CmaCh03G006630 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh03G006630
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr03: 5555275 .. 5555625 (+)
RNA-Seq ExpressionCmaCh03G006630
SyntenyCmaCh03G006630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACTCAACCATGGAGAATCTTGATATGCTTCCCCACGGTGGTGCCCCTCAGTTGGTTAGATATCCATCCTTGGAGGCAGAAAACCTTGAGTCATCTGGGAGAAGACAAGTAAAAATGGTTCTGCAAAGGAAGTAAAAATGCTGGCTGATCTTTCTTCATTGTCAATTTAGAGAGACTGACCTTCTTTGGATGCTGGTTGCAGCTGCTGCTCCATCATGAAGGCCTTTTTCCTTTTTCTCTTTTTCTTTTCTCCCTTTTTTTCCAAGACTTCTTATGGTTTGCTCTATAAATGATGATGTCAAATGGAATAACTTTGCATATGGTACTTGTAACTTTTTGAATACTTAA

mRNA sequence

ATGTACTCAACCATGGAGAATCTTGATATGCTTCCCCACGGTGGTGCCCCTCAGTTGGTTAGATATCCATCCTTGGAGGCAGAAAACCTTGAGTCATCTGGGAGAAGACAAGTAAAAATGGTTCTGCAAAGGAAGCCTTTTTCCTTTTTCTCTTTTTCTTTTCTCCCTTTTTTTCCAAGACTTCTTATGGTTTGCTCTATAAATGATGATGTCAAATGGAATAACTTTGCATATGGTACTTGTAACTTTTTGAATACTTAA

Coding sequence (CDS)

ATGTACTCAACCATGGAGAATCTTGATATGCTTCCCCACGGTGGTGCCCCTCAGTTGGTTAGATATCCATCCTTGGAGGCAGAAAACCTTGAGTCATCTGGGAGAAGACAAGTAAAAATGGTTCTGCAAAGGAAGCCTTTTTCCTTTTTCTCTTTTTCTTTTCTCCCTTTTTTTCCAAGACTTCTTATGGTTTGCTCTATAAATGATGATGTCAAATGGAATAACTTTGCATATGGTACTTGTAACTTTTTGAATACTTAA

Protein sequence

MYSTMENLDMLPHGGAPQLVRYPSLEAENLESSGRRQVKMVLQRKPFSFFSFSFLPFFPRLLMVCSINDDVKWNNFAYGTCNFLNT
Homology
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BLAST of CmaCh03G006630 vs. NCBI nr
Match: KAG7034072.1 (hypothetical protein SDJN02_03799, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 80.9 bits (198), Expect = 6.0e-12
Identity = 45/57 (78.95%), Postives = 46/57 (80.70%), Query Frame = 0 

Query: 5  MENLD-MLPHGGAPQLVRYPSLEAENLESSGRRQVKMVLQRKPFS-------FFSFS 54
          MENLD MLPHGGAPQLVRYPSLEAENLESSGRR+VKMVLQR P S        FSFS
Sbjct: 1  MENLDMMLPHGGAPQLVRYPSLEAENLESSGRRRVKMVLQRNPSSHSPTDLRLFSFS 57

The following BLAST results are available for this feature:
BLAST of CmaCh03G006630 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh03G006630 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh03G006630 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7034072.16.0e-1278.95hypothetical protein SDJN02_03799, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of CmaCh03G006630 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G006630.1CmaCh03G006630.1mRNA