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CmaCh03G011150 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAGCAGTTCTTCTGTTCGGTCTAAACTCTGAACTGAAATTCTCATTCTCTTTCGTCAGTCAATCCATTTCTCCATATGCTTCTCTATTAGCATGTTTCTTTGAAATACAACTGCGGTTATCATTAGGGTTTTGATCTTCGATTCATCTTTCCAAGAGACGGACCGGAAGAGTTCGTCCACCTCCCATCGTTTCCCCCTGGCTTGCTGTTTGCGCAATAATCTCCATCTATCTGTTCTTCGGCTCCTAAATCCTTCTGGAAATCGAGATTTTAAACCAGAGATATGGAATCAGCGGAGGGGCTTAATCACTTCAAAGTTGGGCTTCTTCCAACAGTGTTCTATATTCCCGACTTCATAAGCGACGAAGATGAGACTATGATTCTGGATGATGTACCAAATTTTACTATTGCTTTTCGTTCTTTGCCCTTTTTTTTTGCCCTGTAATTGTTCGCTAAACTAGGTAATTTCATTTGTAGATTTATAAAGCGCCTGCGTCAAAATGGAAATCCTTGAAGAACAGGAGGCTGCAAAATTGGGGTTTGTTGAATAGCGATCTCATTTATTTTTGCTAATTGTTCGAAGTTCTGAAGTTTTGAAAGATTTGTAAGACTGCTTTCCTTATCCATTGATTTCTTGCAGGTGGCGTTGTACATGAAAAAGGTCTTCTTCCTCAAGAATGTAAGTAAAGAAAGAACTATATTTAAATGTTCTTAGTTAAGCTTAAACTTGATTGCCATATATCAGCTAATATTAATGCATGGAGATGGACTTCTTATTGACTTGATTACAGAATTCTAGCATGCTCTATTCATAATAAACTTTATATATTCAAGGTAATAGTACATTTTGTTCCCTGTTCTGTGCAATTTTTTCTTGAACGTTTAAAAATTGAAGACAACCAAAGGGAGAAATTTGGTGCATGAGAAATTAACTTCAAATTGGAAGTATAAGGCAACTTATAGGATAGGTGAACACACTGTGGAGGTTTGGAATGCAGCAAATTTCATTTTTGTCTTCCTGTTGGCTGTCCTACCAAATTTAACTTTTGCTTTCGATTACTCTGGGGGAATTAATACTTTTGGTTAGACTAGTTTAATCCAATCTCCTCATGGGAATGACTGAAAACCGTTGGAAAGACTTATACTGTGAGATCCCACATCGGTTGGAGACGGGATCGAACCATTCCTTATAAGGGCATGGAAACCTCTCCCTAGCATATGCATTTTAAAACCGCGAGGTTGACGGCGAAACGTAACAGACTAAAGCGGATAATATTTATTAGCAGTAGGTTTGAGTTTTTACAAATGGTATCGGAGCCAAACACTGGTCAGTGTGCTAGTGAGGACGTTAGGCCCCCAAGAGGGGTGGATTGTGAGATCCCACATTAGTTGGAGACCGGAACGAACCATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGCATTTTAAAATCGTGAAGCTGATGGCGATATGTAACGAGCGAAAGCAGACAATATCTAATAACGGTGGGTTTGGGCCATCAAGCTTGCAATTGGATATTTGTGTGGGTTTACGAACTTGAAGAGAATCTGTTCTATAGGTTTTATAACAGTGTCCTTTGAGCTCTAAAGTTTTGATCTTAGCACGGTTTTCTTACTCATCTACGTTGGGTAGTCCATATTTCCATGTCCCTTTTGCAAAAACTTGGATATTTCACATTCTTCTACGACGATTGCTTAAGTAGGACAAACAAGCATCCATATCATTTATCATAGTACACCACTTGAATCAGTTAAATTGACAAATCTCTGTCTTTTGATGTTCTGCAGTGCCTATATGGCTGACGAATATCACCAAGAAGATCTATCAAGAAACAAATCTATACCCTGCACCCATAAACCATGTTCTTATCAACGAATACCGTCCTAATCAAGGCATAATGGTACGAGCCTTCGTTTACCCGTTCTTAGTGCAGTTCTTGTTTGAATTATAATTATGTTCTTGCCATGATCCTCATCATAGAACTAATCTAGCGCTGTATTTTACCAATTAGCAACATCTTAGAAACAGTTTTTGGCTCTTGTGTAGCCACACCAAGATGGGCCTGCTTACTTTCCTGTAGTAACAATTCTGTCTCTCGGTTCTCCTGTCGTTATGGACTTCACTCCCCATTCGAGGTTGAAATCATGTCCAGACCAGTTGACAGAAAGCTTCGACGACAATGATTCTAATGGAGCTTCTGATGTCGAGACTCACTGCCCTTTCTCTATCCTTCTAATGCCTCGTAGTTTGCTCGTTTTTAAGGATGAAGCTTATTCAGGTAAATCTTGCCCTTGATTTTGTCTTTTAACCTTCCCAGTTTACTTGATTTTATCTTCTAATGCCTCGTAGGTTACTTGCATGGTATCAGTGACAATAGTCTTCAATGTTACGAACAGGTATGATAACAACTAAATGTAGCTATTGCAGGATCTAATTCATTCTTGATATTGATTTCATCATTGTAAGTTTGTTTTTCATTTCTTTGCTTTCTCAGGCAGTGAACAAAATTGAAGTTCGAAACTGTCTATTAGAAACTGAAAATCCAACCGTTGAAGTGAACTGCAATCATAGTTGTTTCGAGAGAACGAATAATCGGCTTTCGTTGACATGTCGACTCGTACCAAAGGTTCACAAGCATTTGTTCAGGCGTTGAACGGCTTGAAGGAACTTTTGGTTTGTACAATATCACAAGTTCTAAATAATTTATATGGCTATCCTAGGTTCGTTAACTATTGGTTTATGATTCTATATTTTAATAATATGAGGTAAAGGATTCAAATTTTTGATTTCGTAGTCGTTAGTATGTAATTTTTTTTACAACTGCTTAACAATATAATTTTATTTTTATTTGATAATATTTCTTTTTCTTTTATCATATACATAATATCATTTATTTATAATGAATAAAGGGAAGATTTTGAGTTTAAAATAACAACACGATCAATTTTATTTTTTATTTTATAATTTACAATTACATTTATATTTTTAATATATTTTCTTATCCACACATTACCATATATTTTAAACTAATAGAGAAGAGTTAAAAATAACAAGGTAAAAATATGTTTGAGATAATTTTTTTTCATAAAATATTTTGACGATATCAATTTTATTTTTATTTTCTCATCTACATAATACCATTTAGAGAGACTTTAAATACAATATTAGAAAGACATTTTTTCCACCTGATTTTATCATAAGATATTTATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTACAATTGTGTTATTCTAGAATATATATACACATAAAATGTTGTTCCATAAGGTCGGGCACGTGGATCGAGTACAGTAGATTTTCACTTTGTGTATTCAGAGGGGAAAAAATGTAATAAATGAGAGGAAGGGGAAAGAAAAATAGAAGAAGCAGTGCAGGAAAAGAAGTCAAGAAAGAAAAGAGAAGAGTGGAAGAAAAAGAAGAGAAGAGAAGAATAAATGGAAAAAAGATCAATAAAGCAAAAGAAAGAAGATGAGAAGAGGTAGAAAAGAGAGAGACAGAGAAGCCAGAAGAATATGTGAAAGAAAGAAAGAAAGAGAACATAAAAAGGAAAAGGAAAAGGAAAAACGAGTTCCAGCAGAAATGGCCTCTTCAATTTGAAAAAGAAATAGATGATTTAGACACAATTAACTTAAATATAAACGCCTTCAAATTCACTACGGTTAACCAATGAATTTCATAATACAAAATTAAATACTTAGACATAATCTAAGAGTGAAATCTAAATTTTAGAGAGCACAAAACTCAATTTTATTAACTAAACTTGTAATTAACAAAAAGAACAGAAACAAGAATCACTTCGTATGAAGTTACTAAATTCAAAATTGACTGATGAAATTCAGGAAACCAATCCACACCATAAAAAGAGAGACAGAGAGATAGAAACATTACATGGCGAGCACAAACATCCGGAAGAAAATAATCTTTCAATATTTTGAATCTACTTCATCTTTCGCAAACAAACATTAATATGTTCAAGGACCTGCAGCACTCATAAGATCAAAAGAAAAAAAGAAAAAGAGAAATGAAGAGAGAACATAACGATGCTCGAGTCACCAGATTTCTGCTTCTTCCTCGAATCGGAACTTCTATTACACACAGAATTCAACTTCCATTGAAATCGATCTACCTTCTGTAATCGAAACTTGAAATTTCTAGGTTTCAGGAAGTGAAATAGAAAACTGGATGGAGGAACAGGTGGAGTAG CAGCAGTTCTTCTGTTCGGTCTAAACTCTGAACTGAAATTCTCATTCTCTTTCGTCAGTCAATCCATTTCTCCATATGCTTCTCTATTAGCATGTTTCTTTGAAATACAACTGCGGTTATCATTAGGGTTTTGATCTTCGATTCATCTTTCCAAGAGACGGACCGGAAGAGTTCGTCCACCTCCCATCGTTTCCCCCTGGCTTGCTGTTTGCGCAATAATCTCCATCTATCTGTTCTTCGGCTCCTAAATCCTTCTGGAAATCGAGATTTTAAACCAGAGATATGGAATCAGCGGAGGGGCTTAATCACTTCAAAGTTGGGCTTCTTCCAACAGTGTTCTATATTCCCGACTTCATAAGCGACGAAGATGAGACTATGATTCTGGATGATATTTATAAAGCGCCTGCGTCAAAATGGAAATCCTTGAAGAACAGGAGGCTGCAAAATTGGGGTGGCGTTGTACATGAAAAAGGTCTTCTTCCTCAAGAATTGCCTATATGGCTGACGAATATCACCAAGAAGATCTATCAAGAAACAAATCTATACCCTGCACCCATAAACCATGTTCTTATCAACGAATACCGTCCTAATCAAGGCATAATGCCACACCAAGATGGGCCTGCTTACTTTCCTGTAGTAACAATTCTGTCTCTCGGTTCTCCTGTCGTTATGGACTTCACTCCCCATTCGAGGTTGAAATCATGTCCAGACCAGTTGACAGAAAGCTTCGACGACAATGATTCTAATGGAGCTTCTGATGTCGAGACTCACTGCCCTTTCTCTATCCTTCTAATGCCTCGTAGTTTGCTCGTTTTTAAGGATGAAGCTTATTCAGGTTACTTGCATGGTATCAGTGACAATAGTCTTCAATGTTACGAACAGGCAGTGAACAAAATTGAAGTTCGAAACTGTCTATTAGAAACTGAAAATCCAACCGTTGAAGTGAACTGCAATCATAGTTGTTTCGAGAGAACGAATAATCGGCTTTCGTTGACATGTCGACTCGTACCAAAGGTTTCAGGAAGTGAAATAGAAAACTGGATGGAGGAACAGGTGGAGTAG ATGGAATCAGCGGAGGGGCTTAATCACTTCAAAGTTGGGCTTCTTCCAACAGTGTTCTATATTCCCGACTTCATAAGCGACGAAGATGAGACTATGATTCTGGATGATATTTATAAAGCGCCTGCGTCAAAATGGAAATCCTTGAAGAACAGGAGGCTGCAAAATTGGGGTGGCGTTGTACATGAAAAAGGTCTTCTTCCTCAAGAATTGCCTATATGGCTGACGAATATCACCAAGAAGATCTATCAAGAAACAAATCTATACCCTGCACCCATAAACCATGTTCTTATCAACGAATACCGTCCTAATCAAGGCATAATGCCACACCAAGATGGGCCTGCTTACTTTCCTGTAGTAACAATTCTGTCTCTCGGTTCTCCTGTCGTTATGGACTTCACTCCCCATTCGAGGTTGAAATCATGTCCAGACCAGTTGACAGAAAGCTTCGACGACAATGATTCTAATGGAGCTTCTGATGTCGAGACTCACTGCCCTTTCTCTATCCTTCTAATGCCTCGTAGTTTGCTCGTTTTTAAGGATGAAGCTTATTCAGGTTACTTGCATGGTATCAGTGACAATAGTCTTCAATGTTACGAACAGGCAGTGAACAAAATTGAAGTTCGAAACTGTCTATTAGAAACTGAAAATCCAACCGTTGAAGTGAACTGCAATCATAGTTGTTTCGAGAGAACGAATAATCGGCTTTCGTTGACATGTCGACTCGTACCAAAGGTTTCAGGAAGTGAAATAGAAAACTGGATGGAGGAACAGGTGGAGTAG MESAEGLNHFKVGLLPTVFYIPDFISDEDETMILDDIYKAPASKWKSLKNRRLQNWGGVVHEKGLLPQELPIWLTNITKKIYQETNLYPAPINHVLINEYRPNQGIMPHQDGPAYFPVVTILSLGSPVVMDFTPHSRLKSCPDQLTESFDDNDSNGASDVETHCPFSILLMPRSLLVFKDEAYSGYLHGISDNSLQCYEQAVNKIEVRNCLLETENPTVEVNCNHSCFERTNNRLSLTCRLVPKVSGSEIENWMEEQVE Homology
BLAST of CmaCh03G011150 vs. ExPASy Swiss-Prot
Match: Q3KRA9 (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Homo sapiens OX=9606 GN=ALKBH6 PE=1 SV=2) HSP 1 Score: 163.3 bits (412), Expect = 3.6e-39 Identity = 87/230 (37.83%), Postives = 123/230 (53.48%), Query Frame = 0
BLAST of CmaCh03G011150 vs. ExPASy Swiss-Prot
Match: Q5PQ59 (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Xenopus laevis OX=8355 GN=alkbh6 PE=2 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 1.2e-37 Identity = 91/240 (37.92%), Postives = 124/240 (51.67%), Query Frame = 0
BLAST of CmaCh03G011150 vs. ExPASy Swiss-Prot
Match: Q6IQE9 (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Danio rerio OX=7955 GN=alkbh6 PE=2 SV=1) HSP 1 Score: 157.9 bits (398), Expect = 1.5e-37 Identity = 87/231 (37.66%), Postives = 121/231 (52.38%), Query Frame = 0
BLAST of CmaCh03G011150 vs. ExPASy Swiss-Prot
Match: Q8K2U2 (Alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Mus musculus OX=10090 GN=Alkbh6 PE=2 SV=3) HSP 1 Score: 154.1 bits (388), Expect = 2.2e-36 Identity = 86/231 (37.23%), Postives = 121/231 (52.38%), Query Frame = 0
BLAST of CmaCh03G011150 vs. ExPASy Swiss-Prot
Match: Q5UR03 (Uncharacterized protein L905 OS=Acanthamoeba polyphaga mimivirus OX=212035 GN=MIMI_L905 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.0e-09 Identity = 54/196 (27.55%), Postives = 91/196 (46.43%), Query Frame = 0
BLAST of CmaCh03G011150 vs. ExPASy TrEMBL
Match: A0A6J1IMJ8 (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Cucurbita maxima OX=3661 GN=LOC111478769 PE=4 SV=1) HSP 1 Score: 516.5 bits (1329), Expect = 6.3e-143 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
BLAST of CmaCh03G011150 vs. ExPASy TrEMBL
Match: A0A6J1ECI0 (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 OS=Cucurbita moschata OX=3662 GN=LOC111432961 PE=4 SV=1) HSP 1 Score: 501.5 bits (1290), Expect = 2.1e-138 Identity = 240/245 (97.96%), Postives = 241/245 (98.37%), Query Frame = 0
BLAST of CmaCh03G011150 vs. ExPASy TrEMBL
Match: A0A1S3CHF4 (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500943 PE=4 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 7.2e-115 Identity = 205/245 (83.67%), Postives = 221/245 (90.20%), Query Frame = 0
BLAST of CmaCh03G011150 vs. ExPASy TrEMBL
Match: A0A5A7SLT3 (Alpha-ketoglutarate-dependent dioxygenase alkB-like protein 6 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001850 PE=4 SV=1) HSP 1 Score: 423.3 bits (1087), Expect = 7.2e-115 Identity = 205/245 (83.67%), Postives = 221/245 (90.20%), Query Frame = 0
BLAST of CmaCh03G011150 vs. ExPASy TrEMBL
Match: A0A0A0KKP8 (Fe2OG dioxygenase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G476660 PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 7.5e-112 Identity = 202/245 (82.45%), Postives = 219/245 (89.39%), Query Frame = 0
BLAST of CmaCh03G011150 vs. NCBI nr
Match: XP_022978982.1 (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Cucurbita maxima]) HSP 1 Score: 516.5 bits (1329), Expect = 1.3e-142 Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0
BLAST of CmaCh03G011150 vs. NCBI nr
Match: XP_022925559.1 (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Cucurbita moschata]) HSP 1 Score: 501.5 bits (1290), Expect = 4.3e-138 Identity = 240/245 (97.96%), Postives = 241/245 (98.37%), Query Frame = 0
BLAST of CmaCh03G011150 vs. NCBI nr
Match: XP_023543264.1 (alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 496.5 bits (1277), Expect = 1.4e-136 Identity = 238/245 (97.14%), Postives = 240/245 (97.96%), Query Frame = 0
BLAST of CmaCh03G011150 vs. NCBI nr
Match: KAG6604313.1 (Alpha-ketoglutarate-dependent dioxygenase alkB-like 6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 493.0 bits (1268), Expect = 1.5e-135 Identity = 236/245 (96.33%), Postives = 239/245 (97.55%), Query Frame = 0
BLAST of CmaCh03G011150 vs. NCBI nr
Match: KAG7034466.1 (Alpha-ketoglutarate-dependent dioxygenase alkB-like 6 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 488.0 bits (1255), Expect = 4.9e-134 Identity = 237/249 (95.18%), Postives = 239/249 (95.98%), Query Frame = 0
BLAST of CmaCh03G011150 vs. TAIR 10
Match: AT4G20350.2 (oxidoreductases ) HSP 1 Score: 291.2 bits (744), Expect = 8.2e-79 Identity = 144/239 (60.25%), Postives = 172/239 (71.97%), Query Frame = 0
BLAST of CmaCh03G011150 vs. TAIR 10
Match: AT4G20350.1 (oxidoreductases ) HSP 1 Score: 191.0 bits (484), Expect = 1.2e-48 Identity = 98/176 (55.68%), Postives = 118/176 (67.05%), Query Frame = 0
BLAST of CmaCh03G011150 vs. TAIR 10
Match: AT4G02485.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 43.1 bits (100), Expect = 3.9e-04 Identity = 34/145 (23.45%), Postives = 58/145 (40.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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