CmaCh03G015060 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G015060
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Peptidylprolyl isomerase
Location	Cma_Chr03: 9382497 .. 9383992 (-)
RNA-Seq Expression	CmaCh03G015060
Synteny	CmaCh03G015060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTACCTTCTATCCATCGTCGCGCAACAAGGCAATGAGCGGTGCGCAGGTGGAGGCTAATCCTGTTTTGATCTATCTTCTTCTGAAACTAGAGAGCAGTGTTTGTTGGATATGAGCTCGCTGACAATTTCATTTAGGGCTGCCACTCCCAGAACGCTCAGCTCCAACAACATTTCACCTGATAAATGTCTAACGACGAAACAAGTCTCCAAATTTACCTACACCCGTACCCCAAAAATCTCTTCTTCTCTTCAAGAACTGGAAATGAAGGAGAGCCCAGCTTCATTCGGCAGAAGAGGAGCAATTGGTTGTGGATTCCTACTCGGCCTTGCCAGCTTTCTCCTACAACCATTGCCTGCAACTGCTGAAGCCACACCATGTGAATTCACAACAGCTCCGTCGGGCCTTGCATTTTGCGATAAAGTTGTCGGGACAGGCCCTGAGGCTGAGAAAGGACAGCTAATCAAGGTATGCCTTCAATCACTCGTACCCCTTTGTTCTCTACCATAGATTCAATGATTTGAAATTATACTTGATAAATCTGAAATAATGTGAAGAGTGGGCTCATATAGAATTGATGTTGTATTGTTGTATTGTGGTATTGTATACCCGTGTGAAGTGAGAAATTGGTGATTGGTAGGCACATTATGTTGGAAAACTAGAGAGCGGAAAGGTGTTTGATAGCAGCTACAATCGGGGGAAGCCGTTAACCTTTCGAGTTGGGGTTGGTGAGGTATATATGTATTTATATATATTTTAAGAAACATGGGAAGGAGAGAGTGGATATTAATTAATTGAGAGAAGTAAAGTAAAAATGTGCAGGTTATAAAAGGTTGGGATGAAGGTATTCTTGGGGGCGATGGAGTTCCAGCAATGCTTCCGGGTACGTTTTCCACATAAACTGGAAATTTTGTTAAGCCTATGGAACTGGAATGGTGTTAATTAAAACATCAATTTCGTTGACACTTATTGGTTCGTGGGATTTGTGAAGGAGGGAAGCGGGTTCTAAAGCTTCCTCCACAACTTGGGTATGGCGCGAGAGGTGCTGGATGCAGAGGAGGTAGGATGAAATTTCTGGTTGTTTTCGTGTACTGGTAAAGGGGGTTATGAATCAATTACTTTTAATTAATTGGATAATCATAGTTAATAATCTTAATGCTGTAGTTGAGAATAGGGAAAGGAGTTTGTAGTTGAAAGTGGTGTTTTGGTTTGATTGCGTATGCAGGGTCTTGTATCATTCCTCCCAACTCAGTCCTCTTATTTGATGTGGAGTTCATTGGGAAGGCATGACATCATCGTCCATCCTGGTTCCTTTCGCATCTTCGAATTTTTATTACATTTTTTATTTACTTAGAATTACAATTACAAACTCCTCATACTTGGTTTGGTGCCTTTTCTCGGCCTGTTGTCAACTATACACTTGTTAATTAATTCCAAGGGTTGTTTGGTTGCCACTGTTTTTTGGTTGATGAAGTTTCAAATGCGACATACATGGTC

mRNA sequence

ATTACCTTCTATCCATCGTCGCGCAACAAGGCAATGAGCGGTGCGCAGGTGGAGGCTAATCCTGTTTTGATCTATCTTCTTCTGAAACTAGAGAGCAGTGTTTGTTGGATATGAGCTCGCTGACAATTTCATTTAGGGCTGCCACTCCCAGAACGCTCAGCTCCAACAACATTTCACCTGATAAATGTCTAACGACGAAACAAGTCTCCAAATTTACCTACACCCGTACCCCAAAAATCTCTTCTTCTCTTCAAGAACTGGAAATGAAGGAGAGCCCAGCTTCATTCGGCAGAAGAGGAGCAATTGGTTGTGGATTCCTACTCGGCCTTGCCAGCTTTCTCCTACAACCATTGCCTGCAACTGCTGAAGCCACACCATGTGAATTCACAACAGCTCCGTCGGGCCTTGCATTTTGCGATAAAGTTGTCGGGACAGGCCCTGAGGCTGAGAAAGGACAGCTAATCAAGGCACATTATGTTGGAAAACTAGAGAGCGGAAAGGTGTTTGATAGCAGCTACAATCGGGGGAAGCCGTTAACCTTTCGAGTTGGGGTTGGTGAGGTTATAAAAGGTTGGGATGAAGGTATTCTTGGGGGCGATGGAGTTCCAGCAATGCTTCCGGGAGGGAAGCGGGTTCTAAAGCTTCCTCCACAACTTGGGTATGGCGCGAGAGGTGCTGGATGCAGAGGAGGGTCTTGTATCATTCCTCCCAACTCAGTCCTCTTATTTGATGTGGAGTTCATTGGGAAGGCATGACATCATCGTCCATCCTGGTTCCTTTCGCATCTTCGAATTTTTATTACATTTTTTATTTACTTAGAATTACAATTACAAACTCCTCATACTTGGTTTGGTGCCTTTTCTCGGCCTGTTGTCAACTATACACTTGTTAATTAATTCCAAGGGTTGTTTGGTTGCCACTGTTTTTTGGTTGATGAAGTTTCAAATGCGACATACATGGTC

Coding sequence (CDS)

ATGAGCTCGCTGACAATTTCATTTAGGGCTGCCACTCCCAGAACGCTCAGCTCCAACAACATTTCACCTGATAAATGTCTAACGACGAAACAAGTCTCCAAATTTACCTACACCCGTACCCCAAAAATCTCTTCTTCTCTTCAAGAACTGGAAATGAAGGAGAGCCCAGCTTCATTCGGCAGAAGAGGAGCAATTGGTTGTGGATTCCTACTCGGCCTTGCCAGCTTTCTCCTACAACCATTGCCTGCAACTGCTGAAGCCACACCATGTGAATTCACAACAGCTCCGTCGGGCCTTGCATTTTGCGATAAAGTTGTCGGGACAGGCCCTGAGGCTGAGAAAGGACAGCTAATCAAGGCACATTATGTTGGAAAACTAGAGAGCGGAAAGGTGTTTGATAGCAGCTACAATCGGGGGAAGCCGTTAACCTTTCGAGTTGGGGTTGGTGAGGTTATAAAAGGTTGGGATGAAGGTATTCTTGGGGGCGATGGAGTTCCAGCAATGCTTCCGGGAGGGAAGCGGGTTCTAAAGCTTCCTCCACAACTTGGGTATGGCGCGAGAGGTGCTGGATGCAGAGGAGGGTCTTGTATCATTCCTCCCAACTCAGTCCTCTTATTTGATGTGGAGTTCATTGGGAAGGCATGA

Protein sequence

MSSLTISFRAATPRTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMKESPASFGRRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKAHYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPPQLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA

Homology

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BLAST of CmaCh03G015060 vs. ExPASy Swiss-Prot
Match: Q9SCY2 (Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP13 PE=1 SV=2)

HSP 1 Score: 243.8 bits (621), Expect = 1.8e-63
Identity = 128/221 (57.92%), Postives = 153/221 (69.23%), Query Frame = 0


Query: 1   MSSLTISFRAATP-------RTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMK 60
           MSSL  S    +P       R L +N+++  + +  +   K          SS  EL   
Sbjct: 1   MSSLGFSVGTCSPPSEKRKCRFLVNNSLNKAEAINLRNKQKV---------SSDPELSFA 60

Query: 61  ESPASFGRRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAE 120
           +  +   R   IG GF +G    LL  + A AE T CEF+ +PSGLAFCDKVVG GPEA 
Sbjct: 61  QLSSCGRREAIIGFGFSIG----LLDNVSALAETTSCEFSVSPSGLAFCDKVVGYGPEAV 120

Query: 121 KGQLIKAHYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGK 180
           KGQLIKAHYVGKLE+GKVFDSSYNRGKPLTFR+GVGEVIKGWD+GILG DG+P ML GGK
Sbjct: 121 KGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGK 180

Query: 181 RVLKLPPQLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA 215
           R L++PP+L YG RGAGC+GGSC+IPP SVLLFD+E+IGKA
Sbjct: 181 RTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGKA 208

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BLAST of CmaCh03G015060 vs. ExPASy Swiss-Prot
Match: Q9SCY3 (Photosynthetic NDH subunit of lumenal location 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL4 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.2e-37
Identity = 84/179 (46.93%), Postives = 108/179 (60.34%), Query Frame = 0


Query: 44  SSSLQELEMKESPASFGRRGAIGCGFLLGLASFLLQPLPATAEATP-----------CEF 103
           SSS  E ++      FG    +G GF   LAS +L   P  A+AT            CE+
Sbjct: 37  SSSDCEPKLSVKKRVFG----VGLGF---LASSILSLTPLDADATRIDYYATVGDPLCEY 96

Query: 104 TTAPSGLAFCDKVVGTGPEAEKGQLIKAHYVGKLESGKVFDSSYNRGKPLTFRVGVGEVI 163
           + A SGL FCD  VG G EA +G L+  HY  +   G +FDSSY R +PLT R+GVG+VI
Sbjct: 97  SYAKSGLGFCDLDVGFGDEAPRGVLVNIHYTARFADGTLFDSSYKRARPLTMRIGVGKVI 156

Query: 164 KGWDEGILGGDGVPAMLPGGKRVLKLPPQLGYGARGAGCRGGSCIIPPNSVLLFDVEFI 212
           +G D+GILGG+GVP M  GGKR L++PP+L YG   AGC  G C IP N+ LL+D+ F+
Sbjct: 157 RGLDQGILGGEGVPPMRVGGKRKLQIPPKLAYGPEPAGCFSGDCNIPGNATLLYDINFV 208

[Close]

BLAST of CmaCh03G015060 vs. ExPASy Swiss-Prot
Match: P0A0W2 (FK506-binding protein OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=fbp PE=1 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.0e-22
Identity = 57/114 (50.00%), Postives = 72/114 (63.16%), Query Frame = 0


Query: 98  GLAFCDKVVGTGPEAEKGQLIKAHYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDE 157
           GL   D   G G EA KG+ I  HY G LE+G  FDSS +R +PLT  +GVG+VIKGWDE
Sbjct: 3   GLIIEDLQEGFGKEAVKGKEITVHYTGWLENGTKFDSSLDRRQPLTITLGVGQVIKGWDE 62

Query: 158 GILGGDGVPAMLPGGKRVLKLPPQLGYGARGAGCRGGSCIIPPNSVLLFDVEFI 212
           G  G      M  GGKR L +P ++GYGA GAG      +IPP++ L+F+VE +
Sbjct: 63  GFGG------MKEGGKRKLTIPSEMGYGAHGAG-----GVIPPHATLIFEVELL 105

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BLAST of CmaCh03G015060 vs. ExPASy Swiss-Prot
Match: P56989 (FK506-binding protein OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=fbp PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.6e-22
Identity = 55/105 (52.38%), Postives = 70/105 (66.67%), Query Frame = 0


Query: 107 GTGPEAEKGQLIKAHYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVP 166
           G G EA KG+ I  HY G LE+G  FDSS +R +PLT  +GVG+VIKGWDEG  G     
Sbjct: 12  GFGKEAVKGKEITVHYTGWLENGTKFDSSLDRRQPLTITLGVGQVIKGWDEGFGG----- 71

Query: 167 AMLPGGKRVLKLPPQLGYGARGAGCRGGSCIIPPNSVLLFDVEFI 212
            M  GGKR L +P ++GYGARGAG      +IPP++ L+F+VE +
Sbjct: 72  -MKEGGKRKLTIPSEMGYGARGAG-----GVIPPHATLIFEVELL 105

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BLAST of CmaCh03G015060 vs. ExPASy Swiss-Prot
Match: Q54NB6 (FK506-binding protein 4 OS=Dictyostelium discoideum OX=44689 GN=fkbp4 PE=1 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 7.4e-22
Identity = 57/121 (47.11%), Postives = 72/121 (59.50%), Query Frame = 0


Query: 94  TAPSGLAFCDKVVGTGPEAEKGQLIKAHYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIK 153
           T PSGL + D VVG+GP  + G+ +   Y+GKL +GK FDSS     P TFR+G+ EVI+
Sbjct: 256 TLPSGLQYEDLVVGSGPSPKSGKKVGVKYIGKLTNGKTFDSSLR--TPFTFRIGIREVIR 315

Query: 154 GWDEGILGGDGVPAMLPGGKRVLKLPPQLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGK 213
           GWD       GV +M  GGKR L +P  L YG  GA        IPPN+ L+FDVE +  
Sbjct: 316 GWD------IGVASMKVGGKRRLTIPADLAYGRSGA-----PPSIPPNATLIFDVELVSC 363

Query: 214 A 215
           A
Sbjct: 376 A 363

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BLAST of CmaCh03G015060 vs. ExPASy TrEMBL
Match: A0A6J1IVG8 (Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111478756 PE=4 SV=1)

HSP 1 Score: 433.0 bits (1112), Expect = 7.5e-118
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MSSLTISFRAATPRTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMKESPASFG 60
           MSSLTISFRAATPRTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMKESPASFG
Sbjct: 1   MSSLTISFRAATPRTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMKESPASFG 60

Query: 61  RRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA 120
           RRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA
Sbjct: 61  RRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA 120

Query: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP 180
           HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP
Sbjct: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP 180

Query: 181 QLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA 215
           QLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA
Sbjct: 181 QLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA 214

[Close]

BLAST of CmaCh03G015060 vs. ExPASy TrEMBL
Match: A0A6J1ECL9 (Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111432980 PE=4 SV=1)

HSP 1 Score: 429.1 bits (1102), Expect = 1.1e-116
Identity = 212/214 (99.07%), Postives = 213/214 (99.53%), Query Frame = 0


Query: 1   MSSLTISFRAATPRTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMKESPASFG 60
           MSSLTISFRAATPRTLSSNNISPDKC+TTKQVSKFTYTRTPKISSSLQELEMKESPASFG
Sbjct: 1   MSSLTISFRAATPRTLSSNNISPDKCVTTKQVSKFTYTRTPKISSSLQELEMKESPASFG 60

Query: 61  RRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA 120
           RRGAIGCGFLLGLAS LLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA
Sbjct: 61  RRGAIGCGFLLGLASVLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA 120

Query: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP 180
           HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP
Sbjct: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP 180

Query: 181 QLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA 215
           QLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA
Sbjct: 181 QLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA 214

[Close]

BLAST of CmaCh03G015060 vs. ExPASy TrEMBL
Match: A0A6J1IUS2 (Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111478756 PE=4 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.3e-105
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MSSLTISFRAATPRTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMKESPASFG 60
           MSSLTISFRAATPRTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMKESPASFG
Sbjct: 1   MSSLTISFRAATPRTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMKESPASFG 60

Query: 61  RRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA 120
           RRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA
Sbjct: 61  RRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA 120

Query: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP 180
           HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP
Sbjct: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP 180

Query: 181 QLGYGARGAGCRGG 195
           QLGYGARGAGCRGG
Sbjct: 181 QLGYGARGAGCRGG 194

[Close]

BLAST of CmaCh03G015060 vs. ExPASy TrEMBL
Match: A0A6J1EFM9 (Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111432980 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.7e-104
Identity = 192/194 (98.97%), Postives = 193/194 (99.48%), Query Frame = 0


Query: 1   MSSLTISFRAATPRTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMKESPASFG 60
           MSSLTISFRAATPRTLSSNNISPDKC+TTKQVSKFTYTRTPKISSSLQELEMKESPASFG
Sbjct: 1   MSSLTISFRAATPRTLSSNNISPDKCVTTKQVSKFTYTRTPKISSSLQELEMKESPASFG 60

Query: 61  RRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA 120
           RRGAIGCGFLLGLAS LLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA
Sbjct: 61  RRGAIGCGFLLGLASVLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA 120

Query: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP 180
           HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP
Sbjct: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP 180

Query: 181 QLGYGARGAGCRGG 195
           QLGYGARGAGCRGG
Sbjct: 181 QLGYGARGAGCRGG 194

[Close]

BLAST of CmaCh03G015060 vs. ExPASy TrEMBL
Match: A0A0A0KL42 (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G538680 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.8e-103
Identity = 191/214 (89.25%), Postives = 197/214 (92.06%), Query Frame = 0


Query: 1   MSSLTISFRAATPRTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMKESPASFG 60
           MSSL IS  A TPRTLSS +IS DKCLTTKQVSKFTY RTPKI+   Q+LE KE+PASFG
Sbjct: 1   MSSLAISVGAVTPRTLSSKDISLDKCLTTKQVSKFTYARTPKINFPHQKLEAKENPASFG 60

Query: 61  RRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA 120
           RR AIGCGFLLGL   LLQPLPA AEATPCE TTAPSGLAFCDKVVG+GPEAEKGQLIKA
Sbjct: 61  RREAIGCGFLLGLGKVLLQPLPAAAEATPCELTTAPSGLAFCDKVVGSGPEAEKGQLIKA 120

Query: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP 180
           HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP
Sbjct: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP 180

Query: 181 QLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA 215
           +LGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA
Sbjct: 181 ELGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA 214

[Close]

BLAST of CmaCh03G015060 vs. NCBI nr
Match: XP_022978964.1 (peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic isoform X2 [Cucurbita maxima])

HSP 1 Score: 433.0 bits (1112), Expect = 1.6e-117
Identity = 214/214 (100.00%), Postives = 214/214 (100.00%), Query Frame = 0


Query: 1   MSSLTISFRAATPRTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMKESPASFG 60
           MSSLTISFRAATPRTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMKESPASFG
Sbjct: 1   MSSLTISFRAATPRTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMKESPASFG 60

Query: 61  RRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA 120
           RRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA
Sbjct: 61  RRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA 120

Query: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP 180
           HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP
Sbjct: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP 180

Query: 181 QLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA 215
           QLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA
Sbjct: 181 QLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA 214

[Close]

BLAST of CmaCh03G015060 vs. NCBI nr
Match: XP_022925594.1 (peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic isoform X2 [Cucurbita moschata] >XP_023544801.1 peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic isoform X3 [Cucurbita pepo subsp. pepo] >KAG6581529.1 Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 429.1 bits (1102), Expect = 2.2e-116
Identity = 212/214 (99.07%), Postives = 213/214 (99.53%), Query Frame = 0


Query: 1   MSSLTISFRAATPRTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMKESPASFG 60
           MSSLTISFRAATPRTLSSNNISPDKC+TTKQVSKFTYTRTPKISSSLQELEMKESPASFG
Sbjct: 1   MSSLTISFRAATPRTLSSNNISPDKCVTTKQVSKFTYTRTPKISSSLQELEMKESPASFG 60

Query: 61  RRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA 120
           RRGAIGCGFLLGLAS LLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA
Sbjct: 61  RRGAIGCGFLLGLASVLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA 120

Query: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP 180
           HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP
Sbjct: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP 180

Query: 181 QLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA 215
           QLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA
Sbjct: 181 QLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA 214

[Close]

BLAST of CmaCh03G015060 vs. NCBI nr
Match: KAG7034822.1 (Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 415.2 bits (1066), Expect = 3.4e-112
Identity = 212/239 (88.70%), Postives = 213/239 (89.12%), Query Frame = 0


Query: 1   MSSLTISFRAATPRTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMKESPASFG 60
           MSSLTISFRAATPRTLSSNNISPDKC+TTKQVSKFTYTRTPKISSSLQELEMKESPASFG
Sbjct: 1   MSSLTISFRAATPRTLSSNNISPDKCVTTKQVSKFTYTRTPKISSSLQELEMKESPASFG 60

Query: 61  RRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA 120
           RRGAIGCGFLLGLAS LLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA
Sbjct: 61  RRGAIGCGFLLGLASVLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA 120

Query: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLP---------- 180
           HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLP          
Sbjct: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPAYGSGMVLIK 180

Query: 181 ---------------GGKRVLKLPPQLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA 215
                          GGKRVLKLPPQLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA
Sbjct: 181 TSISLTLNGVRGICEGGKRVLKLPPQLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA 239

[Close]

BLAST of CmaCh03G015060 vs. NCBI nr
Match: XP_038877522.1 (peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic [Benincasa hispida])

HSP 1 Score: 396.0 bits (1016), Expect = 2.1e-106
Identity = 194/214 (90.65%), Postives = 203/214 (94.86%), Query Frame = 0


Query: 1   MSSLTISFRAATPRTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMKESPASFG 60
           MSS+TIS  AATPRTLSSNNISPDKC TTKQVSKF + RTPKIS S QELE+KE PASFG
Sbjct: 1   MSSVTISVGAATPRTLSSNNISPDKCQTTKQVSKFNHIRTPKISVSHQELEVKEKPASFG 60

Query: 61  RRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA 120
           RR AIGCGFLLGLA+ LLQPLPA AEATPCEFTTAPSGLAFCDKV+GTGPEAEKGQLIKA
Sbjct: 61  RREAIGCGFLLGLANVLLQPLPAAAEATPCEFTTAPSGLAFCDKVIGTGPEAEKGQLIKA 120

Query: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP 180
           HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGG+GVPAMLPGGKRVLKLPP
Sbjct: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGEGVPAMLPGGKRVLKLPP 180

Query: 181 QLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA 215
           +LGYGARGAGC+GGSC+IPPNSVLLFDVEFIGKA
Sbjct: 181 KLGYGARGAGCKGGSCVIPPNSVLLFDVEFIGKA 214

[Close]

BLAST of CmaCh03G015060 vs. NCBI nr
Match: XP_022978963.1 (peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic isoform X1 [Cucurbita maxima])

HSP 1 Score: 391.0 bits (1003), Expect = 6.8e-105
Identity = 194/194 (100.00%), Postives = 194/194 (100.00%), Query Frame = 0


Query: 1   MSSLTISFRAATPRTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMKESPASFG 60
           MSSLTISFRAATPRTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMKESPASFG
Sbjct: 1   MSSLTISFRAATPRTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMKESPASFG 60

Query: 61  RRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA 120
           RRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA
Sbjct: 61  RRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAEKGQLIKA 120

Query: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP 180
           HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP
Sbjct: 121 HYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPP 180

Query: 181 QLGYGARGAGCRGG 195
           QLGYGARGAGCRGG
Sbjct: 181 QLGYGARGAGCRGG 194

[Close]

BLAST of CmaCh03G015060 vs. TAIR 10
Match: AT5G45680.1 (FK506-binding protein 13 )

HSP 1 Score: 243.8 bits (621), Expect = 1.2e-64
Identity = 128/221 (57.92%), Postives = 153/221 (69.23%), Query Frame = 0


Query: 1   MSSLTISFRAATP-------RTLSSNNISPDKCLTTKQVSKFTYTRTPKISSSLQELEMK 60
           MSSL  S    +P       R L +N+++  + +  +   K          SS  EL   
Sbjct: 1   MSSLGFSVGTCSPPSEKRKCRFLVNNSLNKAEAINLRNKQKV---------SSDPELSFA 60

Query: 61  ESPASFGRRGAIGCGFLLGLASFLLQPLPATAEATPCEFTTAPSGLAFCDKVVGTGPEAE 120
           +  +   R   IG GF +G    LL  + A AE T CEF+ +PSGLAFCDKVVG GPEA 
Sbjct: 61  QLSSCGRREAIIGFGFSIG----LLDNVSALAETTSCEFSVSPSGLAFCDKVVGYGPEAV 120

Query: 121 KGQLIKAHYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLPGGK 180
           KGQLIKAHYVGKLE+GKVFDSSYNRGKPLTFR+GVGEVIKGWD+GILG DG+P ML GGK
Sbjct: 121 KGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGK 180

Query: 181 RVLKLPPQLGYGARGAGCRGGSCIIPPNSVLLFDVEFIGKA 215
           R L++PP+L YG RGAGC+GGSC+IPP SVLLFD+E+IGKA
Sbjct: 181 RTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGKA 208

[Close]

BLAST of CmaCh03G015060 vs. TAIR 10
Match: AT4G39710.1 (FK506-binding protein 16-2 )

HSP 1 Score: 157.1 bits (396), Expect = 1.5e-38
Identity = 84/179 (46.93%), Postives = 108/179 (60.34%), Query Frame = 0


Query: 44  SSSLQELEMKESPASFGRRGAIGCGFLLGLASFLLQPLPATAEATP-----------CEF 103
           SSS  E ++      FG    +G GF   LAS +L   P  A+AT            CE+
Sbjct: 37  SSSDCEPKLSVKKRVFG----VGLGF---LASSILSLTPLDADATRIDYYATVGDPLCEY 96

Query: 104 TTAPSGLAFCDKVVGTGPEAEKGQLIKAHYVGKLESGKVFDSSYNRGKPLTFRVGVGEVI 163
           + A SGL FCD  VG G EA +G L+  HY  +   G +FDSSY R +PLT R+GVG+VI
Sbjct: 97  SYAKSGLGFCDLDVGFGDEAPRGVLVNIHYTARFADGTLFDSSYKRARPLTMRIGVGKVI 156

Query: 164 KGWDEGILGGDGVPAMLPGGKRVLKLPPQLGYGARGAGCRGGSCIIPPNSVLLFDVEFI 212
           +G D+GILGG+GVP M  GGKR L++PP+L YG   AGC  G C IP N+ LL+D+ F+
Sbjct: 157 RGLDQGILGGEGVPPMRVGGKRKLQIPPKLAYGPEPAGCFSGDCNIPGNATLLYDINFV 208

[Close]

BLAST of CmaCh03G015060 vs. TAIR 10
Match: AT4G39710.2 (FK506-binding protein 16-2 )

HSP 1 Score: 107.5 bits (267), Expect = 1.4e-23
Identity = 62/136 (45.59%), Postives = 79/136 (58.09%), Query Frame = 0


Query: 44  SSSLQELEMKESPASFGRRGAIGCGFLLGLASFLLQPLPATAEATP-----------CEF 103
           SSS  E ++      FG    +G GF   LAS +L   P  A+AT            CE+
Sbjct: 37  SSSDCEPKLSVKKRVFG----VGLGF---LASSILSLTPLDADATRIDYYATVGDPLCEY 96

Query: 104 TTAPSGLAFCDKVVGTGPEAEKGQLIKAHYVGKLESGKVFDSSYNRGKPLTFRVGVGEVI 163
           + A SGL FCD  VG G EA +G L+  HY  +   G +FDSSY R +PLT R+GVG+VI
Sbjct: 97  SYAKSGLGFCDLDVGFGDEAPRGVLVNIHYTARFADGTLFDSSYKRARPLTMRIGVGKVI 156

Query: 164 KGWDEGILGGDGVPAM 169
           +G D+GILGG+GVP M
Sbjct: 157 RGLDQGILGGEGVPPM 165

[Close]

BLAST of CmaCh03G015060 vs. TAIR 10
Match: AT4G25340.1 (FK506 BINDING PROTEIN 53 )

HSP 1 Score: 98.2 bits (243), Expect = 8.4e-21
Identity = 55/130 (42.31%), Postives = 77/130 (59.23%), Query Frame = 0


Query: 85  AEATPCEFTTAPSGLAFCDKVVG--TGPEAEKGQLIKAHYVGKLE-SGKVFDSSYNRGKP 144
           A++   +  T P+GL   +  +G   G  A+ G+ +   Y+GKL+ +GK+FDS+  +  P
Sbjct: 357 ADSKSSQVRTYPNGLIVEELSMGKPNGKRADPGKTVSVRYIGKLQKNGKIFDSNIGK-SP 416

Query: 145 LTFRVGVGEVIKGWDEGILGGDGVPAMLPGGKRVLKLPPQLGYGARGAGCRGGSCIIPPN 204
             FR+G+G VIKGWD G+ G      M  G KR L +PP +GYG +GAG +     IPPN
Sbjct: 417 FKFRLGIGSVIKGWDVGVNG------MRVGDKRKLTIPPSMGYGVKGAGGQ-----IPPN 474

Query: 205 SVLLFDVEFI 212
           S L FDVE I
Sbjct: 477 SWLTFDVELI 474

[Close]

BLAST of CmaCh03G015060 vs. TAIR 10
Match: AT5G48580.1 (FK506- and rapamycin-binding protein 15 kD-2 )

HSP 1 Score: 97.1 bits (240), Expect = 1.9e-20
Identity = 49/101 (48.51%), Postives = 62/101 (61.39%), Query Frame = 0


Query: 111 EAEKGQLIKAHYVGKLESGKVFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGDGVPAMLP 170
           +A KG  IK HY GKL  G VFDSS+ RG P  F++G G+VIKGWD+G+LG         
Sbjct: 48  QAHKGDTIKVHYRGKLTDGTVFDSSFERGDPFEFKLGSGQVIKGWDQGLLGA------CV 107

Query: 171 GGKRVLKLPPQLGYGARGAGCRGGSCIIPPNSVLLFDVEFI 212
           G KR LK+P +LGYG +G+        IP  + L+FD E I
Sbjct: 108 GEKRKLKIPAKLGYGEQGS-----PPTIPGGATLIFDTELI 137

The following BLAST results are available for this feature:

BLAST of CmaCh03G015060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCY2	1.8e-63	57.92	Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic OS=Arabidopsis thalian...	[more]
Q9SCY3	2.2e-37	46.93	Photosynthetic NDH subunit of lumenal location 4, chloroplastic OS=Arabidopsis t...	[more]
P0A0W2	2.0e-22	50.00	FK506-binding protein OS=Neisseria meningitidis serogroup B (strain MC58) OX=122...	[more]
P56989	2.6e-22	52.38	FK506-binding protein OS=Neisseria meningitidis serogroup A / serotype 4A (strai...	[more]
Q54NB6	7.4e-22	47.11	FK506-binding protein 4 OS=Dictyostelium discoideum OX=44689 GN=fkbp4 PE=1 SV=1	[more]

BLAST of CmaCh03G015060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IVG8	7.5e-118	100.00	Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111478756 PE=4 SV=1	[more]
A0A6J1ECL9	1.1e-116	99.07	Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111432980 PE=4 SV=1	[more]
A0A6J1IUS2	3.3e-105	100.00	Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111478756 PE=4 SV=1	[more]
A0A6J1EFM9	4.7e-104	98.97	Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111432980 PE=4 SV=1	[more]
A0A0A0KL42	1.8e-103	89.25	Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G538680 PE=4 SV=1	[more]

BLAST of CmaCh03G015060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978964.1	1.6e-117	100.00	peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic isoform X2 [Cucurbita ...	[more]
XP_022925594.1	2.2e-116	99.07	peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic isoform X2 [Cucurbita ...	[more]
KAG7034822.1	3.4e-112	88.70	Peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic [Cucurbita argyrosperm...	[more]
XP_038877522.1	2.1e-106	90.65	peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic [Benincasa hispida]	[more]
XP_022978963.1	6.8e-105	100.00	peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic isoform X1 [Cucurbita ...	[more]

BLAST of CmaCh03G015060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G45680.1	1.2e-64	57.92	FK506-binding protein 13	[more]
AT4G39710.1	1.5e-38	46.93	FK506-binding protein 16-2	[more]
AT4G39710.2	1.4e-23	45.59	FK506-binding protein 16-2	[more]
AT4G25340.1	8.4e-21	42.31	FK506 BINDING PROTEIN 53	[more]
AT5G48580.1	1.9e-20	48.51	FK506- and rapamycin-binding protein 15 kD-2	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00254	FKBP_C	coord: 110..211 e-value: 2.7E-28 score: 98.1
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50059	FKBP_PPIASE	coord: 115..214 score: 27.563707
None	No IPR available	GENE3D	3.10.50.40		coord: 86..214 e-value: 5.2E-48 score: 164.4
None	No IPR available	PANTHER	PTHR45779:SF7	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP13, CHLOROPLASTIC	coord: 16..214
None	No IPR available	SUPERFAMILY	54534	FKBP-like	coord: 91..211
IPR044609	Peptidyl-prolyl cis-trans isomerase FKBP2/11	PANTHER	PTHR45779	FAMILY NOT NAMED	coord: 16..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G015060.1	CmaCh03G015060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0061077	chaperone-mediated protein folding
biological_process	GO:0000413	protein peptidyl-prolyl isomerization
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity