CmaCh03G013200 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G013200
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	dof zinc finger protein DOF1.5-like
Location	Cma_Chr03: 8520805 .. 8521326 (-)
RNA-Seq Expression	CmaCh03G013200
Synteny	CmaCh03G013200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCAGGTTCATGGTAGCGCCACGGGTGGAATTAAGCTTTTTGGCACTATCATTCCTTTGCAGACCAGAAAAGTCAAGGATCAACCGGAGAAAGGCGGCGGCGGCGGAGGCGGTGCTGACGGTGATCAAACAGAGATGAAGAGGCCTGAAAAGATTATTCCATGTCCGAGATGTAAGAGCATGGACACCAAATTCTGTTACTTTAACAATTACAATGTTAATCAGCCCAGACATTTCTGCAAGGGTTGTCAAAGGTACTGGACTGCTGGTGGGGCGCTCCGGAATGTCCCCATCGGAGCTGGACGACGGAGAGCCAAGCCGCCGCCTAATTGCCGGACGCTTTCCGGCGAGATGCCCGATGATTATGGGCAACTTTACGATGCTGCTTCTGGGATTATTCATCAGCTTGAATTGGACGCGGTGGAGGGGTGGCATCTGGCTGTGGCGGAACAGGATTTTACCCAAGTTTTTCCTCTCAAACGCCAGAAGATTATCGGTCAATACGGTCAAACGTCTTAA

mRNA sequence

ATGGCTCAGGTTCATGGTAGCGCCACGGGTGGAATTAAGCTTTTTGGCACTATCATTCCTTTGCAGACCAGAAAAGTCAAGGATCAACCGGAGAAAGGCGGCGGCGGCGGAGGCGGTGCTGACGGTGATCAAACAGAGATGAAGAGGCCTGAAAAGATTATTCCATGTCCGAGATGTAAGAGCATGGACACCAAATTCTGTTACTTTAACAATTACAATGTTAATCAGCCCAGACATTTCTGCAAGGGTTGTCAAAGGTACTGGACTGCTGGTGGGGCGCTCCGGAATGTCCCCATCGGAGCTGGACGACGGAGAGCCAAGCCGCCGCCTAATTGCCGGACGCTTTCCGGCGAGATGCCCGATGATTATGGGCAACTTTACGATGCTGCTTCTGGGATTATTCATCAGCTTGAATTGGACGCGGTGGAGGGGTGGCATCTGGCTGTGGCGGAACAGGATTTTACCCAAGTTTTTCCTCTCAAACGCCAGAAGATTATCGGTCAATACGGTCAAACGTCTTAA

Coding sequence (CDS)

ATGGCTCAGGTTCATGGTAGCGCCACGGGTGGAATTAAGCTTTTTGGCACTATCATTCCTTTGCAGACCAGAAAAGTCAAGGATCAACCGGAGAAAGGCGGCGGCGGCGGAGGCGGTGCTGACGGTGATCAAACAGAGATGAAGAGGCCTGAAAAGATTATTCCATGTCCGAGATGTAAGAGCATGGACACCAAATTCTGTTACTTTAACAATTACAATGTTAATCAGCCCAGACATTTCTGCAAGGGTTGTCAAAGGTACTGGACTGCTGGTGGGGCGCTCCGGAATGTCCCCATCGGAGCTGGACGACGGAGAGCCAAGCCGCCGCCTAATTGCCGGACGCTTTCCGGCGAGATGCCCGATGATTATGGGCAACTTTACGATGCTGCTTCTGGGATTATTCATCAGCTTGAATTGGACGCGGTGGAGGGGTGGCATCTGGCTGTGGCGGAACAGGATTTTACCCAAGTTTTTCCTCTCAAACGCCAGAAGATTATCGGTCAATACGGTCAAACGTCTTAA

Protein sequence

MAQVHGSATGGIKLFGTIIPLQTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEMPDDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS

Homology

[Close]

BLAST of CmaCh03G013200 vs. ExPASy Swiss-Prot
Match: P68350 (Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.1e-39
Identity = 88/166 (53.01%), Postives = 104/166 (62.65%), Query Frame = 0


Query: 11  GIKLFGTIIPL----------QTRKVKDQPE-KGGGGGGGADGDQTEMKRPEKIIPCPRC 70
           GIKLFG  I            + ++ + QPE +          D T  KRP+KIIPCPRC
Sbjct: 8   GIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDKIIPCPRC 67

Query: 71  KSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEM 130
           KSM+TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRR++KPP          
Sbjct: 68  KSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRV------- 127

Query: 131 PDDYGQLYDAASGIIHQLELDA--VEGWHLAVAEQ-DFTQVFPLKR 163
              + +L  AA+G + Q+ELDA  VE W  A A    F   FP+KR
Sbjct: 128 -GGFAELLGAATGAVDQVELDALLVEEWRAATASHGGFRHDFPVKR 165

[Close]

BLAST of CmaCh03G013200 vs. ExPASy Swiss-Prot
Match: O22967 (Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.1e-37
Identity = 86/164 (52.44%), Postives = 101/164 (61.59%), Query Frame = 0


Query: 11  GIKLFGTIIPLQTRKVKDQ-----PEKGG--GGGGGADGDQTEMKRPEKIIPCPRCKSMD 70
           GIKLFG  I   TR +K++     PE+         +  D T  KRP+KII CPRCKSM+
Sbjct: 8   GIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPRCKSME 67

Query: 71  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEMPDDY 130
           TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVP+GAGRR++KPP   R + G + D  
Sbjct: 68  TKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPG--RVVVGMLGDGN 127

Query: 131 GQLYDAASGIIHQLELD---AVEGWH--LAVAEQDFTQVFPLKR 163
           G         + Q+EL     VE W    A A   F   FP+KR
Sbjct: 128 G---------VRQVELINGLLVEEWQHAAAAAHGSFRHDFPMKR 160

[Close]

BLAST of CmaCh03G013200 vs. ExPASy Swiss-Prot
Match: Q93ZL5 (Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2)

HSP 1 Score: 128.6 bits (322), Expect = 6.6e-29
Identity = 55/88 (62.50%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 22  QTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFC 81
           +T K     E+ GG     +G   ++K+P+KI+PCPRC SM+TKFCY+NNYNVNQPRHFC
Sbjct: 109 ETTKAAKTNEESGGTACSQEG---KLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFC 168

Query: 82  KGCQRYWTAGGALRNVPIGAGRRRAKPP 110
           K CQRYWTAGG +RNVP+GAGRR+ K P
Sbjct: 169 KKCQRYWTAGGTMRNVPVGAGRRKNKSP 193

[Close]

BLAST of CmaCh03G013200 vs. ExPASy Swiss-Prot
Match: Q8W1E3 (Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2)

HSP 1 Score: 127.5 bits (319), Expect = 1.5e-28
Identity = 59/99 (59.60%), Postives = 73/99 (73.74%), Query Frame = 0


Query: 12  IKLFGTIIPLQT-RKVKDQPEKGGGGGGGADGDQTE--MKRPEKIIPCPRCKSMDTKFCY 71
           IKLFG  IP  T  +V D+ E+        D  + +  +K+P KI+PCPRC SM+TKFCY
Sbjct: 9   IKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCY 68

Query: 72  FNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAK 108
           +NNYNVNQPRHFCK CQRYWT+GG +R+VPIGAGRR+ K
Sbjct: 69  YNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNK 107

[Close]

BLAST of CmaCh03G013200 vs. ExPASy Swiss-Prot
Match: Q8LFV3 (Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 7.3e-28
Identity = 49/65 (75.38%), Postives = 58/65 (89.23%), Query Frame = 0


Query: 43  DQTEMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAG 102
           D   +K+P KI+PCPRCKSM+TKFCY+NNYN+NQPRHFCK CQRYWTAGG +RNVP+GAG
Sbjct: 99  DGKTLKKPTKILPCPRCKSMETKFCYYNNYNINQPRHFCKACQRYWTAGGTMRNVPVGAG 158

Query: 103 RRRAK 108
           RR+ K
Sbjct: 159 RRKNK 163

[Close]

BLAST of CmaCh03G013200 vs. ExPASy TrEMBL
Match: A0A6J1ILZ6 (dof zinc finger protein DOF1.5-like OS=Cucurbita maxima OX=3661 GN=LOC111478624 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 7.5e-100
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MAQVHGSATGGIKLFGTIIPLQTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCK 60
           MAQVHGSATGGIKLFGTIIPLQTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCK
Sbjct: 48  MAQVHGSATGGIKLFGTIIPLQTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCK 107

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEMP 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEMP
Sbjct: 108 SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEMP 167

Query: 121 DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS 174
           DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS
Sbjct: 168 DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS 220

[Close]

BLAST of CmaCh03G013200 vs. ExPASy TrEMBL
Match: A0A6J1EJ46 (dof zinc finger protein DOF1.5-like OS=Cucurbita moschata OX=3662 GN=LOC111433075 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 2.1e-94
Identity = 166/173 (95.95%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MAQVHGSATGGIKLFGTIIPLQTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCK 60
           MAQ HGSAT GIKLFGTIIPLQTRKVKDQPEKGGGGG   +GDQTEMKRPEKIIPCPRCK
Sbjct: 1   MAQFHGSATAGIKLFGTIIPLQTRKVKDQPEKGGGGG---EGDQTEMKRPEKIIPCPRCK 60

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEMP 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGE+P
Sbjct: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELP 120

Query: 121 DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS 174
           DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS
Sbjct: 121 DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS 170

[Close]

BLAST of CmaCh03G013200 vs. ExPASy TrEMBL
Match: A0A6J1ELQ8 (dof zinc finger protein DOF1.5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111433719 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 8.0e-86
Identity = 153/174 (87.93%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MAQVHGSATGGIKLFGTIIPLQTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCK 60
           MA+VH S TGGIKLFGT+I LQTR +K++PEKGG GGG   GDQ EMKRPEKIIPCPRCK
Sbjct: 1   MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGG---GDQPEMKRPEKIIPCPRCK 60

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPP-PNCRTLSGEM 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPP PNCR LSGE+
Sbjct: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGEL 120

Query: 121 PDDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS 174
           P+DYGQLYDAASGIIHQLELDAVEGWHL VAEQDF QVFPLKRQKIIGQ+GQTS
Sbjct: 121 PEDYGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 171

[Close]

BLAST of CmaCh03G013200 vs. ExPASy TrEMBL
Match: A0A6J1EFS0 (dof zinc finger protein DOF1.5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111433719 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 8.0e-86
Identity = 153/174 (87.93%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MAQVHGSATGGIKLFGTIIPLQTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCK 60
           MA+VH S TGGIKLFGT+I LQTR +K++PEKGG GGG   GDQ EMKRPEKIIPCPRCK
Sbjct: 52  MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGG---GDQPEMKRPEKIIPCPRCK 111

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPP-PNCRTLSGEM 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPP PNCR LSGE+
Sbjct: 112 SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGEL 171

Query: 121 PDDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS 174
           P+DYGQLYDAASGIIHQLELDAVEGWHL VAEQDF QVFPLKRQKIIGQ+GQTS
Sbjct: 172 PEDYGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 222

[Close]

BLAST of CmaCh03G013200 vs. ExPASy TrEMBL
Match: A0A5D3CPV7 (Dof zinc finger protein DOF1.5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G008210 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.8e-85
Identity = 148/173 (85.55%), Postives = 160/173 (92.49%), Query Frame = 0


Query: 1   MAQVHGSATGGIKLFGTIIPLQTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCK 60
           MA+VH S   GIKLFGT+I LQTRK+K++PEKGG   GG +GD+TEMKRPEKIIPCPRCK
Sbjct: 1   MAEVHSSNADGIKLFGTMIHLQTRKLKEEPEKGGPVAGGGEGDETEMKRPEKIIPCPRCK 60

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEMP 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGE+ 
Sbjct: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELS 120

Query: 121 DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS 174
           +DYGQ YDAASGIIHQLELDAVEGWHL VAEQDFT+VFP KR+KIIGQ+GQTS
Sbjct: 121 EDYGQYYDAASGIIHQLELDAVEGWHLTVAEQDFTKVFPFKRRKIIGQHGQTS 173

[Close]

BLAST of CmaCh03G013200 vs. NCBI nr
Match: XP_022978762.1 (dof zinc finger protein DOF1.5-like [Cucurbita maxima])

HSP 1 Score: 372.9 bits (956), Expect = 1.5e-99
Identity = 173/173 (100.00%), Postives = 173/173 (100.00%), Query Frame = 0


Query: 1   MAQVHGSATGGIKLFGTIIPLQTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCK 60
           MAQVHGSATGGIKLFGTIIPLQTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCK
Sbjct: 48  MAQVHGSATGGIKLFGTIIPLQTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCK 107

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEMP 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEMP
Sbjct: 108 SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEMP 167

Query: 121 DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS 174
           DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS
Sbjct: 168 DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS 220

[Close]

BLAST of CmaCh03G013200 vs. NCBI nr
Match: XP_022925765.1 (dof zinc finger protein DOF1.5-like [Cucurbita moschata] >KAG6581357.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034643.1 Dof zinc finger protein DOF1.5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 354.8 bits (909), Expect = 4.3e-94
Identity = 166/173 (95.95%), Postives = 168/173 (97.11%), Query Frame = 0


Query: 1   MAQVHGSATGGIKLFGTIIPLQTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCK 60
           MAQ HGSAT GIKLFGTIIPLQTRKVKDQPEKGGGGG   +GDQTEMKRPEKIIPCPRCK
Sbjct: 1   MAQFHGSATAGIKLFGTIIPLQTRKVKDQPEKGGGGG---EGDQTEMKRPEKIIPCPRCK 60

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEMP 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGE+P
Sbjct: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELP 120

Query: 121 DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS 174
           DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS
Sbjct: 121 DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS 170

[Close]

BLAST of CmaCh03G013200 vs. NCBI nr
Match: XP_023543938.1 (dof zinc finger protein DOF1.5-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345.5 bits (885), Expect = 2.6e-91
Identity = 161/169 (95.27%), Postives = 165/169 (97.63%), Query Frame = 0


Query: 1   MAQVHGSATGGIKLFGTIIPLQTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCK 60
           MAQVHGSAT GIKLFGTIIPLQTRKVKDQPEKGGGGGG  +GDQTEMKRPEKIIPCPRCK
Sbjct: 1   MAQVHGSATAGIKLFGTIIPLQTRKVKDQPEKGGGGGG--EGDQTEMKRPEKIIPCPRCK 60

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEMP 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGE+P
Sbjct: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGELP 120

Query: 121 DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQY 170
           DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKR+KIIG +
Sbjct: 121 DDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRKKIIGLF 167

[Close]

BLAST of CmaCh03G013200 vs. NCBI nr
Match: XP_022926649.1 (dof zinc finger protein DOF1.5-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 326.2 bits (835), Expect = 1.7e-85
Identity = 153/174 (87.93%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MAQVHGSATGGIKLFGTIIPLQTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCK 60
           MA+VH S TGGIKLFGT+I LQTR +K++PEKGG GGG   GDQ EMKRPEKIIPCPRCK
Sbjct: 52  MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGG---GDQPEMKRPEKIIPCPRCK 111

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPP-PNCRTLSGEM 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPP PNCR LSGE+
Sbjct: 112 SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGEL 171

Query: 121 PDDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS 174
           P+DYGQLYDAASGIIHQLELDAVEGWHL VAEQDF QVFPLKRQKIIGQ+GQTS
Sbjct: 172 PEDYGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 222

[Close]

BLAST of CmaCh03G013200 vs. NCBI nr
Match: XP_022926650.1 (dof zinc finger protein DOF1.5-like isoform X2 [Cucurbita moschata] >KAG6594548.1 Dof zinc finger protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7026525.1 Dof zinc finger protein DOF1.5, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 326.2 bits (835), Expect = 1.7e-85
Identity = 153/174 (87.93%), Postives = 161/174 (92.53%), Query Frame = 0


Query: 1   MAQVHGSATGGIKLFGTIIPLQTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCK 60
           MA+VH S TGGIKLFGT+I LQTR +K++PEKGG GGG   GDQ EMKRPEKIIPCPRCK
Sbjct: 1   MAEVHCSNTGGIKLFGTVITLQTRSIKEEPEKGGDGGG---GDQPEMKRPEKIIPCPRCK 60

Query: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPP-PNCRTLSGEM 120
           SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPP PNCR LSGE+
Sbjct: 61  SMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPLPNCRILSGEL 120

Query: 121 PDDYGQLYDAASGIIHQLELDAVEGWHLAVAEQDFTQVFPLKRQKIIGQYGQTS 174
           P+DYGQLYDAASGIIHQLELDAVEGWHL VAEQDF QVFPLKRQKIIGQ+GQTS
Sbjct: 121 PEDYGQLYDAASGIIHQLELDAVEGWHLTVAEQDFAQVFPLKRQKIIGQHGQTS 171

[Close]

BLAST of CmaCh03G013200 vs. TAIR 10
Match: AT1G29160.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 164.5 bits (415), Expect = 7.8e-41
Identity = 88/166 (53.01%), Postives = 104/166 (62.65%), Query Frame = 0


Query: 11  GIKLFGTIIPL----------QTRKVKDQPE-KGGGGGGGADGDQTEMKRPEKIIPCPRC 70
           GIKLFG  I            + ++ + QPE +          D T  KRP+KIIPCPRC
Sbjct: 8   GIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDKIIPCPRC 67

Query: 71  KSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEM 130
           KSM+TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVP+GAGRR++KPP          
Sbjct: 68  KSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRV------- 127

Query: 131 PDDYGQLYDAASGIIHQLELDA--VEGWHLAVAEQ-DFTQVFPLKR 163
              + +L  AA+G + Q+ELDA  VE W  A A    F   FP+KR
Sbjct: 128 -GGFAELLGAATGAVDQVELDALLVEEWRAATASHGGFRHDFPVKR 165

[Close]

BLAST of CmaCh03G013200 vs. TAIR 10
Match: AT2G34140.1 (Dof-type zinc finger DNA-binding family protein )

HSP 1 Score: 155.6 bits (392), Expect = 3.6e-38
Identity = 86/164 (52.44%), Postives = 101/164 (61.59%), Query Frame = 0


Query: 11  GIKLFGTIIPLQTRKVKDQ-----PEKGG--GGGGGADGDQTEMKRPEKIIPCPRCKSMD 70
           GIKLFG  I   TR +K++     PE+         +  D T  KRP+KII CPRCKSM+
Sbjct: 8   GIKLFGKTIAFNTRTIKNEEETHPPEQEATIAVRSSSSSDLTAEKRPDKIIACPRCKSME 67

Query: 71  TKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAKPPPNCRTLSGEMPDDY 130
           TKFCYFNNYNVNQPRHFCKGC RYWTAGGALRNVP+GAGRR++KPP   R + G + D  
Sbjct: 68  TKFCYFNNYNVNQPRHFCKGCHRYWTAGGALRNVPVGAGRRKSKPPG--RVVVGMLGDGN 127

Query: 131 GQLYDAASGIIHQLELD---AVEGWH--LAVAEQDFTQVFPLKR 163
           G         + Q+EL     VE W    A A   F   FP+KR
Sbjct: 128 G---------VRQVELINGLLVEEWQHAAAAAHGSFRHDFPMKR 160

[Close]

BLAST of CmaCh03G013200 vs. TAIR 10
Match: AT5G39660.1 (cycling DOF factor 2 )

HSP 1 Score: 128.6 bits (322), Expect = 4.7e-30
Identity = 55/88 (62.50%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 22  QTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFC 81
           +T K     E+ GG     +G   ++K+P+KI+PCPRC SM+TKFCY+NNYNVNQPRHFC
Sbjct: 109 ETTKAAKTNEESGGTACSQEG---KLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFC 168

Query: 82  KGCQRYWTAGGALRNVPIGAGRRRAKPP 110
           K CQRYWTAGG +RNVP+GAGRR+ K P
Sbjct: 169 KKCQRYWTAGGTMRNVPVGAGRRKNKSP 193

[Close]

BLAST of CmaCh03G013200 vs. TAIR 10
Match: AT5G39660.2 (cycling DOF factor 2 )

HSP 1 Score: 128.6 bits (322), Expect = 4.7e-30
Identity = 55/88 (62.50%), Postives = 68/88 (77.27%), Query Frame = 0


Query: 22  QTRKVKDQPEKGGGGGGGADGDQTEMKRPEKIIPCPRCKSMDTKFCYFNNYNVNQPRHFC 81
           +T K     E+ GG     +G   ++K+P+KI+PCPRC SM+TKFCY+NNYNVNQPRHFC
Sbjct: 109 ETTKAAKTNEESGGTACSQEG---KLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFC 168

Query: 82  KGCQRYWTAGGALRNVPIGAGRRRAKPP 110
           K CQRYWTAGG +RNVP+GAGRR+ K P
Sbjct: 169 KKCQRYWTAGGTMRNVPVGAGRRKNKSP 193

[Close]

BLAST of CmaCh03G013200 vs. TAIR 10
Match: AT5G62430.1 (cycling DOF factor 1 )

HSP 1 Score: 127.5 bits (319), Expect = 1.1e-29
Identity = 59/99 (59.60%), Postives = 73/99 (73.74%), Query Frame = 0


Query: 12  IKLFGTIIPLQT-RKVKDQPEKGGGGGGGADGDQTE--MKRPEKIIPCPRCKSMDTKFCY 71
           IKLFG  IP  T  +V D+ E+        D  + +  +K+P KI+PCPRC SM+TKFCY
Sbjct: 9   IKLFGMKIPFPTVLEVADEEEEKNQNKTLTDQSEKDKTLKKPTKILPCPRCNSMETKFCY 68

Query: 72  FNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRRAK 108
           +NNYNVNQPRHFCK CQRYWT+GG +R+VPIGAGRR+ K
Sbjct: 69  YNNYNVNQPRHFCKACQRYWTSGGTMRSVPIGAGRRKNK 107

The following BLAST results are available for this feature:

BLAST of CmaCh03G013200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P68350	1.1e-39	53.01	Dof zinc finger protein DOF1.5 OS=Arabidopsis thaliana OX=3702 GN=DOF1.5 PE=1 SV...	[more]
O22967	5.1e-37	52.44	Cyclic dof factor 4 OS=Arabidopsis thaliana OX=3702 GN=CDF4 PE=2 SV=1	[more]
Q93ZL5	6.6e-29	62.50	Cyclic dof factor 2 OS=Arabidopsis thaliana OX=3702 GN=CDF2 PE=1 SV=2	[more]
Q8W1E3	1.5e-28	59.60	Cyclic dof factor 1 OS=Arabidopsis thaliana OX=3702 GN=CDF1 PE=1 SV=2	[more]
Q8LFV3	7.3e-28	75.38	Cyclic dof factor 3 OS=Arabidopsis thaliana OX=3702 GN=CDF3 PE=1 SV=2	[more]

BLAST of CmaCh03G013200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ILZ6	7.5e-100	100.00	dof zinc finger protein DOF1.5-like OS=Cucurbita maxima OX=3661 GN=LOC111478624 ...	[more]
A0A6J1EJ46	2.1e-94	95.95	dof zinc finger protein DOF1.5-like OS=Cucurbita moschata OX=3662 GN=LOC11143307...	[more]
A0A6J1ELQ8	8.0e-86	87.93	dof zinc finger protein DOF1.5-like isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1EFS0	8.0e-86	87.93	dof zinc finger protein DOF1.5-like isoform X1 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A5D3CPV7	1.8e-85	85.55	Dof zinc finger protein DOF1.5-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]

BLAST of CmaCh03G013200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978762.1	1.5e-99	100.00	dof zinc finger protein DOF1.5-like [Cucurbita maxima]	[more]
XP_022925765.1	4.3e-94	95.95	dof zinc finger protein DOF1.5-like [Cucurbita moschata] >KAG6581357.1 Dof zinc ...	[more]
XP_023543938.1	2.6e-91	95.27	dof zinc finger protein DOF1.5-like [Cucurbita pepo subsp. pepo]	[more]
XP_022926649.1	1.7e-85	87.93	dof zinc finger protein DOF1.5-like isoform X1 [Cucurbita moschata]	[more]
XP_022926650.1	1.7e-85	87.93	dof zinc finger protein DOF1.5-like isoform X2 [Cucurbita moschata] >KAG6594548....	[more]

BLAST of CmaCh03G013200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G29160.1	7.8e-41	53.01	Dof-type zinc finger DNA-binding family protein	[more]
AT2G34140.1	3.6e-38	52.44	Dof-type zinc finger DNA-binding family protein	[more]
AT5G39660.1	4.7e-30	62.50	cycling DOF factor 2	[more]
AT5G39660.2	4.7e-30	62.50	cycling DOF factor 2	[more]
AT5G62430.1	1.1e-29	59.60	cycling DOF factor 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 52..107 e-value: 1.2E-31 score: 108.7
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 56..92
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 54..108 score: 28.238934
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..47
None	No IPR available	PANTHER	PTHR31089:SF49	DOF ZINC FINGER PROTEIN DOF1.5-LIKE	coord: 7..166
None	No IPR available	PANTHER	PTHR31089	CYCLIC DOF FACTOR 2	coord: 7..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G013200.1	CmaCh03G013200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity