CmaCh03G009200 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G009200
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ARM repeat superfamily protein, putative isoform 1
Location	Cma_Chr03: 6639897 .. 6640703 (-)
RNA-Seq Expression	CmaCh03G009200
Synteny	CmaCh03G009200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGGACAATGCTCGTTCACTAAGGATAGCTCTAGCAGATCTCCTCCTCCTGATCAGGGATGTTCGTGATTTCCAGTTTAACAAGGTCAGGGCATCCTATAACTAATTTTTGTAGTAAAATTTCTGCAAAGGCGGGTTGTGTCCATAATGTATCCCCAAATCTTTCTGCAGGTTGTCAGTTTAGATGTATTGTTGACTGTTCATGCACATGACCAACCCATTATTAGTAAGAAAATTACTAGATTGCTGATGTCATCGTATTTTCCCACCAAAGTATCAATTGAAGAGGCAAGATTTTTTGAATTTGCTGCTTCAGAAGGGGCATCTCTTAAGTCCATTGTGGAACTTGTTCGAGTACTAATCAATTTGGTTTCGTCCTCTGCCGAGCTAGATGCAAATTACATTGATGGTTTAATTCTTTCAGCTAAATACCTATGCGGCTGCATTTCAAGCGAGCCATGTTACAAGATCGATCTCAAAGATTTGTTCACCGCTGAAAAATTGAAATGCTTGGTCTCTGTAGCAGAATCTGGGCGTGCTCGATCTTCTTTATTCAACATTGTTTCCTCGTTCTCTCCTAATGGTCTTACGGGTCTTCTTGAGGAGTGCATGCAATTAATTACTAATTGTCGTGGTTTATCAGGAAACATAGAAAAGCAAGCTGAAGTGAGGTCTGGCCATAAAGTTTTTCCAGGCTTGTGATGCATTGGATGTTATGTTCGAAGCCATGGCATTGATACTACAGAAGTCTGCTTATCCTTGCCACATTAATTTTGGAACTGATATACCAAAGCTCAGTGGTTGA

mRNA sequence

ATGCTGGACAATGCTCGTTCACTAAGGATAGCTCTAGCAGATCTCCTCCTCCTGATCAGGGATGTTCGTGATTTCCAGTTTAACAAGGTTGTCAGTTTAGATGTATTGTTGACTGTTCATGCACATGACCAACCCATTATTAGTAAGAAAATTACTAGATTGCTGATGTCATCGTATTTTCCCACCAAAGTATCAATTGAAGAGGCAAGATTTTTTGAATTTGCTGCTTCAGAAGGGGCATCTCTTAAGTCCATTGTGGAACTTGTTCGAGTACTAATCAATTTGGTTTCGTCCTCTGCCGAGCTAGATGCAAATTACATTGATGGTTTAATTCTTTCAGCTAAATACCTATGCGGCTGCATTTCAAGCGAGCCATGTTACAAGATCGATCTCAAAGATTTGTTCACCGCTGAAAAATTGAAATGCTTGGTCTCTGTAGCAGAATCTGGGCGTGCTCGATCTTCTTTATTCAACATTGTTTCCTCGTTCTCTCCTAATGGTCTTACGGGTCTTCTTGAGGAGTGCATGCAATTAATTACTAATTGTCGTGGTTTATCAGGAAACATAGAAAAGCAAGCTGAAGTGAGGTCTGGCCATAAAGCTTGTGATGCATTGGATGTTATGTTCGAAGCCATGGCATTGATACTACAGAAGTCTGCTTATCCTTGCCACATTAATTTTGGAACTGATATACCAAAGCTCAGTGGTTGA

Coding sequence (CDS)

ATGCTGGACAATGCTCGTTCACTAAGGATAGCTCTAGCAGATCTCCTCCTCCTGATCAGGGATGTTCGTGATTTCCAGTTTAACAAGGTTGTCAGTTTAGATGTATTGTTGACTGTTCATGCACATGACCAACCCATTATTAGTAAGAAAATTACTAGATTGCTGATGTCATCGTATTTTCCCACCAAAGTATCAATTGAAGAGGCAAGATTTTTTGAATTTGCTGCTTCAGAAGGGGCATCTCTTAAGTCCATTGTGGAACTTGTTCGAGTACTAATCAATTTGGTTTCGTCCTCTGCCGAGCTAGATGCAAATTACATTGATGGTTTAATTCTTTCAGCTAAATACCTATGCGGCTGCATTTCAAGCGAGCCATGTTACAAGATCGATCTCAAAGATTTGTTCACCGCTGAAAAATTGAAATGCTTGGTCTCTGTAGCAGAATCTGGGCGTGCTCGATCTTCTTTATTCAACATTGTTTCCTCGTTCTCTCCTAATGGTCTTACGGGTCTTCTTGAGGAGTGCATGCAATTAATTACTAATTGTCGTGGTTTATCAGGAAACATAGAAAAGCAAGCTGAAGTGAGGTCTGGCCATAAAGCTTGTGATGCATTGGATGTTATGTTCGAAGCCATGGCATTGATACTACAGAAGTCTGCTTATCCTTGCCACATTAATTTTGGAACTGATATACCAAAGCTCAGTGGTTGA

Protein sequence

MLDNARSLRIALADLLLLIRDVRDFQFNKVVSLDVLLTVHAHDQPIISKKITRLLMSSYFPTKVSIEEARFFEFAASEGASLKSIVELVRVLINLVSSSAELDANYIDGLILSAKYLCGCISSEPCYKIDLKDLFTAEKLKCLVSVAESGRARSSLFNIVSSFSPNGLTGLLEECMQLITNCRGLSGNIEKQAEVRSGHKACDALDVMFEAMALILQKSAYPCHINFGTDIPKLSG

Homology

[Close]

BLAST of CmaCh03G009200 vs. ExPASy TrEMBL
Match: A0A6J1KXD0 (uncharacterized protein LOC111497213 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111497213 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.2e-97
Identity = 199/254 (78.35%), Postives = 215/254 (84.65%), Query Frame = 0


Query: 1   MLDNARSLRIALADLLLLIRDVRDFQFNKVVSLDVLLTVHAHDQPIISKKITRLLMSSYF 60
           MLDNA S+R+ALAD+LLLIRDVRDFQFNKVVSLDVLLTV AHDQPIIS+KITRLL+ SYF
Sbjct: 496 MLDNALSVRVALADILLLIRDVRDFQFNKVVSLDVLLTVLAHDQPIISQKITRLLIPSYF 555

Query: 61  PTKVSIEE----------------ARFFEFAASEGASLKSIVELVRVLINLVSSSAELDA 120
           PTK+SIEE                ARF EFAASEGASLKSI ELV+ LINLVSSSA+LD 
Sbjct: 556 PTKISIEEACSRCITLIKRSPMAGARFCEFAASEGASLKSIKELVQALINLVSSSAKLDE 615

Query: 121 NYIDGLILSAKYLCGCISSEPCYKIDLKDLFTAEKLKCLVSVAESGRARSSLFNIVSSFS 180
           NYIDGL+LSAKYLC  ISSE CYK DLKDLFT EKLKCL+SVA SGRARSSLF+IVS FS
Sbjct: 616 NYIDGLLLSAKYLCSSISSELCYKNDLKDLFTGEKLKCLLSVAHSGRARSSLFDIVSMFS 675

Query: 181 PNGLTGLLEECMQLITNCRGLSGNIEKQAEVRSGHK---ACDALDVMFEAMALILQKSAY 236
           P+GLT LLEECMQLITNC GLSG++ KQAEVRSGHK   ACDALDVMFEAM L+LQKSAY
Sbjct: 676 PDGLTDLLEECMQLITNCSGLSGDLAKQAEVRSGHKFFQACDALDVMFEAMTLLLQKSAY 735

[Close]

BLAST of CmaCh03G009200 vs. ExPASy TrEMBL
Match: A0A6J1KNC2 (uncharacterized protein LOC111497213 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111497213 PE=4 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 1.2e-97
Identity = 199/254 (78.35%), Postives = 215/254 (84.65%), Query Frame = 0


Query: 1   MLDNARSLRIALADLLLLIRDVRDFQFNKVVSLDVLLTVHAHDQPIISKKITRLLMSSYF 60
           MLDNA S+R+ALAD+LLLIRDVRDFQFNKVVSLDVLLTV AHDQPIIS+KITRLL+ SYF
Sbjct: 496 MLDNALSVRVALADILLLIRDVRDFQFNKVVSLDVLLTVLAHDQPIISQKITRLLIPSYF 555

Query: 61  PTKVSIEE----------------ARFFEFAASEGASLKSIVELVRVLINLVSSSAELDA 120
           PTK+SIEE                ARF EFAASEGASLKSI ELV+ LINLVSSSA+LD 
Sbjct: 556 PTKISIEEACSRCITLIKRSPMAGARFCEFAASEGASLKSIKELVQALINLVSSSAKLDE 615

Query: 121 NYIDGLILSAKYLCGCISSEPCYKIDLKDLFTAEKLKCLVSVAESGRARSSLFNIVSSFS 180
           NYIDGL+LSAKYLC  ISSE CYK DLKDLFT EKLKCL+SVA SGRARSSLF+IVS FS
Sbjct: 616 NYIDGLLLSAKYLCSSISSELCYKNDLKDLFTGEKLKCLLSVAHSGRARSSLFDIVSMFS 675

Query: 181 PNGLTGLLEECMQLITNCRGLSGNIEKQAEVRSGHK---ACDALDVMFEAMALILQKSAY 236
           P+GLT LLEECMQLITNC GLSG++ KQAEVRSGHK   ACDALDVMFEAM L+LQKSAY
Sbjct: 676 PDGLTDLLEECMQLITNCSGLSGDLAKQAEVRSGHKFFQACDALDVMFEAMTLLLQKSAY 735

[Close]

BLAST of CmaCh03G009200 vs. ExPASy TrEMBL
Match: A0A5D3CMN7 (ARM repeat superfamily protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G004070 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.7e-97
Identity = 198/254 (77.95%), Postives = 215/254 (84.65%), Query Frame = 0


Query: 1   MLDNARSLRIALADLLLLIRDVRDFQFNKVVSLDVLLTVHAHDQPIISKKITRLLMSSYF 60
           MLDNA  +R+ALADLLLLIRDVRDFQFNKVVSLDVLLTV AHDQPIIS+KITRLLM SYF
Sbjct: 508 MLDNALLVRVALADLLLLIRDVRDFQFNKVVSLDVLLTVLAHDQPIISQKITRLLMPSYF 567

Query: 61  PTKVSIEE----------------ARFFEFAASEGASLKSIVELVRVLINLVSSSAELDA 120
           PTKVSIEE                ARF EFAAS+GASLKSIV+LVR LI+LVSSSA+LD 
Sbjct: 568 PTKVSIEEACSRCITLIRRSPMAGARFCEFAASQGASLKSIVQLVRTLIDLVSSSAKLDE 627

Query: 121 NYIDGLILSAKYLCGCISSEPCYKIDLKDLFTAEKLKCLVSVAESGRARSSLFNIVSSFS 180
           +YIDGL+LSAKYLC CIS EPCYK DLKDLFTAEKLKCL+SVA+S  ARSSLFNIVSSFS
Sbjct: 628 SYIDGLLLSAKYLCSCISKEPCYKFDLKDLFTAEKLKCLLSVAQSRCARSSLFNIVSSFS 687

Query: 181 PNGLTGLLEECMQLITNCRGLSGNIEKQAEVRSGHK---ACDALDVMFEAMALILQKSAY 236
           P+  T LLEECMQLITNCRGLS +IEKQAEVRSGH+   ACDALD+MFEAM+LILQK AY
Sbjct: 688 PDDFTDLLEECMQLITNCRGLSEDIEKQAEVRSGHRFFLACDALDIMFEAMSLILQKFAY 747

[Close]

BLAST of CmaCh03G009200 vs. ExPASy TrEMBL
Match: A0A1S4DTW2 (uncharacterized protein LOC103484848 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484848 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.7e-97
Identity = 198/254 (77.95%), Postives = 215/254 (84.65%), Query Frame = 0


Query: 1   MLDNARSLRIALADLLLLIRDVRDFQFNKVVSLDVLLTVHAHDQPIISKKITRLLMSSYF 60
           MLDNA  +R+ALADLLLLIRDVRDFQFNKVVSLDVLLTV AHDQPIIS+KITRLLM SYF
Sbjct: 545 MLDNALLVRVALADLLLLIRDVRDFQFNKVVSLDVLLTVLAHDQPIISQKITRLLMPSYF 604

Query: 61  PTKVSIEE----------------ARFFEFAASEGASLKSIVELVRVLINLVSSSAELDA 120
           PTKVSIEE                ARF EFAAS+GASLKSIV+LVR LI+LVSSSA+LD 
Sbjct: 605 PTKVSIEEACSRCITLIRRSPMAGARFCEFAASQGASLKSIVQLVRTLIDLVSSSAKLDE 664

Query: 121 NYIDGLILSAKYLCGCISSEPCYKIDLKDLFTAEKLKCLVSVAESGRARSSLFNIVSSFS 180
           +YIDGL+LSAKYLC CIS EPCYK DLKDLFTAEKLKCL+SVA+S  ARSSLFNIVSSFS
Sbjct: 665 SYIDGLLLSAKYLCSCISKEPCYKFDLKDLFTAEKLKCLLSVAQSRCARSSLFNIVSSFS 724

Query: 181 PNGLTGLLEECMQLITNCRGLSGNIEKQAEVRSGHK---ACDALDVMFEAMALILQKSAY 236
           P+  T LLEECMQLITNCRGLS +IEKQAEVRSGH+   ACDALD+MFEAM+LILQK AY
Sbjct: 725 PDDFTDLLEECMQLITNCRGLSEDIEKQAEVRSGHRFFLACDALDIMFEAMSLILQKFAY 784

[Close]

BLAST of CmaCh03G009200 vs. ExPASy TrEMBL
Match: A0A1S3B117 (uncharacterized protein LOC103484848 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484848 PE=4 SV=1)

HSP 1 Score: 364.0 bits (933), Expect = 4.7e-97
Identity = 198/254 (77.95%), Postives = 215/254 (84.65%), Query Frame = 0


Query: 1   MLDNARSLRIALADLLLLIRDVRDFQFNKVVSLDVLLTVHAHDQPIISKKITRLLMSSYF 60
           MLDNA  +R+ALADLLLLIRDVRDFQFNKVVSLDVLLTV AHDQPIIS+KITRLLM SYF
Sbjct: 496 MLDNALLVRVALADLLLLIRDVRDFQFNKVVSLDVLLTVLAHDQPIISQKITRLLMPSYF 555

Query: 61  PTKVSIEE----------------ARFFEFAASEGASLKSIVELVRVLINLVSSSAELDA 120
           PTKVSIEE                ARF EFAAS+GASLKSIV+LVR LI+LVSSSA+LD 
Sbjct: 556 PTKVSIEEACSRCITLIRRSPMAGARFCEFAASQGASLKSIVQLVRTLIDLVSSSAKLDE 615

Query: 121 NYIDGLILSAKYLCGCISSEPCYKIDLKDLFTAEKLKCLVSVAESGRARSSLFNIVSSFS 180
           +YIDGL+LSAKYLC CIS EPCYK DLKDLFTAEKLKCL+SVA+S  ARSSLFNIVSSFS
Sbjct: 616 SYIDGLLLSAKYLCSCISKEPCYKFDLKDLFTAEKLKCLLSVAQSRCARSSLFNIVSSFS 675

Query: 181 PNGLTGLLEECMQLITNCRGLSGNIEKQAEVRSGHK---ACDALDVMFEAMALILQKSAY 236
           P+  T LLEECMQLITNCRGLS +IEKQAEVRSGH+   ACDALD+MFEAM+LILQK AY
Sbjct: 676 PDDFTDLLEECMQLITNCRGLSEDIEKQAEVRSGHRFFLACDALDIMFEAMSLILQKFAY 735

[Close]

BLAST of CmaCh03G009200 vs. NCBI nr
Match: XP_023544870.1 (uncharacterized protein LOC111804340 [Cucurbita pepo subsp. pepo] >XP_023544871.1 uncharacterized protein LOC111804340 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 383.3 bits (983), Expect = 1.6e-102
Identity = 207/219 (94.52%), Postives = 209/219 (95.43%), Query Frame = 0


Query: 1   MLDNARSLRIALADLLLLIRDVRDFQFNKVVSLDVLLTVHAHDQPIISKKITRLLMSSYF 60
           MLDN+ S+RIALADLLLLIRDVRDFQFNKVVSLDVLLTVHAHDQPIISKKITRLLMSSYF
Sbjct: 1   MLDNSLSVRIALADLLLLIRDVRDFQFNKVVSLDVLLTVHAHDQPIISKKITRLLMSSYF 60

Query: 61  PTKVSIEEARFFEFAASEGASLKSIVELVRVLINLVSSSAELDANYIDGLILSAKYLCGC 120
           PTKVSIEEARF EFAASEGASLKSIVE VR LINLVSSSAELDANYIDGLILSAKYL GC
Sbjct: 61  PTKVSIEEARFCEFAASEGASLKSIVEPVRALINLVSSSAELDANYIDGLILSAKYLGGC 120

Query: 121 ISSEPCYKIDLKDLFTAEKLKCLVSVAESGRARSSLFNIVSSFSPNGLTGLLEECMQLIT 180
           IS EPCYKIDLKDLFTAE LKCLVSVAESGRARSSLFNIVSSFSPNGLTGLLEECMQLIT
Sbjct: 121 ISREPCYKIDLKDLFTAENLKCLVSVAESGRARSSLFNIVSSFSPNGLTGLLEECMQLIT 180

Query: 181 NCRGLSGNIEKQAEVRSGHK---ACDALDVMFEAMALIL 217
           NCRGLSGNIEKQAEVRSGHK   ACDALDVMFEAMALIL
Sbjct: 181 NCRGLSGNIEKQAEVRSGHKFFQACDALDVMFEAMALIL 219

[Close]

BLAST of CmaCh03G009200 vs. NCBI nr
Match: KAG7026938.1 (Condensin-2 complex subunit G2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 366.3 bits (939), Expect = 2.0e-97
Identity = 200/254 (78.74%), Postives = 215/254 (84.65%), Query Frame = 0


Query: 1   MLDNARSLRIALADLLLLIRDVRDFQFNKVVSLDVLLTVHAHDQPIISKKITRLLMSSYF 60
           MLDNA S+R+ALAD+LLLIRDVRDFQFNKVVSLDVLLTV AHDQPIIS+KITRLL+ SYF
Sbjct: 496 MLDNALSVRVALADILLLIRDVRDFQFNKVVSLDVLLTVLAHDQPIISQKITRLLIPSYF 555

Query: 61  PTKVSIEE----------------ARFFEFAASEGASLKSIVELVRVLINLVSSSAELDA 120
           PTKVSIEE                ARF EFAASEGASLKSI ELV+ LINLVSSSA+LD 
Sbjct: 556 PTKVSIEEACSRCITLIKRSSMAGARFCEFAASEGASLKSIKELVQALINLVSSSAKLDE 615

Query: 121 NYIDGLILSAKYLCGCISSEPCYKIDLKDLFTAEKLKCLVSVAESGRARSSLFNIVSSFS 180
           NYIDGL+LSAKYLC  ISSE CYK DLKDLFT EKLKCL+SVA SGRARSSLF+IVS FS
Sbjct: 616 NYIDGLLLSAKYLCNSISSELCYKNDLKDLFTGEKLKCLLSVAHSGRARSSLFDIVSMFS 675

Query: 181 PNGLTGLLEECMQLITNCRGLSGNIEKQAEVRSGHK---ACDALDVMFEAMALILQKSAY 236
           P+GLT LLEECMQLITNC GLSG++ KQAEVRSGHK   ACDALDVMFEAM L+LQKSAY
Sbjct: 676 PDGLTDLLEECMQLITNCSGLSGDLAKQAEVRSGHKFFQACDALDVMFEAMTLLLQKSAY 735

[Close]

BLAST of CmaCh03G009200 vs. NCBI nr
Match: KAG6594980.1 (Condensin-2 complex subunit G2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 366.3 bits (939), Expect = 2.0e-97
Identity = 200/254 (78.74%), Postives = 215/254 (84.65%), Query Frame = 0


Query: 1   MLDNARSLRIALADLLLLIRDVRDFQFNKVVSLDVLLTVHAHDQPIISKKITRLLMSSYF 60
           MLDNA S+R+ALAD+LLLIRDVRDFQFNKVVSLDVLLTV AHDQPIIS+KITRLL+ SYF
Sbjct: 496 MLDNALSVRVALADILLLIRDVRDFQFNKVVSLDVLLTVLAHDQPIISQKITRLLIPSYF 555

Query: 61  PTKVSIEE----------------ARFFEFAASEGASLKSIVELVRVLINLVSSSAELDA 120
           PTKVSIEE                ARF EFAASEGASLKSI ELV+ LINLVSSSA+LD 
Sbjct: 556 PTKVSIEEACSRCITLIKRSPMAGARFCEFAASEGASLKSIKELVQALINLVSSSAKLDE 615

Query: 121 NYIDGLILSAKYLCGCISSEPCYKIDLKDLFTAEKLKCLVSVAESGRARSSLFNIVSSFS 180
           NYIDGL+LSAKYLC  ISSE CYK DLKDLFT EKLKCL+SVA SGRARSSLF+IVS FS
Sbjct: 616 NYIDGLLLSAKYLCNSISSELCYKNDLKDLFTGEKLKCLLSVAHSGRARSSLFDIVSMFS 675

Query: 181 PNGLTGLLEECMQLITNCRGLSGNIEKQAEVRSGHK---ACDALDVMFEAMALILQKSAY 236
           P+GLT LLEECMQLITNC GLSG++ KQAEVRSGHK   ACDALDVMFEAM L+LQKSAY
Sbjct: 676 PDGLTDLLEECMQLITNCSGLSGDLAKQAEVRSGHKFFQACDALDVMFEAMTLLLQKSAY 735

[Close]

BLAST of CmaCh03G009200 vs. NCBI nr
Match: XP_023003703.1 (uncharacterized protein LOC111497213 isoform X2 [Cucurbita maxima])

HSP 1 Score: 365.9 bits (938), Expect = 2.6e-97
Identity = 199/254 (78.35%), Postives = 215/254 (84.65%), Query Frame = 0


Query: 1   MLDNARSLRIALADLLLLIRDVRDFQFNKVVSLDVLLTVHAHDQPIISKKITRLLMSSYF 60
           MLDNA S+R+ALAD+LLLIRDVRDFQFNKVVSLDVLLTV AHDQPIIS+KITRLL+ SYF
Sbjct: 496 MLDNALSVRVALADILLLIRDVRDFQFNKVVSLDVLLTVLAHDQPIISQKITRLLIPSYF 555

Query: 61  PTKVSIEE----------------ARFFEFAASEGASLKSIVELVRVLINLVSSSAELDA 120
           PTK+SIEE                ARF EFAASEGASLKSI ELV+ LINLVSSSA+LD 
Sbjct: 556 PTKISIEEACSRCITLIKRSPMAGARFCEFAASEGASLKSIKELVQALINLVSSSAKLDE 615

Query: 121 NYIDGLILSAKYLCGCISSEPCYKIDLKDLFTAEKLKCLVSVAESGRARSSLFNIVSSFS 180
           NYIDGL+LSAKYLC  ISSE CYK DLKDLFT EKLKCL+SVA SGRARSSLF+IVS FS
Sbjct: 616 NYIDGLLLSAKYLCSSISSELCYKNDLKDLFTGEKLKCLLSVAHSGRARSSLFDIVSMFS 675

Query: 181 PNGLTGLLEECMQLITNCRGLSGNIEKQAEVRSGHK---ACDALDVMFEAMALILQKSAY 236
           P+GLT LLEECMQLITNC GLSG++ KQAEVRSGHK   ACDALDVMFEAM L+LQKSAY
Sbjct: 676 PDGLTDLLEECMQLITNCSGLSGDLAKQAEVRSGHKFFQACDALDVMFEAMTLLLQKSAY 735

[Close]

BLAST of CmaCh03G009200 vs. NCBI nr
Match: XP_023003702.1 (uncharacterized protein LOC111497213 isoform X1 [Cucurbita maxima])

HSP 1 Score: 365.9 bits (938), Expect = 2.6e-97
Identity = 199/254 (78.35%), Postives = 215/254 (84.65%), Query Frame = 0


Query: 1   MLDNARSLRIALADLLLLIRDVRDFQFNKVVSLDVLLTVHAHDQPIISKKITRLLMSSYF 60
           MLDNA S+R+ALAD+LLLIRDVRDFQFNKVVSLDVLLTV AHDQPIIS+KITRLL+ SYF
Sbjct: 496 MLDNALSVRVALADILLLIRDVRDFQFNKVVSLDVLLTVLAHDQPIISQKITRLLIPSYF 555

Query: 61  PTKVSIEE----------------ARFFEFAASEGASLKSIVELVRVLINLVSSSAELDA 120
           PTK+SIEE                ARF EFAASEGASLKSI ELV+ LINLVSSSA+LD 
Sbjct: 556 PTKISIEEACSRCITLIKRSPMAGARFCEFAASEGASLKSIKELVQALINLVSSSAKLDE 615

Query: 121 NYIDGLILSAKYLCGCISSEPCYKIDLKDLFTAEKLKCLVSVAESGRARSSLFNIVSSFS 180
           NYIDGL+LSAKYLC  ISSE CYK DLKDLFT EKLKCL+SVA SGRARSSLF+IVS FS
Sbjct: 616 NYIDGLLLSAKYLCSSISSELCYKNDLKDLFTGEKLKCLLSVAHSGRARSSLFDIVSMFS 675

Query: 181 PNGLTGLLEECMQLITNCRGLSGNIEKQAEVRSGHK---ACDALDVMFEAMALILQKSAY 236
           P+GLT LLEECMQLITNC GLSG++ KQAEVRSGHK   ACDALDVMFEAM L+LQKSAY
Sbjct: 676 PDGLTDLLEECMQLITNCSGLSGDLAKQAEVRSGHKFFQACDALDVMFEAMTLLLQKSAY 735

[Close]

BLAST of CmaCh03G009200 vs. TAIR 10
Match: AT1G64960.1 (ARM repeat superfamily protein )

HSP 1 Score: 181.4 bits (459), Expect = 8.4e-46
Identity = 107/252 (42.46%), Postives = 156/252 (61.90%), Query Frame = 0


Query: 1   MLDNARSLRIALADLLLLIRDVRDFQFNKVVSLDVLLTVHAHDQPIISKKITRLLMSSYF 60
           MLD+  S+R+A+ DLLLLIRDVR FQFN VVSLDVLL+V A DQ  ++K I RLL+ SYF
Sbjct: 481 MLDSVTSVRVAMVDLLLLIRDVRAFQFNTVVSLDVLLSVLASDQTHVAKGIARLLIPSYF 540

Query: 61  PTKVSIEE----------------ARFFEFAASEGASLKSIVELVRVLINLVSSSAELDA 120
           P++   EE                ARF EF  S GA++KS++ LV   +N V S  +L  
Sbjct: 541 PSRKRAEEACQRCRTLINRNPKAGARFCEFLVSLGATVKSVLHLVGFFLNSVLSGDKLLE 600

Query: 121 NYIDGLILSAKYLCGCISSEPCYKIDLKDLFTAEKLKCLVSVAESGRARSSLFNIVSSFS 180
           N  +GL+ +A YLC  + ++      LK+L   EKLK L++ A + +A+SS+ +I++  S
Sbjct: 601 NQTEGLLRAAYYLCKDLVADSGCMASLKELLPGEKLKSLLAFAPTAQAQSSVIDIITMVS 660

Query: 181 PNGLTGLLEECMQLITNCRGLSGNIEKQAEVRSGHK---ACDALDVMFEAMALILQKSAY 234
           P+ ++ +LE+CM L+ NC GL  +  +Q E+RS HK   + +A   +      I+QK+AY
Sbjct: 661 PDIVSEVLEDCMNLVVNCGGLPSDAGRQTELRSVHKLLLSSNAFCDLIGTFTSIMQKTAY 720

The following BLAST results are available for this feature:

BLAST of CmaCh03G009200 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G009200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KXD0	1.2e-97	78.35	uncharacterized protein LOC111497213 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1KNC2	1.2e-97	78.35	uncharacterized protein LOC111497213 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5D3CMN7	4.7e-97	77.95	ARM repeat superfamily protein, putative isoform 1 OS=Cucumis melo var. makuwa O...	[more]
A0A1S4DTW2	4.7e-97	77.95	uncharacterized protein LOC103484848 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3B117	4.7e-97	77.95	uncharacterized protein LOC103484848 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of CmaCh03G009200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023544870.1	1.6e-102	94.52	uncharacterized protein LOC111804340 [Cucurbita pepo subsp. pepo] >XP_023544871....	[more]
KAG7026938.1	2.0e-97	78.74	Condensin-2 complex subunit G2, partial [Cucurbita argyrosperma subsp. argyrospe...	[more]
KAG6594980.1	2.0e-97	78.74	Condensin-2 complex subunit G2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023003703.1	2.6e-97	78.35	uncharacterized protein LOC111497213 isoform X2 [Cucurbita maxima]	[more]
XP_023003702.1	2.6e-97	78.35	uncharacterized protein LOC111497213 isoform X1 [Cucurbita maxima]	[more]

BLAST of CmaCh03G009200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G64960.1	8.4e-46	42.46	ARM repeat superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR16199	CONDENSIN-2 COMPLEX SUBUNIT G2	coord: 1..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G009200.1	CmaCh03G009200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000070	mitotic sister chromatid segregation
cellular_component	GO:0000796	condensin complex
cellular_component	GO:0005634	nucleus