CmaCh03G006300 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G006300
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic
Location	Cma_Chr03: 5446790 .. 5447191 (+)
RNA-Seq Expression	CmaCh03G006300
Synteny	CmaCh03G006300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTCTTATGGTAACTGGGTTCATGAATTATGGTCAACAAACAGTACGAGCTGCAAGGTACATTGGTCAGAGTTTCATGATTACTTTATCCCATGCAAATCGTTTGCCTGTAACTATTCAATATCCTTAGGAAAAATTAATCGCATCTGAGTGTTTCTGCGCTCGAATCCATTTTGAATTTGATAAGTGCATTGCTTGTAAAGTATGTGTTCGTGTATGTCCTATAGATCTCCCCGTTGTTGATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAATTACAGTATTGATTTTGGGATCTGTATATTTTGTGATAACTGCATTGAATATTGTCCAACAAATTGTTTATCAATGAAGAATATGAATTTTCTACTTATGATCGTTACGAATTGA

mRNA sequence

ATGTTTCTTATGGTAACTGGGTTCATGAATTATGGTCAACAAACAGTACGAGCTGCAAGGTACATTGGTCAGAGTTTCATGATTACTTTATCCCATGCAAATCGTTTGCCTGAAAAATTAATCGCATCTGAGTGTTTCTGCGCTCGAATCCATTTTGAATTTGATAAGTGCATTGCTTGTAAAGTATGTGTTCGTGTATGTCCTATAGATCTCCCCGTTGTTGATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAATTACAGTATTGATTTTGGGATCTGTATATTTTGTGATAACTGCATTGAATATTGTCCAACAAATTGTTTATCAATGAAGAATATGAATTTTCTACTTATGATCGTTACGAATTGA

Coding sequence (CDS)

ATGTTTCTTATGGTAACTGGGTTCATGAATTATGGTCAACAAACAGTACGAGCTGCAAGGTACATTGGTCAGAGTTTCATGATTACTTTATCCCATGCAAATCGTTTGCCTGAAAAATTAATCGCATCTGAGTGTTTCTGCGCTCGAATCCATTTTGAATTTGATAAGTGCATTGCTTGTAAAGTATGTGTTCGTGTATGTCCTATAGATCTCCCCGTTGTTGATTGGAAATTGGAAACGGATATTCGAAAGAAACGATTGCTTAATTACAGTATTGATTTTGGGATCTGTATATTTTGTGATAACTGCATTGAATATTGTCCAACAAATTGTTTATCAATGAAGAATATGAATTTTCTACTTATGATCGTTACGAATTGA

Protein sequence

MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPEKLIASECFCARIHFEFDKCIACKVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCDNCIEYCPTNCLSMKNMNFLLMIVTN

Homology

[Close]

BLAST of CmaCh03G006300 vs. ExPASy Swiss-Prot
Match: Q09FQ6 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Nandina domestica OX=41776 GN=ndhI PE=3 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 3.6e-56
Identity = 106/121 (87.60%), Postives = 108/121 (89.26%), Query Frame = 0


Query: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP-------EKLIASECFCARIHFE 60
           MF MVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP       EKLI SE F  RIHFE
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  FDKCIACKVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCDNCIEYCPTNCLS 115
           FDKCIAC+VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFC NC+EYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

[Close]

BLAST of CmaCh03G006300 vs. ExPASy Swiss-Prot
Match: Q9BBP0 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Lotus japonicus OX=34305 GN=ndhI PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 7.9e-56
Identity = 106/121 (87.60%), Postives = 108/121 (89.26%), Query Frame = 0


Query: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP-------EKLIASECFCARIHFE 60
           MFLMVTGFMNY QQTVRAARYIGQSFMITLSHANRLP       EKLI SE F  RIHFE
Sbjct: 1   MFLMVTGFMNYSQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  FDKCIACKVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCDNCIEYCPTNCLS 115
           FDKCIAC+VCVRVCPIDLPVVDWKLET+IRKKRLLNYSIDFGICIFC NCIEYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETNIRKKRLLNYSIDFGICIFCGNCIEYCPTNCLS 120

[Close]

BLAST of CmaCh03G006300 vs. ExPASy Swiss-Prot
Match: Q2QD37 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis sativus OX=3659 GN=ndhI PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.0e-55
Identity = 105/121 (86.78%), Postives = 108/121 (89.26%), Query Frame = 0


Query: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP-------EKLIASECFCARIHFE 60
           MF MVTGFMNYGQQTVRAARYIGQ F+ITLSHANRLP       EKLIASE F  RIHFE
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQGFVITLSHANRLPVTIQYPYEKLIASERFRGRIHFE 60

Query: 61  FDKCIACKVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCDNCIEYCPTNCLS 115
           FDKCIAC+VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFC NC+EYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

[Close]

BLAST of CmaCh03G006300 vs. ExPASy Swiss-Prot
Match: Q0ZIW4 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhI PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.0e-55
Identity = 105/121 (86.78%), Postives = 108/121 (89.26%), Query Frame = 0


Query: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP-------EKLIASECFCARIHFE 60
           MF MVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP       EKLI SE F  RIHFE
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  FDKCIACKVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCDNCIEYCPTNCLS 115
           FDKCIAC+VCVRVCPIDLPVVDWKLETDIRKK+LLNYSIDFGICIFC NC+EYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKQLLNYSIDFGICIFCGNCVEYCPTNCLS 120

[Close]

BLAST of CmaCh03G006300 vs. ExPASy Swiss-Prot
Match: A1XG09 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Nuphar advena OX=77108 GN=ndhI PE=3 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 3.9e-55
Identity = 104/121 (85.95%), Postives = 107/121 (88.43%), Query Frame = 0


Query: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP-------EKLIASECFCARIHFE 60
           MF MVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP       EK I SE F  RIHFE
Sbjct: 1   MFPMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKSITSERFRGRIHFE 60

Query: 61  FDKCIACKVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCDNCIEYCPTNCLS 115
           FDKCIAC+VCVRVCPIDLPVVDW+LETDIRKKRLLNYSIDFGICIFC NC+EYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWRLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

[Close]

BLAST of CmaCh03G006300 vs. ExPASy TrEMBL
Match: A0A5Q0UUZ1 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Mimosa tenuiflora OX=138060 GN=ndhI PE=3 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54
Identity = 108/121 (89.26%), Postives = 109/121 (90.08%), Query Frame = 0


Query: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP-------EKLIASECFCARIHFE 60
           MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP       EKLI SE F  RIHFE
Sbjct: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  FDKCIACKVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCDNCIEYCPTNCLS 115
           FDKCIAC+VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFC NCIEYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCIEYCPTNCLS 120

[Close]

BLAST of CmaCh03G006300 vs. ExPASy TrEMBL
Match: A0A6H0EE10 (NADH-quinone oxidoreductase subunit I OS=Senna bicapsularis OX=346951 GN=ndhI PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.0e-54
Identity = 107/121 (88.43%), Postives = 109/121 (90.08%), Query Frame = 0


Query: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP-------EKLIASECFCARIHFE 60
           MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP       EKLI SE F  RIHFE
Sbjct: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  FDKCIACKVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCDNCIEYCPTNCLS 115
           FDKCIAC+VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFC NC+EYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

[Close]

BLAST of CmaCh03G006300 vs. ExPASy TrEMBL
Match: A0A1B2CY76 (NADH-quinone oxidoreductase subunit I OS=Mezoneuron cucullatum OX=1387641 GN=ndhI PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.0e-54
Identity = 107/121 (88.43%), Postives = 109/121 (90.08%), Query Frame = 0


Query: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP-------EKLIASECFCARIHFE 60
           MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP       EKLI SE F  RIHFE
Sbjct: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  FDKCIACKVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCDNCIEYCPTNCLS 115
           FDKCIAC+VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFC NC+EYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

[Close]

BLAST of CmaCh03G006300 vs. ExPASy TrEMBL
Match: A0A0K0LUT6 (NADH-quinone oxidoreductase subunit I OS=Chamaecrista fasciculata OX=53854 GN=ndhI PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.0e-54
Identity = 107/121 (88.43%), Postives = 109/121 (90.08%), Query Frame = 0


Query: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP-------EKLIASECFCARIHFE 60
           MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP       EKLI SE F  RIHFE
Sbjct: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  FDKCIACKVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCDNCIEYCPTNCLS 115
           FDKCIAC+VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFC NC+EYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

[Close]

BLAST of CmaCh03G006300 vs. ExPASy TrEMBL
Match: A0A6G9L4B3 (NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Gleditsia sinensis OX=66096 GN=ndhI PE=3 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.0e-54
Identity = 107/121 (88.43%), Postives = 109/121 (90.08%), Query Frame = 0


Query: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP-------EKLIASECFCARIHFE 60
           MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP       EKLI SE F  RIHFE
Sbjct: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  FDKCIACKVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCDNCIEYCPTNCLS 115
           FDKCIAC+VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFC NC+EYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

[Close]

BLAST of CmaCh03G006300 vs. NCBI nr
Match: QGA85322.1 (NADH-plastoquinone oxidoreductase subunit I [Mimosa tenuiflora])

HSP 1 Score: 221.9 bits (564), Expect = 3.2e-54
Identity = 108/121 (89.26%), Postives = 109/121 (90.08%), Query Frame = 0


Query: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP-------EKLIASECFCARIHFE 60
           MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP       EKLI SE F  RIHFE
Sbjct: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  FDKCIACKVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCDNCIEYCPTNCLS 115
           FDKCIAC+VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFC NCIEYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCIEYCPTNCLS 120

[Close]

BLAST of CmaCh03G006300 vs. NCBI nr
Match: YP_009769312.1 (NdhI [Senna bicapsularis] >YP_010040554.1 NADH-plastoquinone oxidoreductase subunit I [Senna spectabilis] >QGX04739.1 NADH-plastoquinone oxidoreductase subunit I [Senna siamea] >QIT00014.1 NdhI [Senna bicapsularis] >QNH92126.1 NADH dehydrogenase subunit I [Senna bicapsularis] >QOZ39936.1 NADH-plastoquinone oxidoreductase subunit I [Senna spectabilis] >QPO05549.1 NdhI [Senna bicapsularis])

HSP 1 Score: 221.5 bits (563), Expect = 4.2e-54
Identity = 107/121 (88.43%), Postives = 109/121 (90.08%), Query Frame = 0


Query: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP-------EKLIASECFCARIHFE 60
           MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP       EKLI SE F  RIHFE
Sbjct: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  FDKCIACKVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCDNCIEYCPTNCLS 115
           FDKCIAC+VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFC NC+EYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

[Close]

BLAST of CmaCh03G006300 vs. NCBI nr
Match: YP_009764792.1 (NdhI [Acrocarpus fraxinifolius] >QIS95069.1 NdhI [Acrocarpus fraxinifolius])

HSP 1 Score: 221.5 bits (563), Expect = 4.2e-54
Identity = 107/121 (88.43%), Postives = 109/121 (90.08%), Query Frame = 0


Query: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP-------EKLIASECFCARIHFE 60
           MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP       EKLI SE F  RIHFE
Sbjct: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  FDKCIACKVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCDNCIEYCPTNCLS 115
           FDKCIAC+VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFC NC+EYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

[Close]

BLAST of CmaCh03G006300 vs. NCBI nr
Match: YP_009708534.1 (NADH-plastoquinone oxidoreductase subunit I [Ormosia semicastrata] >QEV86143.1 NADH-plastoquinone oxidoreductase subunit I [Ormosia semicastrata])

HSP 1 Score: 221.5 bits (563), Expect = 4.2e-54
Identity = 107/121 (88.43%), Postives = 109/121 (90.08%), Query Frame = 0


Query: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP-------EKLIASECFCARIHFE 60
           MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP       EKLI SE F  RIHFE
Sbjct: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  FDKCIACKVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCDNCIEYCPTNCLS 115
           FDKCIAC+VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFC NC+EYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

[Close]

BLAST of CmaCh03G006300 vs. NCBI nr
Match: QGA85318.1 (NADH-plastoquinone oxidoreductase subunit I, partial [Guilfoylia monostylis])

HSP 1 Score: 221.5 bits (563), Expect = 4.2e-54
Identity = 107/121 (88.43%), Postives = 109/121 (90.08%), Query Frame = 0


Query: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP-------EKLIASECFCARIHFE 60
           MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP       EKLI SE F  RIHFE
Sbjct: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  FDKCIACKVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCDNCIEYCPTNCLS 115
           FDKCIAC+VCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFC NC+EYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

[Close]

BLAST of CmaCh03G006300 vs. TAIR 10
Match: ATCG01090.1 (NADPH dehydrogenases )

HSP 1 Score: 209.9 bits (533), Expect = 1.2e-54
Identity = 100/121 (82.64%), Postives = 105/121 (86.78%), Query Frame = 0


Query: 1   MFLMVTGFMNYGQQTVRAARYIGQSFMITLSHANRLP-------EKLIASECFCARIHFE 60
           M  M+TGFMNYGQQT+RAARYIGQ FMITLSH NRLP       EKLI SE F  RIHFE
Sbjct: 1   MLPMITGFMNYGQQTLRAARYIGQGFMITLSHTNRLPVTIQYPYEKLITSERFRGRIHFE 60

Query: 61  FDKCIACKVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCDNCIEYCPTNCLS 115
           FDKCIAC+VCVRVCPIDLPVVDWKLET+IRKKRLLNYSIDFGICIFC NC+EYCPTNCLS
Sbjct: 61  FDKCIACEVCVRVCPIDLPVVDWKLETNIRKKRLLNYSIDFGICIFCGNCVEYCPTNCLS 120

[Close]

BLAST of CmaCh03G006300 vs. TAIR 10
Match: AT1G16700.1 (Alpha-helical ferredoxin )

HSP 1 Score: 48.9 bits (115), Expect = 3.5e-06
Identity = 21/58 (36.21%), Postives = 32/58 (55.17%), Query Frame = 0


Query: 55  DKCIACKVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCDNCIEYCPTNCL 113
           ++CIACK+C  VCP     ++ + E +   +R   Y ID   CI+C  C E CP + +
Sbjct: 121 ERCIACKLCEAVCPAQAITIEAE-EREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 177

[Close]

BLAST of CmaCh03G006300 vs. TAIR 10
Match: AT1G79010.1 (Alpha-helical ferredoxin )

HSP 1 Score: 48.9 bits (115), Expect = 3.5e-06
Identity = 21/58 (36.21%), Postives = 32/58 (55.17%), Query Frame = 0


Query: 55  DKCIACKVCVRVCPIDLPVVDWKLETDIRKKRLLNYSIDFGICIFCDNCIEYCPTNCL 113
           ++CIACK+C  VCP     ++ + E +   +R   Y ID   CI+C  C E CP + +
Sbjct: 121 ERCIACKLCEAVCPAQAITIEAE-EREDGSRRTTRYDIDMTKCIYCGFCQEACPVDAI 177

The following BLAST results are available for this feature:

BLAST of CmaCh03G006300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q09FQ6	3.6e-56	87.60	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Nandina domestica OX=...	[more]
Q9BBP0	7.9e-56	87.60	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Lotus japonicus OX=34...	[more]
Q2QD37	1.0e-55	86.78	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Cucumis sativus OX=36...	[more]
Q0ZIW4	1.0e-55	86.78	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Vitis vinifera OX=297...	[more]
A1XG09	3.9e-55	85.95	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Nuphar advena OX=7710...	[more]

BLAST of CmaCh03G006300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5Q0UUZ1	1.5e-54	89.26	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Mimosa tenuiflora OX=...	[more]
A0A6H0EE10	2.0e-54	88.43	NADH-quinone oxidoreductase subunit I OS=Senna bicapsularis OX=346951 GN=ndhI PE...	[more]
A0A1B2CY76	2.0e-54	88.43	NADH-quinone oxidoreductase subunit I OS=Mezoneuron cucullatum OX=1387641 GN=ndh...	[more]
A0A0K0LUT6	2.0e-54	88.43	NADH-quinone oxidoreductase subunit I OS=Chamaecrista fasciculata OX=53854 GN=nd...	[more]
A0A6G9L4B3	2.0e-54	88.43	NAD(P)H-quinone oxidoreductase subunit I, chloroplastic OS=Gleditsia sinensis OX...	[more]

BLAST of CmaCh03G006300 vs. NCBI nr


Match Name	E-value	Identity	Description
QGA85322.1	3.2e-54	89.26	NADH-plastoquinone oxidoreductase subunit I [Mimosa tenuiflora]	[more]
YP_009769312.1	4.2e-54	88.43	NdhI [Senna bicapsularis] >YP_010040554.1 NADH-plastoquinone oxidoreductase subu...	[more]
YP_009764792.1	4.2e-54	88.43	NdhI [Acrocarpus fraxinifolius] >QIS95069.1 NdhI [Acrocarpus fraxinifolius]	[more]
YP_009708534.1	4.2e-54	88.43	NADH-plastoquinone oxidoreductase subunit I [Ormosia semicastrata] >QEV86143.1 N...	[more]
QGA85318.1	4.2e-54	88.43	NADH-plastoquinone oxidoreductase subunit I, partial [Guilfoylia monostylis]	[more]

BLAST of CmaCh03G006300 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG01090.1	1.2e-54	82.64	NADPH dehydrogenases	[more]
AT1G16700.1	3.5e-06	36.21	Alpha-helical ferredoxin	[more]
AT1G79010.1	3.5e-06	36.21	Alpha-helical ferredoxin	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.3270		coord: 36..122 e-value: 1.6E-15 score: 59.1
None	No IPR available	PIRSR	PIRSR000068-1	PIRSR000068-1	coord: 48..115 e-value: 1.5E-6 score: 26.4
None	No IPR available	PIRSR	PIRSR006429-1	PIRSR006429-1	coord: 52..119 e-value: 5.2E-4 score: 16.7
None	No IPR available	PIRSR	PIRSR005784-1	PIRSR005784-1	coord: 53..117 e-value: 2.0E-5 score: 22.5
None	No IPR available	PANTHER	PTHR47275:SF1	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT I, CHLOROPLASTIC	coord: 1..115
None	No IPR available	SUPERFAMILY	54862	4Fe-4S ferredoxins	coord: 47..120
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PFAM	PF13187	Fer4_9	coord: 56..111 e-value: 4.2E-8 score: 33.2
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PROSITE	PS51379	4FE4S_FER_2	coord: 88..117 score: 9.34812
IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	PROSITE	PS51379	4FE4S_FER_2	coord: 48..77 score: 9.65895
IPR004497	NADH-plastoquinone oxidoreductase, subunit I	PANTHER	PTHR47275	FAMILY NOT NAMED	coord: 1..115
IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	PROSITE	PS00198	4FE4S_FER_1	coord: 97..108

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G006300.1	CmaCh03G006300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
biological_process	GO:0019684	photosynthesis, light reaction
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0048038	quinone binding