CmaCh03G013710 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh03G013710
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr03: 8708197 .. 8709736 (+)
RNA-Seq ExpressionCmaCh03G013710
SyntenyCmaCh03G013710
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTACGTATCTATTCCTTGTGTAAGTTGTGTATTTCTCGAGTAGATTTCATTGACACATTTGACAGTCATGCTATTGATATGTTCTCATCTGTAAATTTTCACTTGATTAAGATTAATGTTACTTGGTGGTTTCATGCTGTGAAGTATTATATCTAATGATTAACATCTTTACCCAAGAATTAGTTACCTGGAGCAAACTAAACCTTTGCCGTTTTTTAATCTAATTTGTTCTTTTATGTTGGAGTTTAAGCATGGACGTATTCAAGTTTAATGTACATTCTTTGTTTCACTACCGATTATACGTTGATTAGTGCTTTGAGCCTAGTGTTTTTACTTCTTGACTATCAACTATATTCATGCATGTAAATTAGGAAACCATTAAACACCTTGTTTTAAGATTTTTGGAGACTATGATCACTTATTTTATATCTGCAACTCATGACAAAATTAATATGACTTCCTTTAACATGTTCATTTCATCTTACTTATGCTTCGTACCATTTTGTTCCTTGTTGACTATCGCTCTATGTGTTCTACAAGTTTAATAGTTCTACAGTATTGCACTTCATGGATGGAAATGGGGGTTGTGAGGAGTGGTTACTAATAGCAAATAAGGCTTCCTATTTGGAAAAATGAAAAGAAAAAGAAAGAAAGAGAGATAGATGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGATCCAGCAAGGAAAAAAGGAAAGAGAAGAAAAAAGAGAAGAAAGAAGAAAAGAACACCGGTATTGAAGAGTATGGTACACCATTTTTCCTTAGTATATTATCTTATGCATGATACTAACATTTATTAACATGCGAATCTTTGTTGTTCATATTTCATTTGTTAAACTGCTTTAGTTTAGTGAAAATTTCTTTGGAAAAAAAAAGTGTGGAAGTAAATATTGCTTCAATTTGAGGTGCCGTAAGTTAAATTCAAGATTCAAGAGGAACCTAACTTATTTACTGGGTTAATGTGTATTTGCTGCTATTTTCAGCGCGATACTTCTAATCTTGATGATGACGCCGCAATGAGGAAGAAGTGTCTGCTCATAACTTTCTATTCCTATTTCAGGAAAACAGTGTCCCAGCTGAAGGAATGCTTTTGGTATATATGCTTCTATTAGTAGAAGGGTTATTTCTCGGTGTCCTTGGGTTGCATAGTTTAGCATAATGATAGATGACGATTTCTGTCTGTTATGCTATAAGAAGTTTTATGGTTTCTCTGCAGGTCTTTTGAAGGGTCAGTTCTAAATTTCTCCTACCAGGAAAATTTTAGGTACGCTTATAATTCTTTTCCTTTCTCTAAGATCTAAGAGCCTATTTGAAATGACTTTCTAAGTGCTTAAAAATATTTTTTTCTCATAAAAACTCTTCTTAGAATTCTAAATAGGTAATAATTGTTAGGTTCTGA

mRNA sequence

ATGTTACGTATCTATTCCTTGTGTAAGTTGTGTATTTCTCGAGTAGATTTCATTGACACATTTGACAGTCATGCTATTGATATGTTCTCATCTCGCGATACTTCTAATCTTGATGATGACGCCGCAATGAGGAAGAAGTGTCTGCTCATAACTTTCTATTCCTATTTCAGGAAAACAGTGTCCCAGCTGAAGGAATGCTTTTGGTCTTTTGAAGGGTCAGTTCTAAATTTCTCCTACCAGGAAAATTTTAGGTTCTGA

Coding sequence (CDS)

ATGTTACGTATCTATTCCTTGTGTAAGTTGTGTATTTCTCGAGTAGATTTCATTGACACATTTGACAGTCATGCTATTGATATGTTCTCATCTCGCGATACTTCTAATCTTGATGATGACGCCGCAATGAGGAAGAAGTGTCTGCTCATAACTTTCTATTCCTATTTCAGGAAAACAGTGTCCCAGCTGAAGGAATGCTTTTGGTCTTTTGAAGGGTCAGTTCTAAATTTCTCCTACCAGGAAAATTTTAGGTTCTGA

Protein sequence

MLRIYSLCKLCISRVDFIDTFDSHAIDMFSSRDTSNLDDDAAMRKKCLLITFYSYFRKTVSQLKECFWSFEGSVLNFSYQENFRF
Homology
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BLAST of CmaCh03G013710 vs. NCBI nr
Match: KAG7034686.1 (hypothetical protein SDJN02_04416, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 68.2 bits (165), Expect = 4.0e-08
Identity = 34/50 (68.00%), Postives = 38/50 (76.00%), Query Frame = 0 

Query: 33 DTSNLDDDAAMRKKCLLITFYSYFRKTVSQLKECFWSFEGSVLNFSYQEN 83
          DT+NLDDDAAMRKKCLLITFYSYFRKTV       +  +G  LNFS +EN
Sbjct: 2  DTANLDDDAAMRKKCLLITFYSYFRKTVLWRASSKFLLQGKCLNFSNKEN 51

The following BLAST results are available for this feature:
BLAST of CmaCh03G013710 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh03G013710 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh03G013710 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7034686.14.0e-0868.00hypothetical protein SDJN02_04416, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CmaCh03G013710 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G013710.1CmaCh03G013710.1mRNA