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CmaCh03G009320 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGAGAGCATATTAATTACACATATTTTAAATATATAAGAAAATTAATAAAATAAATAAATAAAAGATATTTTATTGTTTGTCCACGCAAGCATGAGAGAGGAGCAGAGGCATGGACAAAGGAAGCAAGGCAAATTATCCACAAAAAGACAAAAGGGGGAAATCCAACGGTGGAGGAGCGGCCATCCGCGGAGACACGGAGCCGCTAGCACCCAAGTCTTTGGAATCTCATCCCAAAAGAATGAAAAGTGTTTTAGTATGACCACGCGCTCTCCCGTTGCGTGCATCTTCACCTCACCCTCAAACTAACCCAACCTTAACCACAGTTAGTTATCCTCCCCACGCCCCCCTTTCCCTCTTATATATACCCCCTCTTTCCGATTTCCCCCGATTGCTCGCACCCACCTTTCTCATCCCTGATTTCCATGCCACTCACCATTTCCTCCATTTTACCGTCGTCGTACCAAGCATGAGTTGCAACGGTTGCCGCGTTCTTCGAAAGGGCTGCAGCGAGTCCTGTATTCTTCGCCCTTGCTTGCAGTGGATTGAGACCTCCGAGGCCCAAGGCCACGCCACTGTCTTCGTCGCCAAGTTCTTCGGCCGCGCCGGCCTTATGTCCTTCATCTCCGCTGTCCCCGAATCTCAGCGACCTTGTATGTTCCCTTTTCTTCCCTCTTTTTCCTTCTCATTTTCTATCTTTTCTATTTTCATTTTTCTGATGTTTTCTATTCCCTTTCTTTTTCAGCTTTGTTTCAGTCTTTGTTGTTCGAAGCCTGTGGACGCACTGTTAATCCCGTCAACGGCGCCGTTGGCCTTCTATGGACTGGCAACTGGCATGTTTGTCAAGCCGCCGTTGACACCGTCTTACGAGGCGGCACGTTGCGGCCGATCAACGATTTCCTCGCCGCTGGTTCTCCCAATCTTTCCTCCGACGACACTTCCGAGGCTGAAGTCGCCTGTACCGACATGTGGAAGCTACGAGATTCTTATCCCAATTCACGATTCTCCAACTCCCGATCCAGGCTCTCTCCGAAACGCAAGCGATCCGAGGAATCATCCACCAAGAACCAACTGAACGACCTAAATCTCCGGTTGACTCCTACTTTTGTATCCAAATCAACCCCGCGCGCCGCTACACCGTCAATGAATTCTGAGGAATCCGAGACCACTACGTGCTTCGAGAGTGGCCTGGGGGATCACCATCACTACTATCCAGAAGAAGGAACCGCCCAACGGAAGCTTCTTAATTTGTTCGTCTAAGGACCAAATTTTTGTTACACACGTTTGGCTTCATGTGGTGCTGTGAATCAGAGGTTCACAGCCGCAAAGACAGGCCATATTAGGCGAAAATTTTTGTGGGTTTTACTTAAGAAAGATAACCGGAAGGGAAGTAAGGGAGGTTCAGCCGTGAAAGTGAAGATTCCGGCGAGTTTTGTTGATCGTAATTGTAACATCCATCCCACCGGTACAGGATTTCACTCCTCTGTCGAGGCAGAGAAGTGAGAAATGAGCGTCTGTCGGTGGTTGTCCCGTTTTCTTTCTTTCTTTCTTTGGTTTTTTTGTAATTTAGGTGTGGTGACTGCGTGACTGAATAAAAAATTAAATAAAATTAAATCCATTTTGGAATTTAAAACATATTGTTTGTGATACCTTCTCCCTCTCCCTCGAAATCAC GAGAGAGCATATTAATTACACATATTTTAAATATATAAGAAAATTAATAAAATAAATAAATAAAAGATATTTTATTGTTTGTCCACGCAAGCATGAGAGAGGAGCAGAGGCATGGACAAAGGAAGCAAGGCAAATTATCCACAAAAAGACAAAAGGGGGAAATCCAACGGTGGAGGAGCGGCCATCCGCGGAGACACGGAGCCGCTAGCACCCAAGTCTTTGGAATCTCATCCCAAAAGAATGAAAAGTGTTTTAGTATGACCACGCGCTCTCCCGTTGCGTGCATCTTCACCTCACCCTCAAACTAACCCAACCTTAACCACAGTTAGTTATCCTCCCCACGCCCCCCTTTCCCTCTTATATATACCCCCTCTTTCCGATTTCCCCCGATTGCTCGCACCCACCTTTCTCATCCCTGATTTCCATGCCACTCACCATTTCCTCCATTTTACCGTCGTCGTACCAAGCATGAGTTGCAACGGTTGCCGCGTTCTTCGAAAGGGCTGCAGCGAGTCCTGTATTCTTCGCCCTTGCTTGCAGTGGATTGAGACCTCCGAGGCCCAAGGCCACGCCACTGTCTTCGTCGCCAAGTTCTTCGGCCGCGCCGGCCTTATGTCCTTCATCTCCGCTGTCCCCGAATCTCAGCGACCTTCTTTGTTTCAGTCTTTGTTGTTCGAAGCCTGTGGACGCACTGTTAATCCCGTCAACGGCGCCGTTGGCCTTCTATGGACTGGCAACTGGCATGTTTGTCAAGCCGCCGTTGACACCGTCTTACGAGGCGGCACGTTGCGGCCGATCAACGATTTCCTCGCCGCTGGTTCTCCCAATCTTTCCTCCGACGACACTTCCGAGGCTGAAGTCGCCTGTACCGACATGTGGAAGCTACGAGATTCTTATCCCAATTCACGATTCTCCAACTCCCGATCCAGGCTCTCTCCGAAACGCAAGCGATCCGAGGAATCATCCACCAAGAACCAACTGAACGACCTAAATCTCCGGTTGACTCCTACTTTTGTATCCAAATCAACCCCGCGCGCCGCTACACCGTCAATGAATTCTGAGGAATCCGAGACCACTACGTGCTTCGAGAGTGGCCTGGGGGATCACCATCACTACTATCCAGAAGAAGGAACCGCCCAACGGAAGCTTCTTAATTTGTTCGTCTAAGGACCAAATTTTTGTTACACACGTTTGGCTTCATGTGGTGCTGTGAATCAGAGGTTCACAGCCGCAAAGACAGGCCATATTAGGCGAAAATTTTTGTGGGTTTTACTTAAGAAAGATAACCGGAAGGGAAGTAAGGGAGGTTCAGCCGTGAAAGTGAAGATTCCGGCGAGTTTTGTTGATCGTAATTGTAACATCCATCCCACCGGTACAGGATTTCACTCCTCTGTCGAGGCAGAGAAGTGAGAAATGAGCGTCTGTCGGTGGTTGTCCCGTTTTCTTTCTTTCTTTCTTTGGTTTTTTTGTAATTTAGGTGTGGTGACTGCGTGACTGAATAAAAAATTAAATAAAATTAAATCCATTTTGGAATTTAAAACATATTGTTTGTGATACCTTCTCCCTCTCCCTCGAAATCAC ATGAGTTGCAACGGTTGCCGCGTTCTTCGAAAGGGCTGCAGCGAGTCCTGTATTCTTCGCCCTTGCTTGCAGTGGATTGAGACCTCCGAGGCCCAAGGCCACGCCACTGTCTTCGTCGCCAAGTTCTTCGGCCGCGCCGGCCTTATGTCCTTCATCTCCGCTGTCCCCGAATCTCAGCGACCTTCTTTGTTTCAGTCTTTGTTGTTCGAAGCCTGTGGACGCACTGTTAATCCCGTCAACGGCGCCGTTGGCCTTCTATGGACTGGCAACTGGCATGTTTGTCAAGCCGCCGTTGACACCGTCTTACGAGGCGGCACGTTGCGGCCGATCAACGATTTCCTCGCCGCTGGTTCTCCCAATCTTTCCTCCGACGACACTTCCGAGGCTGAAGTCGCCTGTACCGACATGTGGAAGCTACGAGATTCTTATCCCAATTCACGATTCTCCAACTCCCGATCCAGGCTCTCTCCGAAACGCAAGCGATCCGAGGAATCATCCACCAAGAACCAACTGAACGACCTAAATCTCCGGTTGACTCCTACTTTTGTATCCAAATCAACCCCGCGCGCCGCTACACCGTCAATGAATTCTGAGGAATCCGAGACCACTACGTGCTTCGAGAGTGGCCTGGGGGATCACCATCACTACTATCCAGAAGAAGGAACCGCCCAACGGAAGCTTCTTAATTTGTTCGTCTAA MSCNGCRVLRKGCSESCILRPCLQWIETSEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVDTVLRGGTLRPINDFLAAGSPNLSSDDTSEAEVACTDMWKLRDSYPNSRFSNSRSRLSPKRKRSEESSTKNQLNDLNLRLTPTFVSKSTPRAATPSMNSEESETTTCFESGLGDHHHYYPEEGTAQRKLLNLFV Homology
BLAST of CmaCh03G009320 vs. ExPASy Swiss-Prot
Match: Q9FN11 (LOB domain-containing protein 37 OS=Arabidopsis thaliana OX=3702 GN=LBD37 PE=2 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 4.2e-71 Identity = 152/254 (59.84%), Postives = 183/254 (72.05%), Query Frame = 0
BLAST of CmaCh03G009320 vs. ExPASy Swiss-Prot
Match: Q9SN23 (LOB domain-containing protein 38 OS=Arabidopsis thaliana OX=3702 GN=LBD38 PE=1 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 8.8e-69 Identity = 154/251 (61.35%), Postives = 181/251 (72.11%), Query Frame = 0
BLAST of CmaCh03G009320 vs. ExPASy Swiss-Prot
Match: Q9SZE8 (LOB domain-containing protein 39 OS=Arabidopsis thaliana OX=3702 GN=LBD39 PE=2 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 1.0e-64 Identity = 143/250 (57.20%), Postives = 171/250 (68.40%), Query Frame = 0
BLAST of CmaCh03G009320 vs. ExPASy Swiss-Prot
Match: Q9ZW96 (LOB domain-containing protein 40 OS=Arabidopsis thaliana OX=3702 GN=LBD40 PE=2 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 6.4e-43 Identity = 73/110 (66.36%), Postives = 97/110 (88.18%), Query Frame = 0
BLAST of CmaCh03G009320 vs. ExPASy Swiss-Prot
Match: Q9M886 (LOB domain-containing protein 41 OS=Arabidopsis thaliana OX=3702 GN=LBD41 PE=2 SV=1) HSP 1 Score: 162.5 bits (410), Expect = 5.6e-39 Identity = 86/175 (49.14%), Postives = 111/175 (63.43%), Query Frame = 0
BLAST of CmaCh03G009320 vs. ExPASy TrEMBL
Match: A0A6J1IQ63 (LOB domain-containing protein 37-like OS=Cucurbita maxima OX=3661 GN=LOC111477822 PE=3 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 1.2e-129 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0
BLAST of CmaCh03G009320 vs. ExPASy TrEMBL
Match: A0A6J1GDR9 (LOB domain-containing protein 37-like OS=Cucurbita moschata OX=3662 GN=LOC111453254 PE=3 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 1.2e-129 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0
BLAST of CmaCh03G009320 vs. ExPASy TrEMBL
Match: A0A5D3CP44 (LOB domain-containing protein 37-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004160 PE=3 SV=1) HSP 1 Score: 451.8 bits (1161), Expect = 1.7e-123 Identity = 221/232 (95.26%), Postives = 229/232 (98.71%), Query Frame = 0
BLAST of CmaCh03G009320 vs. ExPASy TrEMBL
Match: A0A1S3B1K4 (LOB domain-containing protein 37-like OS=Cucumis melo OX=3656 GN=LOC103484839 PE=3 SV=1) HSP 1 Score: 451.8 bits (1161), Expect = 1.7e-123 Identity = 221/232 (95.26%), Postives = 229/232 (98.71%), Query Frame = 0
BLAST of CmaCh03G009320 vs. ExPASy TrEMBL
Match: A0A5A7T4Z4 (LOB domain-containing protein 37-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold18G002350 PE=3 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 8.4e-123 Identity = 222/234 (94.87%), Postives = 229/234 (97.86%), Query Frame = 0
BLAST of CmaCh03G009320 vs. NCBI nr
Match: XP_022950056.1 (LOB domain-containing protein 37-like [Cucurbita moschata] >XP_022977503.1 LOB domain-containing protein 37-like [Cucurbita maxima] >KAG6604138.1 LOB domain-containing protein 38, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034300.1 LOB domain-containing protein 38 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 472.2 bits (1214), Expect = 2.5e-129 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 0
BLAST of CmaCh03G009320 vs. NCBI nr
Match: XP_023543775.1 (LOB domain-containing protein 37-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 469.2 bits (1206), Expect = 2.1e-128 Identity = 230/232 (99.14%), Postives = 231/232 (99.57%), Query Frame = 0
BLAST of CmaCh03G009320 vs. NCBI nr
Match: XP_008440364.1 (PREDICTED: LOB domain-containing protein 37-like [Cucumis melo] >TYK12824.1 LOB domain-containing protein 37-like [Cucumis melo var. makuwa]) HSP 1 Score: 451.8 bits (1161), Expect = 3.5e-123 Identity = 221/232 (95.26%), Postives = 229/232 (98.71%), Query Frame = 0
BLAST of CmaCh03G009320 vs. NCBI nr
Match: KAA0036429.1 (LOB domain-containing protein 37-like [Cucumis melo var. makuwa]) HSP 1 Score: 449.5 bits (1155), Expect = 1.7e-122 Identity = 222/234 (94.87%), Postives = 229/234 (97.86%), Query Frame = 0
BLAST of CmaCh03G009320 vs. NCBI nr
Match: XP_004141875.1 (LOB domain-containing protein 37 [Cucumis sativus] >KGN48597.1 hypothetical protein Csa_003218 [Cucumis sativus]) HSP 1 Score: 445.3 bits (1144), Expect = 3.3e-121 Identity = 219/233 (93.99%), Postives = 227/233 (97.42%), Query Frame = 0
BLAST of CmaCh03G009320 vs. TAIR 10
Match: AT5G67420.1 (LOB domain-containing protein 37 ) HSP 1 Score: 269.2 bits (687), Expect = 3.0e-72 Identity = 152/254 (59.84%), Postives = 183/254 (72.05%), Query Frame = 0
BLAST of CmaCh03G009320 vs. TAIR 10
Match: AT3G49940.1 (LOB domain-containing protein 38 ) HSP 1 Score: 261.5 bits (667), Expect = 6.3e-70 Identity = 154/251 (61.35%), Postives = 181/251 (72.11%), Query Frame = 0
BLAST of CmaCh03G009320 vs. TAIR 10
Match: AT4G37540.1 (LOB domain-containing protein 39 ) HSP 1 Score: 248.1 bits (632), Expect = 7.2e-66 Identity = 143/250 (57.20%), Postives = 171/250 (68.40%), Query Frame = 0
BLAST of CmaCh03G009320 vs. TAIR 10
Match: AT1G67100.1 (LOB domain-containing protein 40 ) HSP 1 Score: 175.6 bits (444), Expect = 4.5e-44 Identity = 73/110 (66.36%), Postives = 97/110 (88.18%), Query Frame = 0
BLAST of CmaCh03G009320 vs. TAIR 10
Match: AT3G02550.1 (LOB domain-containing protein 41 ) HSP 1 Score: 162.5 bits (410), Expect = 4.0e-40 Identity = 86/175 (49.14%), Postives = 111/175 (63.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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