CmaCh04G000600 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh04G000600
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionLOW QUALITY PROTEIN: protein WVD2-like 7
LocationCma_Chr04: 287332 .. 287721 (-)
RNA-Seq ExpressionCmaCh04G000600
SyntenyCmaCh04G000600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATTTGATGTGGAGAAGGGACAATAAAGGTGTTGCTGGCTTTGGGATGGGTCGGTGTTGTACTCACTTCACAGGTAGTAGGAATGATCTGAATGCATTGTCCAGGTTCTGTAATTGCCATAATTATTTATCACCATTGCTATTATGCTGCATTGTAATTTAGAAGACATGTATGTTAAGGTTGGGCAGGAATAAACAAAAACACTACATCGTGACTAAATTTCTTTATCTGTTTTGAAAGACTTCATAGATGTATGTTATGTTAAAGTATCTATTAGATTACCATGGCGGATCAGTCGAGAATGAATTCGGAGGGCATATTCTGAATTCGGGAATCCGGGACAATTCAGAATCCAGGACCTACTCAACCTGGAGCTTCAAAAAATGA

mRNA sequence

ATGAATTTGATGTGGAGAAGGGACAATAAAGGTGTTGCTGGCTTTGGGATGGGTCGGTGTTGTACTCACTTCACAGGTAGTAGGAATGATCTGAATGCATTGTCCAGGTTCTGTAATTGCCATAATTATTTATCACCATTGCTATTATGCTGCATTTATCTATTAGATTACCATGGCGGATCAGTCGAGAATGAATTCGGAGGGCATATTCTGAATTCGGGAATCCGGGACAATTCAGAATCCAGGACCTACTCAACCTGGAGCTTCAAAAAATGA

Coding sequence (CDS)

ATGAATTTGATGTGGAGAAGGGACAATAAAGGTGTTGCTGGCTTTGGGATGGGTCGGTGTTGTACTCACTTCACAGGTAGTAGGAATGATCTGAATGCATTGTCCAGGTTCTGTAATTGCCATAATTATTTATCACCATTGCTATTATGCTGCATTTATCTATTAGATTACCATGGCGGATCAGTCGAGAATGAATTCGGAGGGCATATTCTGAATTCGGGAATCCGGGACAATTCAGAATCCAGGACCTACTCAACCTGGAGCTTCAAAAAATGA

Protein sequence

MNLMWRRDNKGVAGFGMGRCCTHFTGSRNDLNALSRFCNCHNYLSPLLLCCIYLLDYHGGSVENEFGGHILNSGIRDNSESRTYSTWSFKK
Homology
[Close]
BLAST of CmaCh04G000600 vs. ExPASy TrEMBL
Match: A0A6J1FVA0 (LOW QUALITY PROTEIN: protein WVD2-like 7 OS=Cucurbita moschata OX=3662 GN=LOC111447605 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.9e-22
Identity = 50/54 (92.59%), Postives = 51/54 (94.44%), Query Frame = 0 

Query: 1   MNLMWRRDNKGVAGFGMGRCCTHFTGSRNDLNALSRFCNCHNYLSPLLLCCIYL 55
           MNLMWRRD KGVAG GMGRCCTHFTGSRNDLNALSRFCNCHNYLSPLLLCCI +
Sbjct: 517 MNLMWRRDIKGVAGLGMGRCCTHFTGSRNDLNALSRFCNCHNYLSPLLLCCIVI 570

[Close]
BLAST of CmaCh04G000600 vs. NCBI nr
Match: XP_022942623.1 (LOW QUALITY PROTEIN: protein WVD2-like 7 [Cucurbita moschata])

HSP 1 Score: 114.8 bits (286), Expect = 4.0e-22
Identity = 50/54 (92.59%), Postives = 51/54 (94.44%), Query Frame = 0 

Query: 1   MNLMWRRDNKGVAGFGMGRCCTHFTGSRNDLNALSRFCNCHNYLSPLLLCCIYL 55
           MNLMWRRD KGVAG GMGRCCTHFTGSRNDLNALSRFCNCHNYLSPLLLCCI +
Sbjct: 517 MNLMWRRDIKGVAGLGMGRCCTHFTGSRNDLNALSRFCNCHNYLSPLLLCCIVI 570

The following BLAST results are available for this feature:
BLAST of CmaCh04G000600 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh04G000600 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1FVA01.9e-2292.59LOW QUALITY PROTEIN: protein WVD2-like 7 OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
BLAST of CmaCh04G000600 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022942623.14.0e-2292.59LOW QUALITY PROTEIN: protein WVD2-like 7 [Cucurbita moschata][more]
BLAST of CmaCh04G000600 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh04G000600.1CmaCh04G000600.1mRNA