CmaCh03G012610 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G012610
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	E3 ubiquitin-protein ligase RMA1H1-like
Location	Cma_Chr03: 8280308 .. 8280988 (-)
RNA-Seq Expression	CmaCh03G012610
Synteny	CmaCh03G012610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCTATGAGCAGTACTTTGTGCAAGGATGGAAACACTACAACGGTTGCTTTGATTGTAACATCTGCTTTGACTTTGCCCATGAGCCAGTGGTAACTCTCTGCGGCCACTTATACTGCTGGCCTTGCATCTACAAATGGCTTCACGTCCAGAGTGCCTCTCTTGCCATTGACGAGCACCCACAGTGCCCGGTTTGCAAGGCTGATATTTCCCACACCACAATGGTTCCTCTCTACGGTTGTGGCCGAACGGCCGAGCAAGTCGAGCCTGAAGCTAAAGCAATGCATCGTGACATTGATATACCTCCTAGACCTTCAGCTTGTGGTAACCAGATGCTTGCTACTCCCAGCACACACCAGCAGCAACTTCCATATCGAAATCCTTACCAGCGACCGAACCACGACCCCGTTCTTTTTGGGAATTATGAAGAAGATTCAGCAGCCTCTTTGCTAAACCTTGGGAGAACATCATTCAGTGGATTTGACCATCGGGTGGCAGGAATGATTGGCAATTTCGTGTATGCGAGGGTCTTTGGGAACTCAGACAACTTAAACTCTTACTTGGGAACAGGGAGCAGAAGGGATGGGTTGAGAAGACATGAAATGCAGGTAGCCAAGTCATTGAACAGAATCTCCATTTTCCTGTTCTGCTGTGTAATTCTATGCGTTCTTGTCTTCTAA

mRNA sequence

ATGGCCTATGAGCAGTACTTTGTGCAAGGATGGAAACACTACAACGGTTGCTTTGATTGTAACATCTGCTTTGACTTTGCCCATGAGCCAGTGGTAACTCTCTGCGGCCACTTATACTGCTGGCCTTGCATCTACAAATGGCTTCACGTCCAGAGTGCCTCTCTTGCCATTGACGAGCACCCACAGTGCCCGGTTTGCAAGGCTGATATTTCCCACACCACAATGGTTCCTCTCTACGGTTGTGGCCGAACGGCCGAGCAAGTCGAGCCTGAAGCTAAAGCAATGCATCGTGACATTGATATACCTCCTAGACCTTCAGCTTGTGGTAACCAGATGCTTGCTACTCCCAGCACACACCAGCAGCAACTTCCATATCGAAATCCTTACCAGCGACCGAACCACGACCCCGTTCTTTTTGGGAATTATGAAGAAGATTCAGCAGCCTCTTTGCTAAACCTTGGGAGAACATCATTCAGTGGATTTGACCATCGGGTGGCAGGAATGATTGGCAATTTCGTGTATGCGAGGGTCTTTGGGAACTCAGACAACTTAAACTCTTACTTGGGAACAGGGAGCAGAAGGGATGGGTTGAGAAGACATGAAATGCAGGTAGCCAAGTCATTGAACAGAATCTCCATTTTCCTGTTCTGCTGTGTAATTCTATGCGTTCTTGTCTTCTAA

Coding sequence (CDS)

ATGGCCTATGAGCAGTACTTTGTGCAAGGATGGAAACACTACAACGGTTGCTTTGATTGTAACATCTGCTTTGACTTTGCCCATGAGCCAGTGGTAACTCTCTGCGGCCACTTATACTGCTGGCCTTGCATCTACAAATGGCTTCACGTCCAGAGTGCCTCTCTTGCCATTGACGAGCACCCACAGTGCCCGGTTTGCAAGGCTGATATTTCCCACACCACAATGGTTCCTCTCTACGGTTGTGGCCGAACGGCCGAGCAAGTCGAGCCTGAAGCTAAAGCAATGCATCGTGACATTGATATACCTCCTAGACCTTCAGCTTGTGGTAACCAGATGCTTGCTACTCCCAGCACACACCAGCAGCAACTTCCATATCGAAATCCTTACCAGCGACCGAACCACGACCCCGTTCTTTTTGGGAATTATGAAGAAGATTCAGCAGCCTCTTTGCTAAACCTTGGGAGAACATCATTCAGTGGATTTGACCATCGGGTGGCAGGAATGATTGGCAATTTCGTGTATGCGAGGGTCTTTGGGAACTCAGACAACTTAAACTCTTACTTGGGAACAGGGAGCAGAAGGGATGGGTTGAGAAGACATGAAATGCAGGTAGCCAAGTCATTGAACAGAATCTCCATTTTCCTGTTCTGCTGTGTAATTCTATGCGTTCTTGTCTTCTAA

Protein sequence

MAYEQYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCPVCKADISHTTMVPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNLNSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF

Homology

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BLAST of CmaCh03G012610 vs. ExPASy Swiss-Prot
Match: Q6R567 (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 2.9e-40
Identity = 97/228 (42.54%), Postives = 132/228 (57.89%), Query Frame = 0


Query: 12  KHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASL--AIDEHPQCPVCKAD 71
           ++ +G FDCNIC D  HEPV+TLCGHLYCWPCIYKW++ QS S   +  + PQCPVCKA+
Sbjct: 33  ENISGGFDCNICLDCVHEPVITLCGHLYCWPCIYKWIYFQSVSSENSDQQQPQCPVCKAE 92

Query: 72  ISHTTMVPLYGCGRTAEQVEP-EAKAMHRDIDIPPRPSA--CGNQ-MLATPSTHQQQLPY 131
           +S  T++PLY  GR  +  +P E KA +  I IP RP +  CG   +L T  ++  QL  
Sbjct: 93  VSEKTLIPLY--GRGGQSTKPSEGKAPNLGIVIPQRPPSPRCGGHFLLPTTDSNPSQLLQ 152

Query: 132 RNPYQRPN--HDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDN 191
           R  YQ+ +    P   G+Y    ++ +L+ G  + +   H    MIG   YAR+FGNS  
Sbjct: 153 RRGYQQQSQTRQPAYQGSY---MSSPMLSPGGATANMLQH---SMIGEVAYARIFGNSST 212

Query: 192 L-----NSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 227
                 NSY    S    +RR   Q  +SL RI  FLFCC + C+++F
Sbjct: 213 TMYTYPNSYNLAISSSPRMRRQLSQADRSLGRICFFLFCCFVTCLILF 252

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BLAST of CmaCh03G012610 vs. ExPASy Swiss-Prot
Match: Q8GUK7 (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.9e-40
Identity = 96/226 (42.48%), Postives = 130/226 (57.52%), Query Frame = 0


Query: 10  GWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHP-QCPVCKA 69
           G  + +GCFDCNIC D AH+PVVTLCGHL+CWPCIYKWLHVQ +S+++D+H   CPVCK+
Sbjct: 34  GQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKS 93

Query: 70  DISHTTMVPLYGCGRTAEQVEPEAK---AMHRDIDIPPRPSACGNQMLATPS-----THQ 129
           +I+ T++VPLYG G ++      +K   A+  DI   P PSA  N + +  S      HQ
Sbjct: 94  NITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPSLQHQ 153

Query: 130 QQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN 189
              P  + +Q   + P  F   E    A+ + +       F + V GM G+ VY R+FG 
Sbjct: 154 TLSPSFHNHQ---YSPRGFTTTESTDLANAVMM------SFLYPVIGMFGDLVYTRIFGT 213

Query: 190 SDNLNSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 227
             N  +      R        MQ  KSLNR+SIF  CC+ILC+L+F
Sbjct: 214 FTNTIAQPYQSQRM-------MQREKSLNRVSIFFLCCIILCLLLF 243

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BLAST of CmaCh03G012610 vs. ExPASy Swiss-Prot
Match: O64425 (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.6e-33
Identity = 84/216 (38.89%), Postives = 114/216 (52.78%), Query Frame = 0


Query: 18  FDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA--IDEHPQCPVCKADISHTTM 77
           FDCNIC D   EPVVTLCGHL+CWPCI+KWL VQS S +     H QCPVCK+ +SH+T+
Sbjct: 46  FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTL 105

Query: 78  VPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLPYRNPYQRPNHD 137
           VPLYG GR   Q E +     R +    R     +   +T     Q++ + +P +     
Sbjct: 106 VPLYGRGRCTTQEEGKNSVPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQE----- 165

Query: 138 PVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN--SDNL---NSYLGT 197
               G Y     + +++    S+S     V  M+G  V  R+FG    D     ++Y   
Sbjct: 166 ----GYY---PVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLA 225

Query: 198 GSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 227
           G+    +RR  MQ  KSL RI  F  CCV+LC+L+F
Sbjct: 226 GTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

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BLAST of CmaCh03G012610 vs. ExPASy Swiss-Prot
Match: P93030 (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.4e-25
Identity = 73/219 (33.33%), Postives = 107/219 (48.86%), Query Frame = 0


Query: 16  GCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSAS-LAIDEH------PQCPVCKA 75
           G FDCNIC D   +PVVTLCGHL+CWPCI+KW +  + S   +D++      P+CPVCK+
Sbjct: 17  GDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKS 76

Query: 76  DISHTTMVPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLPYRNP 135
           D+S  T+VP+YG G+         KA     ++P RP+     +        +    R  
Sbjct: 77  DVSEATLVPIYGRGQ---------KAPQSGSNVPSRPTGPVYDLRGVGQRLGEGESQRYM 136

Query: 136 YQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFG-NSDNLNSY 195
           Y+ P  DPV+                            G++   VY R+FG +S N+  Y
Sbjct: 137 YRMP--DPVM----------------------------GVVCEMVYRRLFGESSSNMAPY 193

Query: 196 LGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 227
                R    RR  MQ  +SL+R+ +FL C + +C+ +F
Sbjct: 197 RDMNVRS---RRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

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BLAST of CmaCh03G012610 vs. ExPASy Swiss-Prot
Match: Q99942 (E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens OX=9606 GN=RNF5 PE=1 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 9.9e-17
Identity = 42/88 (47.73%), Postives = 53/88 (60.23%), Query Frame = 0


Query: 18  FDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCPVCKADISHTTMVP 77
           F+CNIC + A E VV++CGHLYCWPC+++WL  +       E  +CPVCKA IS   +VP
Sbjct: 25  FECNICLETAREAVVSVCGHLYCWPCLHQWLETR------PERQECPVCKAGISREKVVP 84

Query: 78  LYGCGRTAEQVEPEAKAMHRDIDIPPRP 106
           LYG G    Q +P  K        PPRP
Sbjct: 85  LYGRGSQKPQ-DPRLKT-------PPRP 98

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BLAST of CmaCh03G012610 vs. ExPASy TrEMBL
Match: A0A6J1IPM2 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita maxima OX=3661 GN=LOC111478794 PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 6.1e-134
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MAYEQYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEH 60
           MAYEQYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEH
Sbjct: 1   MAYEQYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEH 60

Query: 61  PQCPVCKADISHTTMVPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQ 120
           PQCPVCKADISHTTMVPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQ
Sbjct: 61  PQCPVCKADISHTTMVPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQ 120

Query: 121 QQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN 180
           QQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN
Sbjct: 121 QQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN 180

Query: 181 SDNLNSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 227
           SDNLNSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF
Sbjct: 181 SDNLNSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 226

[Close]

BLAST of CmaCh03G012610 vs. ExPASy TrEMBL
Match: A0A6J1ED53 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita moschata OX=3662 GN=LOC111433091 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 1.3e-131
Identity = 224/226 (99.12%), Postives = 224/226 (99.12%), Query Frame = 0


Query: 1   MAYEQYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEH 60
           MAYEQYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEH
Sbjct: 1   MAYEQYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEH 60

Query: 61  PQCPVCKADISHTTMVPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQ 120
           PQCPVCKADISHTTMVPLYG GRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQ
Sbjct: 61  PQCPVCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQ 120

Query: 121 QQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN 180
           QQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN
Sbjct: 121 QQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN 180

Query: 181 SDNLNSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 227
           SDNLNSYLGTGSRRDGLRR EMQVAKSLNRISIFLFCCVILCVLVF
Sbjct: 181 SDNLNSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 226

[Close]

BLAST of CmaCh03G012610 vs. ExPASy TrEMBL
Match: A0A0A0KK60 (Rnf5 OS=Cucumis sativus OX=3659 GN=Csa_6G517320 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 7.2e-111
Identity = 197/238 (82.77%), Postives = 207/238 (86.97%), Query Frame = 0


Query: 1   MAYEQYFVQGWKH--------YNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQS 60
           MA+EQYF QGWKH        Y GCFDCNIC DFAHEPVVTLCGHLYCWPCIYKWLHVQS
Sbjct: 1   MAFEQYFAQGWKHVSGTERENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQS 60

Query: 61  ASLAIDEHPQCPVCKADISHTTMVPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQM 120
           ASLAIDEHPQCPVCKADISHTTMVPLYG G+TAE+VEPE KAMH DI+IPPRPSACGNQ+
Sbjct: 61  ASLAIDEHPQCPVCKADISHTTMVPLYGRGQTAEEVEPEDKAMHHDINIPPRPSACGNQI 120

Query: 121 LATPSTHQQQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNF 180
           LATPSTHQQQLPYRNPYQRPNHDP+LF NYEEDSA+ LLNL RTSFS F H V GMIG+F
Sbjct: 121 LATPSTHQQQLPYRNPYQRPNHDPLLFANYEEDSASPLLNLARTSFSSFHHPVVGMIGDF 180

Query: 181 VYARVFGNSDNL----NSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 227
           V+ARVFGNSDNL    NSY  TGS R+ LRR EMQV KSLNRISIFLFCCVILCVLVF
Sbjct: 181 VHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVLVF 238

[Close]

BLAST of CmaCh03G012610 vs. ExPASy TrEMBL
Match: A0A5A7UGP7 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007450 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 3.9e-109
Identity = 195/238 (81.93%), Postives = 206/238 (86.55%), Query Frame = 0


Query: 1   MAYEQYFVQGWKH--------YNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQS 60
           MA++QYF QGWKH        Y GCFDCNIC DFAHEPVVTLCGHLYCWPCIYKWLHVQS
Sbjct: 1   MAFDQYFAQGWKHVSGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQS 60

Query: 61  ASLAIDEHPQCPVCKADISHTTMVPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQM 120
           ASLAIDEHPQCPVCKADISHTTMVPLYG G+ AE+VE EAKAMHRDI+IPPRPSACGNQ+
Sbjct: 61  ASLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVELEAKAMHRDINIPPRPSACGNQI 120

Query: 121 LATPSTHQQQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNF 180
           LATPSTHQQQLPYRNPYQRPNHDP+LF NYEE SA+ LLNL RTSFS F H V GMIG+F
Sbjct: 121 LATPSTHQQQLPYRNPYQRPNHDPLLFANYEEHSASPLLNLARTSFSSFHHPVVGMIGDF 180

Query: 181 VYARVFGNSDNL----NSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 227
           V+ARVFGNSDNL    NSY  TGS R+ LRR EMQV KSLNRISIFLFCCVILCVLVF
Sbjct: 181 VHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVLVF 238

[Close]

BLAST of CmaCh03G012610 vs. ExPASy TrEMBL
Match: A0A1S3AZB8 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo OX=3656 GN=LOC103484523 PE=4 SV=1)

HSP 1 Score: 404.1 bits (1037), Expect = 3.9e-109
Identity = 195/238 (81.93%), Postives = 206/238 (86.55%), Query Frame = 0


Query: 1   MAYEQYFVQGWKH--------YNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQS 60
           MA++QYF QGWKH        Y GCFDCNIC DFAHEPVVTLCGHLYCWPCIYKWLHVQS
Sbjct: 1   MAFDQYFAQGWKHVSGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLHVQS 60

Query: 61  ASLAIDEHPQCPVCKADISHTTMVPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQM 120
           ASLAIDEHPQCPVCKADISHTTMVPLYG G+ AE+VE EAKAMHRDI+IPPRPSACGNQ+
Sbjct: 61  ASLAIDEHPQCPVCKADISHTTMVPLYGRGQMAEEVELEAKAMHRDINIPPRPSACGNQI 120

Query: 121 LATPSTHQQQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNF 180
           LATPSTHQQQLPYRNPYQRPNHDP+LF NYEE SA+ LLNL RTSFS F H V GMIG+F
Sbjct: 121 LATPSTHQQQLPYRNPYQRPNHDPLLFANYEEHSASPLLNLARTSFSSFHHPVVGMIGDF 180

Query: 181 VYARVFGNSDNL----NSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 227
           V+ARVFGNSDNL    NSY  TGS R+ LRR EMQV KSLNRISIFLFCCVILCVLVF
Sbjct: 181 VHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVLVF 238

[Close]

BLAST of CmaCh03G012610 vs. NCBI nr
Match: XP_022979030.1 (E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima] >XP_022979031.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima])

HSP 1 Score: 486.5 bits (1251), Expect = 1.2e-133
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MAYEQYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEH 60
           MAYEQYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEH
Sbjct: 1   MAYEQYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEH 60

Query: 61  PQCPVCKADISHTTMVPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQ 120
           PQCPVCKADISHTTMVPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQ
Sbjct: 61  PQCPVCKADISHTTMVPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQ 120

Query: 121 QQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN 180
           QQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN
Sbjct: 121 QQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN 180

Query: 181 SDNLNSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 227
           SDNLNSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF
Sbjct: 181 SDNLNSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 226

[Close]

BLAST of CmaCh03G012610 vs. NCBI nr
Match: XP_022925786.1 (E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita moschata] >XP_022925787.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita moschata])

HSP 1 Score: 478.8 bits (1231), Expect = 2.6e-131
Identity = 224/226 (99.12%), Postives = 224/226 (99.12%), Query Frame = 0


Query: 1   MAYEQYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEH 60
           MAYEQYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEH
Sbjct: 1   MAYEQYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEH 60

Query: 61  PQCPVCKADISHTTMVPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQ 120
           PQCPVCKADISHTTMVPLYG GRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQ
Sbjct: 61  PQCPVCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQ 120

Query: 121 QQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN 180
           QQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN
Sbjct: 121 QQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN 180

Query: 181 SDNLNSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 227
           SDNLNSYLGTGSRRDGLRR EMQVAKSLNRISIFLFCCVILCVLVF
Sbjct: 181 SDNLNSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 226

[Close]

BLAST of CmaCh03G012610 vs. NCBI nr
Match: XP_023543343.1 (E3 ubiquitin-protein ligase RMA3-like [Cucurbita pepo subsp. pepo] >XP_023543345.1 E3 ubiquitin-protein ligase RMA3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 477.2 bits (1227), Expect = 7.6e-131
Identity = 223/226 (98.67%), Postives = 224/226 (99.12%), Query Frame = 0


Query: 1   MAYEQYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEH 60
           MAYEQYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHL+CWPCIYKWLHVQSASLAIDEH
Sbjct: 1   MAYEQYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLFCWPCIYKWLHVQSASLAIDEH 60

Query: 61  PQCPVCKADISHTTMVPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQ 120
           PQCPVCKADISHTTMVPLYG GRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQ
Sbjct: 61  PQCPVCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQ 120

Query: 121 QQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN 180
           QQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN
Sbjct: 121 QQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN 180

Query: 181 SDNLNSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 227
           SDNLNSYLGTGSRRDGLRR EMQVAKSLNRISIFLFCCVILCVLVF
Sbjct: 181 SDNLNSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 226

[Close]

BLAST of CmaCh03G012610 vs. NCBI nr
Match: KAG7034591.1 (E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 468.4 bits (1204), Expect = 3.5e-128
Identity = 219/222 (98.65%), Postives = 220/222 (99.10%), Query Frame = 0


Query: 5   QYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCP 64
           QYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCP
Sbjct: 41  QYFVQGWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCP 100

Query: 65  VCKADISHTTMVPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLP 124
           VCKADISHTTMVPLYG GRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLP
Sbjct: 101 VCKADISHTTMVPLYGRGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLP 160

Query: 125 YRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNL 184
           YRNPYQRPNHDPVLFGN+EEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNL
Sbjct: 161 YRNPYQRPNHDPVLFGNHEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGNSDNL 220

Query: 185 NSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 227
           NSYLGTGSRRDGLRR EMQVAKSLNRISIFLFCCVILCVLVF
Sbjct: 221 NSYLGTGSRRDGLRRQEMQVAKSLNRISIFLFCCVILCVLVF 262

[Close]

BLAST of CmaCh03G012610 vs. NCBI nr
Match: XP_038881993.1 (E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881994.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881995.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881996.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881997.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881998.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida])

HSP 1 Score: 413.3 bits (1061), Expect = 1.3e-111
Identity = 199/241 (82.57%), Postives = 209/241 (86.72%), Query Frame = 0


Query: 1   MAYEQYFVQGWKH-----------YNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLH 60
           MA+EQYF QGWKH           Y GCFDCNIC DFAHEPVVTLCGHLYCWPCIYKWLH
Sbjct: 1   MAFEQYFAQGWKHVSGTGGTDRENYKGCFDCNICLDFAHEPVVTLCGHLYCWPCIYKWLH 60

Query: 61  VQSASLAIDEHPQCPVCKADISHTTMVPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACG 120
           VQSASLAIDEHPQCPVCKADISHTTMVPLYG G+TAE+VEPEAKAMH DI+IPPRPSACG
Sbjct: 61  VQSASLAIDEHPQCPVCKADISHTTMVPLYGRGQTAEEVEPEAKAMHHDINIPPRPSACG 120

Query: 121 NQMLATPSTHQQQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMI 180
           NQMLATPS HQQQLPYRNPYQ+PNHDP+LFGNYEEDSAA LLNL RTSFSGF H + GMI
Sbjct: 121 NQMLATPSIHQQQLPYRNPYQQPNHDPLLFGNYEEDSAAPLLNLARTSFSGFHHPLVGMI 180

Query: 181 GNFVYARVFGNSDNL----NSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLV 227
           G+FV+ARVFGNSDNL    NSY  TGS R+ LRR EMQV KSLNRISIFLFCCVILCVLV
Sbjct: 181 GDFVHARVFGNSDNLYSYRNSYQLTGSSRNRLRRQEMQVDKSLNRISIFLFCCVILCVLV 240

[Close]

BLAST of CmaCh03G012610 vs. TAIR 10
Match: AT4G27470.1 (RING membrane-anchor 3 )

HSP 1 Score: 166.0 bits (419), Expect = 3.5e-41
Identity = 96/226 (42.48%), Postives = 130/226 (57.52%), Query Frame = 0


Query: 10  GWKHYNGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHP-QCPVCKA 69
           G  + +GCFDCNIC D AH+PVVTLCGHL+CWPCIYKWLHVQ +S+++D+H   CPVCK+
Sbjct: 34  GQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVSVDQHQNNCPVCKS 93

Query: 70  DISHTTMVPLYGCGRTAEQVEPEAK---AMHRDIDIPPRPSACGNQMLATPS-----THQ 129
           +I+ T++VPLYG G ++      +K   A+  DI   P PSA  N + +  S      HQ
Sbjct: 94  NITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPSLQHQ 153

Query: 130 QQLPYRNPYQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN 189
              P  + +Q   + P  F   E    A+ + +       F + V GM G+ VY R+FG 
Sbjct: 154 TLSPSFHNHQ---YSPRGFTTTESTDLANAVMM------SFLYPVIGMFGDLVYTRIFGT 213

Query: 190 SDNLNSYLGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 227
             N  +      R        MQ  KSLNR+SIF  CC+ILC+L+F
Sbjct: 214 FTNTIAQPYQSQRM-------MQREKSLNRVSIFFLCCIILCLLLF 243

[Close]

BLAST of CmaCh03G012610 vs. TAIR 10
Match: AT4G03510.1 (RING membrane-anchor 1 )

HSP 1 Score: 142.1 bits (357), Expect = 5.4e-34
Identity = 84/216 (38.89%), Postives = 114/216 (52.78%), Query Frame = 0


Query: 18  FDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA--IDEHPQCPVCKADISHTTM 77
           FDCNIC D   EPVVTLCGHL+CWPCI+KWL VQS S +     H QCPVCK+ +SH+T+
Sbjct: 46  FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTL 105

Query: 78  VPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLPYRNPYQRPNHD 137
           VPLYG GR   Q E +     R +    R     +   +T     Q++ + +P +     
Sbjct: 106 VPLYGRGRCTTQEEGKNSVPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQE----- 165

Query: 138 PVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN--SDNL---NSYLGT 197
               G Y     + +++    S+S     V  M+G  V  R+FG    D     ++Y   
Sbjct: 166 ----GYY---PVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLA 225

Query: 198 GSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 227
           G+    +RR  MQ  KSL RI  F  CCV+LC+L+F
Sbjct: 226 GTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of CmaCh03G012610 vs. TAIR 10
Match: AT4G03510.2 (RING membrane-anchor 1 )

HSP 1 Score: 142.1 bits (357), Expect = 5.4e-34
Identity = 84/216 (38.89%), Postives = 114/216 (52.78%), Query Frame = 0


Query: 18  FDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLA--IDEHPQCPVCKADISHTTM 77
           FDCNIC D   EPVVTLCGHL+CWPCI+KWL VQS S +     H QCPVCK+ +SH+T+
Sbjct: 46  FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCKSKVSHSTL 105

Query: 78  VPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLPYRNPYQRPNHD 137
           VPLYG GR   Q E +     R +    R     +   +T     Q++ + +P +     
Sbjct: 106 VPLYGRGRCTTQEEGKNSVPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQE----- 165

Query: 138 PVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFGN--SDNL---NSYLGT 197
               G Y     + +++    S+S     V  M+G  V  R+FG    D     ++Y   
Sbjct: 166 ----GYY---PVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLA 225

Query: 198 GSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 227
           G+    +RR  MQ  KSL RI  F  CCV+LC+L+F
Sbjct: 226 GTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of CmaCh03G012610 vs. TAIR 10
Match: AT4G28270.1 (RING membrane-anchor 2 )

HSP 1 Score: 116.7 bits (291), Expect = 2.4e-26
Identity = 73/219 (33.33%), Postives = 107/219 (48.86%), Query Frame = 0


Query: 16  GCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSAS-LAIDEH------PQCPVCKA 75
           G FDCNIC D   +PVVTLCGHL+CWPCI+KW +  + S   +D++      P+CPVCK+
Sbjct: 17  GDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKS 76

Query: 76  DISHTTMVPLYGCGRTAEQVEPEAKAMHRDIDIPPRPSACGNQMLATPSTHQQQLPYRNP 135
           D+S  T+VP+YG G+         KA     ++P RP+     +        +    R  
Sbjct: 77  DVSEATLVPIYGRGQ---------KAPQSGSNVPSRPTGPVYDLRGVGQRLGEGESQRYM 136

Query: 136 YQRPNHDPVLFGNYEEDSAASLLNLGRTSFSGFDHRVAGMIGNFVYARVFG-NSDNLNSY 195
           Y+ P  DPV+                            G++   VY R+FG +S N+  Y
Sbjct: 137 YRMP--DPVM----------------------------GVVCEMVYRRLFGESSSNMAPY 193

Query: 196 LGTGSRRDGLRRHEMQVAKSLNRISIFLFCCVILCVLVF 227
                R    RR  MQ  +SL+R+ +FL C + +C+ +F
Sbjct: 197 RDMNVRS---RRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of CmaCh03G012610 vs. TAIR 10
Match: AT1G19310.1 (RING/U-box superfamily protein )

HSP 1 Score: 103.6 bits (257), Expect = 2.1e-22
Identity = 45/89 (50.56%), Postives = 62/89 (69.66%), Query Frame = 0


Query: 18  FDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLAIDEHPQCPVCKADISHTTMVP 77
           F+CNIC D A +P+VTLCGHL+CWPC+YKWLH+ S S        CPVCKA I    +VP
Sbjct: 21  FECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQS------KDCPVCKAVIEEDRLVP 80

Query: 78  LYGCGRTAEQVEPEAKAMHRDIDIPPRPS 107
           LYG G+++   +P +K++   +++P RPS
Sbjct: 81  LYGRGKSS--ADPRSKSI-PGLEVPNRPS 100

The following BLAST results are available for this feature:

BLAST of CmaCh03G012610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6R567	2.9e-40	42.54	E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=...	[more]
Q8GUK7	4.9e-40	42.48	E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV...	[more]
O64425	7.6e-33	38.89	E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV...	[more]
P93030	3.4e-25	33.33	E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV...	[more]
Q99942	9.9e-17	47.73	E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens OX=9606 GN=RNF5 PE=1 SV=1	[more]

BLAST of CmaCh03G012610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IPM2	6.1e-134	100.00	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita maxima OX=3661 GN=LOC111478...	[more]
A0A6J1ED53	1.3e-131	99.12	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A0A0KK60	7.2e-111	82.77	Rnf5 OS=Cucumis sativus OX=3659 GN=Csa_6G517320 PE=4 SV=1	[more]
A0A5A7UGP7	3.9e-109	81.93	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo var. makuwa OX=1194695 G...	[more]
A0A1S3AZB8	3.9e-109	81.93	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucumis melo OX=3656 GN=LOC103484523 ...	[more]

BLAST of CmaCh03G012610 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022979030.1	1.2e-133	100.00	E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita maxima] >XP_022979031.1 E3 ub...	[more]
XP_022925786.1	2.6e-131	99.12	E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita moschata] >XP_022925787.1 E3 ...	[more]
XP_023543343.1	7.6e-131	98.67	E3 ubiquitin-protein ligase RMA3-like [Cucurbita pepo subsp. pepo] >XP_023543345...	[more]
KAG7034591.1	3.5e-128	98.65	E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. argyr...	[more]
XP_038881993.1	1.3e-111	82.57	E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida] >XP_038881994.1 E3 u...	[more]

BLAST of CmaCh03G012610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G27470.1	3.5e-41	42.48	RING membrane-anchor 3	[more]
AT4G03510.1	5.4e-34	38.89	RING membrane-anchor 1	[more]
AT4G03510.2	5.4e-34	38.89	RING membrane-anchor 1	[more]
AT4G28270.1	2.4e-26	33.33	RING membrane-anchor 2	[more]
AT1G19310.1	2.1e-22	50.56	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 20..66 e-value: 2.7E-8 score: 43.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 20..67 score: 12.415513
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 20..66 e-value: 3.1E-8 score: 33.3
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 2..80 e-value: 2.3E-16 score: 60.9
IPR045103	E3 ubiquitin-protein ligase RNF5/RNF185-like	PANTHER	PTHR12313	E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED	coord: 12..226
None	No IPR available	PANTHER	PTHR12313:SF6	E3 UBIQUITIN-PROTEIN LIGASE RMA3	coord: 12..226
None	No IPR available	CDD	cd16745	RING-HC_AtRMA_like	coord: 18..68 e-value: 4.77958E-25 score: 90.8263
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 14..80
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 35..44

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G012610.1	CmaCh03G012610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071712	ER-associated misfolded protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0044390	ubiquitin-like protein conjugating enzyme binding
molecular_function	GO:0061630	ubiquitin protein ligase activity