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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. ATGTTTCAACCTGATGCGACCCAAGCCGCCACATTGGGGGCAGTCTCCCACCCATGTGCGGAGCAGTTCTGGCTGGCGTTTCGACGGCGCCGTTGGTGGTCGAGAGTGGGTGGCTGTGGTGCGGGTCGCACATATGCCGCCATTGCTTCTAAGGATTCGAGGTACTTCAAAGGCTCCCCGACTGATTTGTTGTTCGTCATTACTCCTATTACTCAGGTTCGCTAATTATTTAAAAATTGTTTTTAATTTCCAGCTTAGATAATTTGGGTTTCAATATTATTTTTCGTTCGGAATTTTAACCGCCTATGTTTCATTCTTAATTTCGTTTAAAAATTTATTTTAGTGCTTTTCTTTAAAAAAAGAAAAGAAAAAAAAAGAATTTGTATACATAATATTATTTTTTATTATTTTAAATGCGAATGATTTTATTATTACCAAGCAGAGATCTTGAAACTAAAAGAAATATTTTGGCGAATTATAAAAAAATAATCCTCTTATTAAAAAATTAAATATGAAACTTCTAATTGTATTTTTGGACTCCGTTTTTTCCATAAAAATAGATTTTAAATTAGTTCAAATTTTTAATGTATTTTCCATTTATTAAGATCAATATGATTCCGGAGCCGACAATTGCCTGTTCGTGAAGGCAATGGTCGATGCGAGGAAATTGGCAGTTCGCGACACCCTCGGGCGTGATCGATGAGACCGACACCAAGATTGAGCTCAAGCTTCC mRNA sequence ATGTTTCAACCTGATGCGACCCAAGCCGCCACATTGGGGGCAGTCTCCCACCCATGTGCGGAGCAGTTCTGGCTGGCGTTTCGACGGCGCCGTTGGTGGTCGAGAGTGGGTGGCTGTGGTGCGGGTCGCACATATGCCGCCATTGCTTCTAAGGATTCGAGGTACTTCAAAGGCTCCCCGACTGATTTGTTGTTCGTCATTACTCCTATTACTCAGATCAATATGATTCCGGAGCCGACAATTGCCTGTTCGTGAAGGCAATGGTCGATGCGAGGAAATTGGCAGTTCGCGACACCCTCGGGCGTGATCGATGAGACCGACACCAAGATTGAGCTCAAGCTTCC Coding sequence (CDS) ATGTTTCAACCTGATGCGACCCAAGCCGCCACATTGGGGGCAGTCTCCCACCCATGTGCGGAGCAGTTCTGGCTGGCGTTTCGACGGCGCCGTTGGTGGTCGAGAGTGGGTGGCTGTGGTGCGGGTCGCACATATGCCGCCATTGCTTCTAAGGATTCGAGGTACTTCAAAGGCTCCCCGACTGATTTGTTGTTCGTCATTACTCCTATTACTCAGATCAATATGATTCCGGAGCCGACAATTGCCTGTTCGTGA Protein sequence MFQPDATQAATLGAVSHPCAEQFWLAFRRRRWWSRVGGCGAGRTYAAIASKDSRYFKGSPTDLLFVITPITQINMIPEPTIACS
Homology
BLAST of CmaCh04G003650 vs. NCBI nr
Match: KAG6600200.1 (hypothetical protein SDJN03_05433, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 146.4 bits (368), Expect = 1.1e-31 Identity = 67/72 (93.06%), Postives = 70/72 (97.22%), Query Frame = 0
Query: 1 MFQPDATQAATLGAVSHPCAEQFWLAFRRRRWWSRVGGCGAGRTYAAIASKDSRYFKGSP 60
MFQPDAT+AATLGAVSHPCAEQFWLAFRRRRWWSRVGGCGAGRTYAAIASKDSR F+GSP
Sbjct: 1 MFQPDATRAATLGAVSHPCAEQFWLAFRRRRWWSRVGGCGAGRTYAAIASKDSRSFRGSP 60
Query: 61 TDLLFVITPITQ 73
TD+LFVI PITQ
Sbjct: 61 TDMLFVIAPITQ 72
BLAST of CmaCh04G003650 vs. NCBI nr
Match: XP_023532665.1 (uncharacterized protein LOC111794758 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 141.0 bits (354), Expect = 4.8e-30 Identity = 72/86 (83.72%), Postives = 74/86 (86.05%), Query Frame = 0
Query: 1 MFQPDATQAATLGAVSHPCAEQFWLAFRRRRWWSRVGGCGAGRTYAAIASKDSR--YFKG 60
MFQPDAT+AATLGAVSHPCAEQFWLAFRRRRW SRVGGCGAGR YAAIAS R G
Sbjct: 1 MFQPDATRAATLGAVSHPCAEQFWLAFRRRRWRSRVGGCGAGRAYAAIASIRIRGPSKAG 60
Query: 61 SPTDLLFVITPITQINMIPEPTIACS 85
SPTD+LFVITPITQIN I EPTIACS
Sbjct: 61 SPTDMLFVITPITQINTILEPTIACS 86
BLAST of CmaCh04G003650 vs. NCBI nr
Match: KAG7030862.1 (hypothetical protein SDJN02_04899, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 137.1 bits (344), Expect = 6.9e-29 Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 0
Query: 1 MFQPDATQAATLGAVSHPCAEQFWLAFRRRRWWSRVGGCGAGRTYAAIASKDSRYFKGSP 60
MFQPDAT+AATLGAVSHPCAEQFWLAFRRRRWWSRVGGCGAGRTYAAIASKDSR F+GSP
Sbjct: 1 MFQPDATRAATLGAVSHPCAEQFWLAFRRRRWWSRVGGCGAGRTYAAIASKDSRSFRGSP 60
Query: 61 TDLLFV 67
TD+LFV
Sbjct: 61 TDMLFV 66
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| KAG6600200.1 | 1.1e-31 | 93.06 | hypothetical protein SDJN03_05433, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
| XP_023532665.1 | 4.8e-30 | 83.72 | uncharacterized protein LOC111794758 [Cucurbita pepo subsp. pepo] | [more] |
| KAG7030862.1 | 6.9e-29 | 93.94 | hypothetical protein SDJN02_04899, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
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