CmaCh03G009020 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGAGCAACAAAGAAAACAAGTTGAGCCAACTGATAAAAGCCTCCAGCCGGCTGCTGTCGAAGGTCCGAGATTTCTACGTTAGGAGCCTGACGGATTGCTCGAACCACCTGGATTATGGGATGGCGCTGACCGGGCCGACCAGTCAGGTGCCCACCACTCTCCCCAAGAGTTACAGCGTGGGGTCCACCGTCTCCAGCCACGGTAGTGATGACTTCAGGGAGCTTCTGAGGGCCGCCTCCACTCGAAGCTTGAGCAAGAATGTGGAACCCGATTTCCAAATCCAAGCGGCGAGGAAATCGCCGATGGCGGAACCGAATAACGTGCCGAGGAGCCAGAGCGTGGGGATTGGGAGAATTGACGAAGAGAAAACTTGTGAATTTGAAGAGGATTTCAAGGTATGTAATACTGATGCGTACCCCAGAAGCAGAAGCTATGCTGTTCGTAGAAGAAGACGGGTGTATTGA ATGAAGAAGAGCAACAAAGAAAACAAGTTGAGCCAACTGATAAAAGCCTCCAGCCGGCTGCTGTCGAAGGTCCGAGATTTCTACGTTAGGAGCCTGACGGATTGCTCGAACCACCTGGATTATGGGATGGCGCTGACCGGGCCGACCAGTCAGGTGCCCACCACTCTCCCCAAGAGTTACAGCGTGGGGTCCACCGTCTCCAGCCACGGTAGTGATGACTTCAGGGAGCTTCTGAGGGCCGCCTCCACTCGAAGCTTGAGCAAGAATGTGGAACCCGATTTCCAAATCCAAGCGGCGAGGAAATCGCCGATGGCGGAACCGAATAACGTGCCGAGGAGCCAGAGCGTGGGGATTGGGAGAATTGACGAAGAGAAAACTTGTGAATTTGAAGAGGATTTCAAGGTATGTAATACTGATGCGTACCCCAGAAGCAGAAGCTATGCTGTTCGTAGAAGAAGACGGGTGTATTGA ATGAAGAAGAGCAACAAAGAAAACAAGTTGAGCCAACTGATAAAAGCCTCCAGCCGGCTGCTGTCGAAGGTCCGAGATTTCTACGTTAGGAGCCTGACGGATTGCTCGAACCACCTGGATTATGGGATGGCGCTGACCGGGCCGACCAGTCAGGTGCCCACCACTCTCCCCAAGAGTTACAGCGTGGGGTCCACCGTCTCCAGCCACGGTAGTGATGACTTCAGGGAGCTTCTGAGGGCCGCCTCCACTCGAAGCTTGAGCAAGAATGTGGAACCCGATTTCCAAATCCAAGCGGCGAGGAAATCGCCGATGGCGGAACCGAATAACGTGCCGAGGAGCCAGAGCGTGGGGATTGGGAGAATTGACGAAGAGAAAACTTGTGAATTTGAAGAGGATTTCAAGGTATGTAATACTGATGCGTACCCCAGAAGCAGAAGCTATGCTGTTCGTAGAAGAAGACGGGTGTATTGA MKKSNKENKLSQLIKASSRLLSKVRDFYVRSLTDCSNHLDYGMALTGPTSQVPTTLPKSYSVGSTVSSHGSDDFRELLRAASTRSLSKNVEPDFQIQAARKSPMAEPNNVPRSQSVGIGRIDEEKTCEFEEDFKVCNTDAYPRSRSYAVRRRRRVY Homology
BLAST of CmaCh03G009020 vs. ExPASy TrEMBL
Match: A0A6J1INU9 (uncharacterized protein LOC111478121 OS=Cucurbita maxima OX=3661 GN=LOC111478121 PE=4 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 8.6e-79 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of CmaCh03G009020 vs. ExPASy TrEMBL
Match: A0A6J1GGE2 (uncharacterized protein LOC111453674 OS=Cucurbita moschata OX=3662 GN=LOC111453674 PE=4 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 2.6e-75 Identity = 150/156 (96.15%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of CmaCh03G009020 vs. ExPASy TrEMBL
Match: A0A6J1BT69 (uncharacterized protein LOC111005494 OS=Momordica charantia OX=3673 GN=LOC111005494 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 4.4e-59 Identity = 123/152 (80.92%), Postives = 134/152 (88.16%), Query Frame = 0
BLAST of CmaCh03G009020 vs. ExPASy TrEMBL
Match: A0A6J1KQT3 (uncharacterized protein LOC111497419 OS=Cucurbita maxima OX=3661 GN=LOC111497419 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 3.3e-54 Identity = 119/155 (76.77%), Postives = 131/155 (84.52%), Query Frame = 0
BLAST of CmaCh03G009020 vs. ExPASy TrEMBL
Match: A0A6J1HD82 (uncharacterized protein LOC111463079 OS=Cucurbita moschata OX=3662 GN=LOC111463079 PE=4 SV=1) HSP 1 Score: 218.4 bits (555), Expect = 2.1e-53 Identity = 118/155 (76.13%), Postives = 128/155 (82.58%), Query Frame = 0
BLAST of CmaCh03G009020 vs. NCBI nr
Match: XP_022978000.1 (uncharacterized protein LOC111478121 [Cucurbita maxima]) HSP 1 Score: 302.8 bits (774), Expect = 1.8e-78 Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0
BLAST of CmaCh03G009020 vs. NCBI nr
Match: XP_022950634.1 (uncharacterized protein LOC111453674 [Cucurbita moschata]) HSP 1 Score: 291.2 bits (744), Expect = 5.3e-75 Identity = 150/156 (96.15%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of CmaCh03G009020 vs. NCBI nr
Match: KAG7034279.1 (hypothetical protein SDJN02_04006, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 290.8 bits (743), Expect = 6.9e-75 Identity = 150/156 (96.15%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of CmaCh03G009020 vs. NCBI nr
Match: XP_023543992.1 (uncharacterized protein LOC111803699 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 288.9 bits (738), Expect = 2.6e-74 Identity = 149/156 (95.51%), Postives = 151/156 (96.79%), Query Frame = 0
BLAST of CmaCh03G009020 vs. NCBI nr
Match: KAG6604116.1 (hypothetical protein SDJN03_04725, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 287.7 bits (735), Expect = 5.9e-74 Identity = 149/156 (95.51%), Postives = 151/156 (96.79%), Query Frame = 0
BLAST of CmaCh03G009020 vs. TAIR 10
Match: AT1G58420.1 (Uncharacterised conserved protein UCP031279 ) HSP 1 Score: 69.3 bits (168), Expect = 3.1e-12 Identity = 59/177 (33.33%), Postives = 83/177 (46.89%), Query Frame = 0
BLAST of CmaCh03G009020 vs. TAIR 10
Match: AT1G10140.1 (Uncharacterised conserved protein UCP031279 ) HSP 1 Score: 69.3 bits (168), Expect = 3.1e-12 Identity = 56/161 (34.78%), Postives = 79/161 (49.07%), Query Frame = 0
BLAST of CmaCh03G009020 vs. TAIR 10
Match: AT4G37700.1 (unknown protein; Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 9.5e-06 Identity = 51/153 (33.33%), Postives = 76/153 (49.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|