CmaCh03G010080 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G010080
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	B3 domain-containing transcription factor VRN1-like isoform X2
Location	Cma_Chr03: 7059359 .. 7060956 (+)
RNA-Seq Expression	CmaCh03G010080
Synteny	CmaCh03G010080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCAAATAAAACTAAATCGAAAAAACCTTATTGGCTATACCATAATAATGAAGAAAAAAAAAAACGGCATCCATCCTGCAGCTAGCAGAGCAGAACAGTCCTTGAAAACCGTATGTACGATCCGATGCACAATATCTGAACAGACGCCGACATTTTTCACCAACTTCATCTTCCCCGCTTCAGCCTTCTTTCATTCACTATCTGCAGCTTGACCACAAACAATGGCTTCTTCTCCTCAGTTTTTCAAAATCCTTCTGCACAGAAACCTCGAAGATCAAAAACTGGTGAAAACAGAGTCTCCTTCACTTTCTTTTCTTATCTCTATGTCTTAAACGGTTTGCTTCCTTTCCAGATGATTCCGAAGAAGTTCGTGAAGAAATACGGTAAGCTCTTGTCAAGTGCCGTAATTCTAAAGCTTCCCGATGGAATGAAATGGAAAGTGGGTCTGGCAATGGCTGCTAATGGCTCCGTTTGGCTGCAAAAGGGGTGGCATAAATTTGCCAACCACTACTGTTTGGAGTTTGGGTCTCTGCTGGTTTTTAGATTGGAGGGCAGAAGTTCGAGCTTTGAAGTAACCATATTCGACCCATCTGGATTGGAATCCGAATATTCTTCTTTCCATGTTTGTGATTCTACAACAGAATCTGAAGAGGACGATGACTCTGTTTCTGATTCAGATGATGAAGGTATGAACTTTTGGAGGTTATTTTGAAGTGTTCTTTTAGAATTTGATAGTTTATCTTTTTTTAATCATCTCTTCAAAAGACTATGAAATAATTGGGGTTGCAAGGAGAAGACGAAAATCAGCAACAGAGAAACCTGGCTTCCAAGTTGTGTTGAACCAATCAAACGTATGCGGTAGATACAACATGGTAAGCTCTTGTTTGATTATTCTGAACCCTTTCTCGTTTGATCTTGTTTGATGATTTGTTCTTCGTTCTTGGAGGTTTTTCCTGCGAGATTTGCAAGGAGTTATTTATGTGAGAAATCTGGAAATTTTAACGTTCAAACTGCAAATGGTAGAAAATGGCCACTTTTGTATAAATGGAGTGGAAATGGAGATAAATTTGCGTACGTTTCCAGTGGGTGGAAGCGTTTTGTACAGGAAAATCTGTTGAAAGAAGGCGATGTTGTGTTCTTCGAAATGATTAAGAAAGGAAGATTCTTGTTCACCAAATTACAAGATAAGAGCACTGCATCAAACCCCTTCTTCAAAGTGGATATTCATTACAAAAGCTACAAGAACAGAATCTTGGTAACAAAAACAGAAGAAAACAATCAAAACCCATTTCTTTAGTTCATAAAATGTATACATTTTCATGGGAATTGAGGCATTTTATGTTGTTGTTCATTGGCAGAACATTCCCATGGCGTTTGGTAAGGAGCATTTTTCACCAGAAATGAAATATGTAAAGCTTCAAACTGGGAATAAGGAATGGATGGTAACATTAAAGCAATATGAAGGATGTATGAGATTCTCAGGTGGTTGGAGGAAATTTTACGGTGAAAATGGGTTGAAAGATGGAGACACCTGCTTGTTTGAAATGGTGAGCAAACAAAACTGCGTTTTTAAAGTGACCATTTTCAAGCAACCTTAA

mRNA sequence

TTCAAATAAAACTAAATCGAAAAAACCTTATTGGCTATACCATAATAATGAAGAAAAAAAAAAACGGCATCCATCCTGCAGCTAGCAGAGCAGAACAGTCCTTGAAAACCGTATGTACGATCCGATGCACAATATCTGAACAGACGCCGACATTTTTCACCAACTTCATCTTCCCCGCTTCAGCCTTCTTTCATTCACTATCTGCAGCTTGACCACAAACAATGGCTTCTTCTCCTCAGTTTTTCAAAATCCTTCTGCACAGAAACCTCGAAGATCAAAAACTGATGATTCCGAAGAAGTTCGTGAAGAAATACGGTAAGCTCTTGTCAAGTGCCGTAATTCTAAAGCTTCCCGATGGAATGAAATGGAAAGTGGGTCTGGCAATGGCTGCTAATGGCTCCGTTTGGCTGCAAAAGGGGTGGCATAAATTTGCCAACCACTACTGTTTGGAGTTTGGGTCTCTGCTGGTTTTTAGATTGGAGGGCAGAAGTTCGAGCTTTGAAGTAACCATATTCGACCCATCTGGATTGGAATCCGAATATTCTTCTTTCCATGTTTGTGATTCTACAACAGAATCTGAAGAGGACGATGACTCTGTTTCTGATTCAGATGATGAAGACTATGAAATAATTGGGGTTGCAAGGAGAAGACGAAAATCAGCAACAGAGAAACCTGGCTTCCAAGTTGTGTTGAACCAATCAAACGTATGCGGTAGATACAACATGGTTTTTCCTGCGAGATTTGCAAGGAGTTATTTATGTGAGAAATCTGGAAATTTTAACGTTCAAACTGCAAATGGTAGAAAATGGCCACTTTTGTATAAATGGAGTGGAAATGGAGATAAATTTGCGTACGTTTCCAGTGGGTGGAAGCGTTTTGTACAGGAAAATCTGTTGAAAGAAGGCGATGTTGTGTTCTTCGAAATGATTAAGAAAGGAAGATTCTTGTTCACCAAATTACAAGATAAGAGCACTGCATCAAACCCCTTCTTCAAAGTGGATATTCATTACAAAAGCTACAAGAACAGAATCTTGAACATTCCCATGGCGTTTGGTAAGGAGCATTTTTCACCAGAAATGAAATATGTAAAGCTTCAAACTGGGAATAAGGAATGGATGGTAACATTAAAGCAATATGAAGGATGTATGAGATTCTCAGGTGGTTGGAGGAAATTTTACGGTGAAAATGGGTTGAAAGATGGAGACACCTGCTTGTTTGAAATGGTGAGCAAACAAAACTGCGTTTTTAAAGTGACCATTTTCAAGCAACCTTAA

Coding sequence (CDS)

ATGGCTTCTTCTCCTCAGTTTTTCAAAATCCTTCTGCACAGAAACCTCGAAGATCAAAAACTGATGATTCCGAAGAAGTTCGTGAAGAAATACGGTAAGCTCTTGTCAAGTGCCGTAATTCTAAAGCTTCCCGATGGAATGAAATGGAAAGTGGGTCTGGCAATGGCTGCTAATGGCTCCGTTTGGCTGCAAAAGGGGTGGCATAAATTTGCCAACCACTACTGTTTGGAGTTTGGGTCTCTGCTGGTTTTTAGATTGGAGGGCAGAAGTTCGAGCTTTGAAGTAACCATATTCGACCCATCTGGATTGGAATCCGAATATTCTTCTTTCCATGTTTGTGATTCTACAACAGAATCTGAAGAGGACGATGACTCTGTTTCTGATTCAGATGATGAAGACTATGAAATAATTGGGGTTGCAAGGAGAAGACGAAAATCAGCAACAGAGAAACCTGGCTTCCAAGTTGTGTTGAACCAATCAAACGTATGCGGTAGATACAACATGGTTTTTCCTGCGAGATTTGCAAGGAGTTATTTATGTGAGAAATCTGGAAATTTTAACGTTCAAACTGCAAATGGTAGAAAATGGCCACTTTTGTATAAATGGAGTGGAAATGGAGATAAATTTGCGTACGTTTCCAGTGGGTGGAAGCGTTTTGTACAGGAAAATCTGTTGAAAGAAGGCGATGTTGTGTTCTTCGAAATGATTAAGAAAGGAAGATTCTTGTTCACCAAATTACAAGATAAGAGCACTGCATCAAACCCCTTCTTCAAAGTGGATATTCATTACAAAAGCTACAAGAACAGAATCTTGAACATTCCCATGGCGTTTGGTAAGGAGCATTTTTCACCAGAAATGAAATATGTAAAGCTTCAAACTGGGAATAAGGAATGGATGGTAACATTAAAGCAATATGAAGGATGTATGAGATTCTCAGGTGGTTGGAGGAAATTTTACGGTGAAAATGGGTTGAAAGATGGAGACACCTGCTTGTTTGAAATGGTGAGCAAACAAAACTGCGTTTTTAAAGTGACCATTTTCAAGCAACCTTAA

Protein sequence

MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGSVWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESEEDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLCEKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRFLFTKLQDKSTASNPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEWMVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMVSKQNCVFKVTIFKQP

Homology

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BLAST of CmaCh03G010080 vs. ExPASy Swiss-Prot
Match: Q8L3W1 (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.4e-30
Identity = 105/353 (29.75%), Postives = 161/353 (45.61%), Query Frame = 0


Query: 5   PQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGSVWLQ 64
           P F K++    +++++L +P KFV K+   LS AV L +PDG  W+VGL  A N  +W Q
Sbjct: 4   PFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADN-KIWFQ 63

Query: 65  KGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESEEDDD 124
            GW +F + Y +  G LL+FR EG +S+F V IF+ S  E  Y S  + DS     +   
Sbjct: 64  DGWQEFVDRYSIRIGYLLIFRYEG-NSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRAR 123

Query: 125 SVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLCEKSG 184
              D +DED E+I  +       +  P   V  N+         +F          E + 
Sbjct: 124 LFEDLEDEDAEVIFPS---SVYPSPLPESTVPANKGYASSAIQTLFTGPVKAE---EPTP 183

Query: 185 NFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRFLFT 244
              +    GRK         N D     SS  +    EN  K     F+E     +   T
Sbjct: 184 TPKIPKKRGRK-------KKNADPEEINSSAPRDDDPENRSK-----FYESASARKRTVT 243

Query: 245 KLQDKST--------ASNPFFKVDIHYK-SYKNRILNIPMAFGKEHFSPEMKYVKLQTGN 304
             + +           +NPFF+V +     Y+  I+ +P  F +++ S    ++K+Q   
Sbjct: 244 AEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAE 303

Query: 305 KEWMVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMVSKQNCVFKVTIFK 349
           K+W V      G  +FS GW +F  EN L +GD C+FE++  ++ V KVT F+
Sbjct: 304 KQWPVRCLYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFR 336

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BLAST of CmaCh03G010080 vs. ExPASy Swiss-Prot
Match: Q8GYM4 (B3 domain-containing protein REM14 OS=Arabidopsis thaliana OX=3702 GN=REM14 PE=2 SV=2)

HSP 1 Score: 88.2 bits (217), Expect = 2.0e-16
Identity = 76/297 (25.59%), Postives = 124/297 (41.75%), Query Frame = 0


Query: 63  LQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESEED 122
           L  GW +FA  + L  G ++VFR E R  SF VT+  PS  E +Y S    +   E +++
Sbjct: 58  LTDGWKEFALSHDLRIGDIVVFRQE-RDMSFHVTMLGPSCCEIQYGSCSDEERNLEKKKN 117

Query: 123 DDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYN-MVFPARFARSYLCE 182
            +  + S                S+ +   F   +  S++  RY+ M+FP  F R     
Sbjct: 118 PNGEAKS----------------SSLDPSCFSANVAPSSL--RYDLMLFPMGFVRENGVV 177

Query: 183 KSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRF 242
            SG   +    GR W    +   +     YV  GW  F   N L+ GD+  F++IK+G  
Sbjct: 178 GSGKIVLMNEKGRSWNFNLRQKPSCGT-VYVRGGWVSFCDANGLQAGDIYTFKLIKRGGT 237

Query: 243 LFTKLQDKSTASNPF----FKVDIHYKSYKNRILNIPMAFGKEHFSPEMK--YVKLQTGN 302
           L  +L  K   S       F  ++   + +   L +P  F +E+   + +   + +    
Sbjct: 238 LVLRLLPKGAESCSLDPSCFVANVAPSTLRYDTLYLPKRFMRENGVDKRRGEMILMNEKG 297

Query: 303 KEWMVTLKQYEGC--MRFSGGWRKFYGENGLKDGDTCLFEMVSKQNCVFKVTIFKQP 351
           K W + LK  + C       GWR F   NGL+ G    F+++ K   +    +  +P
Sbjct: 298 KSWTLDLKLKKSCGTSLIRRGWRSFCSANGLRAGSIITFKLIKKSGTLVLCLLSNEP 334

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BLAST of CmaCh03G010080 vs. ExPASy Swiss-Prot
Match: Q10GM3 (B3 domain-containing protein Os03g0622200 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0622200 PE=2 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 1.7e-15
Identity = 82/324 (25.31%), Postives = 136/324 (41.98%), Query Frame = 0


Query: 19  QKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGSVWLQKGWHKFANHYCLEF 78
           + + +P +F   +   +S  V L+ P G  W +G+A +  G + LQ GW +F +   +E 
Sbjct: 42  ESMTVPARFANNFNGHISEEVNLRSPSGETWSIGVANSDAGELVLQPGWKEFVDGNGIEE 101

Query: 79  GSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESEEDDDSVSDSDDEDYEIIG 138
           G  L+FR  G SSSF+V IFDPSG E   +S H   S      ++ +            G
Sbjct: 102 GDCLLFRYSGVSSSFDVLIFDPSGCEK--ASPHFVGSHGFGRAENSA------------G 161

Query: 139 VARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSY--LCEKSGNFNVQTANGRKW 198
             +  R      P   +V   +       M       RS    C++S  F+ +T      
Sbjct: 162 AEQGGRNGRRTPP---IVDGDNGHRHHLEMTLHRNSCRSIPRACKRS-LFSDETE----- 221

Query: 199 PLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRFLFTKLQDKSTASNPF 258
               K +   D+    ++   R+ +    + G V  + + ++ R   +++       NP 
Sbjct: 222 ---AKENDGEDEDVVAAAEGGRYGEYYFSRHGRVAEYNLREEDREEISRVPVPVQPGNPV 281

Query: 259 FKVDI---HYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNK--EWMVTLKQYEGCMRF 318
           F   I   H +S K  I+ +   F  ++     + V L+  ++  EW V     +    F
Sbjct: 282 FVQVIHSSHVRSSKYCIVGVSPEFAGKYLGAVEREVVLERASRGGEWHVPFVHRQNTRGF 339

Query: 319 SG-GWRKFYGENGLKDGDTCLFEM 335
            G GWR+F G+N L   D CLFE+
Sbjct: 342 YGAGWRQFAGDNRLVAHDVCLFEL 339

[Close]

BLAST of CmaCh03G010080 vs. ExPASy Swiss-Prot
Match: Q84WP3 (B3 domain-containing protein REM17 OS=Arabidopsis thaliana OX=3702 GN=REM17 PE=2 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 4.2e-14
Identity = 87/356 (24.44%), Postives = 149/356 (41.85%), Query Frame = 0


Query: 4   SPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGSVWL 63
           +P FF+ +L  +     L IP  F  K+         ++  +     V L   A+   WL
Sbjct: 12  NPHFFQPILTES--RTHLNIPVAFFSKH---------VEGRNNQNKTVTLRSDASDKTWL 71

Query: 64  QK--------GWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDS 123
            K        GW  FA  + L  G ++VFRLEG    F VT   PS  E +Y   H    
Sbjct: 72  VKMDGLKLTDGWEDFAFAHDLRTGDIVVFRLEG-EMVFHVTALGPSCCEIQY---HTSSH 131

Query: 124 TTESEEDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVC-GRYNMVFPARF 183
               ++ +D ++ +      +    R++ +S+ +   F  V   S  C     +  P  F
Sbjct: 132 NINDDDRNDQINIASRNSSRVKKNPRKKVESSLDHSRF--VAKVSAWCLSNDRLYIPLSF 191

Query: 184 ARSYLCEK--SGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVF 243
           AR     K  S    +Q   GR W L+ +   +G +  +V SGW+RF  EN +++G    
Sbjct: 192 ARLNGLNKINSKKIYLQNEEGRSWKLVLRHDKSGMQ-TFVQSGWRRFCSENGIRQGQYT- 251

Query: 244 FEMIKKG-----RFLFTKLQDKS------TASNPFFKVDIHYKSYKNRILNIPMAFGKEH 303
           F++++K      R    K + K       ++ +  F+  +   S +N +L +P +F   +
Sbjct: 252 FKLVRKSAPPVIRLCRAKAKPKQRSVAEYSSDHSCFEGSVTPSSLRNDLLYLPRSFVNSN 311

Query: 304 FSPE--MKYVKLQTGNKEWMVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMV 336
              +   + V       +W + LK+++       GW  F   N +K GD+  F++V
Sbjct: 312 RLDKRCSEIVLKNEQGVKWPLVLKRFKSVTYLPKGWTSFCQVNRIKAGDSFKFKLV 348

[Close]

BLAST of CmaCh03G010080 vs. ExPASy Swiss-Prot
Match: Q851V5 (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0621600 PE=3 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 4.3e-11
Identity = 94/392 (23.98%), Postives = 155/392 (39.54%), Query Frame = 0


Query: 7   FFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGSVWLQKG 66
           FFK+++      +++ IP KF + +   +   + LK  +G    V +   +N  V L KG
Sbjct: 150 FFKVMI--GGFRRQMTIPYKFAENFRDQIQGTIKLKARNGNTCSVLVDKCSNKLV-LTKG 209

Query: 67  WHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYS------------------ 126
           W +FAN + ++ G  LVFR  G +S FEV IFDPSG     S                  
Sbjct: 210 WAEFANSHDIKMGDFLVFRYTG-NSQFEVKIFDPSGCVKAASHNAVNIGQHAQNMQGDPI 269

Query: 127 -----------------------SFHVCDSTTESEEDDDSVSDSDDEDYEIIGVARRR-- 186
                                     V D+  +  + + + S  DD++     V R +  
Sbjct: 270 EILSCSDEHLRAQSLTTERQNQPEKDVIDNCNKKMKTEHASSSEDDQETPTAEVHRMKVE 329

Query: 187 ---RKSATEKPGFQVVLNQSNVCGRYNMVFPAR-FARSYLCEKSGNFNVQTANGRKWPLL 246
              R   +  P F  V+ +SNV  +   V  +R +A  Y         +Q  +G++W + 
Sbjct: 330 EMVRAIHSNHPVFVAVMKKSNVTRQPCYVAISRKYANEYFPGGDQMLTLQ-RHGKRWQV- 389

Query: 247 YKWSGNGDKFAYVSSGWKRFVQENLLKEGDVV----------FFEMIKKGRFLFTKLQDK 306
            K+  +  K   +S GW++F ++N L+    +           F  +KK      KL  +
Sbjct: 390 -KFCISKRKLRMLSKGWRKFTRDNELQHWAPLALFITLFFSPHFRKMKKCGQKMRKLNTR 449

Query: 307 STASNP----FFKV---DIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQ-TGNKEWMVT 334
           STA +     FFKV   D H +      + IP  F +       K +KL+      + V 
Sbjct: 450 STARDDQEKYFFKVMIGDFHKR------MTIPDKFARHFKGVISKTIKLEPRSGYTFDVQ 509

[Close]

BLAST of CmaCh03G010080 vs. ExPASy TrEMBL
Match: A0A6J1IRS6 (B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477865 PE=4 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 1.9e-195
Identity = 336/348 (96.55%), Postives = 338/348 (97.13%), Query Frame = 0


Query: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60
           MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS
Sbjct: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60

Query: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120
           VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE
Sbjct: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120

Query: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC 180
           EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC
Sbjct: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC 180

Query: 181 EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240
           EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR
Sbjct: 181 EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240

Query: 241 FLFTKLQDKSTASNPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEWMV 300
           FLFTKLQDKSTASNPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEWMV
Sbjct: 241 FLFTKLQDKSTASNPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEWMV 300

Query: 301 TLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMVSKQNCVFKVTIFK 349
           TLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEM    +    +  FK
Sbjct: 301 TLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFK 348

[Close]

BLAST of CmaCh03G010080 vs. ExPASy TrEMBL
Match: A0A6J1IQE2 (B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477865 PE=4 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 1.9e-195
Identity = 336/348 (96.55%), Postives = 338/348 (97.13%), Query Frame = 0


Query: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60
           MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS
Sbjct: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60

Query: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120
           VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE
Sbjct: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120

Query: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC 180
           EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC
Sbjct: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC 180

Query: 181 EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240
           EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR
Sbjct: 181 EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240

Query: 241 FLFTKLQDKSTASNPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEWMV 300
           FLFTKLQDKSTASNPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEWMV
Sbjct: 241 FLFTKLQDKSTASNPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEWMV 300

Query: 301 TLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMVSKQNCVFKVTIFK 349
           TLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEM    +    +  FK
Sbjct: 301 TLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFK 348

[Close]

BLAST of CmaCh03G010080 vs. ExPASy TrEMBL
Match: A0A6J1GFY4 (B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453814 PE=4 SV=1)

HSP 1 Score: 654.4 bits (1687), Expect = 2.6e-184
Identity = 322/350 (92.00%), Postives = 331/350 (94.57%), Query Frame = 0


Query: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60
           MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGL MAANG+
Sbjct: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA 60

Query: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120
           VWLQKGWHKFANHY LEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFH CDS TESE
Sbjct: 61  VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESE 120

Query: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC 180
           EDDDSVSDSD+EDYE IGV+RRRRKSATEKPGFQVVLNQSNVCGRYNMVFPA+FARSYLC
Sbjct: 121 EDDDSVSDSDEEDYE-IGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLC 180

Query: 181 EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240
           EKSGNFNVQTANGRKWPLLYKWSG+ DKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR
Sbjct: 181 EKSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240

Query: 241 FLFTKLQDKSTAS--NPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEW 300
           FLFTKLQDK+TAS  NPFFKVDIHYKSYKNRILNIP+AFGKEHFSPEMK VKLQTGNKEW
Sbjct: 241 FLFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIPLAFGKEHFSPEMKSVKLQTGNKEW 300

Query: 301 MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMVSKQNCVFKVTIFK 349
           MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEM    +    +  FK
Sbjct: 301 MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFK 349

[Close]

BLAST of CmaCh03G010080 vs. ExPASy TrEMBL
Match: A0A6J1IMQ4 (B3 domain-containing transcription factor VRN1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111477865 PE=4 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 2.1e-117
Identity = 233/348 (66.95%), Postives = 235/348 (67.53%), Query Frame = 0


Query: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60
           MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS
Sbjct: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60

Query: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120
           VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE
Sbjct: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120

Query: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC 180
           EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNM            
Sbjct: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNM------------ 180

Query: 181 EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 FLFTKLQDKSTASNPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEWMV 300
                                          NIPMAFGKEHFSPEMKYVKLQTGNKEWMV
Sbjct: 241 -------------------------------NIPMAFGKEHFSPEMKYVKLQTGNKEWMV 245

Query: 301 TLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMVSKQNCVFKVTIFK 349
           TLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEM    +    +  FK
Sbjct: 301 TLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFK 245

[Close]

BLAST of CmaCh03G010080 vs. ExPASy TrEMBL
Match: A0A6J1GFZ2 (B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453814 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 3.2e-110
Identity = 223/348 (64.08%), Postives = 229/348 (65.80%), Query Frame = 0


Query: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60
           MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGL MAANG+
Sbjct: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA 60

Query: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120
           VWLQKGWHKFANHY LEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFH CDS TESE
Sbjct: 61  VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESE 120

Query: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC 180
           EDDDSVSDSD+EDYE IGV+RRRRKSATEKPGFQVVLNQSNVCGRYNM            
Sbjct: 121 EDDDSVSDSDEEDYE-IGVSRRRRKSATEKPGFQVVLNQSNVCGRYNM------------ 180

Query: 181 EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240
                                                                       
Sbjct: 181 ------------------------------------------------------------ 240

Query: 241 FLFTKLQDKSTASNPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEWMV 300
                                          NIP+AFGKEHFSPEMK VKLQTGNKEWMV
Sbjct: 241 -------------------------------NIPLAFGKEHFSPEMKSVKLQTGNKEWMV 244

Query: 301 TLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMVSKQNCVFKVTIFK 349
           TLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEM    +    +  FK
Sbjct: 301 TLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFK 244

[Close]

BLAST of CmaCh03G010080 vs. NCBI nr
Match: XP_022977573.1 (B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 691.4 bits (1783), Expect = 4.0e-195
Identity = 336/348 (96.55%), Postives = 338/348 (97.13%), Query Frame = 0


Query: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60
           MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS
Sbjct: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60

Query: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120
           VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE
Sbjct: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120

Query: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC 180
           EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC
Sbjct: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC 180

Query: 181 EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240
           EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR
Sbjct: 181 EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240

Query: 241 FLFTKLQDKSTASNPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEWMV 300
           FLFTKLQDKSTASNPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEWMV
Sbjct: 241 FLFTKLQDKSTASNPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEWMV 300

Query: 301 TLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMVSKQNCVFKVTIFK 349
           TLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEM    +    +  FK
Sbjct: 301 TLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFK 348

[Close]

BLAST of CmaCh03G010080 vs. NCBI nr
Match: XP_022977574.1 (B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 691.4 bits (1783), Expect = 4.0e-195
Identity = 336/348 (96.55%), Postives = 338/348 (97.13%), Query Frame = 0


Query: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60
           MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS
Sbjct: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60

Query: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120
           VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE
Sbjct: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120

Query: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC 180
           EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC
Sbjct: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC 180

Query: 181 EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240
           EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR
Sbjct: 181 EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240

Query: 241 FLFTKLQDKSTASNPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEWMV 300
           FLFTKLQDKSTASNPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEWMV
Sbjct: 241 FLFTKLQDKSTASNPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEWMV 300

Query: 301 TLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMVSKQNCVFKVTIFK 349
           TLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEM    +    +  FK
Sbjct: 301 TLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFK 348

[Close]

BLAST of CmaCh03G010080 vs. NCBI nr
Match: XP_023544920.1 (B3 domain-containing transcription factor VRN1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 679.9 bits (1753), Expect = 1.2e-191
Identity = 334/352 (94.89%), Postives = 342/352 (97.16%), Query Frame = 0


Query: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60
           MASSPQFFKILLHRNLED+KLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGL MAANG+
Sbjct: 1   MASSPQFFKILLHRNLEDKKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA 60

Query: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120
           VWLQKGWHKFANHY LEFGSLLVFRLEGRSSSFEVTIFDP+GLESEYSS HVCDS TESE
Sbjct: 61  VWLQKGWHKFANHYRLEFGSLLVFRLEGRSSSFEVTIFDPTGLESEYSSLHVCDSITESE 120

Query: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC 180
           EDDDSVSDSD+EDYE IGV+RRRRKSATEKPGFQVVLNQSNVCGRYNMVFPA+FARSYLC
Sbjct: 121 EDDDSVSDSDEEDYE-IGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLC 180

Query: 181 EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240
           EKSGNFNVQTANGRKWPLLYKWSG+ DKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR
Sbjct: 181 EKSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240

Query: 241 FLFTKLQDKSTAS--NPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEW 300
           FLFTKLQDK+TAS  NPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMK VKLQTGNKEW
Sbjct: 241 FLFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKSVKLQTGNKEW 300

Query: 301 MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMVSKQNCVFKVTIFKQP 351
           MVTLKQYEGCMRFSGGWRKFYGENGL DGDTCLFEMVSKQNCVFKVTIFKQP
Sbjct: 301 MVTLKQYEGCMRFSGGWRKFYGENGLNDGDTCLFEMVSKQNCVFKVTIFKQP 351

[Close]

BLAST of CmaCh03G010080 vs. NCBI nr
Match: XP_022950827.1 (B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 654.4 bits (1687), Expect = 5.4e-184
Identity = 322/350 (92.00%), Postives = 331/350 (94.57%), Query Frame = 0


Query: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60
           MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGL MAANG+
Sbjct: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA 60

Query: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120
           VWLQKGWHKFANHY LEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFH CDS TESE
Sbjct: 61  VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHACDSITESE 120

Query: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC 180
           EDDDSVSDSD+EDYE IGV+RRRRKSATEKPGFQVVLNQSNVCGRYNMVFPA+FARSYLC
Sbjct: 121 EDDDSVSDSDEEDYE-IGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLC 180

Query: 181 EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240
           EKSGNFNVQTANGRKWPLLYKWSG+ DKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR
Sbjct: 181 EKSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240

Query: 241 FLFTKLQDKSTAS--NPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEW 300
           FLFTKLQDK+TAS  NPFFKVDIHYKSYKNRILNIP+AFGKEHFSPEMK VKLQTGNKEW
Sbjct: 241 FLFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIPLAFGKEHFSPEMKSVKLQTGNKEW 300

Query: 301 MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMVSKQNCVFKVTIFK 349
           MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEM    +    +  FK
Sbjct: 301 MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFK 349

[Close]

BLAST of CmaCh03G010080 vs. NCBI nr
Match: KAG7034367.1 (B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 651.0 bits (1678), Expect = 5.9e-183
Identity = 321/350 (91.71%), Postives = 329/350 (94.00%), Query Frame = 0


Query: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGS 60
           MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGL MAANG+
Sbjct: 1   MASSPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLTMAANGA 60

Query: 61  VWLQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESE 120
           VWLQKGWHKFANHY LEFGSLLVFRLEGRSSSFEVTI DPSGLESEYSSFH CDS TESE
Sbjct: 61  VWLQKGWHKFANHYSLEFGSLLVFRLEGRSSSFEVTIIDPSGLESEYSSFHACDSITESE 120

Query: 121 EDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLC 180
           EDDDSVSDSD+EDYE IGV+RRRRKSATEKPGFQVVLNQSNVCGRYNMVFPA+FARSYLC
Sbjct: 121 EDDDSVSDSDEEDYE-IGVSRRRRKSATEKPGFQVVLNQSNVCGRYNMVFPAKFARSYLC 180

Query: 181 EKSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240
           EKSGNFNVQTANGRKWPLLYKWSG+ DKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR
Sbjct: 181 EKSGNFNVQTANGRKWPLLYKWSGSVDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGR 240

Query: 241 FLFTKLQDKSTAS--NPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEW 300
           FLFTKLQDK+TAS  NPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMK VKLQTGNKEW
Sbjct: 241 FLFTKLQDKNTASTRNPFFKVDIHYKSYKNRILNIPMAFGKEHFSPEMKSVKLQTGNKEW 300

Query: 301 MVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMVSKQNCVFKVTIFK 349
            VTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEM    +    +  FK
Sbjct: 301 TVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMHGSTSAASSLEFFK 349

[Close]

BLAST of CmaCh03G010080 vs. TAIR 10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 135.2 bits (339), Expect = 1.0e-31
Identity = 105/353 (29.75%), Postives = 161/353 (45.61%), Query Frame = 0


Query: 5   PQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGSVWLQ 64
           P F K++    +++++L +P KFV K+   LS AV L +PDG  W+VGL  A N  +W Q
Sbjct: 4   PFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADN-KIWFQ 63

Query: 65  KGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESEEDDD 124
            GW +F + Y +  G LL+FR EG +S+F V IF+ S  E  Y S  + DS     +   
Sbjct: 64  DGWQEFVDRYSIRIGYLLIFRYEG-NSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKRAR 123

Query: 125 SVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYNMVFPARFARSYLCEKSG 184
              D +DED E+I  +       +  P   V  N+         +F          E + 
Sbjct: 124 LFEDLEDEDAEVIFPS---SVYPSPLPESTVPANKGYASSAIQTLFTGPVKAE---EPTP 183

Query: 185 NFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRFLFT 244
              +    GRK         N D     SS  +    EN  K     F+E     +   T
Sbjct: 184 TPKIPKKRGRK-------KKNADPEEINSSAPRDDDPENRSK-----FYESASARKRTVT 243

Query: 245 KLQDKST--------ASNPFFKVDIHYK-SYKNRILNIPMAFGKEHFSPEMKYVKLQTGN 304
             + +           +NPFF+V +     Y+  I+ +P  F +++ S    ++K+Q   
Sbjct: 244 AEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAE 303

Query: 305 KEWMVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMVSKQNCVFKVTIFK 349
           K+W V      G  +FS GW +F  EN L +GD C+FE++  ++ V KVT F+
Sbjct: 304 KQWPVRCLYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFR 336

[Close]

BLAST of CmaCh03G010080 vs. TAIR 10
Match: AT2G24645.1 (Transcriptional factor B3 family protein )

HSP 1 Score: 88.2 bits (217), Expect = 1.4e-17
Identity = 76/297 (25.59%), Postives = 124/297 (41.75%), Query Frame = 0


Query: 63  LQKGWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDSTTESEED 122
           L  GW +FA  + L  G ++VFR E R  SF VT+  PS  E +Y S    +   E +++
Sbjct: 58  LTDGWKEFALSHDLRIGDIVVFRQE-RDMSFHVTMLGPSCCEIQYGSCSDEERNLEKKKN 117

Query: 123 DDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVCGRYN-MVFPARFARSYLCE 182
            +  + S                S+ +   F   +  S++  RY+ M+FP  F R     
Sbjct: 118 PNGEAKS----------------SSLDPSCFSANVAPSSL--RYDLMLFPMGFVRENGVV 177

Query: 183 KSGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVFFEMIKKGRF 242
            SG   +    GR W    +   +     YV  GW  F   N L+ GD+  F++IK+G  
Sbjct: 178 GSGKIVLMNEKGRSWNFNLRQKPSCGT-VYVRGGWVSFCDANGLQAGDIYTFKLIKRGGT 237

Query: 243 LFTKLQDKSTASNPF----FKVDIHYKSYKNRILNIPMAFGKEHFSPEMK--YVKLQTGN 302
           L  +L  K   S       F  ++   + +   L +P  F +E+   + +   + +    
Sbjct: 238 LVLRLLPKGAESCSLDPSCFVANVAPSTLRYDTLYLPKRFMRENGVDKRRGEMILMNEKG 297

Query: 303 KEWMVTLKQYEGC--MRFSGGWRKFYGENGLKDGDTCLFEMVSKQNCVFKVTIFKQP 351
           K W + LK  + C       GWR F   NGL+ G    F+++ K   +    +  +P
Sbjct: 298 KSWTLDLKLKKSCGTSLIRRGWRSFCSANGLRAGSIITFKLIKKSGTLVLCLLSNEP 334

[Close]

BLAST of CmaCh03G010080 vs. TAIR 10
Match: AT1G26680.1 (transcriptional factor B3 family protein )

HSP 1 Score: 80.5 bits (197), Expect = 3.0e-15
Identity = 87/356 (24.44%), Postives = 149/356 (41.85%), Query Frame = 0


Query: 4   SPQFFKILLHRNLEDQKLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGSVWL 63
           +P FF+ +L  +     L IP  F  K+         ++  +     V L   A+   WL
Sbjct: 12  NPHFFQPILTES--RTHLNIPVAFFSKH---------VEGRNNQNKTVTLRSDASDKTWL 71

Query: 64  QK--------GWHKFANHYCLEFGSLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHVCDS 123
            K        GW  FA  + L  G ++VFRLEG    F VT   PS  E +Y   H    
Sbjct: 72  VKMDGLKLTDGWEDFAFAHDLRTGDIVVFRLEG-EMVFHVTALGPSCCEIQY---HTSSH 131

Query: 124 TTESEEDDDSVSDSDDEDYEIIGVARRRRKSATEKPGFQVVLNQSNVC-GRYNMVFPARF 183
               ++ +D ++ +      +    R++ +S+ +   F  V   S  C     +  P  F
Sbjct: 132 NINDDDRNDQINIASRNSSRVKKNPRKKVESSLDHSRF--VAKVSAWCLSNDRLYIPLSF 191

Query: 184 ARSYLCEK--SGNFNVQTANGRKWPLLYKWSGNGDKFAYVSSGWKRFVQENLLKEGDVVF 243
           AR     K  S    +Q   GR W L+ +   +G +  +V SGW+RF  EN +++G    
Sbjct: 192 ARLNGLNKINSKKIYLQNEEGRSWKLVLRHDKSGMQ-TFVQSGWRRFCSENGIRQGQYT- 251

Query: 244 FEMIKKG-----RFLFTKLQDKS------TASNPFFKVDIHYKSYKNRILNIPMAFGKEH 303
           F++++K      R    K + K       ++ +  F+  +   S +N +L +P +F   +
Sbjct: 252 FKLVRKSAPPVIRLCRAKAKPKQRSVAEYSSDHSCFEGSVTPSSLRNDLLYLPRSFVNSN 311

Query: 304 FSPE--MKYVKLQTGNKEWMVTLKQYEGCMRFSGGWRKFYGENGLKDGDTCLFEMV 336
              +   + V       +W + LK+++       GW  F   N +K GD+  F++V
Sbjct: 312 RLDKRCSEIVLKNEQGVKWPLVLKRFKSVTYLPKGWTSFCQVNRIKAGDSFKFKLV 348

[Close]

BLAST of CmaCh03G010080 vs. TAIR 10
Match: AT1G49480.1 (related to vernalization1 1 )

HSP 1 Score: 70.5 bits (171), Expect = 3.1e-12
Identity = 33/97 (34.02%), Postives = 57/97 (58.76%), Query Frame = 0


Query: 253 SNPFFKVDIHYK-SYKNRILNIPMAFGKEHFSPEMKYVKLQTGNKEWMVTLKQYEGCMRF 312
           +NP+F+V +     Y+  I+ +P  F +++ S    ++KLQ G K+W V      G  +F
Sbjct: 125 TNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQWPVRCLYKAGRAKF 184

Query: 313 SGGWRKFYGENGLKDGDTCLFEMVSKQNCVFKVTIFK 349
           S GW +F  EN + +GD C+FE++  ++ V +VT F+
Sbjct: 185 SQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFR 221

[Close]

BLAST of CmaCh03G010080 vs. TAIR 10
Match: AT4G33280.1 (AP2/B3-like transcriptional factor family protein )

HSP 1 Score: 68.9 bits (167), Expect = 9.0e-12
Identity = 72/271 (26.57%), Postives = 112/271 (41.33%), Query Frame = 0


Query: 20  KLMIPKKFVKKYGKLLSSAVILKLPDGMKWKVGLAMAANGSVWLQKGWHKFANHYCLEFG 79
           +L+IP+KF     + L   V LK P G+ + VG+      ++  + GW KF   + LE  
Sbjct: 36  RLVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEEN 95

Query: 80  SLLVFRLEGRSSSFEVTIFDPSGLESEYSSFHV--CD-------STTESEEDDDSVSDSD 139
            LLVF+  G  S FEV +FD   L  + +S+ V  C        S T  E+++   SD D
Sbjct: 96  DLLVFKFHG-VSEFEVLVFDGQTLCEKPTSYFVRKCGHAEKTKASHTGYEQEEHINSDID 155

Query: 140 ------------------DEDYEIIGVARRRR---------------------------- 199
                             +  Y + G  + RR                            
Sbjct: 156 TASAQLPVISPTSTVRVSEGKYPLSGFKKMRRELSNDNLDQKADVEMISAGSNKKALSLA 215

Query: 200 KSATEKPGFQVVLNQSNVCGRYNMVFPARF-ARSYLCEKSGNFNVQTANGRKWPLLYKWS 235
           K A    GF V + +S+V  +  +  P ++  ++ L  +     V   +  KW + +   
Sbjct: 216 KRAISPDGFLVFMKRSHVVSKCFLTIPYKWCVKNMLITRQE--VVMQVDQTKWEMKFNIF 275

The following BLAST results are available for this feature:

BLAST of CmaCh03G010080 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L3W1	1.4e-30	29.75	B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q8GYM4	2.0e-16	25.59	B3 domain-containing protein REM14 OS=Arabidopsis thaliana OX=3702 GN=REM14 PE=2...	[more]
Q10GM3	1.7e-15	25.31	B3 domain-containing protein Os03g0622200 OS=Oryza sativa subsp. japonica OX=399...	[more]
Q84WP3	4.2e-14	24.44	B3 domain-containing protein REM17 OS=Arabidopsis thaliana OX=3702 GN=REM17 PE=2...	[more]
Q851V5	4.3e-11	23.98	Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japoni...	[more]

BLAST of CmaCh03G010080 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IRS6	1.9e-195	96.55	B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita maxi...	[more]
A0A6J1IQE2	1.9e-195	96.55	B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita maxi...	[more]
A0A6J1GFY4	2.6e-184	92.00	B3 domain-containing transcription factor VRN1-like isoform X1 OS=Cucurbita mosc...	[more]
A0A6J1IMQ4	2.1e-117	66.95	B3 domain-containing transcription factor VRN1-like isoform X3 OS=Cucurbita maxi...	[more]
A0A6J1GFZ2	3.2e-110	64.08	B3 domain-containing transcription factor VRN1-like isoform X2 OS=Cucurbita mosc...	[more]

BLAST of CmaCh03G010080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022977573.1	4.0e-195	96.55	B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita maxima...	[more]
XP_022977574.1	4.0e-195	96.55	B3 domain-containing transcription factor VRN1-like isoform X2 [Cucurbita maxima...	[more]
XP_023544920.1	1.2e-191	94.89	B3 domain-containing transcription factor VRN1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022950827.1	5.4e-184	92.00	B3 domain-containing transcription factor VRN1-like isoform X1 [Cucurbita moscha...	[more]
KAG7034367.1	5.9e-183	91.71	B3 domain-containing transcription factor VRN1, partial [Cucurbita argyrosperma ...	[more]

BLAST of CmaCh03G010080 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18990.1	1.0e-31	29.75	AP2/B3-like transcriptional factor family protein	[more]
AT2G24645.1	1.4e-17	25.59	Transcriptional factor B3 family protein	[more]
AT1G26680.1	3.0e-15	24.44	transcriptional factor B3 family protein	[more]
AT1G49480.1	3.1e-12	34.02	related to vernalization1 1	[more]
AT4G33280.1	9.0e-12	26.57	AP2/B3-like transcriptional factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003340	B3 DNA binding domain	SMART	SM01019	B3_2	coord: 153..250 e-value: 1.2E-11 score: 54.7 coord: 7..101 e-value: 7.6E-18 score: 75.3 coord: 256..350 e-value: 8.1E-12 score: 55.3
IPR003340	B3 DNA binding domain	PFAM	PF02362	B3	coord: 256..348 e-value: 3.3E-13 score: 49.4 coord: 7..99 e-value: 1.2E-14 score: 53.9 coord: 153..247 e-value: 7.6E-17 score: 61.0
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 6..101 score: 13.718589
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 153..249 score: 14.494171
IPR003340	B3 DNA binding domain	PROSITE	PS50863	B3	coord: 256..350 score: 13.619878
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 5..99 e-value: 8.01521E-20 score: 81.22
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 256..348 e-value: 4.58207E-15 score: 68.1233
IPR003340	B3 DNA binding domain	CDD	cd10017	B3_DNA	coord: 151..244 e-value: 5.03727E-19 score: 78.9089
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 1..102 e-value: 2.9E-25 score: 90.1
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	2.40.330.10		coord: 138..245 e-value: 1.4E-23 score: 84.9 coord: 246..349 e-value: 3.6E-27 score: 96.5
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 252..348
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 148..245
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	101936	DNA-binding pseudobarrel domain	coord: 4..102
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 251..348 coord: 143..242
None	No IPR available	PANTHER	PTHR31920:SF26	TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED	coord: 251..348 coord: 143..242
None	No IPR available	PANTHER	PTHR31920	B3 DOMAIN-CONTAINING	coord: 3..144
None	No IPR available	PANTHER	PTHR31920:SF26	TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED	coord: 3..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G010080.1	CmaCh03G010080.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding