CmaCh04G001580 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G001580
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionnuclear pore complex protein NUP88-like
LocationCma_Chr04: 782610 .. 789143 (+)
RNA-Seq ExpressionCmaCh04G001580
SyntenyCmaCh04G001580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATAAAAAAATAATGTTTCTAAGATTTTGAAATTTTAAAAATGTAAAATTTTCAAAATTTAATGACTAATTTAAAGAAGGTATCAAAGCTAAGCTACTGCGCCTCTAACTTCAACAATAGATTCGGCTTCTACATTCGAAAGCAAGATCGGCGATAACACGGTTCCAGAACGACGATGAGGTATAATTTGGACCTGAACGAAGCTGATTCTGAACCCCGTCGATCTCTAACCCCAAAACTGGACGTCGATTGGGTTCCTCTCAAGACCCACCCCGTTTTCACCGCCGCCACTGCCGTCGACTATGGCGATTCTGTTTCTCCGCCTCTCAGAAGCCTTCTGGTCTCGGACGGCGCCTCTCGTCTCTACTTTTGGGACTCCACTAAACTTTGCTTGCACCGGATTTCCATCCGCCTCGGAGAACCCGAACCCACCTCCGTCCTCGCCGCTTCTCCTTCTAAAGTCGGTTCACTTCCCTCGTTTCTCTTTCTGAAGCAGATTTTGAGAGCTAATCCCTTTGTTCCGAACTGTTCTATGTTATGTTTTCCCCCATTTTTTCTAGTCATTCTTCATAATCTCAGTTGCTTTGAACAGGTGTTGCAACCAAATGTGCCACTCGACTTCATGGTGCATAAGATTTCCATCAATAAGAATGGATCGGCAATAGCCCTTGTGGGTCCAGGCGGGTTGTGGATAATGTACCTCTATGGTCACAGTTCGACCAGAGATAGTAGCACTGTCATCTGTAGGTGAGGAGGAGCCACTGCCTTAGTTAATTTAAGTTTTTTCTTATATGTTGTTGTTTTCTTATGTTAAGCTTCAAAGATTCATACGTCTTGTTCTTATGTTTCCCATTTTATGTAAAAGGATGTCATAACACGTTTTCCACCAAGTTCTTTCTTAAAGAATCTGTCAATTGCTTACAGGACTGTTAGAGTTGGTCCACAAATCTACTATGGTGACCATGATGTCATACGCACGCTTCAAGTTTCTTGGCACCCATATAGTAACTTCCATCTTGGAGTCCTTTCATCTGATTCTGTTTTCAGGTACTAAATTTCCTGAATAAAGACATTTTATGCATATTTCATGAAGGAAATGCTTATATCTACTGCAATTTCGTTTTGAATACTTATTTAGACATTTTATGGGCCTTACAAGTGAACTTGAGTATAATCATCGAGGCTTAGGGGTAGGTTTTCAACATATTGTAGCTTTTTAAAGGTTTGGAGTCATGCTTTGCTACTTGAGTTCTTGTTGTTATTCCTGTCAAATATTTCAATATGTGGATTCAACCAATGTCCTTATAATGTCATGTTTAATGCCAAAGACCCAAATATAACCTTTGTGAAAAATTTAGGATGAAATGTAGTTCTTGAAAGTATGAGAAACAAAGTAAAATAAGTGTAAAATGCATGGACTAAATTTTGATCAGGTTTTTTGGTGAGACTCAATTTATTTATGAGTGGATCAGTAAACAAAGGGAGATTTGAGAACCCCCCAACCCTCCCAAGACACTCAAAGCACGAGTCTTTCTATCGATACTAAAAATATACCTCCTTTCTTTGCTGAAGGTTCCCTTAAAACCCAAGAAAAACTCACCTCACAACTCTCCTTTGAACTAAAAATATTCTTTGGGCTCCACAAAACTACGAAGGCACATACCTATCCCCTATTCGTTACATGGCTCTCCCCTTCCCGCTTTCTTACGTTTATAGAACTTGATAGTATGGGGTGTGTAAATCCTTTTGAGACTAACTTAAACTCATATTCATGTTGCTTTATGGACTAGGTTTCAACTTATGCATCCGTATGGGGAATGATTCATTTTTCAGCTATTTTTATTTCAGAGTTATTGATGGTTTCTCTTGGCTCCTCTTTCTCTTATTGTCTCCGTCTCAGAATCACCATCAGCATTGACAAAATCTTGTTACTGCTAGTCTATTGGGAATGGAGTGTAGAATTTTTGTTTGTTATTCACCTTTTCCGATTGTGGCTTAAGAACAGTTCACTGATCACCTGTCCTGAATGGACTCCCTTTTTCTCGTTCAAGATTGCATTCAGAAAACTATATGTAGCTTGTTGCAAATAATTAAGTATAAGATTCCTCTTTGTAGAGATGGTGCTGATATTTCAAAATATGAAGTTTGTCTATGTTTGCTCCAACATGCGTGATTGATTACCCATAAAAATCAAATTCCTTCTAAATGTTGCCATTGCAACCTAGTGTTTCCTGAACATCTGATCTGGGGTGGCTTATTGTTCAACTCCTTTTCCTTTCAGGCTTTTCAATTTGTCTTCAGATGGTGTGCAACCAGAGCAAGAATATTATCTACAGCCAGTGGAACCTGGTCAATCTAAAAATGCCTCGTCAATCTGCCCTGTTGATTTTTCATTTGGGGGAGATCACTTGTGGGATAAGTTCAGTGTAAGAACATTCATTGGAAATTTGTCATCTCAAATTTGGATAATTTAATATTTTTTCTTTATAATGATGAAAACTTATCTCATTGGCTTTCCGTTTTATCTTGCCCAGATATTTACTTTGAGCATTCTAATTTTTTTATGAATGATTAATTCGATGTTCTGTCAACACATAAATAAAAAATTCAACCTGTTCTTATGACTTTTTTTGCAATCTCCTCCACTAACTTTCTATGTTCTGTCCATTTGGTGCTCCACTATGCCTTTAGAATCGGTAATCTCAAGCCAAATTAAATTTTTATAACTTGCTATGCATTAAAATGTATGCATTCAGGATATTTCAGTAAACTTCTCAATGTATAGGATCTTAAATCTGATGTTAGTTCTACTTCTCAATGCATGAAAAACTGTTGCTTTCTTCTTTATACCATGGCGAGTGGCTAAGATTCATCCCTTAAACAGTTTAAGGACCACCATTACAATTTAAAAAATCCACTCACGCACTATACCTGCAGGTGTTCATTTTATTCAGTGATGGTTCAATTTACATCCTCTGCCCTGTTGTTCCATTTAGAAGGTACTCAATTTCTCACATCTATCCTTTAAATGACTATTGGATATCAAGAACATCAATTACAATTACCGAAGACAGACACTTATTTGTTTCTCGTTCTTCACATATTTAGTTGTGTAAAATATGTCAAGATGATATTCAGAGGGGATGCTTTCCCCCATCTTCTATCATGAAATCATAAATGATGAGTCAAGTTTCCACTTTTGAACTACAAGAAAATCTTGTGTCTGACTAGTGCCTTATGGTTTCTAAGTCGATTAATGGATAGAACTATATATATTACTATCTCTAAGTCCGTGCTTTGTCCTTGACAGCACTTACAAGTGTGAATCTATATTGGAGATTTATAATGATGCTCAGTCCTTTGGGTTAAAATCAGCCAATCCAACAGCTGTCAGTAATTCCAGTCTTGCAATCTCTTGGTTGGAAGAAACTTTTCCAAACTTAGTTCAAGCAACAGATGGAGGAGATATGACTGTGATAGTAGCCCATCCTTGTGCTTTATTTGATGCGTCACTTGCATTGCAGGTATGAGACATTTTCAATGGATGCATTTGGTGGTTGGCAATGTCCCTAGATTATATATATCTATATATCTATGTGTGTGTGTGTTATTATCAAATTTTTAGTGGTATGGCATGTGCATGGGTTGTAGTATACTCTTAGTTCTGGATTTAGTGGAATCCTTAATCTTCATATGACATGGTCTTCCAGGGGCCTTTGAGGAGAGCGTGTAATAATGGAAATGAAGGAGATATATCAATTAAAGGTGCAGAATGTGAAGGTCGTGCAGTAAGTTTACTATATAAGCTAATCAGCAAAGACTCAGTTCTTGTGACAGCGTGGAGTGGTGGGCAACTGCAGATAGACGCCCTTGCGGATGAAATTCAACCTGTCTGGAATCTTGGTAGTCCCCCACGTGTACATGTTGATCCGAACGACAATATTCTTGGACATGCTATGATATGTGAACTGATCACAGGGAAGCTCTCCGAGGTGAAGCTTGATCAACCACTTGATTACACAGTTTGGTTGGGGCTCCCTCCCCCTTTGCTGAGACTGGCTATTGTAGATCTGGCCCTTCCAAAGAAGATGGAGAGATGTTCTCTTATAATGATGTTTGTCGATAAACTTATGGATGAAAGAATTTATGCTCTTCATAATGGAGGTATAGACTCAATTATATTGCATTTTCTCCCATTCACAAGTCAAAGCAGAGGACAGGACCAGACTATGAGAACTCCCTCTGTTCATCCTGTTCTGAATACCTGCCAGGGAGACACTTCCAACCCATTTCCGCTTTGTGGTTTCGCCTCATTATCCGATTCATTTGGATATTCTTGGATTGTGGGAGTCACCATTTCTCAGGAATGTATTGTTCTAGAAATGAAGACTTGGAACCTTCAAGTCCCAGTTCAGTTTAGCAATTTCCTAAATGAGGGGAAATTAGCTGCCACAGCGACAGGAGAGAAGAACGAAAGTGAAAGATCCGAAATTATAAGCAAAAATCTTCTCAGCGGACCTAAGGTGGTTCTCCTTCCTCAATCCTCATCAAATATGCGTTCTGTGACTGCTGATTCGATTGAAGGTCGGTCCATGCTTCATCAGTATTTCAAGCTCTTCCATGAAAATTATGTGGAGTATGCACACACGGTAATTGCAAATTTACTGCAGAACTATTAAGTGTTTTGTCAACTACTTCAGATAATTTAGATAGTTCAGCGCTGTGTGTAATATCTAAATTTCTCCTTCCTTCTTACCTTCTACCTCCTGTAGGTATACTATGAGCTCAAGCAGCATGGCCCCGAGTTGAAGAGGTTAATTGACGATCAGCAAACTCGTTTAAGAGAGGCACAACAAAAGCTCTTAAAAGTAGGAGGGAAACAGGAACTATTGGAGGACAGGATAGAAAGTGCAATCAAACTGCACAATGTTCTGGAAGAACGGATACATCGGTTGAAGAACTTGCCAGGAGCTCACAAAAGGCCATTGTCCAAAGCAGAAAGAGAGTTCAAATCTACACTTGGTAATAAATTCTCAGCCACGATACTTGAATTTGTTTGCTTGCTTATGACTAATTAAAATTAATTTCATTTGATATTTGAAAGGGTGAAAAGTGTTCCTTAGCCTATTAAATTACTTATCTAAAACTGTTTGGTTACTTAGTTGCATGTATAGAAGAAATGGGTTTAAATGCATTATGAACTTCGAACTTTTAGATTTGCCTGAAAATGAAGCAACCCAAATATGGAGTTGAGTTCATAAATTTCATATTATAACAAAATAATACTTTGTTGCCATCCAGACCACTTTACAGGTGTGGAGGTGGATGCTTTGCATACTTCAATCGATACACTAACTGCAAGACTAAGGAGGTACACCAATTCTTCAAAGAACAACAATCTAGTAAACCAACAGCACAAAATTCACAGGAGAAACACCTGTGTTCAAGGCTCTCAGATCTCCCAACTCAAATCGTCGCTTGAGAAACTCTCCCTTCTCAATGCCGAGAATGCCAAAAAGGTTAAACTAGTTGAATCTACAATCAAAAGCAAGGAAGCGAACCGATGCTGATATCTTATCTGTATTTGAGTATGTGCAATGCAATTGCAATTGTTGTCTGACTGACTTTCTGTAAAGAAGCCTAACCCCACATACTGCACATATTCAACTCAAATCCTCTGAATTTTGAAGCCAGGAGATCATCTGACCAGAAGATATGTGGGTAGAAGGCAGTGTTTGATTTTGATTGGCTAGAAAATTGGTGCTCTTGGGAAGTGGCCGCCGAGAGAAGTGATTCATTGGCTGGCTGTACTGTTGAGTAGTAGCTTCATATTGTGTGTACTAAAACTCATTAATTTAGCATATAATCTTATTCATACAAGATCAATAGAGAGATAGATTGAAACCCCAAGTCATAGATGAGTGTCTTTACATTGTGTTGTTTCGTCCTTACGGGTGACGTAGATAGGATAGCGTTTCTGTGTTCTTGTAGTTGGGAAAAACACCAACTTATCATCTTCTGCTGGAACCCATCTGAAAATCATAGATCTTTAGTAGAGTTGCTTCCATATTTCAAACTTTGTTCGAGACATTACTAATACCTGAATTGCGTAACAAGATGATGAAGGAAAACAGAGAGTTCTACTCTGGCAAGCTCGTAACCCGGGCATAACCTCGGACCTCCTCCGAATGGTGTAAATGCATTTGTGGTTGACCCCAAGCTGTTCTGCTCGGTTGCAGAGATAAAAGTTAGGAATGGTAAAGTATTGAGAGGATTGAGATTTGACAGATTGTACCTGTTGCTGCCATCTCCATGGGTTGAAGGAGCGAGCATCGTCGAAATGATGATGGTTCATATGAACTGCACGAAACGATGCAAAAACCCTGCATCCCTTTGGAATTGTATAACCACCTGAATCAATCAATGTTGTATTGTTACATAGGTTTGATTAATATAATAACGATCGAAGAATTAGCTTCTTGTAGTGAGTTACCTTTGATATTCACATCTGTGACAGCTCTCCTAAAAACTCC

mRNA sequence

TTATAAAAAAATAATGTTTCTAAGATTTTGAAATTTTAAAAATGTAAAATTTTCAAAATTTAATGACTAATTTAAAGAAGGTATCAAAGCTAAGCTACTGCGCCTCTAACTTCAACAATAGATTCGGCTTCTACATTCGAAAGCAAGATCGGCGATAACACGGTTCCAGAACGACGATGAGGTATAATTTGGACCTGAACGAAGCTGATTCTGAACCCCGTCGATCTCTAACCCCAAAACTGGACGTCGATTGGGTTCCTCTCAAGACCCACCCCGTTTTCACCGCCGCCACTGCCGTCGACTATGGCGATTCTGTTTCTCCGCCTCTCAGAAGCCTTCTGGTCTCGGACGGCGCCTCTCGTCTCTACTTTTGGGACTCCACTAAACTTTGCTTGCACCGGATTTCCATCCGCCTCGGAGAACCCGAACCCACCTCCGTCCTCGCCGCTTCTCCTTCTAAAGTGTTGCAACCAAATGTGCCACTCGACTTCATGGTGCATAAGATTTCCATCAATAAGAATGGATCGGCAATAGCCCTTGTGGGTCCAGGCGGGTTGTGGATAATGTACCTCTATGGTCACAGTTCGACCAGAGATAGTAGCACTGTCATCTGTAGGACTGTTAGAGTTGGTCCACAAATCTACTATGGTGACCATGATGTCATACGCACGCTTCAAGTTTCTTGGCACCCATATAGTAACTTCCATCTTGGAGTCCTTTCATCTGATTCTGTTTTCAGGCTTTTCAATTTGTCTTCAGATGGTGTGCAACCAGAGCAAGAATATTATCTACAGCCAGTGGAACCTGGTCAATCTAAAAATGCCTCGTCAATCTGCCCTGTTGATTTTTCATTTGGGGGAGATCACTTGTGGGATAAGTTCAGTGTGTTCATTTTATTCAGTGATGGTTCAATTTACATCCTCTGCCCTGTTGTTCCATTTAGAAGCACTTACAAGTGTGAATCTATATTGGAGATTTATAATGATGCTCAGTCCTTTGGGTTAAAATCAGCCAATCCAACAGCTGTCAGTAATTCCAGTCTTGCAATCTCTTGGTTGGAAGAAACTTTTCCAAACTTAGTTCAAGCAACAGATGGAGGAGATATGACTGTGATAGTAGCCCATCCTTGTGCTTTATTTGATGCGTCACTTGCATTGCAGGGGCCTTTGAGGAGAGCGTGTAATAATGGAAATGAAGGAGATATATCAATTAAAGGTGCAGAATGTGAAGGTCGTGCAGTAAGTTTACTATATAAGCTAATCAGCAAAGACTCAGTTCTTGTGACAGCGTGGAGTGGTGGGCAACTGCAGATAGACGCCCTTGCGGATGAAATTCAACCTGTCTGGAATCTTGGTAGTCCCCCACGTGTACATGTTGATCCGAACGACAATATTCTTGGACATGCTATGATATGTGAACTGATCACAGGGAAGCTCTCCGAGGTGAAGCTTGATCAACCACTTGATTACACAGTTTGGTTGGGGCTCCCTCCCCCTTTGCTGAGACTGGCTATTGTAGATCTGGCCCTTCCAAAGAAGATGGAGAGATGTTCTCTTATAATGATGTTTGTCGATAAACTTATGGATGAAAGAATTTATGCTCTTCATAATGGAGGTATAGACTCAATTATATTGCATTTTCTCCCATTCACAAGTCAAAGCAGAGGACAGGACCAGACTATGAGAACTCCCTCTGTTCATCCTGTTCTGAATACCTGCCAGGGAGACACTTCCAACCCATTTCCGCTTTGTGGTTTCGCCTCATTATCCGATTCATTTGGATATTCTTGGATTGTGGGAGTCACCATTTCTCAGGAATGTATTGTTCTAGAAATGAAGACTTGGAACCTTCAAGTCCCAGTTCAGTTTAGCAATTTCCTAAATGAGGGGAAATTAGCTGCCACAGCGACAGGAGAGAAGAACGAAAGTGAAAGATCCGAAATTATAAGCAAAAATCTTCTCAGCGGACCTAAGGTGGTTCTCCTTCCTCAATCCTCATCAAATATGCGTTCTGTGACTGCTGATTCGATTGAAGGTCGGTCCATGCTTCATCAGTATTTCAAGCTCTTCCATGAAAATTATGTGGAGTATGCACACACGGTATACTATGAGCTCAAGCAGCATGGCCCCGAGTTGAAGAGGTTAATTGACGATCAGCAAACTCGTTTAAGAGAGGCACAACAAAAGCTCTTAAAAGTAGGAGGGAAACAGGAACTATTGGAGGACAGGATAGAAAGTGCAATCAAACTGCACAATGTTCTGGAAGAACGGATACATCGGTTGAAGAACTTGCCAGGAGCTCACAAAAGGCCATTGTCCAAAGCAGAAAGAGAGTTCAAATCTACACTTGACCACTTTACAGGTGTGGAGGTGGATGCTTTGCATACTTCAATCGATACACTAACTGCAAGACTAAGGAGGTACACCAATTCTTCAAAGAACAACAATCTAGTAAACCAACAGCACAAAATTCACAGGAGAAACACCTGTGTTCAAGGCTCTCAGATCTCCCAACTCAAATCGTCGCTTGAGAAACTCTCCCTTCTCAATGCCGAGAATGCCAAAAAGGTTAAACTAGTTGAATCTACAATCAAAAGCAAGGAAGCGAACCGATGCTGATATCTTATCTGTATTTGAGTATGTGCAATGCAATTGCAATTGTTGTCTGACTGACTTTCTGTAAAGAAGCCTAACCCCACATACTGCACATATTCAACTCAAATCCTCTGAATTTTGAAGCCAGGAGATCATCTGACCAGAAGATATGTGGGTAGAAGGCAGTGTTTGATTTTGATTGGCTAGAAAATTGGTGCTCTTGGGAAGTGGCCGCCGAGAGAAGTGATTCATTGGCTGGCTGTACTGTTGAGTAGTAGCTTCATATTGTGTGTACTAAAACTCATTAATTTAGCATATAATCTTATTCATACAAGATCAATAGAGAGATAGATTGAAACCCCAAGTCATAGATGAGTGTCTTTACATTGTGTTGTTTCGTCCTTACGGGTGACGTAGATAGGATAGCGTTTCTGTGTTCTTGTAGTTGGGAAAAACACCAACTTATCATCTTCTGCTGGAACCCATCTGAAAATCATAGATCTTTAGTAGAGTTGCTTCCATATTTCAAACTTTGTTCGAGACATTACTAATACCTGAATTGCGTAACAAGATGATGAAGGAAAACAGAGAGTTCTACTCTGGCAAGCTCGTAACCCGGGCATAACCTCGGACCTCCTCCGAATGGTGTAAATGCATTTGTGGTTGACCCCAAGCTGTTCTGCTCGGTTGCAGAGATAAAAGTTAGGAATGGTAAAGTATTGAGAGGATTGAGATTTGACAGATTGTACCTGTTGCTGCCATCTCCATGGGTTGAAGGAGCGAGCATCGTCGAAATGATGATGGTTCATATGAACTGCACGAAACGATGCAAAAACCCTGCATCCCTTTGGAATTGTATAACCACCTGAATCAATCAATGTTGTATTGTTACATAGGTTTGATTAATATAATAACGATCGAAGAATTAGCTTCTTGTAGTGAGTTACCTTTGATATTCACATCTGTGACAGCTCTCCTAAAAACTCC

Coding sequence (CDS)

ATGAGGTATAATTTGGACCTGAACGAAGCTGATTCTGAACCCCGTCGATCTCTAACCCCAAAACTGGACGTCGATTGGGTTCCTCTCAAGACCCACCCCGTTTTCACCGCCGCCACTGCCGTCGACTATGGCGATTCTGTTTCTCCGCCTCTCAGAAGCCTTCTGGTCTCGGACGGCGCCTCTCGTCTCTACTTTTGGGACTCCACTAAACTTTGCTTGCACCGGATTTCCATCCGCCTCGGAGAACCCGAACCCACCTCCGTCCTCGCCGCTTCTCCTTCTAAAGTGTTGCAACCAAATGTGCCACTCGACTTCATGGTGCATAAGATTTCCATCAATAAGAATGGATCGGCAATAGCCCTTGTGGGTCCAGGCGGGTTGTGGATAATGTACCTCTATGGTCACAGTTCGACCAGAGATAGTAGCACTGTCATCTGTAGGACTGTTAGAGTTGGTCCACAAATCTACTATGGTGACCATGATGTCATACGCACGCTTCAAGTTTCTTGGCACCCATATAGTAACTTCCATCTTGGAGTCCTTTCATCTGATTCTGTTTTCAGGCTTTTCAATTTGTCTTCAGATGGTGTGCAACCAGAGCAAGAATATTATCTACAGCCAGTGGAACCTGGTCAATCTAAAAATGCCTCGTCAATCTGCCCTGTTGATTTTTCATTTGGGGGAGATCACTTGTGGGATAAGTTCAGTGTGTTCATTTTATTCAGTGATGGTTCAATTTACATCCTCTGCCCTGTTGTTCCATTTAGAAGCACTTACAAGTGTGAATCTATATTGGAGATTTATAATGATGCTCAGTCCTTTGGGTTAAAATCAGCCAATCCAACAGCTGTCAGTAATTCCAGTCTTGCAATCTCTTGGTTGGAAGAAACTTTTCCAAACTTAGTTCAAGCAACAGATGGAGGAGATATGACTGTGATAGTAGCCCATCCTTGTGCTTTATTTGATGCGTCACTTGCATTGCAGGGGCCTTTGAGGAGAGCGTGTAATAATGGAAATGAAGGAGATATATCAATTAAAGGTGCAGAATGTGAAGGTCGTGCAGTAAGTTTACTATATAAGCTAATCAGCAAAGACTCAGTTCTTGTGACAGCGTGGAGTGGTGGGCAACTGCAGATAGACGCCCTTGCGGATGAAATTCAACCTGTCTGGAATCTTGGTAGTCCCCCACGTGTACATGTTGATCCGAACGACAATATTCTTGGACATGCTATGATATGTGAACTGATCACAGGGAAGCTCTCCGAGGTGAAGCTTGATCAACCACTTGATTACACAGTTTGGTTGGGGCTCCCTCCCCCTTTGCTGAGACTGGCTATTGTAGATCTGGCCCTTCCAAAGAAGATGGAGAGATGTTCTCTTATAATGATGTTTGTCGATAAACTTATGGATGAAAGAATTTATGCTCTTCATAATGGAGGTATAGACTCAATTATATTGCATTTTCTCCCATTCACAAGTCAAAGCAGAGGACAGGACCAGACTATGAGAACTCCCTCTGTTCATCCTGTTCTGAATACCTGCCAGGGAGACACTTCCAACCCATTTCCGCTTTGTGGTTTCGCCTCATTATCCGATTCATTTGGATATTCTTGGATTGTGGGAGTCACCATTTCTCAGGAATGTATTGTTCTAGAAATGAAGACTTGGAACCTTCAAGTCCCAGTTCAGTTTAGCAATTTCCTAAATGAGGGGAAATTAGCTGCCACAGCGACAGGAGAGAAGAACGAAAGTGAAAGATCCGAAATTATAAGCAAAAATCTTCTCAGCGGACCTAAGGTGGTTCTCCTTCCTCAATCCTCATCAAATATGCGTTCTGTGACTGCTGATTCGATTGAAGGTCGGTCCATGCTTCATCAGTATTTCAAGCTCTTCCATGAAAATTATGTGGAGTATGCACACACGGTATACTATGAGCTCAAGCAGCATGGCCCCGAGTTGAAGAGGTTAATTGACGATCAGCAAACTCGTTTAAGAGAGGCACAACAAAAGCTCTTAAAAGTAGGAGGGAAACAGGAACTATTGGAGGACAGGATAGAAAGTGCAATCAAACTGCACAATGTTCTGGAAGAACGGATACATCGGTTGAAGAACTTGCCAGGAGCTCACAAAAGGCCATTGTCCAAAGCAGAAAGAGAGTTCAAATCTACACTTGACCACTTTACAGGTGTGGAGGTGGATGCTTTGCATACTTCAATCGATACACTAACTGCAAGACTAAGGAGGTACACCAATTCTTCAAAGAACAACAATCTAGTAAACCAACAGCACAAAATTCACAGGAGAAACACCTGTGTTCAAGGCTCTCAGATCTCCCAACTCAAATCGTCGCTTGAGAAACTCTCCCTTCTCAATGCCGAGAATGCCAAAAAGGTTAAACTAGTTGAATCTACAATCAAAAGCAAGGAAGCGAACCGATGCTGA

Protein sequence

MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINKNGSAIALVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGVLSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFILFSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPNLVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYKLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKLSEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGGIDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIVGVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPKVVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQQTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREFKSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQLKSSLEKLSLLNAENAKKVKLVESTIKSKEANRC
Homology
[Close]
BLAST of CmaCh04G001580 vs. ExPASy Swiss-Prot
Match: Q9FFK6 (Nuclear pore complex protein NUP88 OS=Arabidopsis thaliana OX=3702 GN=NUP88 PE=1 SV=1)

HSP 1 Score: 895.2 bits (2312), Expect = 5.5e-259
Identity = 461/814 (56.63%), Postives = 597/814 (73.34%), Query Frame = 0 

Query: 1   MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYGDSVSPPL-RSLLVSDG 60
           M++N +  E   + RRS TPK  V WVPL++HPVF +  +     +VS    R+ +  DG
Sbjct: 1   MKFNFNETEDAPDSRRSPTPKEPVRWVPLQSHPVFASLPSSQDEPAVSQLFPRNFMAWDG 60

Query: 61  ASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINKNGSAI 120
            SR+Y+WDS +  LHR+S+RLGEPEP+SVLAA PSKV+QP++ + F V KISINK+GSA+
Sbjct: 61  DSRVYYWDSRRYLLHRLSLRLGEPEPSSVLAAVPSKVMQPDLQVTFSVSKISINKSGSAV 120

Query: 121 ALVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLG 180
            L G  G+ +MYL+G +S  + + VICR V +G +IY      I  LQ SWHP S+ HLG
Sbjct: 121 LLAGSDGICVMYLFGRASVIEDN-VICRVVSIGSEIYTSSDSAITLLQASWHPDSDTHLG 180

Query: 181 VLSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFI 240
           +LSSD+VFRLF+LSSD   PEQEYYLQP EPG+S+ ASSI P DFSFGGDHLWD+F+VFI
Sbjct: 181 ILSSDAVFRLFDLSSDTELPEQEYYLQPGEPGRSRTASSIYPADFSFGGDHLWDRFTVFI 240

Query: 241 LFSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFP 300
           LF+DGSIYILCPVVPF S YK ES++EIYNDA  +G+KS+N  AVSNSSLAI WLE TFP
Sbjct: 241 LFTDGSIYILCPVVPFGSVYKWESVMEIYNDANMYGVKSSNSLAVSNSSLAIEWLEATFP 300

Query: 301 NLV-QATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLL 360
           +L  Q T G ++ V+ A P AL DASLALQGPL +A +   + D +++ AEC+GRAVSLL
Sbjct: 301 DLTEQGTRGENILVVKAQPYALLDASLALQGPLYKASSGDGDEDFAVREAECKGRAVSLL 360

Query: 361 YKLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITG 420
           Y L+SKDS+LVTAWS GQLQ+DAL DEIQPVW  G+  R+ ++ ++ I G AMICE    
Sbjct: 361 YNLVSKDSILVTAWSAGQLQVDALVDEIQPVWISGNSSRLRMNSHNKIQGVAMICESNIS 420

Query: 421 KLSEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHN 480
           +L     + PLD+TVWLG PPPLLRLA+VDLALPK  E  SL+ +F D L+ ERIY+LH+
Sbjct: 421 ELPVATSNLPLDHTVWLGHPPPLLRLAMVDLALPKMREGGSLVTLFADSLLPERIYSLHD 480

Query: 481 GGIDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSW 540
           GGIDS +LH LPFTSQ+ G+D+ ++TPSVH VL+TCQ + S   PL GF  LSDSFGYSW
Sbjct: 481 GGIDSTVLHSLPFTSQASGKDEALKTPSVHTVLSTCQ-EESAVSPLLGFVPLSDSFGYSW 540

Query: 541 IVGVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGP 600
           IV V  S ECIV EMKTW+L +P+  S      K  +++  EK E E S IISK LL+GP
Sbjct: 541 IVAVLSSGECIVAEMKTWDLLLPIHVST----DKTVSSSAIEKKEQENSCIISKELLAGP 600

Query: 601 KVVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLID 660
           K+ + P +  N RS  A+S+EGRS+L  Y KLFHENY+EYAH V++EL+ H P LKR+ID
Sbjct: 601 KIRIAPHALPNQRSTPANSVEGRSILLDYVKLFHENYIEYAHKVHFELQHHAPNLKRIID 660

Query: 661 DQQTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPLSKAER 720
           DQ  RL EA +K+ KV   Q  LE RI+ AI+ H+ LE+ + RL++LPG HK+PL++AE 
Sbjct: 661 DQHQRLAEANEKISKVEKNQSFLEKRIDKAIERHDSLEQCLQRLRSLPGTHKKPLTRAEL 720

Query: 721 EFKSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLV-NQQHKIHRRNTCVQGSQI 780
           +FKS LD + GVEVDAL +SI+TL AR+++ T  S    +V   Q K + +   +Q +Q+
Sbjct: 721 DFKSELDQYAGVEVDALQSSIETLRARVKKSTQKSHKGTVVAASQKKQYSKKNLIQDTQM 780

Query: 781 SQLKSSLEKLSLLNAENAKKVKLVESTIKSKEAN 812
           SQL+S+L KLSL+N++N+KKVK+VES +KS+E++
Sbjct: 781 SQLQSTLAKLSLMNSDNSKKVKIVESALKSQESS 808

[Close]
BLAST of CmaCh04G001580 vs. ExPASy Swiss-Prot
Match: Q9P382 (Nucleoporin nup82 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=nup82 PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 4.4e-06
Identity = 68/335 (20.30%), Postives = 124/335 (37.01%), Query Frame = 0 

Query: 100 NVPLDFMVHKISINKNGSAIALVGPGGLWIMYL--------------------------- 159
           N  LDFM+ +I ++KNG  +A+VG   + I+ L                           
Sbjct: 79  NPELDFMIEQICLSKNGRFLAVVGKSKIVILGLRSKLSEQNPLAESVSNFGESVNNFSNS 138

Query: 160 ----YGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPY--SNFHLGVLSSDSV 219
                G +S + S   IC    + P          + + V +HP   S   L VL+  S+
Sbjct: 139 EHQENGTNSLKLSEVTICSVAVINPS--------SQIVSVRFHPLGKSGRSLVVLTETSL 198

Query: 220 FRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSI---CPVDFSFGG-DHLWDKFSVFILFS 279
             L+   +  + P+ E  L+      +   + +    P  F F      W  F+++IL  
Sbjct: 199 L-LYEAGNGVLMPDYEIPLKLTHQASNSFDADVDLHIPTAFCFSNVSQGWGVFTIYILTR 258

Query: 280 DGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPNLV 339
            G ++ +CPV+P  +    + + +I    +    K  +     N    + W+ +      
Sbjct: 259 GGDVFSVCPVMPANAMIPQDVLKQI----RLILTKKEDDADAENHRRNVHWITKLLGEAA 318

Query: 340 QATDGGDMTVIVAHPCALFDAS--LALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 392
            A D     VI      LFD+S  ++++ P   +     +G   ++ A  +   +     
Sbjct: 319 LANDLSTSFVISEGSSELFDSSDYVSVRRPDDFSFIPSMQGPFLLQPAVADDELIEDYCD 378

[Close]
BLAST of CmaCh04G001580 vs. ExPASy TrEMBL
Match: A0A6J1JXJ0 (nuclear pore complex protein NUP88-like OS=Cucurbita maxima OX=3661 GN=LOC111490688 PE=4 SV=1)

HSP 1 Score: 1627.5 bits (4213), Expect = 0.0e+00
Identity = 813/813 (100.00%), Postives = 813/813 (100.00%), Query Frame = 0 

Query: 1   MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60
           MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA
Sbjct: 1   MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60

Query: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINKNGSAIA 120
           SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINKNGSAIA
Sbjct: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINKNGSAIA 120

Query: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180
           LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV
Sbjct: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180

Query: 181 LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFIL 240
           LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFIL
Sbjct: 181 LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFIL 240

Query: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300
           FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN
Sbjct: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 301 LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360
           LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK
Sbjct: 301 LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360

Query: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL 420
           LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL
Sbjct: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL 420

Query: 421 SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480
           SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG
Sbjct: 421 SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480

Query: 481 IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540
           IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV
Sbjct: 481 IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 541 GVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPKV 600
           GVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPKV
Sbjct: 541 GVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPKV 600

Query: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660
           VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ
Sbjct: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660

Query: 661 QTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720
           QTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF
Sbjct: 661 QTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720

Query: 721 KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 780
           KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL
Sbjct: 721 KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 780

Query: 781 KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 814
           KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC
Sbjct: 781 KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 813

[Close]
BLAST of CmaCh04G001580 vs. ExPASy TrEMBL
Match: A0A6J1FTH0 (nuclear pore complex protein NUP88-like OS=Cucurbita moschata OX=3662 GN=LOC111447977 PE=4 SV=1)

HSP 1 Score: 1606.3 bits (4158), Expect = 0.0e+00
Identity = 802/813 (98.65%), Postives = 807/813 (99.26%), Query Frame = 0 

Query: 1   MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60
           MRYNLDLNEADSEPRRSLTPK DVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA
Sbjct: 1   MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60

Query: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINKNGSAIA 120
           SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQP+VPLDF+VHKISINKNGSAIA
Sbjct: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA 120

Query: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180
           LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV
Sbjct: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180

Query: 181 LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFIL 240
           LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVF+L
Sbjct: 181 LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL 240

Query: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300
           FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN
Sbjct: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 301 LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360
           LVQAT GGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK
Sbjct: 301 LVQATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360

Query: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL 420
           LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICE ITGKL
Sbjct: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITGKL 420

Query: 421 SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480
           SEVKLDQPLDYTVW+GLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG
Sbjct: 421 SEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480

Query: 481 IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540
           IDSIILHFLPFTSQSRGQDQTM+TPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV
Sbjct: 481 IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 541 GVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPKV 600
           GVTISQECIVLEMKTWNLQVPVQFSNFLNE KLAATATGEKNESERSEIISKNLLSGPKV
Sbjct: 541 GVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGPKV 600

Query: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660
           VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ
Sbjct: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660

Query: 661 QTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720
           QTRLREAQQKLLKV GKQELLEDRIE AIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF
Sbjct: 661 QTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720

Query: 721 KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 780
           KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL
Sbjct: 721 KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 780

Query: 781 KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 814
           KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC
Sbjct: 781 KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 813

[Close]
BLAST of CmaCh04G001580 vs. ExPASy TrEMBL
Match: A0A6J1GXA7 (nuclear pore complex protein NUP88-like OS=Cucurbita moschata OX=3662 GN=LOC111458346 PE=4 SV=1)

HSP 1 Score: 1422.9 bits (3682), Expect = 0.0e+00
Identity = 719/813 (88.44%), Postives = 759/813 (93.36%), Query Frame = 0 

Query: 1   MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60
           MRYN DLNEADS+PRRSL PKLDVDWVPL THPVFT  +AVDYG S +PPLR+LL  DGA
Sbjct: 1   MRYNFDLNEADSDPRRSLIPKLDVDWVPLTTHPVFT-PSAVDYGGSAAPPLRNLLAWDGA 60

Query: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINKNGSAIA 120
           SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQP+V LDF+VHKISINKNGSA+A
Sbjct: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVQLDFVVHKISINKNGSALA 120

Query: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180
           LVGPGGL IM+LYGHSSTRD++T+ICRTVRVGPQIYYG HDVIRTLQVSWHPYSNFHLG+
Sbjct: 121 LVGPGGLCIMHLYGHSSTRDNNTIICRTVRVGPQIYYGGHDVIRTLQVSWHPYSNFHLGI 180

Query: 181 LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFIL 240
           LSSDSVFRLFNLSSD VQPEQEYY+QPVEPGQS NA+SICPV FSFGGDHLWDKFSVF+L
Sbjct: 181 LSSDSVFRLFNLSSDIVQPEQEYYIQPVEPGQSNNATSICPVGFSFGGDHLWDKFSVFVL 240

Query: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300
           FSDGSIYILCPVVPF+S Y  ESILEIYNDAQS GLKSANPTAVSNSSLAISWLEETFPN
Sbjct: 241 FSDGSIYILCPVVPFKSVYVWESILEIYNDAQSSGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 301 LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360
           LV+A DGGDM+VIVAHPCALFDAS+ALQGPL RACNNGNE DISIKGAECEG AVSLLY 
Sbjct: 301 LVRAPDGGDMSVIVAHPCALFDASIALQGPLWRACNNGNEEDISIKGAECEGGAVSLLYN 360

Query: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL 420
           LISKDSVLVTAWSGGQLQIDALADE+QPVWN+GS PRV VDPNDNILG  MICELITGKL
Sbjct: 361 LISKDSVLVTAWSGGQLQIDALADEVQPVWNVGSSPRVRVDPNDNILGLGMICELITGKL 420

Query: 421 SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480
           S+VKLDQPLD+TVWLGLPPPLLRLAIVDLALPKKMER SLI MFVDKLMD+RI+ALHNGG
Sbjct: 421 SKVKLDQPLDHTVWLGLPPPLLRLAIVDLALPKKMERDSLITMFVDKLMDQRIFALHNGG 480

Query: 481 IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNT-CQGDTSNPFPLCGFASLSDSFGYSWI 540
           IDSIILHFLPFTSQSRGQD  MRTPSVH VLNT CQGDTSNPFPLCGFASLSDSFGYSWI
Sbjct: 481 IDSIILHFLPFTSQSRGQDPIMRTPSVHSVLNTCCQGDTSNPFPLCGFASLSDSFGYSWI 540

Query: 541 VGVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPK 600
           VGVT SQECIVLEMKTWNL VPVQ SNFLNEG+ AA  TGEK+ESERSEIISK+LL GPK
Sbjct: 541 VGVTFSQECIVLEMKTWNLLVPVQVSNFLNEGQSAAAVTGEKSESERSEIISKDLLGGPK 600

Query: 601 VVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDD 660
           VVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAH+VYYELKQHGP LKRL DD
Sbjct: 601 VVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHSVYYELKQHGPRLKRLNDD 660

Query: 661 QQTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPLSKAERE 720
           QQTRLREAQQKLLKV GKQ++L+DRIESAIKLHNVLEERIHRLKNLPGAHK+PLSKAERE
Sbjct: 661 QQTRLREAQQKLLKVEGKQQVLDDRIESAIKLHNVLEERIHRLKNLPGAHKKPLSKAERE 720

Query: 721 FKSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNL-VNQQHKIHRRNTCVQGSQIS 780
           FKSTLDHFTGVE+DAL  S+DT+TARLRR+ NSSKNNN  VNQQ K++RR+T VQGSQIS
Sbjct: 721 FKSTLDHFTGVELDALRISMDTVTARLRRFKNSSKNNNNGVNQQQKMYRRSTYVQGSQIS 780

Query: 781 QLKSSLEKLSLLNAENAKKVKLVESTIKSKEAN 812
           QLKSSLEKLSLLNAEN KKVKLVES IKSKE N
Sbjct: 781 QLKSSLEKLSLLNAENTKKVKLVESAIKSKERN 812

[Close]
BLAST of CmaCh04G001580 vs. ExPASy TrEMBL
Match: A0A6J1J9F4 (nuclear pore complex protein NUP88-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484753 PE=4 SV=1)

HSP 1 Score: 1422.5 bits (3681), Expect = 0.0e+00
Identity = 719/813 (88.44%), Postives = 756/813 (92.99%), Query Frame = 0 

Query: 1   MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60
           MRYN DLNEADS+PRRS  PKLDVDWVPL THPVFT  +AVDYG S +PPLR+LL  DGA
Sbjct: 1   MRYNFDLNEADSDPRRSPIPKLDVDWVPLTTHPVFT-PSAVDYGGSAAPPLRNLLAWDGA 60

Query: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINKNGSAIA 120
           SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQP+V LDF+VHKISINKNGSA+A
Sbjct: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVQLDFVVHKISINKNGSALA 120

Query: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180
           LVGPGGL IM+LYGHSSTRD +TVICR VRVGPQIYYG HDVIR LQVSWHPYSNFHLG+
Sbjct: 121 LVGPGGLCIMHLYGHSSTRDDNTVICRIVRVGPQIYYGGHDVIRMLQVSWHPYSNFHLGI 180

Query: 181 LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFIL 240
           LSSDSVFRLFNLSSD VQPEQEYYLQPVEPGQS NA+SICPVDFSFGGDHLWDKFSVF+L
Sbjct: 181 LSSDSVFRLFNLSSDIVQPEQEYYLQPVEPGQSNNATSICPVDFSFGGDHLWDKFSVFVL 240

Query: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300
           FSDGSIYILCPVVPF+S Y  ESILEIYNDAQS GLKSANPTAVSNSSLAISWLEETFPN
Sbjct: 241 FSDGSIYILCPVVPFKSVYVWESILEIYNDAQSSGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 301 LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360
           LV+A DGGDM+VIV HPCALFDAS+ALQGPLRRACNNGNE DISIKGAECEG AVSLLY 
Sbjct: 301 LVRAPDGGDMSVIVTHPCALFDASIALQGPLRRACNNGNEEDISIKGAECEGGAVSLLYN 360

Query: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL 420
           LISKDSVLVTAWSGGQLQIDALADE+QPVWN+GSPPRV VDPNDNILG  MICELITGKL
Sbjct: 361 LISKDSVLVTAWSGGQLQIDALADEVQPVWNVGSPPRVRVDPNDNILGLGMICELITGKL 420

Query: 421 SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480
           S+VKLDQPLD+TVWLGLPPPLLRLAIVDLALPKKMER SLI MFVDKLMD+RI+ALHNGG
Sbjct: 421 SKVKLDQPLDHTVWLGLPPPLLRLAIVDLALPKKMERDSLITMFVDKLMDQRIFALHNGG 480

Query: 481 IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNT-CQGDTSNPFPLCGFASLSDSFGYSWI 540
           IDSIILHFLPFTSQSRGQD  MRTPSVHPVLNT CQGDTSNPFPLCGFASLSDSFGYSWI
Sbjct: 481 IDSIILHFLPFTSQSRGQDPNMRTPSVHPVLNTCCQGDTSNPFPLCGFASLSDSFGYSWI 540

Query: 541 VGVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPK 600
           VGVT SQECIVLEM+TWNL VPVQ SNFLNEG+ AA  TGEK+ESERSEIISK+LL GPK
Sbjct: 541 VGVTFSQECIVLEMRTWNLLVPVQVSNFLNEGQSAAAVTGEKSESERSEIISKDLLGGPK 600

Query: 601 VVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDD 660
           VVLLPQSSSNMRSVTADSIEG SMLHQYFKLFHENYVEYAH+VYYELKQHGP LKRL DD
Sbjct: 601 VVLLPQSSSNMRSVTADSIEGWSMLHQYFKLFHENYVEYAHSVYYELKQHGPRLKRLNDD 660

Query: 661 QQTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPLSKAERE 720
           QQTRLREAQQKLLKV GKQ+ L+DRIESAIKLHNVLEERIHRLKNLPGAHK+PLSKAERE
Sbjct: 661 QQTRLREAQQKLLKVEGKQQALDDRIESAIKLHNVLEERIHRLKNLPGAHKKPLSKAERE 720

Query: 721 FKSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNL-VNQQHKIHRRNTCVQGSQIS 780
           FKSTLDHFTGVE+DAL  S+DT+TARLRRY NSSKNNN  VNQQ K++RR+T VQGSQIS
Sbjct: 721 FKSTLDHFTGVELDALRISMDTVTARLRRYKNSSKNNNNGVNQQQKMYRRSTYVQGSQIS 780

Query: 781 QLKSSLEKLSLLNAENAKKVKLVESTIKSKEAN 812
           QLKSSLEKLSLLNA+N KKVKLVES IKSKE N
Sbjct: 781 QLKSSLEKLSLLNADNTKKVKLVESAIKSKERN 812

[Close]
BLAST of CmaCh04G001580 vs. ExPASy TrEMBL
Match: A0A5A7UW69 (Nuclear pore complex protein NUP88 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold126G00530 PE=4 SV=1)

HSP 1 Score: 1420.2 bits (3675), Expect = 0.0e+00
Identity = 716/820 (87.32%), Postives = 757/820 (92.32%), Query Frame = 0 

Query: 1   MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAV--------DYGDSVSPPLR 60
           MRYN DLNEADS+P RSLTPK DVDW+PLKTHPVFT A A         DYG SVSPPLR
Sbjct: 1   MRYNFDLNEADSDPPRSLTPKRDVDWLPLKTHPVFTPAAAASTSTSSVDDYGVSVSPPLR 60

Query: 61  SLLVSDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISI 120
           +LLVSDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLA+SPSKVLQP+V LDF+V KISI
Sbjct: 61  NLLVSDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLASSPSKVLQPDVQLDFVVQKISI 120

Query: 121 NKNGSAIALVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHP 180
           N+NGSA+ALVG GGL IMYLYGHSSTRD++TVICRTVRVGPQIY G HDVIRTLQVSWHP
Sbjct: 121 NQNGSALALVGSGGLCIMYLYGHSSTRDNNTVICRTVRVGPQIYCGGHDVIRTLQVSWHP 180

Query: 181 YSNFHLGVLSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLW 240
           YSNFHLGVLSSDSVFRLFNLS+D VQPEQEYYLQPVEPGQSKNA+SICPVDFSFG DHLW
Sbjct: 181 YSNFHLGVLSSDSVFRLFNLSTDIVQPEQEYYLQPVEPGQSKNATSICPVDFSFGEDHLW 240

Query: 241 DKFSVFILFSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAIS 300
           DKFSVF+LFSDGS+YILCPVVPFRS YKCESILEIYNDAQSFG KS NPTA+ NSSLAIS
Sbjct: 241 DKFSVFVLFSDGSVYILCPVVPFRSVYKCESILEIYNDAQSFGQKSPNPTAM-NSSLAIS 300

Query: 301 WLEETFPNLVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEG 360
           WLEETFPNLVQATDGGD  VIVA PCALFDASLALQGPLRRACNNG+EGDISIKGAECEG
Sbjct: 301 WLEETFPNLVQATDGGDAYVIVAQPCALFDASLALQGPLRRACNNGDEGDISIKGAECEG 360

Query: 361 RAVSLLYKLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMI 420
           RAVSLLY LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRV VDPNDNILG AMI
Sbjct: 361 RAVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVRVDPNDNILGLAMI 420

Query: 421 CELITGKLSEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDER 480
           CE++T KL+ VKLD+PLD+TVW GLPPPLLRLAIVDLALPKKME+ SLI MF DKLMD+R
Sbjct: 421 CEVVTRKLTNVKLDEPLDHTVWSGLPPPLLRLAIVDLALPKKMEKDSLITMFADKLMDQR 480

Query: 481 IYALHNGGIDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSNPFPLCGFASLSD 540
           IYALHNGGIDSIILHFLPFTSQSRGQ+QTMRTPSVHPVLNTCQGDTS+PFPLCGFASLSD
Sbjct: 481 IYALHNGGIDSIILHFLPFTSQSRGQNQTMRTPSVHPVLNTCQGDTSSPFPLCGFASLSD 540

Query: 541 SFGYSWIVGVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISK 600
           S GYSWI+GVTIS ECIVLEMKTWNL VPVQ SNF  EGK A  ATGEKNESER EIISK
Sbjct: 541 SLGYSWILGVTISHECIVLEMKTWNLLVPVQVSNFQYEGKSATAATGEKNESERPEIISK 600

Query: 601 NLLSGPKVVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPE 660
           +LL GPKVVLLPQ SS MRSVTADSIEGRSMLHQYFKLFHENYVEYAH VYYELKQH P+
Sbjct: 601 DLLGGPKVVLLPQPSSTMRSVTADSIEGRSMLHQYFKLFHENYVEYAHAVYYELKQHEPK 660

Query: 661 LKRLIDDQQTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRP 720
           LKRLI+DQQTRL+EAQQKL+KV GKQ+LL++RIE AIKLHNVLE RIHRLKNLPGAHK+P
Sbjct: 661 LKRLIEDQQTRLKEAQQKLIKVEGKQQLLDERIECAIKLHNVLENRIHRLKNLPGAHKKP 720

Query: 721 LSKAEREFKSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCV 780
           LSKAEREFKSTLDHFT VE+DALHTSIDTLTARLRR+TNSSKNNNLVNQQ K++RRNT +
Sbjct: 721 LSKAEREFKSTLDHFTDVELDALHTSIDTLTARLRRFTNSSKNNNLVNQQQKMYRRNTYI 780

Query: 781 QGSQISQLKSSLEKLSLLNAENAKKVKLVESTIKSKEANR 813
           QGSQISQLKSSLEKLSLLNAEN KKVKLVES I+SKE NR
Sbjct: 781 QGSQISQLKSSLEKLSLLNAENTKKVKLVESRIQSKERNR 819

[Close]
BLAST of CmaCh04G001580 vs. NCBI nr
Match: XP_022995007.1 (nuclear pore complex protein NUP88-like [Cucurbita maxima])

HSP 1 Score: 1627.5 bits (4213), Expect = 0.0e+00
Identity = 813/813 (100.00%), Postives = 813/813 (100.00%), Query Frame = 0 

Query: 1   MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60
           MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA
Sbjct: 1   MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60

Query: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINKNGSAIA 120
           SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINKNGSAIA
Sbjct: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINKNGSAIA 120

Query: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180
           LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV
Sbjct: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180

Query: 181 LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFIL 240
           LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFIL
Sbjct: 181 LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFIL 240

Query: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300
           FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN
Sbjct: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 301 LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360
           LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK
Sbjct: 301 LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360

Query: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL 420
           LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL
Sbjct: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL 420

Query: 421 SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480
           SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG
Sbjct: 421 SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480

Query: 481 IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540
           IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV
Sbjct: 481 IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 541 GVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPKV 600
           GVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPKV
Sbjct: 541 GVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPKV 600

Query: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660
           VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ
Sbjct: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660

Query: 661 QTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720
           QTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF
Sbjct: 661 QTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720

Query: 721 KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 780
           KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL
Sbjct: 721 KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 780

Query: 781 KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 814
           KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC
Sbjct: 781 KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 813

[Close]
BLAST of CmaCh04G001580 vs. NCBI nr
Match: KAG6600003.1 (Nuclear pore complex protein NUP88, partial [Cucurbita argyrosperma subsp. sororia] >KAG7030676.1 Nuclear pore complex protein NUP88 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1609.0 bits (4165), Expect = 0.0e+00
Identity = 803/813 (98.77%), Postives = 808/813 (99.38%), Query Frame = 0 

Query: 1   MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60
           MRYNLDLNEADSEPRRSLTPK DVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA
Sbjct: 1   MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60

Query: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINKNGSAIA 120
           SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQP+VPLDF+VHKISINKNGSAIA
Sbjct: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA 120

Query: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180
           LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV
Sbjct: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180

Query: 181 LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFIL 240
           LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVF+L
Sbjct: 181 LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL 240

Query: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300
           FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN
Sbjct: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 301 LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360
           LVQAT GGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK
Sbjct: 301 LVQATGGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360

Query: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL 420
           LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICE ITGKL
Sbjct: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITGKL 420

Query: 421 SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480
           SEVKLDQPLDYTVW+GLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG
Sbjct: 421 SEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480

Query: 481 IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540
           IDSIILHFLPFTSQSRGQDQTM+TPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV
Sbjct: 481 IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 541 GVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPKV 600
           GVTISQECIVLEMKTWNLQVPVQFSNFLNE KLAATATGEKNESERSEIISKNLLSGPKV
Sbjct: 541 GVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGPKV 600

Query: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660
           VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ
Sbjct: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660

Query: 661 QTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720
           QTRLREAQQKLLKVGGKQELLEDRIE AIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF
Sbjct: 661 QTRLREAQQKLLKVGGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720

Query: 721 KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 780
           KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL
Sbjct: 721 KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 780

Query: 781 KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 814
           KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC
Sbjct: 781 KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 813

[Close]
BLAST of CmaCh04G001580 vs. NCBI nr
Match: XP_023518771.1 (nuclear pore complex protein NUP88-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1607.8 bits (4162), Expect = 0.0e+00
Identity = 802/813 (98.65%), Postives = 809/813 (99.51%), Query Frame = 0 

Query: 1   MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60
           MRYN+DLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDY DSVSPPLRSLLVSDGA
Sbjct: 1   MRYNVDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYDDSVSPPLRSLLVSDGA 60

Query: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINKNGSAIA 120
           SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQP+VPLDF+VHKISINKNGSAIA
Sbjct: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA 120

Query: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180
           LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIY GDHDVIRTLQVSWHPYSNFHLGV
Sbjct: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYNGDHDVIRTLQVSWHPYSNFHLGV 180

Query: 181 LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFIL 240
           LSSDSVFRLFNLS+DGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVF+L
Sbjct: 181 LSSDSVFRLFNLSADGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL 240

Query: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300
           FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN
Sbjct: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 301 LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360
           LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK
Sbjct: 301 LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360

Query: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL 420
           LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL
Sbjct: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL 420

Query: 421 SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480
           SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG
Sbjct: 421 SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480

Query: 481 IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540
           IDSIILHFLPFTSQSRGQDQTM+TPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV
Sbjct: 481 IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 541 GVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPKV 600
           GVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPKV
Sbjct: 541 GVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPKV 600

Query: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660
           VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ
Sbjct: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660

Query: 661 QTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720
           Q RLREAQQKLLKVGGKQELLEDRIE AIKLHNVLEERI+RLKNLPGAHKRPLSKAEREF
Sbjct: 661 QARLREAQQKLLKVGGKQELLEDRIERAIKLHNVLEERIYRLKNLPGAHKRPLSKAEREF 720

Query: 721 KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 780
           KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL
Sbjct: 721 KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 780

Query: 781 KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 814
           KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC
Sbjct: 781 KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 813

[Close]
BLAST of CmaCh04G001580 vs. NCBI nr
Match: XP_022943164.1 (nuclear pore complex protein NUP88-like [Cucurbita moschata])

HSP 1 Score: 1606.3 bits (4158), Expect = 0.0e+00
Identity = 802/813 (98.65%), Postives = 807/813 (99.26%), Query Frame = 0 

Query: 1   MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60
           MRYNLDLNEADSEPRRSLTPK DVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA
Sbjct: 1   MRYNLDLNEADSEPRRSLTPKRDVDWVPLKTHPVFTAATAVDYGDSVSPPLRSLLVSDGA 60

Query: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINKNGSAIA 120
           SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQP+VPLDF+VHKISINKNGSAIA
Sbjct: 61  SRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPDVPLDFVVHKISINKNGSAIA 120

Query: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180
           LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV
Sbjct: 121 LVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLGV 180

Query: 181 LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFIL 240
           LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVF+L
Sbjct: 181 LSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFVL 240

Query: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300
           FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN
Sbjct: 241 FSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFPN 300

Query: 301 LVQATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360
           LVQAT GGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK
Sbjct: 301 LVQATSGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLLYK 360

Query: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITGKL 420
           LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICE ITGKL
Sbjct: 361 LISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICEPITGKL 420

Query: 421 SEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480
           SEVKLDQPLDYTVW+GLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG
Sbjct: 421 SEVKLDQPLDYTVWMGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHNGG 480

Query: 481 IDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540
           IDSIILHFLPFTSQSRGQDQTM+TPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV
Sbjct: 481 IDSIILHFLPFTSQSRGQDQTMKTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSWIV 540

Query: 541 GVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGPKV 600
           GVTISQECIVLEMKTWNLQVPVQFSNFLNE KLAATATGEKNESERSEIISKNLLSGPKV
Sbjct: 541 GVTISQECIVLEMKTWNLQVPVQFSNFLNEEKLAATATGEKNESERSEIISKNLLSGPKV 600

Query: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660
           VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ
Sbjct: 601 VLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLIDDQ 660

Query: 661 QTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720
           QTRLREAQQKLLKV GKQELLEDRIE AIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF
Sbjct: 661 QTRLREAQQKLLKVRGKQELLEDRIERAIKLHNVLEERIHRLKNLPGAHKRPLSKAEREF 720

Query: 721 KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 780
           KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL
Sbjct: 721 KSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQGSQISQL 780

Query: 781 KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 814
           KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC
Sbjct: 781 KSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 813

[Close]
BLAST of CmaCh04G001580 vs. NCBI nr
Match: XP_038891829.1 (nuclear pore complex protein NUP88 [Benincasa hispida])

HSP 1 Score: 1431.4 bits (3704), Expect = 0.0e+00
Identity = 720/820 (87.80%), Postives = 765/820 (93.29%), Query Frame = 0 

Query: 1   MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFT------AATAVDYGDSVSPPLRSL 60
           MRYN DLNEADS+P RSLTPK DVDWVPLKTHPVFT      +A+A +YG SV PPLR+L
Sbjct: 1   MRYNFDLNEADSDPPRSLTPKRDVDWVPLKTHPVFTPAAASASASAANYGGSVPPPLRNL 60

Query: 61  LVSDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINK 120
           LVSDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVL+P+V LDF+VHKISIN+
Sbjct: 61  LVSDGASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLRPDVQLDFLVHKISINQ 120

Query: 121 NGSAIALVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYS 180
           NGSA+ALVG GGL IMYLYGHSSTRD +TVICRTV+VGPQIY G HDVIRTLQVSWHPYS
Sbjct: 121 NGSALALVGSGGLGIMYLYGHSSTRDDNTVICRTVKVGPQIYCGGHDVIRTLQVSWHPYS 180

Query: 181 NFHLGVLSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDK 240
           NFHLGVLSSDSVFRLFNLSSD VQPEQEYYLQPVEPGQSKNA+SICPVDFSFG DHLWDK
Sbjct: 181 NFHLGVLSSDSVFRLFNLSSDIVQPEQEYYLQPVEPGQSKNATSICPVDFSFGEDHLWDK 240

Query: 241 FSVFILFSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWL 300
           FSVF+LFSDGSIYILCPVVPFRS YKCESILEIYNDAQS+GLKSANPTAVSNS LAISWL
Sbjct: 241 FSVFVLFSDGSIYILCPVVPFRSVYKCESILEIYNDAQSYGLKSANPTAVSNSGLAISWL 300

Query: 301 EETFPNLVQATDGGDMTVIVAHPCALFDASLALQGPLRRACN-NGNEGDISIKGAECEGR 360
           EETFPNLVQATDGGD  VIVAHPCALFDASLA+QGPLRRACN +G+E D+SIKGAECEGR
Sbjct: 301 EETFPNLVQATDGGDAYVIVAHPCALFDASLAMQGPLRRACNDDGDEEDVSIKGAECEGR 360

Query: 361 AVSLLYKLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMIC 420
           AVSLLY LISKDSVLVTAWSGGQLQIDALADEIQPVWNLG PPRV VDPNDNILG AMIC
Sbjct: 361 AVSLLYNLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGCPPRVRVDPNDNILGLAMIC 420

Query: 421 ELITGKLSEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERI 480
           E++TGKLS+VKLDQPLD+TVWLGLPPPLLRLAIVDLALPKKME+ SLI MFVDKLMD+RI
Sbjct: 421 EVVTGKLSKVKLDQPLDHTVWLGLPPPLLRLAIVDLALPKKMEKDSLITMFVDKLMDQRI 480

Query: 481 YALHNGGIDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSNPFPLCGFASLSDS 540
           YALHNGGIDSIILHFLPFTSQS+GQ+QTMRTPSVHPVLN CQGDTSNP PLCGFASLSDS
Sbjct: 481 YALHNGGIDSIILHFLPFTSQSKGQNQTMRTPSVHPVLNACQGDTSNPSPLCGFASLSDS 540

Query: 541 FGYSWIVGVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKN 600
            GYSWI+GVT+SQECIVLEMKTWNL VPVQ SNFL+EGK AA  TGEKNESERSEIISK+
Sbjct: 541 LGYSWILGVTLSQECIVLEMKTWNLLVPVQVSNFLDEGKSAAAGTGEKNESERSEIISKD 600

Query: 601 LLSGPKVVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPEL 660
           LL GPKVVLLPQSSS MRSVTADSIEGRSMLHQYFKLFHENYVEYAH VYYELKQH P+L
Sbjct: 601 LLGGPKVVLLPQSSSTMRSVTADSIEGRSMLHQYFKLFHENYVEYAHAVYYELKQHEPKL 660

Query: 661 KRLIDDQQTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPL 720
           KRLIDDQQTRL+EAQQKL+KV GKQ+LL+DRIE AIKLHNVLEERIH+LKNLPGAHK+PL
Sbjct: 661 KRLIDDQQTRLKEAQQKLIKVEGKQQLLDDRIERAIKLHNVLEERIHQLKNLPGAHKKPL 720

Query: 721 SKAEREFKSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLVNQQHKIHRRNTCVQ 780
           SKAEREFKSTLDHFT +E+DALHTSIDTLTARLRR+TN SKNNNLVNQQ K++RRNT +Q
Sbjct: 721 SKAEREFKSTLDHFTDIELDALHTSIDTLTARLRRFTN-SKNNNLVNQQQKMYRRNTYIQ 780

Query: 781 GSQISQLKSSLEKLSLLNAENAKKVKLVESTIKSKEANRC 814
            SQISQLKSSLEKLSLLNAEN KKVKLVESTI+SKE   C
Sbjct: 781 SSQISQLKSSLEKLSLLNAENTKKVKLVESTIQSKERKIC 819

[Close]
BLAST of CmaCh04G001580 vs. TAIR 10
Match: AT5G05680.1 (nuclear pore complex protein-related )

HSP 1 Score: 895.2 bits (2312), Expect = 3.9e-260
Identity = 461/814 (56.63%), Postives = 597/814 (73.34%), Query Frame = 0 

Query: 1   MRYNLDLNEADSEPRRSLTPKLDVDWVPLKTHPVFTAATAVDYGDSVSPPL-RSLLVSDG 60
           M++N +  E   + RRS TPK  V WVPL++HPVF +  +     +VS    R+ +  DG
Sbjct: 1   MKFNFNETEDAPDSRRSPTPKEPVRWVPLQSHPVFASLPSSQDEPAVSQLFPRNFMAWDG 60

Query: 61  ASRLYFWDSTKLCLHRISIRLGEPEPTSVLAASPSKVLQPNVPLDFMVHKISINKNGSAI 120
            SR+Y+WDS +  LHR+S+RLGEPEP+SVLAA PSKV+QP++ + F V KISINK+GSA+
Sbjct: 61  DSRVYYWDSRRYLLHRLSLRLGEPEPSSVLAAVPSKVMQPDLQVTFSVSKISINKSGSAV 120

Query: 121 ALVGPGGLWIMYLYGHSSTRDSSTVICRTVRVGPQIYYGDHDVIRTLQVSWHPYSNFHLG 180
            L G  G+ +MYL+G +S  + + VICR V +G +IY      I  LQ SWHP S+ HLG
Sbjct: 121 LLAGSDGICVMYLFGRASVIEDN-VICRVVSIGSEIYTSSDSAITLLQASWHPDSDTHLG 180

Query: 181 VLSSDSVFRLFNLSSDGVQPEQEYYLQPVEPGQSKNASSICPVDFSFGGDHLWDKFSVFI 240
           +LSSD+VFRLF+LSSD   PEQEYYLQP EPG+S+ ASSI P DFSFGGDHLWD+F+VFI
Sbjct: 181 ILSSDAVFRLFDLSSDTELPEQEYYLQPGEPGRSRTASSIYPADFSFGGDHLWDRFTVFI 240

Query: 241 LFSDGSIYILCPVVPFRSTYKCESILEIYNDAQSFGLKSANPTAVSNSSLAISWLEETFP 300
           LF+DGSIYILCPVVPF S YK ES++EIYNDA  +G+KS+N  AVSNSSLAI WLE TFP
Sbjct: 241 LFTDGSIYILCPVVPFGSVYKWESVMEIYNDANMYGVKSSNSLAVSNSSLAIEWLEATFP 300

Query: 301 NLV-QATDGGDMTVIVAHPCALFDASLALQGPLRRACNNGNEGDISIKGAECEGRAVSLL 360
           +L  Q T G ++ V+ A P AL DASLALQGPL +A +   + D +++ AEC+GRAVSLL
Sbjct: 301 DLTEQGTRGENILVVKAQPYALLDASLALQGPLYKASSGDGDEDFAVREAECKGRAVSLL 360

Query: 361 YKLISKDSVLVTAWSGGQLQIDALADEIQPVWNLGSPPRVHVDPNDNILGHAMICELITG 420
           Y L+SKDS+LVTAWS GQLQ+DAL DEIQPVW  G+  R+ ++ ++ I G AMICE    
Sbjct: 361 YNLVSKDSILVTAWSAGQLQVDALVDEIQPVWISGNSSRLRMNSHNKIQGVAMICESNIS 420

Query: 421 KLSEVKLDQPLDYTVWLGLPPPLLRLAIVDLALPKKMERCSLIMMFVDKLMDERIYALHN 480
           +L     + PLD+TVWLG PPPLLRLA+VDLALPK  E  SL+ +F D L+ ERIY+LH+
Sbjct: 421 ELPVATSNLPLDHTVWLGHPPPLLRLAMVDLALPKMREGGSLVTLFADSLLPERIYSLHD 480

Query: 481 GGIDSIILHFLPFTSQSRGQDQTMRTPSVHPVLNTCQGDTSNPFPLCGFASLSDSFGYSW 540
           GGIDS +LH LPFTSQ+ G+D+ ++TPSVH VL+TCQ + S   PL GF  LSDSFGYSW
Sbjct: 481 GGIDSTVLHSLPFTSQASGKDEALKTPSVHTVLSTCQ-EESAVSPLLGFVPLSDSFGYSW 540

Query: 541 IVGVTISQECIVLEMKTWNLQVPVQFSNFLNEGKLAATATGEKNESERSEIISKNLLSGP 600
           IV V  S ECIV EMKTW+L +P+  S      K  +++  EK E E S IISK LL+GP
Sbjct: 541 IVAVLSSGECIVAEMKTWDLLLPIHVST----DKTVSSSAIEKKEQENSCIISKELLAGP 600

Query: 601 KVVLLPQSSSNMRSVTADSIEGRSMLHQYFKLFHENYVEYAHTVYYELKQHGPELKRLID 660
           K+ + P +  N RS  A+S+EGRS+L  Y KLFHENY+EYAH V++EL+ H P LKR+ID
Sbjct: 601 KIRIAPHALPNQRSTPANSVEGRSILLDYVKLFHENYIEYAHKVHFELQHHAPNLKRIID 660

Query: 661 DQQTRLREAQQKLLKVGGKQELLEDRIESAIKLHNVLEERIHRLKNLPGAHKRPLSKAER 720
           DQ  RL EA +K+ KV   Q  LE RI+ AI+ H+ LE+ + RL++LPG HK+PL++AE 
Sbjct: 661 DQHQRLAEANEKISKVEKNQSFLEKRIDKAIERHDSLEQCLQRLRSLPGTHKKPLTRAEL 720

Query: 721 EFKSTLDHFTGVEVDALHTSIDTLTARLRRYTNSSKNNNLV-NQQHKIHRRNTCVQGSQI 780
           +FKS LD + GVEVDAL +SI+TL AR+++ T  S    +V   Q K + +   +Q +Q+
Sbjct: 721 DFKSELDQYAGVEVDALQSSIETLRARVKKSTQKSHKGTVVAASQKKQYSKKNLIQDTQM 780

Query: 781 SQLKSSLEKLSLLNAENAKKVKLVESTIKSKEAN 812
           SQL+S+L KLSL+N++N+KKVK+VES +KS+E++
Sbjct: 781 SQLQSTLAKLSLMNSDNSKKVKIVESALKSQESS 808

The following BLAST results are available for this feature:
BLAST of CmaCh04G001580 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FFK65.5e-25956.63Nuclear pore complex protein NUP88 OS=Arabidopsis thaliana OX=3702 GN=NUP88 PE=1... [more]
Q9P3824.4e-0620.30Nucleoporin nup82 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=2848... [more]
BLAST of CmaCh04G001580 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1JXJ00.0e+00100.00nuclear pore complex protein NUP88-like OS=Cucurbita maxima OX=3661 GN=LOC111490... [more]
A0A6J1FTH00.0e+0098.65nuclear pore complex protein NUP88-like OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
A0A6J1GXA70.0e+0088.44nuclear pore complex protein NUP88-like OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
A0A6J1J9F40.0e+0088.44nuclear pore complex protein NUP88-like isoform X1 OS=Cucurbita maxima OX=3661 G... [more]
A0A5A7UW690.0e+0087.32Nuclear pore complex protein NUP88 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C... [more]
BLAST of CmaCh04G001580 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022995007.10.0e+00100.00nuclear pore complex protein NUP88-like [Cucurbita maxima][more]
KAG6600003.10.0e+0098.77Nuclear pore complex protein NUP88, partial [Cucurbita argyrosperma subsp. soror... [more]
XP_023518771.10.0e+0098.65nuclear pore complex protein NUP88-like [Cucurbita pepo subsp. pepo][more]
XP_022943164.10.0e+0098.65nuclear pore complex protein NUP88-like [Cucurbita moschata][more]
XP_038891829.10.0e+0087.80nuclear pore complex protein NUP88 [Benincasa hispida][more]
BLAST of CmaCh04G001580 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G05680.13.9e-26056.63nuclear pore complex protein-related [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 678..705
IPR019321Nucleoporin Nup88PFAMPF10168Nup88coord: 29..227
e-value: 4.7E-17
score: 61.1
coord: 457..803
e-value: 1.9E-8
score: 32.6
IPR037700Nucleoporin NUP88/NUP82PANTHERPTHR13257NUCLEOPORIN NUP84-RELATEDcoord: 16..810
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 28..249

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G001580.1CmaCh04G001580.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045087 innate immune response
biological_process GO:0006406 mRNA export from nucleus
biological_process GO:0006611 protein export from nucleus
biological_process GO:0006606 protein import into nucleus
biological_process GO:0000055 ribosomal large subunit export from nucleus
biological_process GO:0000056 ribosomal small subunit export from nucleus
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0006913 nucleocytoplasmic transport
cellular_component GO:0005643 nuclear pore
molecular_function GO:0005515 protein binding
molecular_function GO:0017056 structural constituent of nuclear pore