTGTTTAGTGACTAAGATCTTTCTTTCTGGATCTATTGATTTTAACGATTCAATGCATTTGCTTTTCACTAAAGAGAGATAAAGTTAAGGATGTCATTTTCTGGCGGAGTGAATTTTTCGAGTGTTTTCTTTTGCGGATCGCAGGCTGTGTGGACCTTCCACGTGGTGATTCTGTGAATGTTGGACGGGAGATTGTAGGACGTGCTTGGAAAGCCTTGGGAGCTCAAGGGCCTTGTTGGGGTTTGGCGCGTTCGAGTGAAAATGTCTCTGTTCCTTATTCTTCTAGCTCTAGATGTTATGTACACTACGATGGCCCGCCGAATGCTGATACAGGAAGGAACTTTAAGTCCATGAACTTCGTCAGGGGAATTTTAGAGGAAGATGGAATGAATTTTATGGGTAGTTCTCAGTTTCCTAGACCACCCAATATGGAGCACAATGCTGATATTGTCCATGTAAAGCTGATGCGTAACAATACATTTATCACTGTTACGGATAACAAAGGAAACACAAAGCTTAAAGCCTCTGCTGGCCGTCTTGAAGAACTGAAAGGAGGGCCTAAACTGTCCCGTTATGCTGCCGAAGCAACTGCAGAGTATGTTGGTCGTGAATCTAGAAAATTGGGGTTGAAATCAGTTGTGATGAGGGTGAAAGGCTTTACTTACTTTAAGAAGAAAAAACAAGCGATCTTGAGTTGGAGAGATGGTTTTACAGATTCTAGAAGTGATCAAAATCCAATTGTTTACATTGAAGATACTACAAGACGTGCTCACAATGGTTGCAGACTTCCAAAGCAACGCCGTGTCTAGGTGTATGGGACTGGAATCTTGATGATGATGTCTTTTTTTCTTTGTTGGAAAGTTTTCCTGGTTCAAATCGATGTAGCTCGCCTTCAAGTTCTTACTTGCCTTTTGCAATAATGATGACAATTGGATGTTTCTTTATATATACATCAGTGTAAAATTTTACTGGTTTAAATTGATGTAGGTTGCCTTCAAGTGTTCACTTACTGCAGTAACGATGACGACGACGGGATGTTTTTATATACACCAACATCAAATAAGTGTTTTCCTTTTATTCAAGTTCAACAACACGTGAGATTGAAAGATTCGAAACAGCCTCTTGATATATGCCTTATCTGTTTGGACTTCATTTGAGATATGCAATACCAACTTTTTCCTTGCAGTTGTGCACCACAAAAAATTCTTGTGGCCAGTGTCCAATCTTTTTACGTGGCTATAGTTTCTTCTTTCCTGTTGTGGATTATACATTTCTCTGATCTTACTTCTATCTCTTGACTCATAGCCTGGAATGCTTGTTTTACCTTTAGCATGAAAGATATTGGTCTCTAATTGTGACCAGATTGCGCCAACCTCATGAAAAGACAAGGGAAAGTAGCTGGTTTGACTACAGGACAGAGAGAGCTATTACAGTGATTTGATTAACATTCTTGCGTGCTGAATTTTTTATGAAAATTTGCAGGCTCTTTTATCATTGATGGTGGATTTATACTATGTATCTGGTCCCTCAGCATGGATGAGCCATGGGCATAGCATGGAGTTTGCTAACAGAGAGCTATTTATGAACCAGAAAGTCTCAATACATAGTTCGTAGATGAAGGCGTTCCATATAGTTCTGAATAGAAGGATTGAGCAAAAATTAACATGCTATCTACAGGTTGTTTCTTAGTATGATGGCTCAGTTCAGGTTACTGCTGCGCCCATAGTTGCCTACTGAACCTTTTCAGCTGTGTTATGTTCAGATTGTCTCTTCCATAATAGTTTACGGCATACACGAACTGGGCTTCTGGATTCGAGTAACTGAAATTGAAAATATTCTTTTCTACTTGGTAGTGAACATGTTGAAAGTAAGTTCTGTTTCATTCAACTGGGTCAGAGGGATACCCTCATTTAATGGGGATTTTTTGAAATCTAGGCACAAAAAACTGAATAGAAATTCAACTATCAGCTCGATTTTGCATTATCATGAAAAGGGGAAAGAGTAAGGAGGGGAAATAAATAAGCTACAGTAAAGAAAACAAACTACAAGACTGAATCATTGATGCATCTAAAGGTTGGATGGAAGCCAAACTAATCCGAAGATGTCTTTTTAAGTTGTCATAGATCTACAGCGAGGGATAGCATCAACGGAATTCACGAAATTTCAAATATCTCAGGCGTGCACACGAATGAACGAACTACAGAGGCAACAACCTCGAAAAGCCTTCCGAGTAGGGTGTAACAGAGCTTCCTCTGAATCCAGATGGCCATAGAAAATCAACTGTATGTTGCATTGCAGTGCACCGGAG

mRNA sequence

CAAAAAAAGAGCACTATAATTGGGCCGGCAAGTAAATTAGGGTTTTTTTTCGTTCGACATTCGTATTCCCGGAACTTCTGCTGCGGCCGATCGACGACGATGCGGAGACTTCCCCTCCCTCACCTCTCTTCTCTCTTCCGTTCCTCCTCTCTCTCTCATGGCTCTTCCTTCTCTTCTTCTCGCGTCTCCATTTCTCCATTTTTTGGCACTGATGGTCGATCTCCCATGTTCTCTCTCCACTCTTCTCACGGATCGGATCTCTCTGGATCCGTTCAACTAGACAGGCAGGATTCAGGCTGTGTGGACCTTCCACGTGGTGATTCTGTGAATGTTGGACGGGAGATTGTAGGACGTGCTTGGAAAGCCTTGGGAGCTCAAGGGCCTTGTTGGGGTTTGGCGCGTTCGAGTGAAAATGTCTCTGTTCCTTATTCTTCTAGCTCTAGATGTTATGTACACTACGATGGCCCGCCGAATGCTGATACAGGAAGGAACTTTAAGTCCATGAACTTCGTCAGGGGAATTTTAGAGGAAGATGGAATGAATTTTATGGGTAGTTCTCAGTTTCCTAGACCACCCAATATGGAGCACAATGCTGATATTGTCCATGTAAAGCTGATGCGTAACAATACATTTATCACTGTTACGGATAACAAAGGAAACACAAAGCTTAAAGCCTCTGCTGGCCGTCTTGAAGAACTGAAAGGAGGGCCTAAACTGTCCCGTTATGCTGCCGAAGCAACTGCAGAGTATGTTGGTCGTGAATCTAGAAAATTGGGGTTGAAATCAGTTGTGATGAGGGTGAAAGGCTTTACTTACTTTAAGAAGAAAAAACAAGCGATCTTGAGTTGGAGAGATGGTTTTACAGATTCTAGAAGTGATCAAAATCCAATTGTTTACATTGAAGATACTACAAGACGTGCTCACAATGGTTGCAGACTTCCAAAGCAACGCCGTGTCTAGGTGTTGCCTTCAAGTGTTCACTTACTGCAGTAACGATGACGACGACGGGATGTTTTTATATACACCAACATCAAATAAGTGTTTTCCTTTTATTCAAGTTCAACAACACGTGAGATTGAAAGATTCGAAACAGCCTCTTGATATATGCCTTATCTGTTTGGACTTCATTTGAGATATGCAATACCAACTTTTTCCTTGCAGTTGTGCACCACAAAAAATTCTTGTGGCCAGTGTCCAATCTTTTTACGTGGCTATAGTTTCTTCTTTCCTGTTGTGGATTATACATTTCTCTGATCTTACTTCTATCTCTTGACTCATAGCCTGGAATGCTTGTTTTACCTTTAGCATGAAAGATATTGGTCTCTAATTGTGACCAGATTGCGCCAACCTCATGAAAAGACAAGGGAAAGTAGCTGGTTTGACTACAGGACAGAGAGAGCTATTACAGTGATTTGATTAACATTCTTGCGTGCTGAATTTTTTATGAAAATTTGCAGGCTCTTTTATCATTGATGGTGGATTTATACTATGTATCTGGTCCCTCAGCATGGATGAGCCATGGGCATAGCATGGAGTTTGCTAACAGAGAGCTATTTATGAACCAGAAAGTCTCAATACATAGTTCGTAGATGAAGGCGTTCCATATAGTTCTGAATAGAAGGATTGAGCAAAAATTAACATGCTATCTACAGGTTGTTTCTTAGTATGATGGCTCAGTTCAGGTTACTGCTGCGCCCATAGTTGCCTACTGAACCTTTTCAGCTGTGTTATGTTCAGATTGTCTCTTCCATAATAGTTTACGGCATACACGAACTGGGCTTCTGGATTCGAGTAACTGAAATTGAAAATATTCTTTTCTACTTGGTAGTGAACATGTTGAAAGTAAGTTCTGTTTCATTCAACTGGGTCAGAGGGATACCCTCATTTAATGGGGATTTTTTGAAATCTAGGCACAAAAAACTGAATAGAAATTCAACTATCAGCTCGATTTTGCATTATCATGAAAAGGGGAAAGAGTAAGGAGGGGAAATAAATAAGCTACAGTAAAGAAAACAAACTACAAGACTGAATCATTGATGCATCTAAAGGTTGGATGGAAGCCAAACTAATCCGAAGATGTCTTTTTAAGTTGTCATAGATCTACAGCGAGGGATAGCATCAACGGAATTCACGAAATTTCAAATATCTCAGGCGTGCACACGAATGAACGAACTACAGAGGCAACAACCTCGAAAAGCCTTCCGAGTAGGGTGTAACAGAGCTTCCTCTGAATCCAGATGGCCATAGAAAATCAACTGTATGTTGCATTGCAGTGCACCGGAG

Coding sequence (CDS)

ATGCGGAGACTTCCCCTCCCTCACCTCTCTTCTCTCTTCCGTTCCTCCTCTCTCTCTCATGGCTCTTCCTTCTCTTCTTCTCGCGTCTCCATTTCTCCATTTTTTGGCACTGATGGTCGATCTCCCATGTTCTCTCTCCACTCTTCTCACGGATCGGATCTCTCTGGATCCGTTCAACTAGACAGGCAGGATTCAGGCTGTGTGGACCTTCCACGTGGTGATTCTGTGAATGTTGGACGGGAGATTGTAGGACGTGCTTGGAAAGCCTTGGGAGCTCAAGGGCCTTGTTGGGGTTTGGCGCGTTCGAGTGAAAATGTCTCTGTTCCTTATTCTTCTAGCTCTAGATGTTATGTACACTACGATGGCCCGCCGAATGCTGATACAGGAAGGAACTTTAAGTCCATGAACTTCGTCAGGGGAATTTTAGAGGAAGATGGAATGAATTTTATGGGTAGTTCTCAGTTTCCTAGACCACCCAATATGGAGCACAATGCTGATATTGTCCATGTAAAGCTGATGCGTAACAATACATTTATCACTGTTACGGATAACAAAGGAAACACAAAGCTTAAAGCCTCTGCTGGCCGTCTTGAAGAACTGAAAGGAGGGCCTAAACTGTCCCGTTATGCTGCCGAAGCAACTGCAGAGTATGTTGGTCGTGAATCTAGAAAATTGGGGTTGAAATCAGTTGTGATGAGGGTGAAAGGCTTTACTTACTTTAAGAAGAAAAAACAAGCGATCTTGAGTTGGAGAGATGGTTTTACAGATTCTAGAAGTGATCAAAATCCAATTGTTTACATTGAAGATACTACAAGACGTGCTCACAATGGTTGCAGACTTCCAAAGCAACGCCGTGTCTAG

Protein sequence

MRRLPLPHLSSLFRSSSLSHGSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQLDRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHYDGPPNADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV

Homology

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BLAST of CmaCh04G003930 vs. ExPASy Swiss-Prot
Match: Q8VZT8 (Probable ribosomal protein S11, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD3 PE=1 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 7.1e-52
Identity = 95/162 (58.64%), Postives = 132/162 (81.48%), Query Frame = 0


Query: 125 NADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDN 184
           N+ +G     ++FVR ++E++G    G     + PN+E NADI+H+K++RNNTF+TVTD+
Sbjct: 153 NSRSGGKSSDLDFVREVIEDEGRRTAGIFSHFQRPNLETNADIIHIKMLRNNTFVTVTDS 212

Query: 185 KGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTYFKKKK 244
           KGN K KA++G L +LKGG K++ Y A+ATAE +GR ++ +GLKSVV++V GFT+F KKK
Sbjct: 213 KGNVKCKATSGSLPDLKGGRKMTNYTADATAENIGRRAKAMGLKSVVVKVNGFTHFGKKK 272

Query: 245 QAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 287
           +AI+++RDGFT+SRSDQNPIVYIEDTTR+AHNGCRLP++RRV
Sbjct: 273 KAIIAFRDGFTNSRSDQNPIVYIEDTTRKAHNGCRLPRKRRV 314

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BLAST of CmaCh04G003930 vs. ExPASy Swiss-Prot
Match: P26870 (Ribosomal protein S11, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS11 PE=3 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 1.2e-11
Identity = 49/127 (38.58%), Postives = 67/127 (52.76%), Query Frame = 0


Query: 160 NMEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVG 219
           NM+    I +++    NT IT+TD  GNTK  +S+G +   KG  + + YAA+ATAE   
Sbjct: 9   NMQKKHCITYIQSTFGNTIITLTDYNGNTKTWSSSGSV-GFKGSRRSTNYAAQATAENAA 68

Query: 220 RESRKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCR 279
           R + +LG K V +R+KG  Y K+     L         +     I  I D T   HNGCR
Sbjct: 69  RVAIQLGFKFVEVRIKGLGYGKESSLRGL---------KLGGLIITKIRDVTPTPHNGCR 125

Query: 280 LPKQRRV 287
            PK+RRV
Sbjct: 129 PPKKRRV 125

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BLAST of CmaCh04G003930 vs. ExPASy Swiss-Prot
Match: P46746 (Ribosomal protein S11, mitochondrial OS=Prototheca wickerhamii OX=3111 GN=RPS11 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-11
Identity = 45/126 (35.71%), Postives = 68/126 (53.97%), Query Frame = 0


Query: 161 MEHNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGR 220
           +E  + IVH++   NNT IT+TD +GNT+   SAG L   K   K + YA+ A AE +  
Sbjct: 13  IEKKSGIVHIQSTTNNTLITLTDLEGNTQFFVSAGTL-GFKNSRKSTVYASGAAAEALAS 72

Query: 221 ESRKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRL 280
           ++   G +++++++KG  Y KK               +     I  I++ T  AHNGCR 
Sbjct: 73  KAFNEGYRTIIVKIKGLGYGKK---------SAIRGLQKSNLVIKQIQEVTPIAHNGCRP 128

Query: 281 PKQRRV 287
           PK+RRV
Sbjct: 133 PKKRRV 128

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BLAST of CmaCh04G003930 vs. ExPASy Swiss-Prot
Match: A8ETK4 (30S ribosomal protein S11 OS=Arcobacter butzleri (strain RM4018) OX=367737 GN=rpsK PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.8e-10
Identity = 43/120 (35.83%), Postives = 65/120 (54.17%), Query Frame = 0


Query: 167 IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLG 226
           IVH+    NNT +TVTDN GN    +SAG L   KG  K + +AA+A  E    ++ + G
Sbjct: 20  IVHIAASFNNTMVTVTDNAGNAIAWSSAGNL-GFKGSKKSTPFAAQAAVEDAMNKAMEHG 79

Query: 227 LKSVVMRVKGFTYFKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 286
           +K+V ++++G    +      +   DG          + +++D T  AHNGCR PK+RRV
Sbjct: 80  IKNVGIKIQGPGSGRDTAVKAVGSMDGVR--------VTWLKDVTPLAHNGCRPPKRRRV 130

[Close]

BLAST of CmaCh04G003930 vs. ExPASy Swiss-Prot
Match: B3QYE8 (30S ribosomal protein S11 OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) OX=517418 GN=rpsK PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.3e-10
Identity = 49/123 (39.84%), Postives = 66/123 (53.66%), Query Frame = 0


Query: 167 IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLG 226
           IVH+K   NN  +T+TD  GNT   ++AG+    KG  K + YA++ TAE   +E+  LG
Sbjct: 19  IVHIKATFNNIAVTITDVTGNTVSWSTAGK-NGFKGSKKNTPYASQVTAESAAKEAYDLG 78

Query: 227 LKSVVMRVKGFTYFKKKKQAILSWRDGFTDSRSDQN---PIVYIEDTTRRAHNGCRLPKQ 286
           ++ V +R+KG            S RD     RS QN    +  I D T   HNGCR PK+
Sbjct: 79  MRKVDVRIKGPG----------SGRDAAI--RSLQNAGLEVKTISDITPLPHNGCRPPKR 128

[Close]

BLAST of CmaCh04G003930 vs. ExPASy TrEMBL
Match: A0A6J1KGF8 (probable ribosomal protein S11, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111493991 PE=3 SV=1)

HSP 1 Score: 573.5 bits (1477), Expect = 4.8e-160
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0


Query: 1   MRRLPLPHLSSLFRSSSLSHGSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQL 60
           MRRLPLPHLSSLFRSSSLSHGSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQL
Sbjct: 1   MRRLPLPHLSSLFRSSSLSHGSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQL 60

Query: 61  DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120
           DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY
Sbjct: 61  DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120

Query: 121 DGPPNADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180
           DGPPNADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT
Sbjct: 121 DGPPNADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180

Query: 181 VTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTYF 240
           VTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTYF
Sbjct: 181 VTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTYF 240

Query: 241 KKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 287
           KKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 KKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of CmaCh04G003930 vs. ExPASy TrEMBL
Match: A0A6J1FTT5 (probable ribosomal protein S11, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111447246 PE=3 SV=1)

HSP 1 Score: 548.1 bits (1411), Expect = 2.1e-152
Identity = 272/286 (95.10%), Postives = 280/286 (97.90%), Query Frame = 0


Query: 1   MRRLPLPHLSSLFRSSSLSHGSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQL 60
           MRRLP PHLSSLFRSSSLSHGSSFSSSR+SISPFFGTD RSPM SLH SHGS++SGSVQL
Sbjct: 1   MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQL 60

Query: 61  DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120
           DRQDSGCV+LPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY
Sbjct: 61  DRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120

Query: 121 DGPPNADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180
           DG PNADTGRNFKSMNFVRGILEEDGM+FMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT
Sbjct: 121 DGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180

Query: 181 VTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTYF 240
           VTDNKGNTKLKAS+GRLEELKGGPKLSRYAAEATAEYVGRES+KLGLKSVVMRVKGFTYF
Sbjct: 181 VTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYF 240

Query: 241 KKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 287
           KKKKQAILSWRDGFTDS+ DQNPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 KKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of CmaCh04G003930 vs. ExPASy TrEMBL
Match: A0A6J1CJJ5 (probable ribosomal protein S11, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111011744 PE=3 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 3.2e-124
Identity = 239/287 (83.28%), Postives = 252/287 (87.80%), Query Frame = 0


Query: 1   MRRLPLPHLSSLFRSSSLSHGSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQL 60
           MRRL L HLSSLFRSSSLSHGSS S  R SIS F G+D RSPM SLH  H SDL+GSVQL
Sbjct: 1   MRRLQLSHLSSLFRSSSLSHGSSSSPFRPSISSFTGSDARSPMASLH-PHRSDLTGSVQL 60

Query: 61  DRQDSGCVDLPRGDSVNVGREI-VGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVH 120
           D Q SGC+DLP+GDS++VGR+I VGRAWKALG  G      RS ENVSVPY+ +S+CYVH
Sbjct: 61  DNQVSGCLDLPQGDSMDVGRQIKVGRAWKALGVMG------RSRENVSVPYAVNSKCYVH 120

Query: 121 YDGPPNADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI 180
           YD   NADTGRNFKSMNFVRGILEEDG +FM  S FPRPPNME NADIVHVKLMRNNTFI
Sbjct: 121 YDSRINADTGRNFKSMNFVRGILEEDGRDFMAGSPFPRPPNMESNADIVHVKLMRNNTFI 180

Query: 181 TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTY 240
           TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEA AEYVGRESRKLGLKSVVMRVKGFTY
Sbjct: 181 TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEAIAEYVGRESRKLGLKSVVMRVKGFTY 240

Query: 241 FKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 287
           FKKK+QAI+SWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 FKKKRQAIMSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 280

[Close]

BLAST of CmaCh04G003930 vs. ExPASy TrEMBL
Match: A0A0A0KVQ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G107470 PE=3 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.7e-107
Identity = 213/287 (74.22%), Postives = 234/287 (81.53%), Query Frame = 0


Query: 1   MRRLPLPHLSSLFRSSSLSHGSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQL 60
           M +L L HLSSLFRSSSLS   SFS SR+SISPF G+D  S M SLH    SDL+GS+Q 
Sbjct: 1   MPKLSLSHLSSLFRSSSLSPAPSFSPSRLSISPFIGSDAPSRMSSLHR---SDLTGSLQP 60

Query: 61  DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120
             Q SGC+     DS NVGREIVGR WK++G QGP  GLAR SE VS+PYS SSRCY  Y
Sbjct: 61  HNQFSGCL----RDSANVGREIVGRGWKSMGVQGPSSGLARPSEGVSIPYSISSRCYGEY 120

Query: 121 DGPPN-ADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI 180
           D  PN  DTGRN K MNFVRGILEE+   F G+ QF RP NMEHNADIVH+KLMRNN+F+
Sbjct: 121 DNRPNPPDTGRNLKPMNFVRGILEEEERGFFGTPQFLRPSNMEHNADIVHIKLMRNNSFV 180

Query: 181 TVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTY 240
           TVTDNKGNTKLKASAGRLE   GG KLSRY+A++ AEYVGRESRKLGLKSVVMRVKGFT+
Sbjct: 181 TVTDNKGNTKLKASAGRLE---GGAKLSRYSADSIAEYVGRESRKLGLKSVVMRVKGFTF 240

Query: 241 FKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 287
           FKKKKQAILSWRDGFTDSR+DQNPIVY+EDTTRRAHNGCRLPK+RRV
Sbjct: 241 FKKKKQAILSWRDGFTDSRTDQNPIVYVEDTTRRAHNGCRLPKKRRV 277

[Close]

BLAST of CmaCh04G003930 vs. ExPASy TrEMBL
Match: A0A5A7TPI6 (Putative ribosomal protein S11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold316G00350 PE=3 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 4.1e-103
Identity = 209/288 (72.57%), Postives = 228/288 (79.17%), Query Frame = 0


Query: 1   MRRLPLPHLSSLFRSSSLSHGSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQL 60
           M +L L HLS LFRSSSLS   SFS SR+SISPF G+D  S   S   SH   L+GS+Q 
Sbjct: 1   MPKLSLSHLSPLFRSSSLSRSPSFSPSRLSISPFIGSDAPSRFSSPLPSH---LTGSLQP 60

Query: 61  DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120
               SG          +VGREIVGR WKA+G QGP WGLARS+E+VSVPYS SSRCY  Y
Sbjct: 61  HNHFSG----------SVGREIVGRGWKAMGVQGPSWGLARSTESVSVPYSISSRCYGEY 120

Query: 121 DGPPN-ADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFI 180
           D  PN  DTGRN K++NFVRGILEED   F    Q+ RP NMEHNADIVH+KLMRNN F+
Sbjct: 121 DNRPNPPDTGRNLKTLNFVRGILEEDEKVFSDVPQYLRPTNMEHNADIVHIKLMRNNAFV 180

Query: 181 TVTDNKGNTKLKASAGRLEELK-GGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFT 240
           TVTDNKGNTKLKASAGRLEELK GG KLSRY+ ++ AEYVGRESRKLGLKSVVMRVKGFT
Sbjct: 181 TVTDNKGNTKLKASAGRLEELKGGGAKLSRYSGDSIAEYVGRESRKLGLKSVVMRVKGFT 240

Query: 241 YFKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 287
           +FKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPK+RRV
Sbjct: 241 FFKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKKRRV 275

[Close]

BLAST of CmaCh04G003930 vs. NCBI nr
Match: XP_022999735.1 (probable ribosomal protein S11, mitochondrial [Cucurbita maxima])

HSP 1 Score: 573.5 bits (1477), Expect = 9.8e-160
Identity = 286/286 (100.00%), Postives = 286/286 (100.00%), Query Frame = 0


Query: 1   MRRLPLPHLSSLFRSSSLSHGSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQL 60
           MRRLPLPHLSSLFRSSSLSHGSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQL
Sbjct: 1   MRRLPLPHLSSLFRSSSLSHGSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQL 60

Query: 61  DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120
           DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY
Sbjct: 61  DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120

Query: 121 DGPPNADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180
           DGPPNADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT
Sbjct: 121 DGPPNADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180

Query: 181 VTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTYF 240
           VTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTYF
Sbjct: 181 VTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTYF 240

Query: 241 KKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 287
           KKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 KKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of CmaCh04G003930 vs. NCBI nr
Match: XP_022942058.1 (probable ribosomal protein S11, mitochondrial [Cucurbita moschata])

HSP 1 Score: 548.1 bits (1411), Expect = 4.4e-152
Identity = 272/286 (95.10%), Postives = 280/286 (97.90%), Query Frame = 0


Query: 1   MRRLPLPHLSSLFRSSSLSHGSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQL 60
           MRRLP PHLSSLFRSSSLSHGSSFSSSR+SISPFFGTD RSPM SLH SHGS++SGSVQL
Sbjct: 1   MRRLPFPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSHGSEISGSVQL 60

Query: 61  DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120
           DRQDSGCV+LPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY
Sbjct: 61  DRQDSGCVNLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120

Query: 121 DGPPNADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180
           DG PNADTGRNFKSMNFVRGILEEDGM+FMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT
Sbjct: 121 DGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180

Query: 181 VTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTYF 240
           VTDNKGNTKLKAS+GRLEELKGGPKLSRYAAEATAEYVGRES+KLGLKSVVMRVKGFTYF
Sbjct: 181 VTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYF 240

Query: 241 KKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 287
           KKKKQAILSWRDGFTDS+ DQNPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 KKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of CmaCh04G003930 vs. NCBI nr
Match: KAG7030891.1 (putative ribosomal protein S11, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 548.1 bits (1411), Expect = 4.4e-152
Identity = 272/286 (95.10%), Postives = 279/286 (97.55%), Query Frame = 0


Query: 1   MRRLPLPHLSSLFRSSSLSHGSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQL 60
           MRRLP PHLSSLFRSSSLSHGSSFSS R+SISPFFGTD RSPM SLH SHGS++SGSVQL
Sbjct: 1   MRRLPFPHLSSLFRSSSLSHGSSFSSCRLSISPFFGTDARSPMSSLHFSHGSEISGSVQL 60

Query: 61  DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120
           DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY
Sbjct: 61  DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120

Query: 121 DGPPNADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180
           DG PNADTGRNFKSMNFVRGILEEDGM+FMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT
Sbjct: 121 DGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180

Query: 181 VTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTYF 240
           VTDNKGNTKLKAS+GRLEELKGGPKLSRYAAEATAEYVGRES+KLGLKSVVMRVKGFTYF
Sbjct: 181 VTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYF 240

Query: 241 KKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 287
           KKKKQAILSWRDGFTDS+ DQNPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 KKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of CmaCh04G003930 vs. NCBI nr
Match: XP_023526167.1 (probable ribosomal protein S11, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 538.1 bits (1385), Expect = 4.6e-149
Identity = 269/286 (94.06%), Postives = 277/286 (96.85%), Query Frame = 0


Query: 1   MRRLPLPHLSSLFRSSSLSHGSSFSSSRVSISPFFGTDGRSPMFSLHSSHGSDLSGSVQL 60
           MRRLPLPHLSSLFRSSSLSHGSSFSSSR+SISPFFGTD RSPM SLH S GS++SGSVQ+
Sbjct: 1   MRRLPLPHLSSLFRSSSLSHGSSFSSSRLSISPFFGTDARSPMSSLHFSRGSEISGSVQI 60

Query: 61  DRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120
           DRQDSGCVDLPRGDSVNVGREIVGRA K LGAQGPCWGLARSSENVSVPYSSSSRCYVHY
Sbjct: 61  DRQDSGCVDLPRGDSVNVGREIVGRAGKGLGAQGPCWGLARSSENVSVPYSSSSRCYVHY 120

Query: 121 DGPPNADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180
           DG PNADTGRNFKSMNFVRGILEED M+FMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT
Sbjct: 121 DGRPNADTGRNFKSMNFVRGILEEDRMDFMGSSQFPRPPNMEHNADIVHVKLMRNNTFIT 180

Query: 181 VTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTYF 240
           VTDNKGNTKLKAS+GRLEELKGGPKLSRYAAEATAEYVGRES+KLGLKSVVMRVKGFTYF
Sbjct: 181 VTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRESKKLGLKSVVMRVKGFTYF 240

Query: 241 KKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 287
           KKKKQAILSWRDGFTDS+ DQNPIVYIEDTTRRAHNGCRLPKQRRV
Sbjct: 241 KKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPKQRRV 286

[Close]

BLAST of CmaCh04G003930 vs. NCBI nr
Match: KAG6600233.1 (putative ribosomal protein S11, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 478.8 bits (1231), Expect = 3.3e-131
Identity = 234/244 (95.90%), Postives = 240/244 (98.36%), Query Frame = 0


Query: 43  MFSLHSSHGSDLSGSVQLDRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARS 102
           M SLH SHGS++SGSVQLDRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARS
Sbjct: 1   MSSLHFSHGSEISGSVQLDRQDSGCVDLPRGDSVNVGREIVGRAWKALGAQGPCWGLARS 60

Query: 103 SENVSVPYSSSSRCYVHYDGPPNADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNME 162
           SENVSVPYSSSSRCYVHYDG PNADTGRNFKSMNFVRGILEEDGM+FMGSSQFPRPPNME
Sbjct: 61  SENVSVPYSSSSRCYVHYDGRPNADTGRNFKSMNFVRGILEEDGMDFMGSSQFPRPPNME 120

Query: 163 HNADIVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRES 222
           HNADIVHVKLMRNNTFITVTDNKGNTKLKAS+GRLEELKGGPKLSRYAAEATAEYVGRES
Sbjct: 121 HNADIVHVKLMRNNTFITVTDNKGNTKLKASSGRLEELKGGPKLSRYAAEATAEYVGRES 180

Query: 223 RKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPK 282
           +KLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDS+ DQNPIVYIEDTTRRAHNGCRLPK
Sbjct: 181 KKLGLKSVVMRVKGFTYFKKKKQAILSWRDGFTDSKRDQNPIVYIEDTTRRAHNGCRLPK 240

Query: 283 QRRV 287
           QRRV
Sbjct: 241 QRRV 244

[Close]

BLAST of CmaCh04G003930 vs. TAIR 10
Match: AT1G31817.1 (Ribosomal L18p/L5e family protein )

HSP 1 Score: 205.7 bits (522), Expect = 5.0e-53
Identity = 95/162 (58.64%), Postives = 132/162 (81.48%), Query Frame = 0


Query: 125 NADTGRNFKSMNFVRGILEEDGMNFMGSSQFPRPPNMEHNADIVHVKLMRNNTFITVTDN 184
           N+ +G     ++FVR ++E++G    G     + PN+E NADI+H+K++RNNTF+TVTD+
Sbjct: 153 NSRSGGKSSDLDFVREVIEDEGRRTAGIFSHFQRPNLETNADIIHIKMLRNNTFVTVTDS 212

Query: 185 KGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLGLKSVVMRVKGFTYFKKKK 244
           KGN K KA++G L +LKGG K++ Y A+ATAE +GR ++ +GLKSVV++V GFT+F KKK
Sbjct: 213 KGNVKCKATSGSLPDLKGGRKMTNYTADATAENIGRRAKAMGLKSVVVKVNGFTHFGKKK 272

Query: 245 QAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 287
           +AI+++RDGFT+SRSDQNPIVYIEDTTR+AHNGCRLP++RRV
Sbjct: 273 KAIIAFRDGFTNSRSDQNPIVYIEDTTRKAHNGCRLPRKRRV 314

[Close]

BLAST of CmaCh04G003930 vs. TAIR 10
Match: ATCG00750.1 (ribosomal protein S11 )

HSP 1 Score: 47.4 bits (111), Expect = 2.3e-05
Identity = 36/120 (30.00%), Postives = 57/120 (47.50%), Query Frame = 0


Query: 167 IVHVKLMRNNTFITVTDNKGNTKLKASAGRLEELKGGPKLSRYAAEATAEYVGRESRKLG 226
           ++HV+   NNT +TVTD +G     +SAG     +G  + + +AA+  A    R     G
Sbjct: 29  VIHVQASFNNTIVTVTDVRGRVISWSSAGTC-GFRGTRRGTPFAAQTAAGNAIRAVVDQG 88

Query: 227 LKSVVMRVKGFTYFKKKKQAILSWRDGFTDSRSDQNPIVYIEDTTRRAHNGCRLPKQRRV 286
           ++   +R+KG    +      +  R G          + ++ D T   HNGCR PK+RRV
Sbjct: 89  MQRAEVRIKGPGLGRDAALRAIR-RSGIL--------LSFVRDVTPMPHNGCRPPKKRRV 138

The following BLAST results are available for this feature:

BLAST of CmaCh04G003930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VZT8	7.1e-52	58.64	Probable ribosomal protein S11, mitochondrial OS=Arabidopsis thaliana OX=3702 GN...	[more]
P26870	1.2e-11	38.58	Ribosomal protein S11, mitochondrial OS=Marchantia polymorpha OX=3197 GN=RPS11 P...	[more]
P46746	1.6e-11	35.71	Ribosomal protein S11, mitochondrial OS=Prototheca wickerhamii OX=3111 GN=RPS11 ...	[more]
A8ETK4	1.8e-10	35.83	30S ribosomal protein S11 OS=Arcobacter butzleri (strain RM4018) OX=367737 GN=rp...	[more]
B3QYE8	2.3e-10	39.84	30S ribosomal protein S11 OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-7...	[more]

BLAST of CmaCh04G003930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KGF8	4.8e-160	100.00	probable ribosomal protein S11, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1FTT5	2.1e-152	95.10	probable ribosomal protein S11, mitochondrial OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1CJJ5	3.2e-124	83.28	probable ribosomal protein S11, mitochondrial OS=Momordica charantia OX=3673 GN=...	[more]
A0A0A0KVQ8	2.7e-107	74.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G107470 PE=3 SV=1	[more]
A0A5A7TPI6	4.1e-103	72.57	Putative ribosomal protein S11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]

BLAST of CmaCh04G003930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022999735.1	9.8e-160	100.00	probable ribosomal protein S11, mitochondrial [Cucurbita maxima]	[more]
XP_022942058.1	4.4e-152	95.10	probable ribosomal protein S11, mitochondrial [Cucurbita moschata]	[more]
KAG7030891.1	4.4e-152	95.10	putative ribosomal protein S11, mitochondrial [Cucurbita argyrosperma subsp. arg...	[more]
XP_023526167.1	4.6e-149	94.06	probable ribosomal protein S11, mitochondrial [Cucurbita pepo subsp. pepo]	[more]
KAG6600233.1	3.3e-131	95.90	putative ribosomal protein S11, mitochondrial, partial [Cucurbita argyrosperma s...	[more]

BLAST of CmaCh04G003930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31817.1	5.0e-53	58.64	Ribosomal L18p/L5e family protein	[more]
ATCG00750.1	2.3e-05	30.00	ribosomal protein S11	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001971	Ribosomal protein S11	PFAM	PF00411	Ribosomal_S11	coord: 167..285 e-value: 2.5E-13 score: 50.4
IPR001971	Ribosomal protein S11	PANTHER	PTHR11759	40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11	coord: 102..286
IPR001971	Ribosomal protein S11	HAMAP	MF_01310	Ribosomal_S11	coord: 133..286 score: 15.968771
IPR036967	Ribosomal protein S11 superfamily	GENE3D	3.30.420.80	Ribosomal protein S11	coord: 157..286 e-value: 1.1E-33 score: 118.2
None	No IPR available	PANTHER	PTHR11759:SF34	RIBOSOMAL PROTEIN S11, MITOCHONDRIAL-RELATED	coord: 102..286
None	No IPR available	SUPERFAMILY	53137	Translational machinery components	coord: 165..286

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G003930.1	CmaCh04G003930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0000028	ribosomal small subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0005763	mitochondrial small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0048027	mRNA 5'-UTR binding
molecular_function	GO:0070181	small ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome