CmaCh04G002350 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh04G002350
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Plant protein 1589 of unknown function
Location	Cma_Chr04: 1153318 .. 1154232 (+)
RNA-Seq Expression	CmaCh04G002350
Synteny	CmaCh04G002350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAAATTTTCTTAAAACAATTGATCCCATAAGCTCTTCACAACAAATATAATGGCTGATTCTCCTGCTGCTTACATTCATATGGTAAGTTGGTAACCCTTTCCACTCATATTTTTCTCCTAAAATCTCATCCGTCCGTTCCGATCGATCGATAACGTGTAAAAACGTTCCTCTCGCTTATAATAGGTGCAACGCTTGATTGAAATGTGTTTGATTTTCCGTATGAATAAAGAAGAGTGCATGGAAGCTGTTTCTAAACACGCCAATATCAACCCCGTAATCACCTCTACTGGTACTAGTTCGTTGACGTTTTTAATTAATCTGTTCTTCTTCCACTGTGATTCACCTCACCGGTTTCTCTTTTCTTTTAGTGTGGAAGGAATTAGAGAAAGAAAATAGAGAGTTCTTTGAAGCTTATTCCGAGTCTCGAACCATAGACGATAGAATATTAGCTGAAGAAGAGACAAGACGGTTGATCCAAAGGATTATGTCCAAACAAGATACCGATGACTAGCAAATTCTATATGCATGCATGCACCTATTACCTTGATAGTATGAGACGAGTTACATTGTTCATATCCAATTGAAACATGTCCCGTGGCCATCTTCTCAAAAAATAAGGGTCGTTATGTAATTTGCTCGTACTCGATATGATATATATTTACAATGAATTATTTTTTTATTTTTTTGGGTAAATTTTGTAGGGTAATTGAGATTGGTGACATAAGACTCTTCTCCTATCGTCCATCATTGATTGAAAATACAAATAACTCCACTGGTACTTTGTCTTTATTATTTGATGTTTATACGAGTTTAGAGACATAAATGAAGAGAGGGACAAGTAGCTTTGTAGCAATCCAAATCACGAGCTTTTCTCTAGCACTATCGAGTGTTTGTTTTACGGTCTAAACTTCCC

mRNA sequence

ACAAATTTTCTTAAAACAATTGATCCCATAAGCTCTTCACAACAAATATAATGGCTGATTCTCCTGCTGCTTACATTCATATGGTGCAACGCTTGATTGAAATGTGTTTGATTTTCCGTATGAATAAAGAAGAGTGCATGGAAGCTGTTTCTAAACACGCCAATATCAACCCCGTAATCACCTCTACTGTGTGGAAGGAATTAGAGAAAGAAAATAGAGAGTTCTTTGAAGCTTATTCCGAGTCTCGAACCATAGACGATAGAATATTAGCTGAAGAAGAGACAAGACGGTTGATCCAAAGGATTATGTCCAAACAAGATACCGATGACTAGCAAATTCTATATGCATGCATGCACCTATTACCTTGATAGTATGAGACGAGTTACATTGTTCATATCCAATTGAAACATGTCCCGTGGCCATCTTCTCAAAAAATAAGGGTCGTTATGTAATTTGCTCGTACTCGATATGATATATATTTACAATGAATTATTTTTTTATTTTTTTGGGTAAATTTTGTAGGGTAATTGAGATTGGTGACATAAGACTCTTCTCCTATCGTCCATCATTGATTGAAAATACAAATAACTCCACTGGTACTTTGTCTTTATTATTTGATGTTTATACGAGTTTAGAGACATAAATGAAGAGAGGGACAAGTAGCTTTGTAGCAATCCAAATCACGAGCTTTTCTCTAGCACTATCGAGTGTTTGTTTTACGGTCTAAACTTCCC

Coding sequence (CDS)

ATGGCTGATTCTCCTGCTGCTTACATTCATATGGTGCAACGCTTGATTGAAATGTGTTTGATTTTCCGTATGAATAAAGAAGAGTGCATGGAAGCTGTTTCTAAACACGCCAATATCAACCCCGTAATCACCTCTACTGTGTGGAAGGAATTAGAGAAAGAAAATAGAGAGTTCTTTGAAGCTTATTCCGAGTCTCGAACCATAGACGATAGAATATTAGCTGAAGAAGAGACAAGACGGTTGATCCAAAGGATTATGTCCAAACAAGATACCGATGACTAG

Protein sequence

MADSPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYSESRTIDDRILAEEETRRLIQRIMSKQDTDD

Homology

[Close]

BLAST of CmaCh04G002350 vs. ExPASy TrEMBL
Match: A0A6J1JF00 (uncharacterized protein LOC111483901 OS=Cucurbita maxima OX=3661 GN=LOC111483901 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.5e-43
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MADSPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFE 60
          MADSPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFE
Sbjct: 1  MADSPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFE 60

Query: 61 AYSESRTIDDRILAEEETRRLIQRIMSKQDTDD 94
          AYSESRTIDDRILAEEETRRLIQRIMSKQDTDD
Sbjct: 61 AYSESRTIDDRILAEEETRRLIQRIMSKQDTDD 93

[Close]

BLAST of CmaCh04G002350 vs. ExPASy TrEMBL
Match: A0A6J1FWJ0 (uncharacterized protein LOC111448003 OS=Cucurbita moschata OX=3662 GN=LOC111448003 PE=4 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.1e-41
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1  MADSPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFE 60
          MADS AAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFE
Sbjct: 1  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFE 60

Query: 61 AYSESRTIDDRILAEEETRRLIQRIMSKQDTDD 94
          AYSESRTIDDRILAEEETRRLIQR+MSKQDTD+
Sbjct: 61 AYSESRTIDDRILAEEETRRLIQRMMSKQDTDN 93

[Close]

BLAST of CmaCh04G002350 vs. ExPASy TrEMBL
Match: A0A6J1CBZ2 (uncharacterized protein LOC111010170 OS=Momordica charantia OX=3673 GN=LOC111010170 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 9.4e-33
Identity = 75/93 (80.65%), Postives = 85/93 (91.40%), Query Frame = 0


Query: 1  MADSPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFE 60
          MADS AAYIHMVQ LIE CLIF MNK+ECMEA+SKHANI+P+ITSTVWKELEKENREFFE
Sbjct: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFE 60

Query: 61 AYSESRTIDDRILAEEETRRLIQRIMSKQDTDD 94
          AY ESR  +DRILAEEETR+LI+R++SK D+DD
Sbjct: 61 AYXESRNKNDRILAEEETRQLIERMISK-DSDD 92

[Close]

BLAST of CmaCh04G002350 vs. ExPASy TrEMBL
Match: A0A0A0KQ71 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G179770 PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.1e-32
Identity = 73/92 (79.35%), Postives = 82/92 (89.13%), Query Frame = 0


Query: 1  MADSPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFE 60
          MADS AAYIHMVQ LIE CLIF MNK+EC+EA+SKHANI+P+ITSTVWKELEKENREFFE
Sbjct: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPIITSTVWKELEKENREFFE 60

Query: 61 AYSESRTIDDRILAEEETRRLIQRIMSKQDTD 93
          AYSE +  +DRILAEEETR+LIQR+MSK   D
Sbjct: 61 AYSECKGRNDRILAEEETRKLIQRMMSKHSDD 92

[Close]

BLAST of CmaCh04G002350 vs. ExPASy TrEMBL
Match: A0A5A7V1X1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold321G00180 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 8.0e-32
Identity = 72/93 (77.42%), Postives = 83/93 (89.25%), Query Frame = 0


Query: 1  MADSPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFE 60
          MADS AAYIHMVQ LIE CLIF MNK+EC+EA+SKHANI+PVITSTVWKELEKENREFFE
Sbjct: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECIEALSKHANISPVITSTVWKELEKENREFFE 60

Query: 61 AYSESRTIDDRILAEEETRRLIQRIMSKQDTDD 94
          AYSE +  +DRILAEEETR+LIQR+M  + +D+
Sbjct: 61 AYSECKGRNDRILAEEETRKLIQRMMMSKHSDE 93

[Close]

BLAST of CmaCh04G002350 vs. NCBI nr
Match: XP_022986049.1 (uncharacterized protein LOC111483901 [Cucurbita maxima])

HSP 1 Score: 184.9 bits (468), Expect = 3.2e-43
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MADSPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFE 60
          MADSPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFE
Sbjct: 1  MADSPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFE 60

Query: 61 AYSESRTIDDRILAEEETRRLIQRIMSKQDTDD 94
          AYSESRTIDDRILAEEETRRLIQRIMSKQDTDD
Sbjct: 61 AYSESRTIDDRILAEEETRRLIQRIMSKQDTDD 93

[Close]

BLAST of CmaCh04G002350 vs. NCBI nr
Match: XP_023547240.1 (uncharacterized protein LOC111806113 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 179.1 bits (453), Expect = 1.8e-41
Identity = 90/93 (96.77%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 1  MADSPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFE 60
          MADS AAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFE
Sbjct: 1  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFE 60

Query: 61 AYSESRTIDDRILAEEETRRLIQRIMSKQDTDD 94
          AYSESRTIDDRIL EEETRRLIQR+MSKQDTDD
Sbjct: 61 AYSESRTIDDRILVEEETRRLIQRMMSKQDTDD 93

[Close]

BLAST of CmaCh04G002350 vs. NCBI nr
Match: XP_022943203.1 (uncharacterized protein LOC111448003 [Cucurbita moschata])

HSP 1 Score: 178.7 bits (452), Expect = 2.3e-41
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1  MADSPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFE 60
          MADS AAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFE
Sbjct: 1  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFE 60

Query: 61 AYSESRTIDDRILAEEETRRLIQRIMSKQDTDD 94
          AYSESRTIDDRILAEEETRRLIQR+MSKQDTD+
Sbjct: 61 AYSESRTIDDRILAEEETRRLIQRMMSKQDTDN 93

[Close]

BLAST of CmaCh04G002350 vs. NCBI nr
Match: KAG6600072.1 (hypothetical protein SDJN03_05305, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 172.6 bits (436), Expect = 1.6e-39
Identity = 89/95 (93.68%), Postives = 92/95 (96.84%), Query Frame = 0


Query: 1  MADSPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITS--TVWKELEKENREF 60
          MADS AAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITS  TVWKELEKENREF
Sbjct: 1  MADSSAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTGTVWKELEKENREF 60

Query: 61 FEAYSESRTIDDRILAEEETRRLIQRIMSKQDTDD 94
          FEAYSESRTIDDRILAEEET+RLIQR+MSKQDTD+
Sbjct: 61 FEAYSESRTIDDRILAEEETKRLIQRMMSKQDTDN 95

[Close]

BLAST of CmaCh04G002350 vs. NCBI nr
Match: XP_022139201.1 (uncharacterized protein LOC111010170 [Momordica charantia])

HSP 1 Score: 149.8 bits (377), Expect = 1.1e-32
Identity = 75/93 (80.65%), Postives = 85/93 (91.40%), Query Frame = 0


Query: 1  MADSPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFE 60
          MADS AAYIHMVQ LIE CLIF MNK+ECMEA+SKHANI+P+ITSTVWKELEKENREFFE
Sbjct: 1  MADSSAAYIHMVQHLIEKCLIFHMNKDECMEALSKHANISPIITSTVWKELEKENREFFE 60

Query: 61 AYSESRTIDDRILAEEETRRLIQRIMSKQDTDD 94
          AY ESR  +DRILAEEETR+LI+R++SK D+DD
Sbjct: 61 AYXESRNKNDRILAEEETRQLIZRMISK-DSDD 92

[Close]

BLAST of CmaCh04G002350 vs. TAIR 10
Match: AT3G55240.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 117.9 bits (294), Expect = 4.5e-27
Identity = 61/96 (63.54%), Postives = 81/96 (84.38%), Query Frame = 0


Query: 1  MAD-SPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFF 60
          MAD S A+YIHMVQ +IE CLIF M+KEEC+EA+SKHANI PVITSTVWKELEKEN+EFF
Sbjct: 1  MADSSSASYIHMVQHMIEKCLIFHMSKEECVEALSKHANITPVITSTVWKELEKENKEFF 60

Query: 61 EAYSESRTIDDRILAEEETRRLIQRIM--SKQDTDD 94
          +AY E ++  ++ ++EEET ++IQ+I+  S +++DD
Sbjct: 61 KAYEERQSKQEQ-MSEEETNQMIQKIISDSSKESDD 95

[Close]

BLAST of CmaCh04G002350 vs. TAIR 10
Match: AT3G28990.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 110.5 bits (275), Expect = 7.1e-25
Identity = 53/84 (63.10%), Postives = 68/84 (80.95%), Query Frame = 0


Query: 4  SPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYS 63
          SPA YIH+VQ +IE CL F M+KEECMEA+S++ANINP+ITSTVWKEL KEN++FFE Y 
Sbjct: 5  SPAVYIHLVQHMIETCLTFNMSKEECMEALSENANINPIITSTVWKELVKENKDFFETY- 64

Query: 64 ESRTIDDRILAEEETRRLIQRIMS 88
          E + +    ++EEET +LIQ I+S
Sbjct: 65 EQKLMKKESMSEEETNQLIQNIIS 87

[Close]

BLAST of CmaCh04G002350 vs. TAIR 10
Match: AT5G02580.1 (Plant protein 1589 of unknown function )

HSP 1 Score: 102.8 bits (255), Expect = 1.5e-22
Identity = 50/85 (58.82%), Postives = 64/85 (75.29%), Query Frame = 0


Query: 4  SPAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAYS 63
          S A+YIH+V  LIE C++F M KEECM+A+ KHANI P+ITSTVWKEL KEN+EFFEAY 
Sbjct: 7  SQASYIHLVHHLIEECIVFNMGKEECMDALFKHANIKPIITSTVWKELAKENKEFFEAYE 66

Query: 64 ESRTIDDRILAEEETRRLIQRIMSK 89
            R   + I  E+ET R I+ ++S+
Sbjct: 67 RRR---EEIPTEKETARRIRDLLSR 88

[Close]

BLAST of CmaCh04G002350 vs. TAIR 10
Match: AT1G10657.2 (Plant protein 1589 of unknown function )

HSP 1 Score: 74.7 bits (182), Expect = 4.3e-14
Identity = 29/58 (50.00%), Postives = 46/58 (79.31%), Query Frame = 0


Query: 5  PAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAY 63
          P +YI MVQ +IE C++ RM ++EC++A+  HA+I P++T TVW+ L++EN++FFE Y
Sbjct: 20 PHSYIRMVQHMIERCILLRMTRDECVKALDHHASILPLVTLTVWRGLQRENKDFFETY 77

[Close]

BLAST of CmaCh04G002350 vs. TAIR 10
Match: AT1G10657.3 (Plant protein 1589 of unknown function )

HSP 1 Score: 74.7 bits (182), Expect = 4.3e-14
Identity = 29/58 (50.00%), Postives = 46/58 (79.31%), Query Frame = 0


Query: 5  PAAYIHMVQRLIEMCLIFRMNKEECMEAVSKHANINPVITSTVWKELEKENREFFEAY 63
          P +YI MVQ +IE C++ RM ++EC++A+  HA+I P++T TVW+ L++EN++FFE Y
Sbjct: 20 PHSYIRMVQHMIERCILLRMTRDECVKALDHHASILPLVTLTVWRGLQRENKDFFETY 77

The following BLAST results are available for this feature:

BLAST of CmaCh04G002350 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh04G002350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1JF00	1.5e-43	100.00	uncharacterized protein LOC111483901 OS=Cucurbita maxima OX=3661 GN=LOC111483901...	[more]
A0A6J1FWJ0	1.1e-41	96.77	uncharacterized protein LOC111448003 OS=Cucurbita moschata OX=3662 GN=LOC1114480...	[more]
A0A6J1CBZ2	9.4e-33	80.65	uncharacterized protein LOC111010170 OS=Momordica charantia OX=3673 GN=LOC111010...	[more]
A0A0A0KQ71	2.1e-32	79.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G179770 PE=4 SV=1	[more]
A0A5A7V1X1	8.0e-32	77.42	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of CmaCh04G002350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022986049.1	3.2e-43	100.00	uncharacterized protein LOC111483901 [Cucurbita maxima]	[more]
XP_023547240.1	1.8e-41	96.77	uncharacterized protein LOC111806113 [Cucurbita pepo subsp. pepo]	[more]
XP_022943203.1	2.3e-41	96.77	uncharacterized protein LOC111448003 [Cucurbita moschata]	[more]
KAG6600072.1	1.6e-39	93.68	hypothetical protein SDJN03_05305, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022139201.1	1.1e-32	80.65	uncharacterized protein LOC111010170 [Momordica charantia]	[more]

BLAST of CmaCh04G002350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55240.1	4.5e-27	63.54	Plant protein 1589 of unknown function	[more]
AT3G28990.1	7.1e-25	63.10	Plant protein 1589 of unknown function	[more]
AT5G02580.1	1.5e-22	58.82	Plant protein 1589 of unknown function	[more]
AT1G10657.2	4.3e-14	50.00	Plant protein 1589 of unknown function	[more]
AT1G10657.3	4.3e-14	50.00	Plant protein 1589 of unknown function	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006476	Conserved hypothetical protein CHP01589, plant	TIGRFAM	TIGR01589	TIGR01589	coord: 9..63 e-value: 4.7E-23 score: 79.0
IPR006476	Conserved hypothetical protein CHP01589, plant	PFAM	PF09713	A_thal_3526	coord: 12..63 e-value: 3.8E-25 score: 87.9
IPR006476	Conserved hypothetical protein CHP01589, plant	PANTHER	PTHR31871	OS02G0137100 PROTEIN	coord: 1..88
None	No IPR available	PANTHER	PTHR31871:SF18	ANGIOTENSIN-CONVERTING ENZYME 2-RELATED	coord: 1..88

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh04G002350.1	CmaCh04G002350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032502	developmental process