Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCGTTCCAGTGAAAAAGATTATGGAAGACGCACCGTGGACTCAAAAGCTTGAAGCCCTAACGCATATTCTGCTGTGCCCCACCACCGCTCCGCCGCTTGCGTCTCAGTTCTTCATCGCCACCAAGATCCCCTGCTACCTGAATTGGGACTACCCGCCGCTCCTCTGCTCCAAACCTTCTATTTTCCCCTTTCCCTCTCTTCACCTTCAATGGGGCTTCTCTCTGTTCCTCAAAAGACTCTCCCGATTGGGGCTCCCCATGACCTCTTGGCGATCCAAATGCCCTTATCAACTCCCCCCGCCGTTGCTTCTCGCTCGAGGCGTCGACGGCGCTCAGTGGGACGATGAACAGAGGAGAAACTACGTGAGAATGAGGCTGAGAAGAAAGCGTCTGGGCAGCGATGTCAACCCCTTAATCCCAATTATGATTCCCAATATGTTGCTGTTTTGTCTTCTGCTATGGAAGCCATTATCTTCCACTCATTAA
mRNA sequence
ATGTTCGTTCCAGTGAAAAAGATTATGGAAGACGCACCGTGGACTCAAAAGCTTGAAGCCCTAACGCATATTCTGCTGTGCCCCACCACCGCTCCGCCGCTTGCGTCTCAGTTCTTCATCGCCACCAAGATCCCCTGCTACCTGAATTGGGACTACCCGCCGCTCCTCTGCTCCAAACCTTCTATTTTCCCCTTTCCCTCTCTTCACCTTCAATGGGGCTTCTCTCTGTTCCTCAAAAGACTCTCCCGATTGGGGCTCCCCATGACCTCTTGGCGATCCAAATGCCCTTATCAACTCCCCCCGCCGTTGCTTCTCGCTCGAGGCGTCGACGGCGCTCAGTGGGACGATGAACAGAGGAGAAACTACGTGAGAATGAGGCTGAGAAGAAAGCGTCTGGGCAGCGATGTCAACCCCTTAATCCCAATTATGATTCCCAATATGTTGCTGTTTTGTCTTCTGCTATGGAAGCCATTATCTTCCACTCATTAA
Coding sequence (CDS)
ATGTTCGTTCCAGTGAAAAAGATTATGGAAGACGCACCGTGGACTCAAAAGCTTGAAGCCCTAACGCATATTCTGCTGTGCCCCACCACCGCTCCGCCGCTTGCGTCTCAGTTCTTCATCGCCACCAAGATCCCCTGCTACCTGAATTGGGACTACCCGCCGCTCCTCTGCTCCAAACCTTCTATTTTCCCCTTTCCCTCTCTTCACCTTCAATGGGGCTTCTCTCTGTTCCTCAAAAGACTCTCCCGATTGGGGCTCCCCATGACCTCTTGGCGATCCAAATGCCCTTATCAACTCCCCCCGCCGTTGCTTCTCGCTCGAGGCGTCGACGGCGCTCAGTGGGACGATGAACAGAGGAGAAACTACGTGAGAATGAGGCTGAGAAGAAAGCGTCTGGGCAGCGATGTCAACCCCTTAATCCCAATTATGATTCCCAATATGTTGCTGTTTTGTCTTCTGCTATGGAAGCCATTATCTTCCACTCATTAA
Protein sequence
MFVPVKKIMEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSLHLQWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRRNYVRMRLRRKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSSTH
Homology
BLAST of CmaCh03G012860 vs. ExPASy TrEMBL
Match:
A0A6J1IR68 (uncharacterized protein LOC111478635 OS=Cucurbita maxima OX=3661 GN=LOC111478635 PE=4 SV=1)
HSP 1 Score: 346.3 bits (887), Expect = 7.0e-92
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
Query: 1 MFVPVKKIMEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKP 60
MFVPVKKIMEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKP
Sbjct: 1 MFVPVKKIMEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKP 60
Query: 61 SIFPFPSLHLQWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRR 120
SIFPFPSLHLQWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRR
Sbjct: 61 SIFPFPSLHLQWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRR 120
Query: 121 NYVRMRLRRKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSSTH 163
NYVRMRLRRKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSSTH
Sbjct: 121 NYVRMRLRRKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSSTH 162
BLAST of CmaCh03G012860 vs. ExPASy TrEMBL
Match:
A0A0A0KK88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518100 PE=4 SV=1)
HSP 1 Score: 292.7 bits (748), Expect = 9.2e-76
Identity = 136/161 (84.47%), Postives = 146/161 (90.68%), Query Frame = 0
Query: 1 MFVPVKKIMEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKP 60
+ +P+K+ ME+APW QKL+ALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLC K
Sbjct: 4 ILLPMKETMEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKS 63
Query: 61 SIFPFPSLHLQWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRR 120
SIFPF SLHLQWGFSLFLK+LSR GLP TSWRSKCPYQLPPPL+LA+GV AQWDDEQR
Sbjct: 64 SIFPFLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRI 123
Query: 121 NYVRMRLRRKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSST 162
NY RMRLRRKRLGSDV+PLIPIMIPNMLLF LLLW P SST
Sbjct: 124 NYARMRLRRKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSST 164
BLAST of CmaCh03G012860 vs. ExPASy TrEMBL
Match:
A0A1S3B097 (uncharacterized protein LOC103484499 OS=Cucumis melo OX=3656 GN=LOC103484499 PE=4 SV=1)
HSP 1 Score: 288.1 bits (736), Expect = 2.3e-74
Identity = 134/161 (83.23%), Postives = 144/161 (89.44%), Query Frame = 0
Query: 1 MFVPVKKIMEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKP 60
+ + +KK ME+ PW+QKL+ALTHILLCP TAPPLASQFFIATKIPCYLNWDYPPLLC K
Sbjct: 4 ILLSMKKTMEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKS 63
Query: 61 SIFPFPSLHLQWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRR 120
SIFPF SLHLQWGFSLFLK+LSR GLP TSWRSKCPYQLPPPL+LA+GV AQWDDEQR
Sbjct: 64 SIFPFLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRI 123
Query: 121 NYVRMRLRRKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSST 162
NY RMRLRRKRLGSDV+PLIPIMIPNMLLF LLLW P SST
Sbjct: 124 NYARMRLRRKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSST 164
BLAST of CmaCh03G012860 vs. ExPASy TrEMBL
Match:
A0A6J1EGM1 (uncharacterized protein LOC111433914 OS=Cucurbita moschata OX=3662 GN=LOC111433914 PE=4 SV=1)
HSP 1 Score: 286.6 bits (732), Expect = 6.6e-74
Identity = 131/153 (85.62%), Postives = 141/153 (92.16%), Query Frame = 0
Query: 9 MEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 68
ME++PW QKL+ LTHILLCPTTAPPLASQ+F+ATKIPCYLNWDYPPLLC KPSIFPFPSL
Sbjct: 1 MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFPSL 60
Query: 69 HLQWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRRNYVRMRLR 128
HLQWGFSLFLKRLSR LP TSWRSKCP+Q PPPL+LA+GVD AQW DEQRR YVRMRLR
Sbjct: 61 HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120
Query: 129 RKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSST 162
RKRLGSDV+PLIPI+IPNMLLF LLLW PLSST
Sbjct: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSST 153
BLAST of CmaCh03G012860 vs. ExPASy TrEMBL
Match:
A0A5A7UDV0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007700 PE=4 SV=1)
HSP 1 Score: 283.9 bits (725), Expect = 4.3e-73
Identity = 132/153 (86.27%), Postives = 139/153 (90.85%), Query Frame = 0
Query: 9 MEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 68
ME+ PW+QKL+ALTHILLCP TAPPLASQFFIATKIPCYLNWDYPPLLC K SIFPF SL
Sbjct: 1 MEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKSSIFPFLSL 60
Query: 69 HLQWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRRNYVRMRLR 128
HLQWGFSLFLK+LSR GLP TSWRSKCPYQLPPPL+LA+GV AQWDDEQR NY RMRLR
Sbjct: 61 HLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRINYARMRLR 120
Query: 129 RKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSST 162
RKRLGSDV+PLIPIMIPNMLLF LLLW P SST
Sbjct: 121 RKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSST 153
BLAST of CmaCh03G012860 vs. NCBI nr
Match:
XP_022978775.1 (uncharacterized protein LOC111478635 [Cucurbita maxima])
HSP 1 Score: 346.3 bits (887), Expect = 1.4e-91
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
Query: 1 MFVPVKKIMEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKP 60
MFVPVKKIMEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKP
Sbjct: 1 MFVPVKKIMEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKP 60
Query: 61 SIFPFPSLHLQWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRR 120
SIFPFPSLHLQWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRR
Sbjct: 61 SIFPFPSLHLQWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRR 120
Query: 121 NYVRMRLRRKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSSTH 163
NYVRMRLRRKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSSTH
Sbjct: 121 NYVRMRLRRKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSSTH 162
BLAST of CmaCh03G012860 vs. NCBI nr
Match:
KAG6604466.1 (hypothetical protein SDJN03_05075, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034610.1 hypothetical protein SDJN02_04340, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 320.5 bits (820), Expect = 8.5e-84
Identity = 148/154 (96.10%), Postives = 152/154 (98.70%), Query Frame = 0
Query: 9 MEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 68
MEDAPWT+KLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL
Sbjct: 1 MEDAPWTEKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 60
Query: 69 HLQWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRRNYVRMRLR 128
HLQWGFSLFLKRLSRLGLP+TSWRSKCPYQLPPPLLLA+GVD AQWDDEQRR YVR+RLR
Sbjct: 61 HLQWGFSLFLKRLSRLGLPVTSWRSKCPYQLPPPLLLAQGVDAAQWDDEQRRKYVRIRLR 120
Query: 129 RKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSSTH 163
RKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSSTH
Sbjct: 121 RKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSSTH 154
BLAST of CmaCh03G012860 vs. NCBI nr
Match:
XP_004134687.2 (uncharacterized protein LOC101221431 [Cucumis sativus])
HSP 1 Score: 292.7 bits (748), Expect = 1.9e-75
Identity = 136/161 (84.47%), Postives = 146/161 (90.68%), Query Frame = 0
Query: 1 MFVPVKKIMEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKP 60
+ +P+K+ ME+APW QKL+ALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLC K
Sbjct: 4 ILLPMKETMEEAPWPQKLQALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCPKS 63
Query: 61 SIFPFPSLHLQWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRR 120
SIFPF SLHLQWGFSLFLK+LSR GLP TSWRSKCPYQLPPPL+LA+GV AQWDDEQR
Sbjct: 64 SIFPFLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRI 123
Query: 121 NYVRMRLRRKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSST 162
NY RMRLRRKRLGSDV+PLIPIMIPNMLLF LLLW P SST
Sbjct: 124 NYARMRLRRKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSST 164
BLAST of CmaCh03G012860 vs. NCBI nr
Match:
XP_008439813.1 (PREDICTED: uncharacterized protein LOC103484499 [Cucumis melo])
HSP 1 Score: 288.1 bits (736), Expect = 4.7e-74
Identity = 134/161 (83.23%), Postives = 144/161 (89.44%), Query Frame = 0
Query: 1 MFVPVKKIMEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKP 60
+ + +KK ME+ PW+QKL+ALTHILLCP TAPPLASQFFIATKIPCYLNWDYPPLLC K
Sbjct: 4 ILLSMKKTMEETPWSQKLQALTHILLCPDTAPPLASQFFIATKIPCYLNWDYPPLLCPKS 63
Query: 61 SIFPFPSLHLQWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRR 120
SIFPF SLHLQWGFSLFLK+LSR GLP TSWRSKCPYQLPPPL+LA+GV AQWDDEQR
Sbjct: 64 SIFPFLSLHLQWGFSLFLKKLSRFGLPKTSWRSKCPYQLPPPLILAKGVHPAQWDDEQRI 123
Query: 121 NYVRMRLRRKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSST 162
NY RMRLRRKRLGSDV+PLIPIMIPNMLLF LLLW P SST
Sbjct: 124 NYARMRLRRKRLGSDVHPLIPIMIPNMLLFTLLLWNPFSST 164
BLAST of CmaCh03G012860 vs. NCBI nr
Match:
XP_022926954.1 (uncharacterized protein LOC111433914 [Cucurbita moschata])
HSP 1 Score: 286.6 bits (732), Expect = 1.4e-73
Identity = 131/153 (85.62%), Postives = 141/153 (92.16%), Query Frame = 0
Query: 9 MEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 68
ME++PW QKL+ LTHILLCPTTAPPLASQ+F+ATKIPCYLNWDYPPLLC KPSIFPFPSL
Sbjct: 1 MEESPWPQKLQVLTHILLCPTTAPPLASQYFVATKIPCYLNWDYPPLLCPKPSIFPFPSL 60
Query: 69 HLQWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRRNYVRMRLR 128
HLQWGFSLFLKRLSR LP TSWRSKCP+Q PPPL+LA+GVD AQW DEQRR YVRMRLR
Sbjct: 61 HLQWGFSLFLKRLSRFALPKTSWRSKCPFQHPPPLILAKGVDPAQWGDEQRRTYVRMRLR 120
Query: 129 RKRLGSDVNPLIPIMIPNMLLFCLLLWKPLSST 162
RKRLGSDV+PLIPI+IPNMLLF LLLW PLSST
Sbjct: 121 RKRLGSDVHPLIPIIIPNMLLFSLLLWNPLSST 153
BLAST of CmaCh03G012860 vs. TAIR 10
Match:
AT2G33855.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )
HSP 1 Score: 165.6 bits (418), Expect = 3.3e-41
Identity = 81/151 (53.64%), Postives = 102/151 (67.55%), Query Frame = 0
Query: 9 MEDAPWTQKLEALTHILLCPTTAPPLASQFFIATKIPCYLNWDYPPLLCSKPSIFPFPSL 68
ME+ W Q+++A+THIL PTT P L SQFFI IP Y++WDYPP+ +
Sbjct: 1 MEETTWGQRIQAVTHILTNPTTKPSLYSQFFIGAIIPNYVSWDYPPV---------YSPT 60
Query: 69 HL-QWGFSLFLKRLSRLGLPMTSWRSKCPYQLPPPLLLARGVDGAQWDDEQRRNYVRMRL 128
HL QW S F KR+SR GLP TSWRS PY PP ++A GV+ +W E+RR Y R RL
Sbjct: 61 HLRQWWVSQFFKRVSRFGLPDTSWRSNSPYYQPPAAVMAVGVEEGKWGKEERREYARKRL 120
Query: 129 RRKRLGSDVNPLIPIMIPNMLLFCLLLWKPL 159
RRKRL ++VNP IP+++PN+LLF LLLW PL
Sbjct: 121 RRKRLVNEVNPYIPLLVPNLLLFTLLLWDPL 142
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1IR68 | 7.0e-92 | 100.00 | uncharacterized protein LOC111478635 OS=Cucurbita maxima OX=3661 GN=LOC111478635... | [more] |
A0A0A0KK88 | 9.2e-76 | 84.47 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518100 PE=4 SV=1 | [more] |
A0A1S3B097 | 2.3e-74 | 83.23 | uncharacterized protein LOC103484499 OS=Cucumis melo OX=3656 GN=LOC103484499 PE=... | [more] |
A0A6J1EGM1 | 6.6e-74 | 85.62 | uncharacterized protein LOC111433914 OS=Cucurbita moschata OX=3662 GN=LOC1114339... | [more] |
A0A5A7UDV0 | 4.3e-73 | 86.27 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
XP_022978775.1 | 1.4e-91 | 100.00 | uncharacterized protein LOC111478635 [Cucurbita maxima] | [more] |
KAG6604466.1 | 8.5e-84 | 96.10 | hypothetical protein SDJN03_05075, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_004134687.2 | 1.9e-75 | 84.47 | uncharacterized protein LOC101221431 [Cucumis sativus] | [more] |
XP_008439813.1 | 4.7e-74 | 83.23 | PREDICTED: uncharacterized protein LOC103484499 [Cucumis melo] | [more] |
XP_022926954.1 | 1.4e-73 | 85.62 | uncharacterized protein LOC111433914 [Cucurbita moschata] | [more] |
Match Name | E-value | Identity | Description | |
AT2G33855.1 | 3.3e-41 | 53.64 | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ... | [more] |