CmaCh03G005660 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAAATTTTTATGAGGACGTGAATGAGAAGCCGTTCAAGAAAAATTCTCAATCTCCGCAGTCCCCACTTCCGCATTAACTCAAGCGGAGAAGACTCGATGGCAATGGGAGATCAGCTATGGCTACTGCATCTGTAAGTCAACAATTAACGAAGTCGATCGCACTCTCTGCAGCCACCTTCAGCGCAACCATTCTCTTGGTTCTATTTCATCGCACCCATCCATCTTCTTCGATAACCCCAGATCCAATGGCGGCTCGAAGCTTCATCCTCTGGCTTCATGGATTGGGAGATTCAGGTCCTGCCAACGAGCCAATCAAGAATCTCTTCACTTCATCTGAGTTCAAACGCACTTCCTGGTCTTTCCCCTCTGCTCCTTCCAACCCCGTCACGTGTAATTGTAAGTTCTCACGATTTAATTTTTAGGGTTTTTTTTCCTCTGTCTGTGAATAGCCGTGTTCTGGATGTTGAATTTGTGTGGGAAATTATGTTTTTCATACTACACAATCTCATGAAACACTATTAAACCTTTAAACTCTAAAATTTAGAAATGAAGATTCGATCAAAACAATTCAACCCGAAGCCATAAACTGACGGAATTCAACAGGAGAGAAAAAATTATGTGTATACCTGAAAGAGAGAACCCATGGATGGGTTGGTTCTGAATCGTGTAAAGAAGAAGACTTAGAGAGAATTTAGTTGGAGAACAAAGTGGTAACATTGTTTGATCGATGACATAAGCAAAAAGGTAAAGAACTTGGTTTGTAACGGATGGATTACATCTCATTTGTAACTTTGTGTGCTCGTATTATATCAAATTTAGGTGAAATTACTTGTGGCGGTTTAATTTAATAAATATATTTTTGGGTTATTGCATGAATTGTCCTCCCCTGTTGAGGGAGTTTAGTTTTGTGGGCTTGATTTGTTTGTATTAATTGACCCAATTTCTTGTTCGAATCAAGGGAATTATATGCTTCGTGTGTTGGATTTGTAATGATGAACTTGAATTGCCCTGTTGGTCTTGAACTGAGGAAGATAGAACTTGTGCTTTAATGCTCTAGAATGGTATCGGACGAAAGTGCGATGCCTGATAGATGATTTGTCAGTCCTTCTCTAGTGAATGGCTTGAACAGCTCAGGGTGATTTTAACCTGGAAACTAAAAGGGAAAGCCAAGAATATGACGGGGCTATGATTGCAACCCCTACTGCCACTTGTTGTCTTCAGCATCTTCTCTTTTAAAAAAGTGTTTTAATCTTCTTATTCTTCAATCAGCTTATTTCTTTTCCACTTGTAGATGGTGCGGTGATGCCTTCATGGTTTGACATTCATGAGATTCCAGTAACCGCTGTAAGTTAAGGCTTTAAGCCATCTTTATATACTCTTTCCTTCCTGAAACGGTCGTCCCATGTGAAGAATTTTCCTTTTGCTGCAAAGATAAATTATTATTTTTGAACTCTTCAATTCTTAAAAAGGTGCTAATACCTCTAAGAAGACGCATCTTTGCTTAAAATTTCTGGATATTAACTCTAAATTCTATCGACAATGGACTATTTGTTGGGTGTTTTATAGCATTTTTCTTTAAAATTTTCCATTCTTTCATGAAATAGGATTCTCCAAAGGCTGAAAGGTCGGTGCTTGAAGCAGTACAGAGTGTGCATGCAAAGATAGACAAGGTGGTAGATGGTGGCATAAGTCCAAATAACATATTTGTGTGTGGATTCAGTCAAGGAGGTTTTAGTCTCTCTCTCCTCCCATCTATACTTGCTTTAGATTTGTATATAAAACTCTTGTATGATAGTTTCTTCTTATTGCTGTTAACTCCTTGCAGGTGCCTTGACATTGGCTAGTGTTCTGCTATATCCAAAGACTCTAGGAGGAGGTGCGGTATTTAGTGGATGGGTTCCTTTCAATTCAACAATTATTGACCGTGTACATCCCGATGCAAAAAGGGTACTCACTCTTTCATTAACAGATCCTTAGTTACAGCTTTGTTGAAAAGTTGGAATTATAATGTGCATTCATGGTGGATGGAGTGGCTGTCATTTTAGATACTTTTGCTGTAAAAAGGGTGAAGGTGTGAGATCACACGTCGGTTGGAGAGGGGAACAAAGCATTTTTGTGTGGAAACCTCTCCCTCACAAACGTATTTTAAAACTTTGAGGGGAAGCCCAGAAGAGAAAGTCCAAAACGACAATATCTGCTAGCGGTAAATTTAGACTATTACAAATGGTATCAGAGCCAGTCACTAGGCAGTGTGCCAGCGTCACTGCTAGCGAGGAGGCTGGGTCTCCAAAGAGGGTGGATTGTGAGATCTCACATCGGTTAGAGAAGGGACGAAGCATTCCTTATAACGGTGTGGAAACCTCTTCCTAACAAACGCATTTTAAAATCTTGAGGGAAAGTCGCTTAAATTTGACAATATATATTAGTGGTGGGCTTAGATTGTTACGGAGACACAATTTCTAAGATTTGAATGTTTGTACAGACACCAATTTTATGGTCTCATGGAATGGACGATAGAACCGTATTGTTTGAAGCTGGACAAGCCGGGCCACCGTTCCTGGAAAAGGCTGGACTAAGCTGCGAATTTAAGGTAATTTGCTTGACTTCCTCTTCTACAAATGTGTATGAACTTTTGAGATTGAAAGTCTAAAATGGTTCGGTCATCTTATTTTGAAGGCGTATCCCGGTCTTGGTCATTCGATAAGCACGGAGGAGCTCAAACACCTTGAATCGTGGATCAAGAGCCGCCTGCAAAGCTCTTCCTGAACCCTTTGAACCCTTTTGCTGGATGACATTCATCATCTTCACATCATTATGTTATTAACAACTTTGACACGCAGTCTAAAAGAAATTTTGTTGGAAAAGCGTGAAGCTGGGTTATAATGTCCAATATTTTGAAGCATTGTAGTTGACTCATAAGGAAGCAAAGAATGATGATTATTCCACATGAGCTAATAATATAATATGCTTTGTTCATCAATTACGTGTTTGGATCTTTAATACGTGGATTACACAAATCATACGTGTCAATGGC TAAAATTTTTATGAGGACGTGAATGAGAAGCCGTTCAAGAAAAATTCTCAATCTCCGCAGTCCCCACTTCCGCATTAACTCAAGCGGAGAAGACTCGATGGCAATGGGAGATCAGCTATGGCTACTGCATCTGTAAGTCAACAATTAACGAAGTCGATCGCACTCTCTGCAGCCACCTTCAGCGCAACCATTCTCTTGGTTCTATTTCATCGCACCCATCCATCTTCTTCGATAACCCCAGATCCAATGGCGGCTCGAAGCTTCATCCTCTGGCTTCATGGATTGGGAGATTCAGGTCCTGCCAACGAGCCAATCAAGAATCTCTTCACTTCATCTGAGTTCAAACGCACTTCCTGGTCTTTCCCCTCTGCTCCTTCCAACCCCGTCACGTGTAATTATGGTGCGGTGATGCCTTCATGGTTTGACATTCATGAGATTCCAGTAACCGCTGATTCTCCAAAGGCTGAAAGGTCGGTGCTTGAAGCAGTACAGAGTGTGCATGCAAAGATAGACAAGGTGGTAGATGGTGGCATAAGTCCAAATAACATATTTGTGTGTGGATTCAGTCAAGGAGGTGCCTTGACATTGGCTAGTGTTCTGCTATATCCAAAGACTCTAGGAGGAGGTGCGGTATTTAGTGGATGGGTTCCTTTCAATTCAACAATTATTGACCGTGTACATCCCGATGCAAAAAGGACACCAATTTTATGGTCTCATGGAATGGACGATAGAACCGTATTGTTTGAAGCTGGACAAGCCGGGCCACCGTTCCTGGAAAAGGCTGGACTAAGCTGCGAATTTAAGGCGTATCCCGGTCTTGGTCATTCGATAAGCACGGAGGAGCTCAAACACCTTGAATCGTGGATCAAGAGCCGCCTGCAAAGCTCTTCCTGAACCCTTTGAACCCTTTTGCTGGATGACATTCATCATCTTCACATCATTATGTTATTAACAACTTTGACACGCAGTCTAAAAGAAATTTTGTTGGAAAAGCGTGAAGCTGGGTTATAATGTCCAATATTTTGAAGCATTGTAGTTGACTCATAAGGAAGCAAAGAATGATGATTATTCCACATGAGCTAATAATATAATATGCTTTGTTCATCAATTACGTGTTTGGATCTTTAATACGTGGATTACACAAATCATACGTGTCAATGGC ATGGCTACTGCATCTGTAAGTCAACAATTAACGAAGTCGATCGCACTCTCTGCAGCCACCTTCAGCGCAACCATTCTCTTGGTTCTATTTCATCGCACCCATCCATCTTCTTCGATAACCCCAGATCCAATGGCGGCTCGAAGCTTCATCCTCTGGCTTCATGGATTGGGAGATTCAGGTCCTGCCAACGAGCCAATCAAGAATCTCTTCACTTCATCTGAGTTCAAACGCACTTCCTGGTCTTTCCCCTCTGCTCCTTCCAACCCCGTCACGTGTAATTATGGTGCGGTGATGCCTTCATGGTTTGACATTCATGAGATTCCAGTAACCGCTGATTCTCCAAAGGCTGAAAGGTCGGTGCTTGAAGCAGTACAGAGTGTGCATGCAAAGATAGACAAGGTGGTAGATGGTGGCATAAGTCCAAATAACATATTTGTGTGTGGATTCAGTCAAGGAGGTGCCTTGACATTGGCTAGTGTTCTGCTATATCCAAAGACTCTAGGAGGAGGTGCGGTATTTAGTGGATGGGTTCCTTTCAATTCAACAATTATTGACCGTGTACATCCCGATGCAAAAAGGACACCAATTTTATGGTCTCATGGAATGGACGATAGAACCGTATTGTTTGAAGCTGGACAAGCCGGGCCACCGTTCCTGGAAAAGGCTGGACTAAGCTGCGAATTTAAGGCGTATCCCGGTCTTGGTCATTCGATAAGCACGGAGGAGCTCAAACACCTTGAATCGTGGATCAAGAGCCGCCTGCAAAGCTCTTCCTGA MATASVSQQLTKSIALSAATFSATILLVLFHRTHPSSSITPDPMAARSFILWLHGLGDSGPANEPIKNLFTSSEFKRTSWSFPSAPSNPVTCNYGAVMPSWFDIHEIPVTADSPKAERSVLEAVQSVHAKIDKVVDGGISPNNIFVCGFSQGGALTLASVLLYPKTLGGGAVFSGWVPFNSTIIDRVHPDAKRTPILWSHGMDDRTVLFEAGQAGPPFLEKAGLSCEFKAYPGLGHSISTEELKHLESWIKSRLQSSS Homology
BLAST of CmaCh03G005660 vs. ExPASy Swiss-Prot
Match: Q8GYK2 (Probable carboxylesterase SOBER1-like OS=Arabidopsis thaliana OX=3702 GN=At4g22300 PE=2 SV=1) HSP 1 Score: 353.6 bits (906), Expect = 1.9e-96 Identity = 165/246 (67.07%), Postives = 202/246 (82.11%), Query Frame = 0
BLAST of CmaCh03G005660 vs. ExPASy Swiss-Prot
Match: Q0J969 (Probable carboxylesterase Os04g0669500 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0669500 PE=3 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 3.2e-96 Identity = 168/261 (64.37%), Postives = 208/261 (79.69%), Query Frame = 0
BLAST of CmaCh03G005660 vs. ExPASy Swiss-Prot
Match: Q84WK4 (Carboxylesterase SOBER1 OS=Arabidopsis thaliana OX=3702 GN=SOBER1 PE=1 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 1.0e-86 Identity = 151/213 (70.89%), Postives = 174/213 (81.69%), Query Frame = 0
BLAST of CmaCh03G005660 vs. ExPASy Swiss-Prot
Match: Q7XR62 (Probable inactive carboxylesterase Os04g0669700 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0669700 PE=3 SV=1) HSP 1 Score: 233.8 bits (595), Expect = 2.2e-60 Identity = 110/210 (52.38%), Postives = 146/210 (69.52%), Query Frame = 0
BLAST of CmaCh03G005660 vs. ExPASy Swiss-Prot
Match: Q0J968 (Probable carboxylesterase Os04g0669600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0669600 PE=2 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 3.9e-57 Identity = 103/210 (49.05%), Postives = 141/210 (67.14%), Query Frame = 0
BLAST of CmaCh03G005660 vs. ExPASy TrEMBL
Match: A0A6J1IJ70 (carboxylesterase SOBER1-like OS=Cucurbita maxima OX=3661 GN=LOC111477921 PE=4 SV=1) HSP 1 Score: 523.9 bits (1348), Expect = 3.9e-145 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
BLAST of CmaCh03G005660 vs. ExPASy TrEMBL
Match: A0A6J1GGK2 (probable carboxylesterase Os04g0669500 OS=Cucurbita moschata OX=3662 GN=LOC111453707 PE=4 SV=1) HSP 1 Score: 514.6 bits (1324), Expect = 2.4e-142 Identity = 252/258 (97.67%), Postives = 255/258 (98.84%), Query Frame = 0
BLAST of CmaCh03G005660 vs. ExPASy TrEMBL
Match: A0A0A0KH84 (Abhydrolase_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G511810 PE=4 SV=1) HSP 1 Score: 481.9 bits (1239), Expect = 1.7e-132 Identity = 235/258 (91.09%), Postives = 242/258 (93.80%), Query Frame = 0
BLAST of CmaCh03G005660 vs. ExPASy TrEMBL
Match: A0A1S3B091 (LOW QUALITY PROTEIN: probable carboxylesterase SOBER1-like OS=Cucumis melo OX=3656 GN=LOC103484650 PE=4 SV=1) HSP 1 Score: 481.5 bits (1238), Expect = 2.2e-132 Identity = 236/258 (91.47%), Postives = 241/258 (93.41%), Query Frame = 0
BLAST of CmaCh03G005660 vs. ExPASy TrEMBL
Match: A0A5D3CRW4 (Putative carboxylesterase SOBER1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006080 PE=4 SV=1) HSP 1 Score: 481.1 bits (1237), Expect = 2.9e-132 Identity = 235/258 (91.09%), Postives = 241/258 (93.41%), Query Frame = 0
BLAST of CmaCh03G005660 vs. NCBI nr
Match: XP_022977687.1 (carboxylesterase SOBER1-like [Cucurbita maxima]) HSP 1 Score: 523.9 bits (1348), Expect = 8.1e-145 Identity = 258/258 (100.00%), Postives = 258/258 (100.00%), Query Frame = 0
BLAST of CmaCh03G005660 vs. NCBI nr
Match: XP_022950684.1 (probable carboxylesterase Os04g0669500 [Cucurbita moschata] >KAG6603810.1 putative carboxylesterase SOBER1-like protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 514.6 bits (1324), Expect = 4.9e-142 Identity = 252/258 (97.67%), Postives = 255/258 (98.84%), Query Frame = 0
BLAST of CmaCh03G005660 vs. NCBI nr
Match: KAG7033991.1 (putative carboxylesterase SOBER1-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 511.1 bits (1315), Expect = 5.4e-141 Identity = 251/258 (97.29%), Postives = 254/258 (98.45%), Query Frame = 0
BLAST of CmaCh03G005660 vs. NCBI nr
Match: XP_023545113.1 (probable carboxylesterase SOBER1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 510.8 bits (1314), Expect = 7.1e-141 Identity = 252/258 (97.67%), Postives = 253/258 (98.06%), Query Frame = 0
BLAST of CmaCh03G005660 vs. NCBI nr
Match: XP_038880927.1 (carboxylesterase SOBER1-like [Benincasa hispida]) HSP 1 Score: 486.9 bits (1252), Expect = 1.1e-133 Identity = 238/258 (92.25%), Postives = 244/258 (94.57%), Query Frame = 0
BLAST of CmaCh03G005660 vs. TAIR 10
Match: AT4G22300.1 (carboxylesterases ) HSP 1 Score: 353.6 bits (906), Expect = 1.3e-97 Identity = 165/246 (67.07%), Postives = 202/246 (82.11%), Query Frame = 0
BLAST of CmaCh03G005660 vs. TAIR 10
Match: AT4G22305.1 (alpha/beta-Hydrolases superfamily protein ) HSP 1 Score: 321.2 bits (822), Expect = 7.4e-88 Identity = 151/213 (70.89%), Postives = 174/213 (81.69%), Query Frame = 0
BLAST of CmaCh03G005660 vs. TAIR 10
Match: AT1G18773.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: carboxylesterases (TAIR:AT4G22300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 62.4 bits (150), Expect = 6.2e-10 Identity = 25/38 (65.79%), Postives = 33/38 (86.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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