CmaCh03G011430 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh03G011430
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionVacuolar protein sorting-associated protein 55-like protein
LocationCma_Chr03: 7729631 .. 7732212 (+)
RNA-Seq ExpressionCmaCh03G011430
SyntenyCmaCh03G011430
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCCAATTTTTAGCTGAACCAGATTCTGTTAATGAGCCTACATATGCACCAAAGGTAGCCAAAAGAAAGAAGAAGAAGAAGAATCCTTCTTAGGTCGGACCTCAATTCTTGCCTTCTTCGTCGTGATTGAGGGCAAGAATCATCGCGCATCACTGCTGCCGGAACTTCTAGCTGATTGTAATGGCGATGACATTAGAAGGTACAGTTTGCAAATTTCCATATTAATTTGATTTCTTGCGATGATAAGCCAGTTACTGAACTGAATTTTTGCCGACTTAAGGATGAGCGCTTTAGAATTTATGCGTAAACTTAGTCTTATACCAGGTTTCCGAACGATGGATTTTCGTCGACTAAGAATTTATTTGTTCGCAGCTATTATGGAACGAGGGATTTAAGGGAGCAGTGTCGATTTAAATTTATTGGGAAATTTTTGGGGATTGTATCTTCTATCTCGTATTTGAATGAAGTTGTGGACATGGGGAAAATCATGCATGACACAGGAACGGCTAGTCTCAGGGGATTTTTCATTGTTCATAAACTGTTGTTGAATTTTCGTCGATGTTCTAAGTACTTTATTCTCTGTATAGATAGTTACAGAATGTGTGGAGCAAGAAAATGCAAAAACCCTTCCTGTATTAGGATTGAAAGTGATCCCATGATATGTGATCCCATATCGGTTGAAGAGTGGAACAAAACATTCTTCATAAGAGTGTAGAAATCTCTCTCTAATAGATGTGTTTTAAAGTCGTGAGGCTGACGGTGATACATAACGGGCTTAAAGCAACGAAGCATTCCTTATAAGGGTGTGGAAACCTCTTCCCAACAGACACGTTTTAAAATCGTGAGGTTGACGGAAATATGTAATGGGCTAAAACAGACAATATCTGGTAGTGGTGGGCTTGGGCCGTTACAAATGGTATTAGAGACAAATATCGGGCGGTGTGTCAGCAAGGATGCTAGGCCCCCAAGGAGGTGGATTGTGAGATCCCATATTGGTTGGAGAGGGGAACAAAACATTCCTTATATGTGTGTGGAAACCTCTCCCTAACAGACGCGTTATAAAATCGTGAGGATTATGGCGATACCTAATGGGCCAAAGCGGACAATATCCACTATCCATAAGGTTATCTCCCTGTCTATGAGAGCAAATATAATTATATCTAATAACCTGCAAAATCAGGTCAAAACCATTCTCAATGAAGCTGTACAAAGTGATTCCATTTTCTAGCTTTGAGATATCAGTATATTTGTTAACTGTTCTTAACATGGTTGTTGGCCAATACTATATACCACTGCCCTTGGAGTTTTATTTAAACCATTTGGTCCATTTGTTGCTCGTTTTCGCCTTTAGATATATCTGTCATTTAACGTTAACTAATGTTCTTGATCTTCATCGGGCGGTGGCTCGTGCTATTCGGGGAACATGGATGGACCTCATTTCTGCAGTGTGCGTCGAATTTGTCAATACTCTGTAACCATAGTTCTGTTTTCTGATGTCTAACTTTATGAAAAAAAAATCTAAGAAAACGTCCATCGGTCGCGCAGGTTAGCTGGGCTTGCGTTTATGTTTTCTTCTAGCATCTTGCTACAGATTTTGGTATGTTTTATAGTACACTTGTAATGGTTCTCTATCTGGAGGATTCCTTTTTTATCTCTCAGTATGATTGTTAGAATTTTGAACGACTATTTTTCACCTGATTTTGTTATCATCCTGGCAGGCTTGTGCACTATACAACAATTGGTGGCCTTTGCTCTCAGGTGAACATTAAATTTGTTAGTTTTCGATCGATAACTTCTAATGACTGCTAAGCATGTTTTCTCTGCAGCGTTGATGTACATGCTCATTCCGATGCCATGTTTATTTTCTGGAGGCGGGTCGACGCAGTTTCTGATTAGCCGAGACGGTGGAGGGTGAGTATCTCTTAAGCATTCATATTGAAAATAAGTTCTCTTCAATTAAATGAACTAACCTTATGGAGATATGCTTGTGTCATGGTTTTTGAGAAACACGATGTTCTTGTTAATGATGTCGTGATGCAAGTATATCGACAGTATTTGTTATATCTCGTGGTGTCACCCCTTGCATACATTCCCATCGATTAATTGTATCGGTTCATTTAGAAGTCCACATCATTGTGCTTACAAAGATTGAAAATGTAACAATACCAACACTTGAGTGCCTCTTCCTTCCCTTCGTGTTCTAACTTTTAGCCTTCTTTCTGGCTGGCGTTCGTGTTGTTGCGACTTTCTAGATGGATAGGTGCTGCCAAGTTCTTGACGGGAGCGTCAACCGTTGGGAATTTGGCAATTCCTATTATCCTGAGGCATGCTCAGATGATCGACACAGGAGCCATGTTCATAGAATTCGTTTCGTTCTTCATTTTTGTTTGCACTGTGTTGTGCTTTCACCGTGTTAGCATTGAAGATGATTGGTGATCCCATATTAATTCCAGAAGATTACAACAAGAAGAAACTATTGTATGATAGTAGTTCTCTTTTTTTCTTCTTTTCTTATTATGTTCTATTAATGCTTGTGAATGGAAATAAATCAGTATTTGGGAAATTTTAATTTAGTTCATCA

mRNA sequence

GTTCCAATTTTTAGCTGAACCAGATTCTGTTAATGAGCCTACATATGCACCAAAGGTAGCCAAAAGAAAGAAGAAGAAGAAGAATCCTTCTTAGGTCGGACCTCAATTCTTGCCTTCTTCGTCGTGATTGAGGGCAAGAATCATCGCGCATCACTGCTGCCGGAACTTCTAGCTGATTGTAATGGCGATGACATTAGAAGTGTGCGTCGAATTTGTCAATACTCTGTAACCATAGTTCTGTTTTCTGATGTCTAACTTTATGAAAAAAAAATCTAAGAAAACGTCCATCGGTCGCGCAGGTTAGCTGGGCTTGCGTTTATGTTTTCTTCTAGCATCTTGCTACAGATTTTGGCTTGTGCACTATACAACAATTGGTGGCCTTTGCTCTCAGCGTTGATGTACATGCTCATTCCGATGCCATGTTTATTTTCTGGAGGCGGGTCGACGCAGTTTCTGATTAGCCGAGACGGTGGAGGATGGATAGGTGCTGCCAAGTTCTTGACGGGAGCGTCAACCGTTGGGAATTTGGCAATTCCTATTATCCTGAGGCATGCTCAGATGATCGACACAGGAGCCATGTTCATAGAATTCGTTTCGTTCTTCATTTTTGTTTGCACTGTGTTGTGCTTTCACCGTGTTAGCATTGAAGATGATTGGTGATCCCATATTAATTCCAGAAGATTACAACAAGAAGAAACTATTGTATGATAGTAGTTCTCTTTTTTTCTTCTTTTCTTATTATGTTCTATTAATGCTTGTGAATGGAAATAAATCAGTATTTGGGAAATTTTAATTTAGTTCATCA

Coding sequence (CDS)

ATGTTTTCTTCTAGCATCTTGCTACAGATTTTGGCTTGTGCACTATACAACAATTGGTGGCCTTTGCTCTCAGCGTTGATGTACATGCTCATTCCGATGCCATGTTTATTTTCTGGAGGCGGGTCGACGCAGTTTCTGATTAGCCGAGACGGTGGAGGATGGATAGGTGCTGCCAAGTTCTTGACGGGAGCGTCAACCGTTGGGAATTTGGCAATTCCTATTATCCTGAGGCATGCTCAGATGATCGACACAGGAGCCATGTTCATAGAATTCGTTTCGTTCTTCATTTTTGTTTGCACTGTGTTGTGCTTTCACCGTGTTAGCATTGAAGATGATTGGTGA

Protein sequence

MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKFLTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW
Homology
[Close]
BLAST of CmaCh03G011430 vs. ExPASy Swiss-Prot
Match: Q9AST6 (Vacuolar protein sorting-associated protein 55 homolog OS=Arabidopsis thaliana OX=3702 GN=At1g32410 PE=2 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 6.5e-25
Identity = 54/102 (52.94%), Postives = 75/102 (73.53%), Query Frame = 0 

Query: 1   MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 60
           + S+ I+LQILACAL+NNWWP+LS +MY+L+PMP LF GG  +  L +     WI AAKF
Sbjct: 23  LVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSWINAAKF 82

Query: 61  LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVL 103
           LTGAS VG++AIP IL+HA +I  GA+ ++  S+ +F+  +L
Sbjct: 83  LTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFLVAIL 124

[Close]
BLAST of CmaCh03G011430 vs. ExPASy Swiss-Prot
Match: P47111 (Vacuolar protein sorting-associated protein 55 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=VPS55 PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 9.7e-05
Identity = 30/101 (29.70%), Postives = 53/101 (52.48%), Query Frame = 0 

Query: 7   LLQILACALYNNWWPLLSALMYMLIPMP-CLFSGGGS--TQFLISRDGGGWIGAAKFLTG 66
           LL IL+CAL++N++PL   L+++L P+P  +F+ G    T   +S         A FLTG
Sbjct: 24  LLVILSCALFHNYYPLFDILIFLLAPIPNTIFNAGNKYHTSDFMSDSSNTGQDLAHFLTG 83

Query: 67  ASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCF 105
                 +A+P++  H Q+I   +  +  +   I   +++ F
Sbjct: 84  MLVTSGIALPVVFYHCQLIGHLSCIMCMIGGLIIYSSIVIF 124

[Close]
BLAST of CmaCh03G011430 vs. ExPASy Swiss-Prot
Match: Q9UUH1 (Vacuolar protein sorting-associated protein 55 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=vps55 PE=3 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 2.2e-04
Identity = 28/107 (26.17%), Postives = 53/107 (49.53%), Query Frame = 0 

Query: 7   LLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQF-LISRDGGGWIGAAKFLTGAS 66
           +L IL+CAL+ NW+PLL  + ++L P+P L +   ST    +  +    +   +F  GA+
Sbjct: 19  MLVILSCALFKNWYPLLIVIPFILAPLPNLLTKKYSTSHDFLQEEDRNLLDFGRFTFGAT 78

Query: 67  TVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDD 113
                A+PI+  +  +I T A  +  V   I    +  + +  ++ +
Sbjct: 79  ICTGFALPIVFVNVGLIGTAAATMSCVGGSIIFLVITLYSQAFVQHE 125

[Close]
BLAST of CmaCh03G011430 vs. ExPASy TrEMBL
Match: A0A6J1IRY1 (vacuolar protein sorting-associated protein 55 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478782 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 6.7e-57
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 60
           MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF
Sbjct: 91  MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 150

Query: 61  LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW 114
           LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW
Sbjct: 151 LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW 203

[Close]
BLAST of CmaCh03G011430 vs. ExPASy TrEMBL
Match: A0A6J1IUW6 (vacuolar protein sorting-associated protein 55 homolog isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478782 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 6.7e-57
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 60
           MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF
Sbjct: 1   MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 60

Query: 61  LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW 114
           LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW
Sbjct: 61  LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW 113

[Close]
BLAST of CmaCh03G011430 vs. ExPASy TrEMBL
Match: A0A0A0KHI6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G453780 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.1e-54
Identity = 107/113 (94.69%), Postives = 111/113 (98.23%), Query Frame = 0 

Query: 1   MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 60
           MFSSSILLQILACALYNNWWPLLSALMY+L+PMPCLF GGGSTQFLISRDGGGWIGAAKF
Sbjct: 14  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKF 73

Query: 61  LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW 114
           LTGASTVG+LAIPIILRHA MIDTGAMFIEFVSFFIFVCTVLCFHRVS+EDDW
Sbjct: 74  LTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW 126

[Close]
BLAST of CmaCh03G011430 vs. ExPASy TrEMBL
Match: A0A1S3CHB4 (vacuolar protein sorting-associated protein 55 homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500914 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.1e-54
Identity = 107/113 (94.69%), Postives = 111/113 (98.23%), Query Frame = 0 

Query: 1   MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 60
           MFSSSILLQILACALYNNWWPLLSALMY+L+PMPCLF GGGSTQFLISRDGGGWIGAAKF
Sbjct: 1   MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKF 60

Query: 61  LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW 114
           LTGASTVG+LAIPIILRHA MIDTGAMFIEFVSFFIFVCTVLCFHRVS+EDDW
Sbjct: 61  LTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW 113

[Close]
BLAST of CmaCh03G011430 vs. ExPASy TrEMBL
Match: A0A1S3CIW0 (vacuolar protein sorting-associated protein 55 homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500914 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.1e-54
Identity = 107/113 (94.69%), Postives = 111/113 (98.23%), Query Frame = 0 

Query: 1   MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 60
           MFSSSILLQILACALYNNWWPLLSALMY+L+PMPCLF GGGSTQFLISRDGGGWIGAAKF
Sbjct: 14  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKF 73

Query: 61  LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW 114
           LTGASTVG+LAIPIILRHA MIDTGAMFIEFVSFFIFVCTVLCFHRVS+EDDW
Sbjct: 74  LTGASTVGSLAIPIILRHAHMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW 126

[Close]
BLAST of CmaCh03G011430 vs. NCBI nr
Match: XP_022979005.1 (vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita maxima] >XP_022979007.1 vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita maxima])

HSP 1 Score: 229.6 bits (584), Expect = 1.4e-56
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 60
           MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF
Sbjct: 91  MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 150

Query: 61  LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW 114
           LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW
Sbjct: 151 LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW 203

[Close]
BLAST of CmaCh03G011430 vs. NCBI nr
Match: XP_022979008.1 (vacuolar protein sorting-associated protein 55 homolog isoform X2 [Cucurbita maxima])

HSP 1 Score: 229.6 bits (584), Expect = 1.4e-56
Identity = 113/113 (100.00%), Postives = 113/113 (100.00%), Query Frame = 0 

Query: 1   MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 60
           MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF
Sbjct: 1   MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 60

Query: 61  LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW 114
           LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW
Sbjct: 61  LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW 113

[Close]
BLAST of CmaCh03G011430 vs. NCBI nr
Match: XP_023543155.1 (vacuolar protein sorting-associated protein 55 homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.6 bits (566), Expect = 1.7e-54
Identity = 108/113 (95.58%), Postives = 112/113 (99.12%), Query Frame = 0 

Query: 1   MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 60
           MFSSSILLQILACALYNNWWPLLSALMY+L+PMPCLF GGGSTQFLISRDGGGWIGAAKF
Sbjct: 1   MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKF 60

Query: 61  LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW 114
           LTGASTVG+LAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVS+EDDW
Sbjct: 61  LTGASTVGSLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW 113

[Close]
BLAST of CmaCh03G011430 vs. NCBI nr
Match: KAG6604338.1 (Vacuolar protein sorting-associated protein 55-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 222.6 bits (566), Expect = 1.7e-54
Identity = 108/113 (95.58%), Postives = 112/113 (99.12%), Query Frame = 0 

Query: 1   MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 60
           MFSSSILLQILACALYNNWWPLLSALMY+L+PMPCLF GGGSTQFLISRDGGGWIGAAKF
Sbjct: 91  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKF 150

Query: 61  LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW 114
           LTGASTVG+LAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVS+EDDW
Sbjct: 151 LTGASTVGSLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW 203

[Close]
BLAST of CmaCh03G011430 vs. NCBI nr
Match: XP_023543153.1 (vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 222.6 bits (566), Expect = 1.7e-54
Identity = 108/113 (95.58%), Postives = 112/113 (99.12%), Query Frame = 0 

Query: 1   MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 60
           MFSSSILLQILACALYNNWWPLLSALMY+L+PMPCLF GGGSTQFLISRDGGGWIGAAKF
Sbjct: 14  MFSSSILLQILACALYNNWWPLLSALMYVLVPMPCLFFGGGSTQFLISRDGGGWIGAAKF 73

Query: 61  LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW 114
           LTGASTVG+LAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVS+EDDW
Sbjct: 74  LTGASTVGSLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSLEDDW 126

[Close]
BLAST of CmaCh03G011430 vs. TAIR 10
Match: AT3G11530.1 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 204.9 bits (520), Expect = 3.4e-53
Identity = 95/113 (84.07%), Postives = 107/113 (94.69%), Query Frame = 0 

Query: 1   MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 60
           MFSSSILLQILACA+Y NWWP+LSALMY+++PMPC+F GGGSTQFLISRDGGGWI AAKF
Sbjct: 1   MFSSSILLQILACAIYGNWWPMLSALMYVVVPMPCMFFGGGSTQFLISRDGGGWIDAAKF 60

Query: 61  LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW 114
           LTGASTVG+LAIPIILRHAQMI+TGAM IEF SFFIF+CTV+CFHR S++DDW
Sbjct: 61  LTGASTVGSLAIPIILRHAQMIETGAMLIEFTSFFIFICTVMCFHRASLDDDW 113

[Close]
BLAST of CmaCh03G011430 vs. TAIR 10
Match: AT3G11530.2 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 204.9 bits (520), Expect = 3.4e-53
Identity = 95/113 (84.07%), Postives = 107/113 (94.69%), Query Frame = 0 

Query: 1   MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 60
           MFSSSILLQILACA+Y NWWP+LSALMY+++PMPC+F GGGSTQFLISRDGGGWI AAKF
Sbjct: 1   MFSSSILLQILACAIYGNWWPMLSALMYVVVPMPCMFFGGGSTQFLISRDGGGWIDAAKF 60

Query: 61  LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVLCFHRVSIEDDW 114
           LTGASTVG+LAIPIILRHAQMI+TGAM IEF SFFIF+CTV+CFHR S++DDW
Sbjct: 61  LTGASTVGSLAIPIILRHAQMIETGAMLIEFTSFFIFICTVMCFHRASLDDDW 113

[Close]
BLAST of CmaCh03G011430 vs. TAIR 10
Match: AT1G32410.1 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 114.8 bits (286), Expect = 4.6e-26
Identity = 54/102 (52.94%), Postives = 75/102 (73.53%), Query Frame = 0 

Query: 1   MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 60
           + S+ I+LQILACAL+NNWWP+LS +MY+L+PMP LF GG  +  L +     WI AAKF
Sbjct: 23  LVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSWINAAKF 82

Query: 61  LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVL 103
           LTGAS VG++AIP IL+HA +I  GA+ ++  S+ +F+  +L
Sbjct: 83  LTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFLVAIL 124

[Close]
BLAST of CmaCh03G011430 vs. TAIR 10
Match: AT1G32410.2 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 114.8 bits (286), Expect = 4.6e-26
Identity = 54/102 (52.94%), Postives = 75/102 (73.53%), Query Frame = 0 

Query: 1   MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 60
           + S+ I+LQILACAL+NNWWP+LS +MY+L+PMP LF GG  +  L +     WI AAKF
Sbjct: 23  LVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSWINAAKF 82

Query: 61  LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVL 103
           LTGAS VG++AIP IL+HA +I  GA+ ++  S+ +F+  +L
Sbjct: 83  LTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFLVAIL 124

[Close]
BLAST of CmaCh03G011430 vs. TAIR 10
Match: AT1G32410.3 (Vacuolar protein sorting 55 (VPS55) family protein )

HSP 1 Score: 114.8 bits (286), Expect = 4.6e-26
Identity = 54/102 (52.94%), Postives = 75/102 (73.53%), Query Frame = 0 

Query: 1   MFSSSILLQILACALYNNWWPLLSALMYMLIPMPCLFSGGGSTQFLISRDGGGWIGAAKF 60
           + S+ I+LQILACAL+NNWWP+LS +MY+L+PMP LF GG  +  L +     WI AAKF
Sbjct: 23  LVSTGIVLQILACALFNNWWPMLSVIMYVLLPMPLLFFGGSDSTSLFNESDNSWINAAKF 82

Query: 61  LTGASTVGNLAIPIILRHAQMIDTGAMFIEFVSFFIFVCTVL 103
           LTGAS VG++AIP IL+HA +I  GA+ ++  S+ +F+  +L
Sbjct: 83  LTGASAVGSVAIPSILKHAGLIGWGALALDLSSYVVFLVAIL 124

The following BLAST results are available for this feature:
BLAST of CmaCh03G011430 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9AST66.5e-2552.94Vacuolar protein sorting-associated protein 55 homolog OS=Arabidopsis thaliana O... [more]
P471119.7e-0529.70Vacuolar protein sorting-associated protein 55 OS=Saccharomyces cerevisiae (stra... [more]
Q9UUH12.2e-0426.17Vacuolar protein sorting-associated protein 55 OS=Schizosaccharomyces pombe (str... [more]
BLAST of CmaCh03G011430 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IRY16.7e-57100.00vacuolar protein sorting-associated protein 55 homolog isoform X1 OS=Cucurbita m... [more]
A0A6J1IUW66.7e-57100.00vacuolar protein sorting-associated protein 55 homolog isoform X2 OS=Cucurbita m... [more]
A0A0A0KHI63.1e-5494.69Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G453780 PE=3 SV=1[more]
A0A1S3CHB43.1e-5494.69vacuolar protein sorting-associated protein 55 homolog isoform X2 OS=Cucumis mel... [more]
A0A1S3CIW03.1e-5494.69vacuolar protein sorting-associated protein 55 homolog isoform X1 OS=Cucumis mel... [more]
BLAST of CmaCh03G011430 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022979005.11.4e-56100.00vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita max... [more]
XP_022979008.11.4e-56100.00vacuolar protein sorting-associated protein 55 homolog isoform X2 [Cucurbita max... [more]
XP_023543155.11.7e-5495.58vacuolar protein sorting-associated protein 55 homolog isoform X2 [Cucurbita pep... [more]
KAG6604338.11.7e-5495.58Vacuolar protein sorting-associated protein 55-like protein, partial [Cucurbita ... [more]
XP_023543153.11.7e-5495.58vacuolar protein sorting-associated protein 55 homolog isoform X1 [Cucurbita pep... [more]
BLAST of CmaCh03G011430 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G11530.13.4e-5384.07Vacuolar protein sorting 55 (VPS55) family protein [more]
AT3G11530.23.4e-5384.07Vacuolar protein sorting 55 (VPS55) family protein [more]
AT1G32410.14.6e-2652.94Vacuolar protein sorting 55 (VPS55) family protein [more]
AT1G32410.24.6e-2652.94Vacuolar protein sorting 55 (VPS55) family protein [more]
AT1G32410.34.6e-2652.94Vacuolar protein sorting 55 (VPS55) family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007262Vps55/LEPROTPFAMPF04133Vps55coord: 2..108
e-value: 6.7E-28
score: 97.0
IPR007262Vps55/LEPROTPANTHERPTHR12050LEPTIN RECEPTOR-RELATEDcoord: 1..112
NoneNo IPR availablePANTHERPTHR12050:SF0RH04491Pcoord: 1..112

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G011430.1CmaCh03G011430.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane