CmaCh03G009730 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh03G009730
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr03: 6885003 .. 6886723 (-)
RNA-Seq ExpressionCmaCh03G009730
SyntenyCmaCh03G009730
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCACACCCATTGGGGTGGTTGGGACGGGAAGGAACGTGAATGTGGACCGTCGGCTCTCGAGTCGGATAGGTTAGTAAAGAAATTGACCGGTGCCGCCTGTGCAGTAACGAACCGGCGGGTCAGTAAAGAGGTTCTTTGGTTCTGAGCTGGACGACACCAAGTGGATCTCGGGGACCCGACAAATCTGTCCACGGCGGAACAAAATTTGAGTTTCAATTTTCTTGAACAATAATGGATGCTGTAACATTTACCTATTTTTACCTTATAAACAGCCCCAACTGTCATTTTGGTGGCTAGACGATGATGCAAGTATTGATTGTTGGAAGCTCACAAAAAGTAACCTTATAAGCTCAATCCTTTCATTCCTGGGACGCTAAACTCCACCCATATTTCTTCTCTTTGTTTGACAACCTTTGAATGTATGATTTTGAGCTTAGTTTTTGCTAATAATGACATGACACATCACTTTACTTTATGGTGCGAAACCTACTGGGAAAGCATTGCCATTAAAATTACAAGCAAAGAAGGATGCTTCACCCATTTATTTCCACTTGATGTTGTAAATTAATACACCATTTATTGGCGGGCTTGACGAAGGCGGAAAATCGGGTGGAGGAGGAGTCATGTGCGAGGGGGCCCAACGAAGAGTTCGAGTGGGATCCCATTGGGCTCACTACTGGGCTCGAGTGAAACGAGTTCGTAGTGTTTTCCCGTGATGGGCTCTGCATATACTACTCTGGCTGGCGAGAGGTGGGCGACGCTGCCGTCAGACTGCTCACCCCCGAGTCGGTCTATAAACTAAAATTAGCTGCAGCAAGTGGCTCCGCTCAATATTGGTTGAGTGATTTAATTTTGAATGATTTGAATTTCTGTAAATTACGGAGCATCCTCCCTCATTAATGGGGTTTACTTTTATCTAGAAAAATCATTCGGTAAATAAAGTATTTTTATCTTAAAAACCACGGCGGTAAACACAACATACTGTCCCTCAGTTTTTTTTTTCCTTTTTTCTTTTTTCTTTTCCTTCAAAATTGGAGCCCTAATGTTTTCAGTTTCAGTTTAGCGTTCCCTCTCTCTCGATTCCCAGTCTCCCTCCATCCAGAGTGAGCGTCAGCCCTCTTAAGTCCTCGACCTGGCGCCGGCGACCAATCGACCAATTGCCCGCTCATTCTCCCTTTCGATCGATCGATTTTGCGGTTCGCGGAGACAAGGCTCTCGCCTCCCATCCCTTATATCCTTTCTCTTCCTTGGTAAGATTGAGTTTCTATCACGTTCTCTTCCTTTTCGGTTTATTTTATTTGTGCCCTCCCAATGCTCGCCTCCCCGCCACCCCCCCTTCTGGGCTTCCTGTCTCTGCCGCTCCCATCCTTTTGATTTCTTGTAAGATTGAAGTTTGTTTTTTGATCCTTTTAACAACTTTTGGTGTTTCAAACGAAGTACTGCTAGCTTAGCGTTGGTCATCTTCTAGTTTTTGCTTCTTCGAATTTACAGATTGTATATAGTTGGCAGTTAGGCAACCAGACAGATAGTCCTCTTCTTGTAACCAATTTCTTTCACCGTCTGCGCGTGGTTCCCTGAGCCAGAAGAGATTTGATTTTATAGGACTGGATTACAAGTCAAGAACCATTGCCTTAGAGTGATGATTTTGTGTTATTTTTCCTCAATAATTCATTAATTTGGAAAGTGTAGTTTGCTGGAATATACAGCGTTCCTTAA

mRNA sequence

ATGGAGCACACCCATTGGGGTGGTTGGGACGGGAAGGAACGTGAATGTGGACCGTCGGCTCTCGAGTCGGATAGGTTAGTAAAGAAATTGACCGGTGCCGCCTGTGCAGTAACGAACCGGCGGTTTAGCGTTCCCTCTCTCTCGATTCCCAGTCTCCCTCCATCCAGAGTGAGCGTCAGCCCTCTTAAGTCCTCGACCTGGCGCCGGCGACCAATCGACCAATTGCCCGCTCATTCTCCCTTTCGATCGATCGATTTTGCGGTTCGCGGAGACAAGGCTCTCGCCTCCCATCCCTTATATCCTTTCTCTTCCTTGTTTGCTGGAATATACAGCGTTCCTTAA

Coding sequence (CDS)

ATGGAGCACACCCATTGGGGTGGTTGGGACGGGAAGGAACGTGAATGTGGACCGTCGGCTCTCGAGTCGGATAGGTTAGTAAAGAAATTGACCGGTGCCGCCTGTGCAGTAACGAACCGGCGGTTTAGCGTTCCCTCTCTCTCGATTCCCAGTCTCCCTCCATCCAGAGTGAGCGTCAGCCCTCTTAAGTCCTCGACCTGGCGCCGGCGACCAATCGACCAATTGCCCGCTCATTCTCCCTTTCGATCGATCGATTTTGCGGTTCGCGGAGACAAGGCTCTCGCCTCCCATCCCTTATATCCTTTCTCTTCCTTGTTTGCTGGAATATACAGCGTTCCTTAA

Protein sequence

MEHTHWGGWDGKERECGPSALESDRLVKKLTGAACAVTNRRFSVPSLSIPSLPPSRVSVSPLKSSTWRRRPIDQLPAHSPFRSIDFAVRGDKALASHPLYPFSSLFAGIYSVP
Homology
[Close]
BLAST of CmaCh03G009730 vs. NCBI nr
Match: KAG7034338.1 (PI-PLC X domain-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 105.1 bits (261), Expect = 3.9e-19
Identity = 54/68 (79.41%), Postives = 55/68 (80.88%), Query Frame = 0 

Query: 45  PSLSIPSLPPSRVSVSPLKSSTWRRRPIDQ-------LPAHSPFRSIDFAVRGDKALASH 104
           P    P LPPSRVSVSPLKSSTWRRRPIDQ       LPAHSPFRSIDFA RGDKAL+SH
Sbjct: 6   PLSRFPLLPPSRVSVSPLKSSTWRRRPIDQLPPVRGHLPAHSPFRSIDFAARGDKALSSH 65

Query: 105 PLYPFSSL 106
           PLYPFSSL
Sbjct: 66  PLYPFSSL 73

The following BLAST results are available for this feature:
BLAST of CmaCh03G009730 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh03G009730 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh03G009730 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7034338.13.9e-1979.41PI-PLC X domain-containing protein, partial [Cucurbita argyrosperma subsp. argyr... [more]
BLAST of CmaCh03G009730 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G009730.1CmaCh03G009730.1mRNA