CmaCh04G002070 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G002070
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionCyclin-dependent protein kinase inhibitor SMR4
LocationCma_Chr04: 982276 .. 986427 (-)
RNA-Seq ExpressionCmaCh04G002070
SyntenyCmaCh04G002070
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGAGGAAAAGAAGGATATATGCCGCACGCCGCGACGGAAGAGCTGCCGGATTCCGGTGACGGTGTTGTGCCCGGCGGCGCCGAGGAAGAAGGCGGTTAGCTTGAAGCGCAAGGCTCCGCCGAAGGACGGGTACTTTCGGCCGCCGGATTTGGAGGTGTTGTTCGGCTTTGTTGCTCCAAGAATAGATGTATATGTACGTAATAACCTCTGAACAAAATCAACATGAGTATAGTTCAGTTTACCTTACATTACTTTTAATATTTCTACCATTTTCATTTTAAATATTTCATGGATAAAATTATTATTGAGTTAGAGCGTATTACTCATCTTAATTAATTAGATAAGACATATAACCTAAGGAAAAAAAAATTTCAATACTTGAGCTAAGGGCTTGTTACTTAAAATAGCTAAAAAGGCCCATAGCCATCTCTAACACAATCTTAATCCATGCATCTTAAGTCAATTAAGCCCGCCTAATCAAATGCATAAAAAAAATAATATTTTAATAGTTGAGTTATACCGAAATTAATAAAGAAAAAAACAAATTTTTTCTTATAGTCAGATCTTATATTTTATTCTTTTAAAGATATTTTAAATTTTAATATATATATATATATATATATATATATAATAGATTAAATGATTCAAACATGTAACATACAGATCTTTATCAATTTTACATCATAATTATTCACTTTGATACAATATATATATTTTTTCTTTTATTGTTGAACCGCATTATGCATCATTGATATCGTAGCAAAATAGAATTATTAATTATACCTATTTTTTAATTATTATTATTATTATTATTATCAATATTATAAAAAAAAAATGTACATAAAATATCATTAAAAAAATTTGGGCCACATCATTAAAAAAAAATATTTTTTTTTCATGTCCAACTTGCATATTTTTGTCTCCAAATGGAAATCATAAAATAAAAGAAAGAGATAAAGCTGCACAACAAAGATAAAGAAATGTGTGTGTGTGTGTATATATATATATATATATATAATTTGGATTAATTTATTTAAGAGAGATTCTGCTACCTAACCTACGAACATGCCATAATCTATGGGGTTTTTGCCTATTCCTTCTAATTACTTAATTTGTTTTATGACATGCAAATTAATGAGTTTAATTTCATTATCAATTTCCCCAATAATAATAATAATAATGGTTGGATAATGAAAGTCTCATTCGTTCATTTAAAGAATAATTATAAGTTTATAATGAAAGAATACTCTCCCCATTAGTACGAGGCCTTTTGGAGAGCACAAACAAAAGTACTAGAGCTTACGTTCAAAGTGGACAATATTATACCATTATAAAGAGTCAACCAATTATTTGAATTTTCTTATTCAAATTGGTGATGCTATGTGATTGGATTTTATTCATATATTTTTTCCATTATTTATTCCGTCTAATTAAAACAAATATATTCATTAACATTTATTTTGTAATTTAAAATTTATTGAGACACAATTTTGGTCTGCACTCAAAATCATCTTTCACGATTTTGTTGTCTCCCATTTTTTCTTCTTATTATTTGTTTATTCTCCTAACTTGGATTTCACTATTCCAAATCTTTGTTTCCAACGGATTCTTATATATAGATTATTATAATTCTATTTATCTATGATTCAGTACCTTTGTTTTAATTTTTTTTTGTTTAATTAGCTGAATTATTTGTGAGTTTAATTAGCTGGTTAACCTATGATTTTTTAATTTAGTGTTTGAGATTAATTAATTTAAAATTCAATTTAATTATGGAGTAATATAGGTTGGAGTTGATTCATCAGCTGGCTTCTTCACAAATTTATCCCCATCCCCGATGAGTTAAGAATCATTACTCTCCACAATAGTATATGATATTGTCTAGTTTGAGCACTTTACTTTGACTTCCACAAAAGGTCTCGATCAATAAAGATACTATGATCTTCCATTTTTTTTGGTGCTCACTGGTTTCCATCTCATCTAATTTTTTCCATGTCTTTGGCCCGAGCCGTATGAGCACAATTAATCTTCCAGGTTTGTTTGAGCTTCAAATCAAGAAAACAAAAGGAAAAGAATGCTATTGAGATTCATGAATCTGAATTAAATGAACAATGTGGGCATTTGGTTAATGGATGTTGCAATTTCACTTTCAGCGCCTTCATTTCTCTGTTCATTGAAGAAAGGCACTGGTTGGGGATTTGAGATTTGAGCAAGAAGAAACATGTCTTTTTGGGGGAAAGTGAAAGCTTGTATGCCAAATCAAAGCTAGGACCGAGTACTGTTTTAAATGAGAATCCACGATTTGGGTCACTGAACAATGATCAGAATCAATCATTTGATGGGGTCAAACAAAAAGTGTCCCCAAGGTGTTCGACGAAATGCCTGTGGGACAAATCAAGGGACAACCATATCTTGTGCTTGTTGGAGAAGTTGTCTGGTGACTCGTGAGGTTAGTAGTACCAAAAAACTCCTTTTGGCTATGACTGAAATGTTCGGATAAATTTTGTTTGTGGACTAAATGCATTTAACCCAAGTTGATGAACCCAGAAAGCTAGCTAATTGCACATGTTTTGAGCTTTGAGTCCCCTTGAGAAGGGAAACTGTTTGGGAATTTAATTGCTCTGTTTTAGTACATTGGTCTGCTCTGTATTAAAGCCATCATCTCACTTGCATTCTTACAGTTTCTTTAGCTTCGGTTTTTGAACTCTGATGGGGATGAATGTGATAGCCTTTTAGTCGAATTCTTTTCTATTTGAGAATCTCGTGTGCTTAGACTTTGACCCATTTTTGCCTGAATATATCAGTGGGATTAATGAAATTAGTTGGGTTGGTAATATTTTAGATCAGTTTAAGGCTTAGGTTAGTTTTACAACTACACATGGGATCATGTGCTTTTGTTTTTGGGCAGCCAGAGAGAGAAAGGTTTGACTTGACCAAATTTAGAATAAAATCCTTGTTTGTATTAATATGAAGTTAAATTAACACCATAGTTTTGCAACATTTTCTCATTAAAAATAGTGTTGTCCATGTCATGCATATGCAAAATCTACTGATTAAGCTTATTTTATTCTTGTTGACATTCATATATATATTGTGTAGAGAAAAATTTTAGGCGTCATTTATAATATAAAATAAAGTAGTAATAAGAACAAAATACCAGGACTCTTTTTATTTTTTAAGTACAATTTTATATTATAAACGAAATAAAACTTTTCACCCATGCCATTAACAAAAATGTAAAGAACAAACAAAAAAAGATGTAAACAAGAGGGACTTGAATGCATTCTTAGGAGCAGTGTGCTAGCGAGGATCTTGGGCCCCAAGGAGGGTGGATTGTAAGATCTCACCTTGATTGAAGAGGAGAATGAAGCATTTCTTATAACGATGTAAAAACTTCTTCCTAATAGACGCGTTTTAGAAAATTTGAGGGAAATCCTGAAAGGGAAAGACCAAAGAGGACAATATCTGCTAGTGGTGGACTTGACCCGTTACTTAATAACACATTACCCGTGTTTTGTTGTATCCAAAATCATTAACTTTTTTCGTCCAATCCCAAAAAATAACTCCAGTATTTTCTTTTTGCATCCTCGTGTATTCTTATTCATTAGTTAACTGATTAAGGTAGGCATTTGATCTGAACAATCCAAAAGAAAACAGAGTTCTTCAACAACTGAAGGAATCTCAAGCTCAAAAGTTAAGAGAGCATCTCGAATTCTATATAGAAAACATGAATATGACAAGATTTGCAATAAGACTCACATCAGAAATCCCTAATGGAATCAAAACATTTTCCAAAGATTATAAAATTAAACAAACCAATTGGCTCAAGCCTTCAATAAACCCATAATGATTGCGCTTTTAGTTCTTTAACTATTCAGTTGCTTTTAGGTCTTCATGCAGACAATGAGCCAAAAGCATACGTTTTTTTTCCCTTCCTGCTTGCAGTTGCAAGCGTTTTTCTTTGCAGCTGGAAGTTTTCGAATTGCTAGTCAAAGATTCCTCGCTCATCCAATGAGCGAAAAAAGGGGATCAGAAAGCAAAGAGAGAGCTACTGATCATTTTCATGCTTACTTCCTTTTCCTTTTATTTTAATCATATAATCATTTTCATCTTTTTTTACTCTGTCATTATGTAAGAAAGTAATGTC

mRNA sequence

ATGGCTGAGGAAAAGAAGGATATATGCCGCACGCCGCGACGGAAGAGCTGCCGGATTCCGGTGACGGTGTTGTGCCCGGCGGCGCCGAGGAAGAAGGCGGTTAGCTTGAAGCGCAAGGCTCCGCCGAAGGACGGGTACTTTCGGCCGCCGGATTTGGAGGTGTTGTTCGGCTTTGTTGCTCCAAGAATAGATGTATATTGTCCCCAAGGTGTTCGACGAAATGCCTGTGGGACAAATCAAGGGACAACCATATCTTGTGCTTGTTGGAGAAGTTGTCTGGTGACTCGTGAGTTGCAAGCGTTTTTCTTTGCAGCTGGAAGTTTTCGAATTGCTAGTCAAAGATTCCTCGCTCATCCAATGAGCGAAAAAAGGGGATCAGAAAGCAAAGAGAGAGCTACTGATCATTTTCATGCTTACTTCCTTTTCCTTTTATTTTAATCATATAATCATTTTCATCTTTTTTTACTCTGTCATTATGTAAGAAAGTAATGTC

Coding sequence (CDS)

ATGGCTGAGGAAAAGAAGGATATATGCCGCACGCCGCGACGGAAGAGCTGCCGGATTCCGGTGACGGTGTTGTGCCCGGCGGCGCCGAGGAAGAAGGCGGTTAGCTTGAAGCGCAAGGCTCCGCCGAAGGACGGGTACTTTCGGCCGCCGGATTTGGAGGTGTTGTTCGGCTTTGTTGCTCCAAGAATAGATGTATATTGTCCCCAAGGTGTTCGACGAAATGCCTGTGGGACAAATCAAGGGACAACCATATCTTGTGCTTGTTGGAGAAGTTGTCTGGTGACTCGTGAGTTGCAAGCGTTTTTCTTTGCAGCTGGAAGTTTTCGAATTGCTAGTCAAAGATTCCTCGCTCATCCAATGAGCGAAAAAAGGGGATCAGAAAGCAAAGAGAGAGCTACTGATCATTTTCATGCTTACTTCCTTTTCCTTTTATTTTAA

Protein sequence

MAEEKKDICRTPRRKSCRIPVTVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPRIDVYCPQGVRRNACGTNQGTTISCACWRSCLVTRELQAFFFAAGSFRIASQRFLAHPMSEKRGSESKERATDHFHAYFLFLLF
Homology
[Close]
BLAST of CmaCh04G002070 vs. ExPASy Swiss-Prot
Match: Q1JPP8 (Cyclin-dependent protein kinase inhibitor SMR4 OS=Arabidopsis thaliana OX=3702 GN=SMR4 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-09
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 0 

Query: 1  MAEEKKDICRTPRRKSCRIPVTVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVA 60
          MAEE    C TPR    RIPV  +CP  PRKK + ++++ PP++GYF+PPDLE LF +  
Sbjct: 10 MAEEG---CTTPRSTMYRIPVASVCPPPPRKKLMVVRKRDPPRNGYFQPPDLETLF-YAQ 67

Query: 61 PR 63
          PR
Sbjct: 70 PR 67

[Close]
BLAST of CmaCh04G002070 vs. ExPASy Swiss-Prot
Match: Q9LNX4 (Cyclin-dependent protein kinase inhibitor SMR5 OS=Arabidopsis thaliana OX=3702 GN=SMR5 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.8e-07
Identity = 27/55 (49.09%), Postives = 33/55 (60.00%), Query Frame = 0 

Query: 9  CRTPRRKSCRIPVTVLCPAAPRKKAVSL---KRKAPPKDGYFRPPDLEVLFGFVA 61
          C TP R  CRIP    CP   R+K   L   K++ PPK GYF+PPDL++ F  VA
Sbjct: 22 CTTPTRDDCRIPAYPPCPPPVRRKRSLLGFGKKREPPKKGYFQPPDLDLFFSVVA 76

[Close]
BLAST of CmaCh04G002070 vs. ExPASy Swiss-Prot
Match: Q1G3Y4 (Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 GN=SMR15 PE=3 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 1.6e-04
Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 0 

Query: 4   EKKDIC-RTPRRKSCRIPVTVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLF 57
           E +D+C  TP   S RIP  + CP AP+K+ ++LK    P++ +F PPDLE +F
Sbjct: 49  EDEDLCPTTPTADSVRIPTVIPCPPAPKKRKLTLKVSYGPRE-FFSPPDLETVF 101

[Close]
BLAST of CmaCh04G002070 vs. ExPASy TrEMBL
Match: A0A0A0KS84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G182660 PE=4 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.9e-19
Identity = 48/62 (77.42%), Postives = 54/62 (87.10%), Query Frame = 0 

Query: 1  MAEEKKDICRTPRRKSCRIPVTVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVA 60
          MAEE  ++CRTPRR+SCRIPV + CP+APRKK V LKRKAPPK+GYFR PDLEVLFGFV 
Sbjct: 1  MAEETVELCRTPRRRSCRIPVAMACPSAPRKKPVCLKRKAPPKEGYFRSPDLEVLFGFVT 60

Query: 61 PR 63
          PR
Sbjct: 61 PR 62

[Close]
BLAST of CmaCh04G002070 vs. ExPASy TrEMBL
Match: B9T003 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0040060 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 4.6e-10
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 0 

Query: 9  CRTPRRKSCRIPVT-VLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPRIDVYC 68
          CRTP R+ CRIP   V CP APRKK V +K++ PPKDGYF+PPDLE  F  + PR +  C
Sbjct: 8  CRTPIRRECRIPAAPVACPPAPRKKPVHIKQRDPPKDGYFQPPDLEAFF-LITPRREASC 66

[Close]
BLAST of CmaCh04G002070 vs. ExPASy TrEMBL
Match: A0A498K4J3 (Laccase OS=Malus domestica OX=3750 GN=DVH24_026747 PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 6.0e-10
Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 0 

Query: 9  CRTPRRKSCRIPVTVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPRIDVYC 68
          C TP+R+ CRIP   +CP  PRKKAV   ++ PPK+GYF+PPDL+ LF  + PR  V+C
Sbjct: 5  CATPKRRECRIPEANMCPPPPRKKAVGETKREPPKNGYFQPPDLDTLFA-LPPRTQVFC 62

[Close]
BLAST of CmaCh04G002070 vs. ExPASy TrEMBL
Match: A0A067LKR5 (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_01434 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 6.0e-10
Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = 0 

Query: 3  EEKKDICRTPRRKSCRIPVTVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPR 62
          E   ++C TPRR+  RIP T+ CP AP+KK+V  K   PP DGYF+PPDLE +F  +APR
Sbjct: 2  EVDHEVCMTPRRRESRIPATLACPPAPKKKSVRFKETTPPNDGYFQPPDLESIF-VIAPR 60

[Close]
BLAST of CmaCh04G002070 vs. ExPASy TrEMBL
Match: A0A6S7P9N6 (Uncharacterized protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS34877 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.0e-09
Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = 0 

Query: 6   KDICRTPRRKSCRIPVTVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPRIDV 65
           +D CRTP++  CRIPVT  CP APRKK   LK+++PP++GYF+PPDLE+LF      I  
Sbjct: 68  EDGCRTPKQSGCRIPVT--CPPAPRKKQAYLKQRSPPENGYFQPPDLEILFAMPPTPIRE 127

Query: 66  YC 68
            C
Sbjct: 128 AC 127

[Close]
BLAST of CmaCh04G002070 vs. NCBI nr
Match: KAG6600042.1 (Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030712.1 Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 133.7 bits (335), Expect = 1.3e-27
Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 0 

Query: 1  MAEEKKDICRTPRRKSCRIPVTVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVA 60
          MAEEKKDICRTPRRKSCRIPV VLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVA
Sbjct: 1  MAEEKKDICRTPRRKSCRIPVAVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVA 60

Query: 61 PRIDVY 67
          PR DVY
Sbjct: 61 PRGDVY 66

[Close]
BLAST of CmaCh04G002070 vs. NCBI nr
Match: KAE8647993.1 (hypothetical protein Csa_021483 [Cucumis sativus])

HSP 1 Score: 105.5 bits (262), Expect = 3.8e-19
Identity = 48/62 (77.42%), Postives = 54/62 (87.10%), Query Frame = 0 

Query: 1  MAEEKKDICRTPRRKSCRIPVTVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVA 60
          MAEE  ++CRTPRR+SCRIPV + CP+APRKK V LKRKAPPK+GYFR PDLEVLFGFV 
Sbjct: 1  MAEETVELCRTPRRRSCRIPVAMACPSAPRKKPVCLKRKAPPKEGYFRSPDLEVLFGFVT 60

Query: 61 PR 63
          PR
Sbjct: 61 PR 62

[Close]
BLAST of CmaCh04G002070 vs. NCBI nr
Match: XP_021655298.1 (cyclin-dependent protein kinase inhibitor SMR4-like [Hevea brasiliensis])

HSP 1 Score: 77.8 bits (190), Expect = 8.6e-11
Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 0 

Query: 3  EEKKDICRTPRRKSCRIPVTVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPR 62
          E   ++C TPRR+  RIP  + CP APRKK V  K+++PPKDGYF+PPDLE LF  +APR
Sbjct: 2  EVDHEVCNTPRRRESRIPAALACPPAPRKKPVFSKKRSPPKDGYFQPPDLEALF-MIAPR 60

[Close]
BLAST of CmaCh04G002070 vs. NCBI nr
Match: EEF30808.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 74.3 bits (181), Expect = 9.5e-10
Identity = 35/60 (58.33%), Postives = 42/60 (70.00%), Query Frame = 0 

Query: 9  CRTPRRKSCRIPVT-VLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPRIDVYC 68
          CRTP R+ CRIP   V CP APRKK V +K++ PPKDGYF+PPDLE  F  + PR +  C
Sbjct: 8  CRTPIRRECRIPAAPVACPPAPRKKPVHIKQRDPPKDGYFQPPDLEAFF-LITPRREASC 66

[Close]
BLAST of CmaCh04G002070 vs. NCBI nr
Match: RXI02217.1 (hypothetical protein DVH24_026747 [Malus domestica])

HSP 1 Score: 73.9 bits (180), Expect = 1.2e-09
Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 0 

Query: 9  CRTPRRKSCRIPVTVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVAPRIDVYC 68
          C TP+R+ CRIP   +CP  PRKKAV   ++ PPK+GYF+PPDL+ LF  + PR  V+C
Sbjct: 5  CATPKRRECRIPEANMCPPPPRKKAVGETKREPPKNGYFQPPDLDTLFA-LPPRTQVFC 62

[Close]
BLAST of CmaCh04G002070 vs. TAIR 10
Match: AT5G02220.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-10
Identity = 32/62 (51.61%), Postives = 42/62 (67.74%), Query Frame = 0 

Query: 1  MAEEKKDICRTPRRKSCRIPVTVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLFGFVA 60
          MAEE    C TPR    RIPV  +CP  PRKK + ++++ PP++GYF+PPDLE LF +  
Sbjct: 10 MAEEG---CTTPRSTMYRIPVASVCPPPPRKKLMVVRKRDPPRNGYFQPPDLETLF-YAQ 67

Query: 61 PR 63
          PR
Sbjct: 70 PR 67

[Close]
BLAST of CmaCh04G002070 vs. TAIR 10
Match: AT1G60783.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G10690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 1.2e-05
Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 0 

Query: 4   EKKDIC-RTPRRKSCRIPVTVLCPAAPRKKAVSLKRKAPPKDGYFRPPDLEVLF 57
           E +D+C  TP   S RIP  + CP AP+K+ ++LK    P++ +F PPDLE +F
Sbjct: 49  EDEDLCPTTPTADSVRIPTVIPCPPAPKKRKLTLKVSYGPRE-FFSPPDLETVF 101

[Close]
BLAST of CmaCh04G002070 vs. TAIR 10
Match: AT1G10690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G60783.1); Has 59 Blast hits to 59 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 8.3e-04
Identity = 26/55 (47.27%), Postives = 31/55 (56.36%), Query Frame = 0 

Query: 4   EKKDIC-RTPRRKSCRIPVTVLCPAAPRKKAVSLK-RKAPPKDGYFRPPDLEVLF 57
           E++D C  TP   S RIP    CPAAP+K+  SLK         YF PPDLE +F
Sbjct: 50  EEQDQCPTTPTAVSVRIPRVPPCPAAPKKRKPSLKCSYVTVTRDYFSPPDLETVF 104

The following BLAST results are available for this feature:
BLAST of CmaCh04G002070 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q1JPP81.7e-0951.61Cyclin-dependent protein kinase inhibitor SMR4 OS=Arabidopsis thaliana OX=3702 G... [more]
Q9LNX47.8e-0749.09Cyclin-dependent protein kinase inhibitor SMR5 OS=Arabidopsis thaliana OX=3702 G... [more]
Q1G3Y41.6e-0444.44Cyclin-dependent protein kinase inhibitor SMR15 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of CmaCh04G002070 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KS841.9e-1977.42Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G182660 PE=4 SV=1[more]
B9T0034.6e-1058.33Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0040060 PE=4 SV=1[more]
A0A498K4J36.0e-1054.24Laccase OS=Malus domestica OX=3750 GN=DVH24_026747 PE=3 SV=1[more]
A0A067LKR56.0e-1055.00Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_01434 PE=4 SV=1[more]
A0A6S7P9N61.0e-0954.84Uncharacterized protein OS=Lactuca saligna OX=75948 GN=LSAL_LOCUS34877 PE=4 SV=1[more]
BLAST of CmaCh04G002070 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6600042.11.3e-2796.97Cyclin-dependent protein kinase inhibitor SMR4, partial [Cucurbita argyrosperma ... [more]
KAE8647993.13.8e-1977.42hypothetical protein Csa_021483 [Cucumis sativus][more]
XP_021655298.18.6e-1158.33cyclin-dependent protein kinase inhibitor SMR4-like [Hevea brasiliensis][more]
EEF30808.19.5e-1058.33conserved hypothetical protein [Ricinus communis][more]
RXI02217.11.2e-0954.24hypothetical protein DVH24_026747 [Malus domestica][more]
BLAST of CmaCh04G002070 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G02220.11.2e-1051.61unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
AT1G60783.11.2e-0544.44unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT1G10690.18.3e-0447.27unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040389Cyclin-dependent protein kinase inhibitor SMRPANTHERPTHR33142CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR13coord: 3..62
NoneNo IPR availablePANTHERPTHR33142:SF56CYCLIN-DEPENDENT PROTEIN KINASE INHIBITOR SMR5coord: 3..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G002070.1CmaCh04G002070.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045839 negative regulation of mitotic nuclear division
biological_process GO:0032875 regulation of DNA endoreduplication
cellular_component GO:0005634 nucleus
molecular_function GO:0003824 catalytic activity