CmaCh03G005530 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G005530
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Homeobox protein knotted-1, putative
Location	Cma_Chr03: 5146944 .. 5155083 (-)
RNA-Seq Expression	CmaCh03G005530
Synteny	CmaCh03G005530

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAGGGGCATCGGAATTCCCGATCAGAAGCTCGTCGGACGAGGACCCTGCTGCATATCTTCCATATTTTTGATGTTTCTGGTCCTCACTGCACTTGATCGGTTTGGTTCCGCCTGTCGGCTCTTCCATTTTCGGCTTTTTTCCAGAACCACCAGCTTTAGGGTAGAAAGGGGAGAGTTTTGAAAAGCTAAAAGTGAGGTGCCAACAACCAGTTGTACTTGGATCAGATTCCAACATTTTCCACTAACTCGAGTGATCAAGCGGAGAACCTGTTATTTTTGCGCACCTAATTTATAGTTATTAACAGTCTCTTTCCAGCTTTTGTGAGAGACTTCCCCTCCCGTCAGGAATTTCTTCTTTCCCCCACGGGTGCAAGTTCAACTACCCATCTTCAATTTCTTGCCTGAACTAAAGAAATTCTTAGCAGAGTTTAAGAATTGAATTTCAGCGTCCATCGCTTGTTCATGGTGGGGATTATCTTGCATGAACTAACGAAACAAGAAACGGTGCGAGGGAAAGGGGCTTGAGGAGTTTGAGTCCATTATTCAATCCTCCTGTAGATGAAACATTGCCACCATCCTCGGCTCAGCGTAGGTTGACTGATGCGACATCCATGATAAGACATTTTATTTTGCCACCATCCCCACTACCGCTTTTTCATTAATGTGTCTGTCTGGCCCAGAGGGTGCCTTGAAAATATGAACTGCATTTTGTGGGATTTCTTGTACGTTCAATCTTTCTTCGAAATTCGCCTATTTTATGCAACTTTAAACTCTCCATTTCAATAAAACTTAGTTAGTATTGGTTGGTTTCCTTCCCGTGGTCGCAAAGAGGAAGAACAAGGCTGCTTTGTTGAAAAAAGAACAGATTTTGAGATGTTCATACTCTGATGAGTTGCAAAAACAAAAACTGGGTCGAAGGAATACCGAATACCACACAAAAATTCAATGGTAGTGGCACTAATTAGAGTAGCGTCACTTCGTTGTCGGCCAACAGAACAATTTGTGGTACCATCTTTTATCTCTCTTTCTTTGTTTGGAGGGTTTGGTCGAACAAGGGCCCTCTAATATGCCTGAAGCCATGTGCTTGCCACTCACTTCAGCAATCAATATACCCCTCCAAAATATCCCCTAATAATTTCTGATTTATTCATTTCCTTTTCCTCCGCCCTTTTGATTCACCGTAAGAAACAACACCAACACCATATGGAAACACAGAGGGAGGGAGTCTAATCATGGAGAAAAACCAAATATGCATCCAGTTCTCAAGTGATGACATTCATTAATAAGATGAAGATGATTTGTGTTAATGGAAGATGATGAGACGTGGGGGCTTTGCCTTTTCTGTGGTGCACACAGAGAAGCCCAACTCTTTCATTTGGTTTGTTCTTTTTCCCCCCAAACTTGTCGCCCTTCAAATGCCTCAACTCTCAAGTCTTCGTCCAATTATTTAACCATCATCTTCTTCTACATATGGTATTCTATTGCTTTCCAAAATGCGCGAAACAAAGTTTTAAGTAAAAATTGACATACTATTGTTTTGTATTATTGTGATATTAAATGGTGTGTTATGTTAATGGAATGTATTAACCCATATTACCTCAAAAACTAAAGAGTAAGGAGAAATCGACGGATGAAAAATTATTCTAAAAATCTTTTATGAGCCAATAATACGAACATTAACCAATAGACAAGACAATAATTACCATTGAACTAAAAAATAAATAATAATTCGTTTCGCCTAACTGATCATCCTTTATTTGCAATATGGCACCATTTTTGTATTTGATAATGTCAACTCCTACTGGTAAGTAAATAATTTTCTTATACTTAAGTGTACGGTCAATGGAAATGGGTTGAATCAAGTGGTATAAATAATTAATAATTGACCAAAAATTGGGGCTTGCATTTCCTTAAAAATTAATAATAATAAACTAATAATATCTGGTTTAAGGGAAGGTTAGTGTGCACTCAAATCTTAACTTTAAATATTCACTAAACCATTTGTACCCAAAAGTTGAAACAAATTAAAGTAAGACATACTTTCTGAATATTAGTTATTTGTCCCTATATGCCTAAAACTCTTTTTTATTATTGTTATTATCTTTAATTTTTAACTTTTCACTATTCTATTTTTATTTAAACTATTTCAAAACATATTAAATATTATGTATATGTGTTTGTATATATATGTGTCACTATTTTTTTATGATGGGATAAGAGAGGTGGAAATCTATTGTACTTTAGATGGTTGACCAAGTTACAACGTTTGAGTTGTCTTACTACAACCACGAATACGTTCTAATTGATTGCTCATTATTGTTTAGAAGACAAGTAATAGATAGGAAGGATAGAATTTGAACCCGTAACATTTTGTATCTAAAACAAACGCGCATCAAAGGTGGTTAAATAAGTACTAAAACATGAGTATTTTGTAGCAAATATCTCCAAGTTGAAAAAAGAATCAAATAAATTAAATGAATTTTTTTTTTTGTTGGGTCGGGTTAAATTTTTTTAAGACTTAAAATTTGGATTCAGAGATTTTTTAAGATCATGTTAACCCGATAAATGAAAACCGTTGGGATTAAGCTGTTATGGAGACATCAGTTGTTTACAACAAATCTTTCATTTTTCCGAGGGAGAATCCGAGAGAACCATGTAGCATTTGGTGTGTAAATAGTGATTGTGTTTGGGGTTGGCGGTGGTGGCGGCAATGGCGTTGATTGGAAGAGTTTAGAGCGCATACCACGCCGTCTGCAAGACGAATCATGGGCTTGTACAGGGAAATGACTTAAAGTGCATCACCAACCCAAAGCAAAAAAAGAAAGAAAAAAAACCCTAACGTAGGGTTCCAACCCACTTTCTCTAAACCCTAAATAACCCCAAACCCCTTTCTCCCTGCTCCACATTTCGTGTCGGATTCGCTTACTGTATATATTATTTCTCCCCAAAACCCTAAACCCTAAATAACCCTAATTCCCAACTTCCAGCCCTAAACCCTAAAAAACCCTAATTCCCAAATTCTATCCCTAAACCCTAAAAAACCCTAATTCCAATTTCTTGTATTTGGTGTCTACTTTGTAGGAGATAAGATTGGAGATTGACGATGAAAGACAAAAGGGACTGACGCTGAATCATTTCTTATTTATTTATCTATTTATTTAGGTTTGTAGGGCACATTTTTCATTGTACTTCTTTTGCTTACGTATATTATTCTCCCAACTATCTCTGTCTCCCTCGTAGAAACCAATTTCAAAACTGGGAACTGATTGTTCTTCCTCTCTTCTTACAAATTCCCTTACTTTATTCATTTCCTTCACTAATTTTGTGTAAATGTTTCATTGTTTACAAGAATTACCCTTTTTATGTTTATACTAATCAAATACTTCTAAATTATAATTAACTCCTATAAACATTGTTTACTAAATTATAATTAGATGATTTGACATGTGACGAGGAGGATGAATGGTTTATGAAATATAAAAGAGTCGATACATAGAGTGTTTTGCACCCAACGCTCTCGAGAAACGTTCAAAAGCGTGACTAACATACAAGCTTTTATGCATAGAGTTGGAAATTTCAACGACCATAGAAACATTGTCGTTCGTGAGATGAAAAGTTATCTCGGAAAGGAATTGTGATGCCAATCAAGTTGTCAATAGATCGTTAGATGAGTCGTGTATATGTCATAGAATCATTAGTGGAATTTGAATGATGTTAGTAAATATATGACATTTTATCTAACTTAAATGCTCATCACGCGTTTAAAATAGTTTCTATCGGATAAGTTACGACGCAATTTATAAAATGAGAAGTTATCTTAAGAATGAAGTAGGATTCCAGTCAAATTAAAAAAGAGATTTTTTTATCTCTTTTTTATCGACAAAGCAATGAATGATCGACACGAATGCTCGTTAAAATGAAAATTTGAAAGGAGACAATGGAGCGGAAATGAGTAGACATGATGATAGTTGAAGTTGGGAGCTTGGATGAACATGAGATGTTGAGTAGTTTTGTGTCAAATATTTTCATATGTGCGTGAGAGGAGGAATATGTTTTATTCGATTCATCCTATGTTTGCTTGTTGGTACACATTATATATATATATATATCAATGCCGGAGGGTTAAATTTCACAATCATAACACAAGCACAGCCAAGCCTTTAACTTTAAGGTGGTAATAATTTTGACAATTTATTTGTACCTTTGAGAATGCTTTCCAATTTTGATGAGTTTCCTTTTAATCAATTTTTTTCTTTTTTTGTTTACTTTCGAGTAGTTGAATTGTCCCGTTAAATTATGAATCACCTAAAAATTTGAAGCCTCATTTTTCATCTTTTGTTATTATGTTAAATTACCATTTAATCTAAAAGTTTAGACGTTGAAATATTGATTATAATATTTTTAAACCGTTGATCATCTAAAATTGATTATAATATTTATCTCTAATTGTGTGTTAGCATCCTATTTAAATTGAAATTTAATGGGATACACTTAAAATGATTTTTATTAGAAATTTCAAATATCCGTATTTACGTCATTTCATGGAGCAGTAAGGTTTGACCGTGAAATAATAGAATTGGAAGAATCAATTTAATTGAGGTGATTCATTATCTGTTCATTTTAAAATTGTTAATAAATAAAGAAAAGAGTTGAACATATTATTACAAAATCAGGAATGAAAAGTCTTGGTTGATTATTAAATTAGTTATAATTTAAACCAATATAAAGTTTATAAATTAAAAAAAAAGGGAACAAAAGGTTAGAGCATTTAATGGTCACTGTTTGAGAGAGAGAGAGAGATTAGGAGGTAGAGCTAAGAAGGGTGAAAGATAAGAAGCGACATTTGGAGTGTCCCACCTACTCTATTACCACCTTTATTTTCCCCCCCTTTCTCACTCCCTCCATCCCCCATCGCTGCCTTGGTTTTCCATCTCTCCGCCCTGCTCTGCCCTGCACTGCCCTCTCCTCGATTCCGTCGTTTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTCTTTTTGGCAGTAATGGCAGTGCCTCATCAGTGCCACTGCAACAACAAAAGAGGACGACGAGAGTTTTCATCGGGAAGGTAAAAAAAAAAGACCCAACGAAAAAAAATTGAAGCTTTGCCACTATCCTCTTAACCCATCTCCTTCGCTCTCTCAAAAACTTGAAACAAACGCAACCCACCGAAGAAGAAGAGGAAAAAACACTAAAGGTGGGGACTTTAATCTGTTTGATACATTTAAACCAATACCTCCAACGCCAGGCTTTTCCAGTTTCATTGATGAACAACTCGGATCTTTCTTAAAAGAACCCAAAAGCCTGAACTTTTCGAAGCTAAAATCCCGGGAGTCTAAAAACAAAACTGGGTTTATTAGGAGAGAGACGCACGGATTTTGTTCGTTGTTGTTGTTATCAATGGATGGTCCAAGTGGGAGTTCTTCAGGTGGAGGTATGATGAATTTTGTTGATCAAAACAGTCATAATGGGTTTAGTTCCATGATGATGATGATGCCCTTGATGTCCTCCTCTCATCAACAACAACATCACCAGGGAGATGCATGTAGCTCGTTTCTTCCTCCTCCTCCGCCGCCGCCTAATTACACCAACAATAACACTTCTAATTCAATTTCTTACTTCTTGGGTGAAACCAACAGCAACATCAACATCAACGAGGGTAGTAATGGTAATTCCTGTTGTGAATTGAAGGCCAAAATCATGGGTCATCCCCACTACCATCGCCTCCTTGTTGCCTATGTCAATTGCCGGAAGGTAATAATGATACTAAATGTTATTCTATTTAGGACCCGGGAGCATAGGCTGAGATCTGAAGCTTTTTGGCAGGTGGGGGCGCCGCCGGAAGTGGTGGCGAGGCTTGAACAAGCGTGTGCTTCTGCAGCAACAATGAGTGGTACGTCTTGTATTGGACAAGATCCGGGGCTTGACCAGTTCATGGAGGCTTACTGTGAGATGCTCACCAAATATGAACAAGAACTTTCTAAACCCTTTAGGGATGCCATGCTTTTTCTTCAACGAATTGAGTGCCAATTCAAAGCTCTCTCTATCTCCTCCTCCTCCGATGCTGGTGATTTCTTACTAACAATTACCCTTTTTTATTTAATCATCTTTTTTTTTTCTTAGGTTCTGCATTTCACGTTGCTTGGTTTATAATTAGTTTATTCTCACTGTCTTTTTTTTTTTTTTTCCCTTTCCATTTGCCCAATTTTTCTGCTTTTTTTCATTATAATATTTTATTATTTTTGGGCACTTTCTTTGTGGCTAGGGCATCTATGAATCCTTTGATTTGCATAGTCTCTAGTTTGAAGATATATTGTTCTTAGGGTTTATATCTAAACCTCGTCGGTCAAAGAAGGCTTCACAGATGAGTTTTAAAAGGTGGTTATAGATATTGTCTTCTTTAGATTTTTTCTTTTAGACTTCTGCTCAAGGTTTTGAATCGCATTTGCTAGGAATAGGTTTTCACACTTTTATAAGGAAGGTTAGAATCGATGTGGAATTTGACACAAATGATTTTGAAAACTAAATTAATAAGAACATATTTGAAAGGAAATTCAATATTTTCAACCAAAAAGAAATGAAGTTTGTAGAAATGCATGAATCTATGTGTGTAAGGTTGGTTGAGATCTTCTATTACATGCCATTGGGAAGTTGAGATGAAACTTATGAATTCATCGTCTTTAATACCCCATATCTTCAATACATTTTCATATAGTTCATCTTTTTCTTCCTTCAAATGGGATGCTCTCAGTATTGTTTTCATAATCGAAGTGAGAATCCCGATGTTCGAGTTTCGAATGAAACATTTAACCTCTCTTGTTTTTGTGTCGATTTAAATATCTAAGATATCTGTCTCTTAATGATCATTGATCATGATTTCAATAATTTGCATGCGGTGATTCTATTTCTACGTACAATGATGATGATGAACTGTTTGTCACATTGTAGCGGTCTCATCGAACAATTTATCCTGTCATTGGTTTTTGAGTTTGCATTGATGAACATGTGTCATTAAGTTGCTTTGGAAATACCGGATCATTTTTTTTTTCTTCTACTACTTTTATTGCACAAATCCTTGAAAAGCTGCCAAAAAGAAAGAAAAAAAGTCTTATTTCAGCGTAATGTTTCAACTCTTGCCCGCCCTTTGTCTTACTGGGTTAGGAACCACGAGTCTCCACAATGGTATGATATTGTCCACGTTGAGCATTAACTCGAGTGACTTTGTTTTTAGTTTTTCAAAAAGGCTCATACAAATGGAAATGTATTCCTTACTCCCTTGCAACAATCCGAAACTATAAATACTTGATTCATTTTTATCACGTAAAGTTATTGTAGAATTAGTATAATGTGTGGCTCCATGTTGTAATGTTTTGTTGTTCGCTTGACACATTTTTTGCACACGCCACTTAGGTTGCGGTGAGGCATTTGATAGGAACGGATCATCTGAAGAGGAAGTTGATATGAATGGGCAGTCGATTGACCCCTGGGCGGAAGACCATGAACTGAAAGGTCAACTCCTCCGAAAATACAGCAGATACTTGGGCAGTCTGAAGCAAGAATTCATGAAGAAACGGAAGAAAGGGAAGCTACCAAAGGAGGCCAGGCAACAGCTCCTGGATTGGTGGAGCAGACATTACAAATGGCCTTATCCATCCGTATGTTCTGGTTTTGATAACATACACTATATAGATTATACATATAATATTCTAGATTATATAGATTCACAAATGGGATTGGAATGCTGTTTGTCACAGGAATCACAGAAGGTAGCTTTAGCTGAATCAACTGGGTTAGACCAAAAGCAAATCAACAACTGGTTCATCAACCAGAGAAAAAGACACTGGAAGCCATCTGAAGACATGCAGTTTGTGGTGATGGATGCTGCTCATCATCATCCTCAGTATTACATGGACTCCGTCTTGGGGAATCCTTTTCCATTTGATATCTCTCCCACTCTTCTCTAATTATTAAATTTCCTTTTTATATAATGTCATGTATATGTATATGATGATGATGATGGTGTTGATGGCGATCGCCTGTATGGATGTATGATGGATGTTTCAATTTGTTTGACAGAACATATATATATCACTTTGCCATTTGTTGGTTA

mRNA sequence

ATGTGGAGGGGCATCGGAATTCCCGATCAGAAGCTCGTCGGACGAGGACCCTGCTGCATATCTTCCATATTTTTGATGTTTCTGGTCCTCACTGCACTTGATCGGTTTGGTTCCGCCTGTCGGCTCTTCCATTTTCGGCTTTTTTCCAGAACCACCAGCTTTAGGAGTTTAAGAATTGAATTTCAGCGTCCATCGCTTGTTCATGATGAAACATTGCCACCATCCTCGGCTCAGCGTAGAGGGTGCCTTGAAAATATGAACTGCATTTTGTGGGATTTCTTAACAATTTGTGGTACCATCTTTTATCTCTCTTTCTTTGTTTGGAGGGTTTGGTCGAACAAGGGCCCTCTAATATGCCTGAAGCCATATGATGAGACGTGGGGGCTTTGCCTTTTCTGTGGTGCACACAGAGAAGCCCAACTCTTTCATTTGGGAAGAGTTGGAAATTTCAACGACCATAGAAACATTGTCGTTCGTGAGATGAAAATAATGGCAGTGCCTCATCAGTGCCACTGCAACAACAAAAGAGGACGACGAGAGTTTTCATCGGGAAGGAGAGAGACGCACGGATTTTGTTCGTTGTTGTTGTTATCAATGGATGGTCCAAGTGGGAGTTCTTCAGGTGGAGGTATGATGAATTTTGTTGATCAAAACAGTCATAATGGGTTTAGTTCCATGATGATGATGATGCCCTTGATGTCCTCCTCTCATCAACAACAACATCACCAGGGAGATGCATGTAGCTCGTTTCTTCCTCCTCCTCCGCCGCCGCCTAATTACACCAACAATAACACTTCTAATTCAATTTCTTACTTCTTGGGTGAAACCAACAGCAACATCAACATCAACGAGGGTAGTAATGGTAATTCCTGTTGTGAATTGAAGGCCAAAATCATGGGTCATCCCCACTACCATCGCCTCCTTGTTGCCTATGTCAATTGCCGGAAGGTGGGGGCGCCGCCGGAAGTGGTGGCGAGGCTTGAACAAGCGTGTGCTTCTGCAGCAACAATGAGTGGTACGTCTTGTATTGGACAAGATCCGGGGCTTGACCAGTTCATGGAGGCTTACTGTGAGATGCTCACCAAATATGAACAAGAACTTTCTAAACCCTTTAGGGATGCCATGCTTTTTCTTCAACGAATTGAGTGCCAATTCAAAGCTCTCTCTATCTCCTCCTCCTCCGATGCTGGTTGCGGTGAGGCATTTGATAGGAACGGATCATCTGAAGAGGAAGTTGATATGAATGGGCAGTCGATTGACCCCTGGGCGGAAGACCATGAACTGAAAGGTCAACTCCTCCGAAAATACAGCAGATACTTGGGCAGTCTGAAGCAAGAATTCATGAAGAAACGGAAGAAAGGGAAGCTACCAAAGGAGGCCAGGCAACAGCTCCTGGATTGGTGGAGCAGACATTACAAATGGCCTTATCCATCCGAATCACAGAAGGTAGCTTTAGCTGAATCAACTGGGTTAGACCAAAAGCAAATCAACAACTGGTTCATCAACCAGAGAAAAAGACACTGGAAGCCATCTGAAGACATGCAGTTTGTGGTGATGGATGCTGCTCATCATCATCCTCAGTATTACATGGACTCCGTCTTGGGGAATCCTTTTCCATTTGATATCTCTCCCACTCTTCTCTAATTATTAAATTTCCTTTTTATATAATGTCATGTATATGTATATGATGATGATGATGGTGTTGATGGCGATCGCCTGTATGGATGTATGATGGATGTTTCAATTTGTTTGACAGAACATATATATATCACTTTGCCATTTGTTGGTTA

Coding sequence (CDS)

ATGTGGAGGGGCATCGGAATTCCCGATCAGAAGCTCGTCGGACGAGGACCCTGCTGCATATCTTCCATATTTTTGATGTTTCTGGTCCTCACTGCACTTGATCGGTTTGGTTCCGCCTGTCGGCTCTTCCATTTTCGGCTTTTTTCCAGAACCACCAGCTTTAGGAGTTTAAGAATTGAATTTCAGCGTCCATCGCTTGTTCATGATGAAACATTGCCACCATCCTCGGCTCAGCGTAGAGGGTGCCTTGAAAATATGAACTGCATTTTGTGGGATTTCTTAACAATTTGTGGTACCATCTTTTATCTCTCTTTCTTTGTTTGGAGGGTTTGGTCGAACAAGGGCCCTCTAATATGCCTGAAGCCATATGATGAGACGTGGGGGCTTTGCCTTTTCTGTGGTGCACACAGAGAAGCCCAACTCTTTCATTTGGGAAGAGTTGGAAATTTCAACGACCATAGAAACATTGTCGTTCGTGAGATGAAAATAATGGCAGTGCCTCATCAGTGCCACTGCAACAACAAAAGAGGACGACGAGAGTTTTCATCGGGAAGGAGAGAGACGCACGGATTTTGTTCGTTGTTGTTGTTATCAATGGATGGTCCAAGTGGGAGTTCTTCAGGTGGAGGTATGATGAATTTTGTTGATCAAAACAGTCATAATGGGTTTAGTTCCATGATGATGATGATGCCCTTGATGTCCTCCTCTCATCAACAACAACATCACCAGGGAGATGCATGTAGCTCGTTTCTTCCTCCTCCTCCGCCGCCGCCTAATTACACCAACAATAACACTTCTAATTCAATTTCTTACTTCTTGGGTGAAACCAACAGCAACATCAACATCAACGAGGGTAGTAATGGTAATTCCTGTTGTGAATTGAAGGCCAAAATCATGGGTCATCCCCACTACCATCGCCTCCTTGTTGCCTATGTCAATTGCCGGAAGGTGGGGGCGCCGCCGGAAGTGGTGGCGAGGCTTGAACAAGCGTGTGCTTCTGCAGCAACAATGAGTGGTACGTCTTGTATTGGACAAGATCCGGGGCTTGACCAGTTCATGGAGGCTTACTGTGAGATGCTCACCAAATATGAACAAGAACTTTCTAAACCCTTTAGGGATGCCATGCTTTTTCTTCAACGAATTGAGTGCCAATTCAAAGCTCTCTCTATCTCCTCCTCCTCCGATGCTGGTTGCGGTGAGGCATTTGATAGGAACGGATCATCTGAAGAGGAAGTTGATATGAATGGGCAGTCGATTGACCCCTGGGCGGAAGACCATGAACTGAAAGGTCAACTCCTCCGAAAATACAGCAGATACTTGGGCAGTCTGAAGCAAGAATTCATGAAGAAACGGAAGAAAGGGAAGCTACCAAAGGAGGCCAGGCAACAGCTCCTGGATTGGTGGAGCAGACATTACAAATGGCCTTATCCATCCGAATCACAGAAGGTAGCTTTAGCTGAATCAACTGGGTTAGACCAAAAGCAAATCAACAACTGGTTCATCAACCAGAGAAAAAGACACTGGAAGCCATCTGAAGACATGCAGTTTGTGGTGATGGATGCTGCTCATCATCATCCTCAGTATTACATGGACTCCGTCTTGGGGAATCCTTTTCCATTTGATATCTCTCCCACTCTTCTCTAA

Protein sequence

MWRGIGIPDQKLVGRGPCCISSIFLMFLVLTALDRFGSACRLFHFRLFSRTTSFRSLRIEFQRPSLVHDETLPPSSAQRRGCLENMNCILWDFLTICGTIFYLSFFVWRVWSNKGPLICLKPYDETWGLCLFCGAHREAQLFHLGRVGNFNDHRNIVVREMKIMAVPHQCHCNNKRGRREFSSGRRETHGFCSLLLLSMDGPSGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSSHQQQHHQGDACSSFLPPPPPPPNYTNNNTSNSISYFLGETNSNININEGSNGNSCCELKAKIMGHPHYHRLLVAYVNCRKVGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL

Homology

[Close]

BLAST of CmaCh03G005530 vs. ExPASy Swiss-Prot
Match: Q38874 (Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 SV=2)

HSP 1 Score: 437.6 bits (1124), Expect = 2.1e-121
Identity = 251/381 (65.88%), Postives = 279/381 (73.23%), Query Frame = 0


Query: 203 SGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSS---------HQQQHHQGDA------- 262
           SGS+S    M F   NS      MMMMMP + +S         HQQQ H G A       
Sbjct: 3   SGSNSTSCPMAFAGDNSDGPMCPMMMMMPPIMTSHQHHGHDHQHQQQEHDGYAYQSHHQQ 62

Query: 263 CSSFLPPPPPPPNYTNNNTSNSIS-------YFLGETNSNI----NINEGSNGNSCCELK 322
            SS       PP  T N  ++S S       Y L E + N      IN  S+ +S   +K
Sbjct: 63  SSSLFLQSLAPPQGTKNKVASSSSPSSCAPAYSLMEIHHNEIVAGGINPCSSSSSSASVK 122

Query: 323 AKIMGHPHYHRLLVAYVNCRKVGAPPEVVARLEQAC----ASAATMSGTSCIGQDPGLDQ 382
           AKIM HPHYHRLL AYVNC+KVGAPPEVVARLE+AC    A+AA+M  T C+G+DPGLDQ
Sbjct: 123 AKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLGEDPGLDQ 182

Query: 383 FMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISS-SSDAGCGE-AFDR--NGS 442
           FMEAYCEML KYEQELSKPF++AM+FLQR+ECQFK+LS+SS SS +G GE A DR  NGS
Sbjct: 183 FMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGETAIDRNNNGS 242

Query: 443 SEEEVDMNGQSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDW 502
           SEEEVDMN + +DP AED ELKGQLLRKYS YLGSLKQEFMKKRKKGKLPKEARQQLLDW
Sbjct: 243 SEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDW 302

Query: 503 WSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQ 548
           WSRHYKWPYPSE QK+ALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDA H H  
Sbjct: 303 WSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPH-H 362

[Close]

BLAST of CmaCh03G005530 vs. ExPASy Swiss-Prot
Match: O22299 (Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum OX=4081 GN=LET6 PE=2 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.2e-119
Identity = 222/306 (72.55%), Postives = 253/306 (82.68%), Query Frame = 0


Query: 254 PPPPPNYTNNN---TSNSISYFLGETNSNININ-EGSNGNSCCELKAKIMGHPHYHRLLV 313
           PPPPP+ TNNN   TSN+   FL   ++N N N +  N +S   +K+KIM HPHYHRLL 
Sbjct: 52  PPPPPSLTNNNNAETSNNNILFLPFMDNNNNNNPQEDNNSSSSSIKSKIMAHPHYHRLLT 111

Query: 314 AYVNCRKVGAPPEVVARLEQACASAATM------SGTSCIGQDPGLDQFMEAYCEMLTKY 373
           AY+NC+K+GAPPEVVARLE+ CA++ATM      SG   IG+DP LDQFMEAYCEMLTKY
Sbjct: 112 AYLNCQKIGAPPEVVARLEEICATSATMGRSSSSSGGGIIGEDPALDQFMEAYCEMLTKY 171

Query: 374 EQELSKPFRDAMLFLQRIECQFKALSI--SSSSDAGCGEAFDRNGSSEEEVDMNGQSIDP 433
           EQELSKPF++AM+FL RIECQFKAL++  +SS ++  GEA DRNGSS+EEVD+N   IDP
Sbjct: 172 EQELSKPFKEAMVFLSRIECQFKALTLAPNSSHESALGEAMDRNGSSDEEVDVNNSFIDP 231

Query: 434 WAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQ 493
            AED ELKGQLLRKYS YLGSLKQEFMKKRKKGKLPKEARQQL+DWW RH KWPYPSESQ
Sbjct: 232 QAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPSESQ 291

Query: 494 KVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFD 548
           K+ALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAA  HP YYMD+VL N FP D
Sbjct: 292 KLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAA--HPHYYMDNVLANHFPMD 351

[Close]

BLAST of CmaCh03G005530 vs. ExPASy Swiss-Prot
Match: P46608 (Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 1.4e-117
Identity = 239/384 (62.24%), Postives = 276/384 (71.88%), Query Frame = 0


Query: 199 MDGPSGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSSHQQQHHQGDA------------ 258
           M+G S SS+G   +    +N+  G    M MMPL++S H   H    +            
Sbjct: 1   MEGGSSSSNGTSYLLAFGENNSGGLCP-MTMMPLVTSHHAGHHPINPSNNNNVNTNCLFI 60

Query: 259 --CSSFLPPPP--PPPNYTN-------NNTSNSISYFLGET------NSNININEGSNGN 318
             CS+    P      N+ N       NN +  + Y+  E+      + N N N  S+ +
Sbjct: 61  PNCSNSTGTPSIMLHNNHNNNKTDDDDNNNNTGLGYYFMESDHHHHHHGNNNNNGSSSSS 120

Query: 319 SCCELKAKIMGHPHYHRLLVAYVNCRKVGAPPEVVARLEQACASAATM------SGTSCI 378
           S   +KAKIM HPHYHRLL AYVNC+KVGAPPEVVARLE+ACASAATM      +G+SCI
Sbjct: 121 SSSAVKAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGDAAAGSSCI 180

Query: 379 GQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDAGCGEAFD 438
           G+DP LDQFMEAYCEMLTKYEQELSKP ++AMLFLQRIECQFK L+I SSSD    E  D
Sbjct: 181 GEDPALDQFMEAYCEMLTKYEQELSKPLKEAMLFLQRIECQFKNLTI-SSSDFASNEGGD 240

Query: 439 RNGSSEEEVDMNGQSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQ 498
           RNGSSEE+VD++   IDP AED +LKGQLLRKYS YLGSLKQEFMKKRKKGKLPKEARQQ
Sbjct: 241 RNGSSEEDVDLHNM-IDPQAEDRDLKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQ 300

Query: 499 LLDWWSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAH 548
           LL+WW+RHYKWPYPSESQK+ALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMD + 
Sbjct: 301 LLEWWNRHYKWPYPSESQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDPS- 360

[Close]

BLAST of CmaCh03G005530 vs. ExPASy Swiss-Prot
Match: Q9M6D9 (Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea OX=3712 GN=STM PE=2 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 4.3e-114
Identity = 239/382 (62.57%), Postives = 265/382 (69.37%), Query Frame = 0


Query: 203 SGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSSHQQQH-----------HQGDACSS-- 262
           SGS+S    M F   NS      MMMMM  + +SHQQ H           H G A  S  
Sbjct: 3   SGSNSTSCPMAFAGDNSDGPMCPMMMMMMPVITSHQQHHGHDQQHQHQQQHDGYAYQSHH 62

Query: 263 ------FLPPPPPPPNYTNNNTSNSIS-------YFLGETNSNININEG---SNGNSCCE 322
                 FL    PP     N   +S S       Y   E N    +  G   S   S   
Sbjct: 63  QHSSLLFLQSLTPPSQEAKNKVRSSCSPSSGAPAYSFMEINHQNELLAGGLQSPVLSSLL 122

Query: 323 LKAKIMGHPHYHRLLVAYVNCRKVGAPPEVVARLEQAC----ASAATMSGTSCIGQDPGL 382
           +KAKIM HPHYHRLL+AYVNC+KVGAPPEV ARLE+ C    A+AA+M  T  +G+DPGL
Sbjct: 123 VKAKIMAHPHYHRLLLAYVNCQKVGAPPEVQARLEETCSSAAAAAASMGPTGSLGEDPGL 182

Query: 383 DQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDAGCGEAF---DRNG 442
           DQFMEAYCEML KYEQELSKPF++AM+FLQ +ECQFK+LS+SS S  G GEA    + NG
Sbjct: 183 DQFMEAYCEMLVKYEQELSKPFKEAMVFLQHVECQFKSLSLSSPSSLGYGEAAIERNNNG 242

Query: 443 SSEEEVDMNGQSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLD 502
           SSEEEVDMN + +DP AED ELKGQLLRKYS YLGSLKQEFMKKRKKGKLPKEARQQLLD
Sbjct: 243 SSEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLD 302

Query: 503 WWSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHP 548
           WWSRHYKWPYPSE QK+ALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDA  H  
Sbjct: 303 WWSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAT-HPL 362

[Close]

BLAST of CmaCh03G005530 vs. ExPASy Swiss-Prot
Match: P46639 (Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana OX=3702 GN=KNAT1 PE=1 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 3.7e-73
Identity = 170/361 (47.09%), Postives = 214/361 (59.28%), Query Frame = 0


Query: 203 SGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSSHQQQHHQGDACSSFLPPPPPPPNYTN 262
           + SS+ G   N  + N+H+      M+ P MSS   Q            P     P+  +
Sbjct: 41  NNSSNYGPGYNNTNNNNHH---HQHMLFPHMSSLLPQTTENCFRSDHDQPNNNNNPSVKS 100

Query: 263 NNTSNSISYFLGETNSNININEGSNGNS-----CCELKAKIMGHPHYHRLLVAYVNCRKV 322
             +S+ I+++     +  N  E +N N+        +KAKI+ HPHY  LL AY++C+K+
Sbjct: 101 EASSSRINHYSMLMRAIHNTQEANNNNNDNVSDVEAMKAKIIAHPHYSTLLQAYLDCQKI 160

Query: 323 GAPPEVVARLEQA-----CASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFR 382
           GAPP+VV R+  A          +    S   +DP LDQFMEAYC+ML KY +EL++P +
Sbjct: 161 GAPPDVVDRITAARQDFEARQQRSTPSVSASSRDPELDQFMEAYCDMLVKYREELTRPIQ 220

Query: 383 DAMLFLQRIECQFKALSISSSSDAGCGEA-FDRNGSSEEEVDMNG------QSIDPWAED 442
           +AM F++RIE Q   L  S        +   D  GSS+EE + N         IDP AED
Sbjct: 221 EAMEFIRRIESQLSMLCQSPIHILNNPDGKSDNMGSSDEEQENNSGGETELPEIDPRAED 280

Query: 443 HELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVAL 502
            ELK  LL+KYS YL SLKQE  KK+KKGKLPKEARQ+LL WW  HYKWPYPSES+KVAL
Sbjct: 281 RELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVAL 340

Query: 503 AESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAH--HHPQYYMDSVLGNPFPFDIS 545
           AESTGLDQKQINNWFINQRKRHWKPSEDMQF+VMD     HH   YMD       P+ + 
Sbjct: 341 AESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLQHPHHAALYMDGHYMGDGPYRLG 398

[Close]

BLAST of CmaCh03G005530 vs. ExPASy TrEMBL
Match: A0A6J1IPU1 (homeobox protein SHOOT MERISTEMLESS-like OS=Cucurbita maxima OX=3661 GN=LOC111478842 PE=3 SV=1)

HSP 1 Score: 713.8 bits (1841), Expect = 5.6e-202
Identity = 349/349 (100.00%), Postives = 349/349 (100.00%), Query Frame = 0


Query: 199 MDGPSGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSSHQQQHHQGDACSSFLPPPPPPP 258
           MDGPSGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSSHQQQHHQGDACSSFLPPPPPPP
Sbjct: 1   MDGPSGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSSHQQQHHQGDACSSFLPPPPPPP 60

Query: 259 NYTNNNTSNSISYFLGETNSNININEGSNGNSCCELKAKIMGHPHYHRLLVAYVNCRKVG 318
           NYTNNNTSNSISYFLGETNSNININEGSNGNSCCELKAKIMGHPHYHRLLVAYVNCRKVG
Sbjct: 61  NYTNNNTSNSISYFLGETNSNININEGSNGNSCCELKAKIMGHPHYHRLLVAYVNCRKVG 120

Query: 319 APPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFL 378
           APPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFL
Sbjct: 121 APPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFL 180

Query: 379 QRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSIDPWAEDHELKGQLLRKYSR 438
           QRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSIDPWAEDHELKGQLLRKYSR
Sbjct: 181 QRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSIDPWAEDHELKGQLLRKYSR 240

Query: 439 YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINN 498
           YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINN
Sbjct: 241 YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINN 300

Query: 499 WFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 548
           WFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL
Sbjct: 301 WFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 349

[Close]

BLAST of CmaCh03G005530 vs. ExPASy TrEMBL
Match: A0A6J1GDG8 (homeobox protein SHOOT MERISTEMLESS-like OS=Cucurbita moschata OX=3662 GN=LOC111453189 PE=3 SV=1)

HSP 1 Score: 687.2 bits (1772), Expect = 5.7e-194
Identity = 341/351 (97.15%), Postives = 343/351 (97.72%), Query Frame = 0


Query: 199 MDGPSGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSSHQQQHHQGDACSSFL--PPPPP 258
           MDGPSGSSSGGGMMNFVDQNSHNGF SMMMMMPLMS+SHQQQHHQGDACSSFL  PPPPP
Sbjct: 1   MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQQHHQGDACSSFLPPPPPPP 60

Query: 259 PPNYTNNNTSNSISYFLGETNSNININEGSNGNSCCELKAKIMGHPHYHRLLVAYVNCRK 318
           PPNYTNNNTSNSISYFL ETN+  NINEGSNGNS CELKAKIMGHPHYHRLLVAYVNCRK
Sbjct: 61  PPNYTNNNTSNSISYFLDETNN--NINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRK 120

Query: 319 VGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAML 378
           VGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAML
Sbjct: 121 VGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAML 180

Query: 379 FLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSIDPWAEDHELKGQLLRKY 438
           FLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMN QSIDPWAEDHELKGQLLRKY
Sbjct: 181 FLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRKY 240

Query: 439 SRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQI 498
           SRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQI
Sbjct: 241 SRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQI 300

Query: 499 NNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 548
           NNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL
Sbjct: 301 NNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 349

[Close]

BLAST of CmaCh03G005530 vs. ExPASy TrEMBL
Match: A0A6J1BTA7 (homeobox protein SBH1 OS=Momordica charantia OX=3673 GN=LOC111005360 PE=3 SV=1)

HSP 1 Score: 553.5 bits (1425), Expect = 9.8e-154
Identity = 297/363 (81.82%), Postives = 314/363 (86.50%), Query Frame = 0


Query: 199 MDGPS-GSSSGGGMMNFVDQNSHNGF-SSMMMMMPLMSSSHQQQHHQGD-ACSSF--LPP 258
           M+GPS G  S  GMMNF DQN++NG  SSMMMMMPLMSS      H GD ACSSF  LPP
Sbjct: 1   MEGPSGGGGSSSGMMNFGDQNNNNGLCSSMMMMMPLMSS------HGGDGACSSFLPLPP 60

Query: 259 PPPPPNY---TNNNTSNSISYFLGETNSNINI-NEGSN----GNSCCELKAKIMGHPHYH 318
           PPPP NY    NNNT+N ISYF+   N+N N  NEG+N     +S  ++KAKIM HPHYH
Sbjct: 61  PPPPHNYEPSPNNNTTNPISYFMENNNTNNNSNNEGANNAASSSSSSQVKAKIMAHPHYH 120

Query: 319 RLLVAYVNCRKVGAPPEVVARLEQACASAATMSGT-SCIGQDPGLDQFMEAYCEMLTKYE 378
           RLL AYVNCRKVGAPPEVVARLEQACASAAT+SGT SCIG+DP LDQFMEAYCEMLTKYE
Sbjct: 121 RLLAAYVNCRKVGAPPEVVARLEQACASAATISGTSSCIGEDPALDQFMEAYCEMLTKYE 180

Query: 379 QELSKPFRDAMLFLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSIDPWAE 438
           QELSKPFRDAMLFLQRI+CQFKALSISSSSDA CGEAFDRNGSSEEEVD+NG SIDP AE
Sbjct: 181 QELSKPFRDAMLFLQRIDCQFKALSISSSSDAACGEAFDRNGSSEEEVDINGHSIDPQAE 240

Query: 439 DHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVA 498
           D ELKGQLLRKYS YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQK+A
Sbjct: 241 DRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLA 300

Query: 499 LAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISP 548
           LA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAA  HPQYYMD+VLGNPFP DISP
Sbjct: 301 LAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAA--HPQYYMDTVLGNPFPLDISP 355

[Close]

BLAST of CmaCh03G005530 vs. ExPASy TrEMBL
Match: A0A1S3B0X4 (homeobox protein knotted-1-like LET6 OS=Cucumis melo OX=3656 GN=LOC103484637 PE=3 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 1.1e-149
Identity = 287/361 (79.50%), Postives = 307/361 (85.04%), Query Frame = 0


Query: 199 MDGPSGSSSGGGMMNFVDQ-----NSHNGFSSMMMMMPLMSSSHQQQHHQGDACSSFLPP 258
           MDGPSG+ S GGMMNF DQ     N++NG  SMMMMMPL+S+S  QQ   G +C+ FLP 
Sbjct: 1   MDGPSGNCS-GGMMNFGDQNNNNNNNNNGLCSMMMMMPLISAS--QQGGDGSSCTPFLPL 60

Query: 259 PPPPPNYTNNNTSNSISYFLGETNSNININ-EGSNG-NSCCELKAKIMGHPHYHRLLVAY 318
           PPP  N TNNN ++  +YF+ ETN+N N N E SNG NSCCE+KAKIM HPHYHRLL AY
Sbjct: 61  PPPNYNNTNNNNNSICNYFMDETNNNNNNNSESSNGANSCCEVKAKIMAHPHYHRLLTAY 120

Query: 319 VNCRKVGAPPEVVARLEQACASAATMS----GTSCIGQDPGLDQFMEAYCEMLTKYEQEL 378
           VNCRKVGAPPEVVARLE+ACASA TMS    G  CIG+DP LDQFMEAYCEMLTKYEQEL
Sbjct: 121 VNCRKVGAPPEVVARLEEACASAVTMSSGNNGGGCIGEDPALDQFMEAYCEMLTKYEQEL 180

Query: 379 SKPFRDAMLFLQRIECQFKALSISSSS-DAGCGEAFDRNGSSEEEVDMNGQSIDPWAEDH 438
           SKPFRDAMLFLQRI+ QFKALSISSS     CGEAFDRNGSSEEEVD+NG SIDP AED 
Sbjct: 181 SKPFRDAMLFLQRIDSQFKALSISSSHLPPACGEAFDRNGSSEEEVDINGHSIDPQAEDR 240

Query: 439 ELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALA 498
           ELKGQLLRKYS YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQK+ALA
Sbjct: 241 ELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKLALA 300

Query: 499 ESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTL 548
           +STGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAA  HPQYYMD+VLGNPFP DISP L
Sbjct: 301 QSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAA--HPQYYMDAVLGNPFPLDISPAL 356

[Close]

BLAST of CmaCh03G005530 vs. ExPASy TrEMBL
Match: A0A6J1EG52 (homeobox protein knotted-1-like LET6 OS=Cucurbita moschata OX=3662 GN=LOC111433869 PE=3 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 1.9e-149
Identity = 293/368 (79.62%), Postives = 306/368 (83.15%), Query Frame = 0


Query: 199 MDGPSGSSSGGGMMNFVDQ-NSHNGF-SSMMMMMPLMSSSHQQQHHQGDACSSFLPPPPP 258
           MDGP GSSS  GMMNF DQ NS+NG  SSMMMMMPLMSS H   HHQGDAC+ F  PP P
Sbjct: 1   MDGPGGSSS--GMMNFGDQNNSNNGLCSSMMMMMPLMSSHHHHHHHQGDACNPF--PPLP 60

Query: 259 PPNYTNNN--------TSNSISYFLGE-----TNSNININEGSNGN-SCCELKAKIMGHP 318
            PNYT NN        +SN I YF+ E     T +N N N   N N S CELKAKIMGHP
Sbjct: 61  SPNYTTNNINNTNTSSSSNPICYFMDEHTTTTTTNNNNDNGCCNANSSSCELKAKIMGHP 120

Query: 319 HYHRLLVAYVNCRKVGAPPEVVARLEQACASAATMSGTS---CIGQDPGLDQFMEAYCEM 378
           HYHRLL AYVNCRKVGAPP+VVARLE ACASA T+SGTS   CIG+DP LDQFMEAYCEM
Sbjct: 121 HYHRLLAAYVNCRKVGAPPDVVARLEGACASALTISGTSCTGCIGEDPALDQFMEAYCEM 180

Query: 379 LTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSI 438
           LTKYEQELSKPFRDAMLFL RIECQFKALSI SSSDA CGEAF+RNGSSEEEVD+NG SI
Sbjct: 181 LTKYEQELSKPFRDAMLFLHRIECQFKALSI-SSSDAVCGEAFERNGSSEEEVDINGHSI 240

Query: 439 DPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSE 498
           DP AED ELKGQLLRKYS  LGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSE
Sbjct: 241 DPQAEDRELKGQLLRKYSGCLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSE 300

Query: 499 SQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFP 548
           SQK+ALA+STGLDQKQINNWFINQRKRHWKPSEDMQFVVMD    HPQYYMD+VLGNPFP
Sbjct: 301 SQKLALAQSTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDGG--HPQYYMDTVLGNPFP 360

[Close]

BLAST of CmaCh03G005530 vs. NCBI nr
Match: XP_022979101.1 (homeobox protein SHOOT MERISTEMLESS-like [Cucurbita maxima])

HSP 1 Score: 713.8 bits (1841), Expect = 1.2e-201
Identity = 349/349 (100.00%), Postives = 349/349 (100.00%), Query Frame = 0


Query: 199 MDGPSGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSSHQQQHHQGDACSSFLPPPPPPP 258
           MDGPSGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSSHQQQHHQGDACSSFLPPPPPPP
Sbjct: 1   MDGPSGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSSHQQQHHQGDACSSFLPPPPPPP 60

Query: 259 NYTNNNTSNSISYFLGETNSNININEGSNGNSCCELKAKIMGHPHYHRLLVAYVNCRKVG 318
           NYTNNNTSNSISYFLGETNSNININEGSNGNSCCELKAKIMGHPHYHRLLVAYVNCRKVG
Sbjct: 61  NYTNNNTSNSISYFLGETNSNININEGSNGNSCCELKAKIMGHPHYHRLLVAYVNCRKVG 120

Query: 319 APPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFL 378
           APPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFL
Sbjct: 121 APPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFL 180

Query: 379 QRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSIDPWAEDHELKGQLLRKYSR 438
           QRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSIDPWAEDHELKGQLLRKYSR
Sbjct: 181 QRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSIDPWAEDHELKGQLLRKYSR 240

Query: 439 YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINN 498
           YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINN
Sbjct: 241 YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINN 300

Query: 499 WFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 548
           WFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL
Sbjct: 301 WFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 349

[Close]

BLAST of CmaCh03G005530 vs. NCBI nr
Match: XP_022949951.1 (homeobox protein SHOOT MERISTEMLESS-like [Cucurbita moschata])

HSP 1 Score: 687.2 bits (1772), Expect = 1.2e-193
Identity = 341/351 (97.15%), Postives = 343/351 (97.72%), Query Frame = 0


Query: 199 MDGPSGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSSHQQQHHQGDACSSFL--PPPPP 258
           MDGPSGSSSGGGMMNFVDQNSHNGF SMMMMMPLMS+SHQQQHHQGDACSSFL  PPPPP
Sbjct: 1   MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQQHHQGDACSSFLPPPPPPP 60

Query: 259 PPNYTNNNTSNSISYFLGETNSNININEGSNGNSCCELKAKIMGHPHYHRLLVAYVNCRK 318
           PPNYTNNNTSNSISYFL ETN+  NINEGSNGNS CELKAKIMGHPHYHRLLVAYVNCRK
Sbjct: 61  PPNYTNNNTSNSISYFLDETNN--NINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCRK 120

Query: 319 VGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAML 378
           VGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAML
Sbjct: 121 VGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAML 180

Query: 379 FLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSIDPWAEDHELKGQLLRKY 438
           FLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMN QSIDPWAEDHELKGQLLRKY
Sbjct: 181 FLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRKY 240

Query: 439 SRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQI 498
           SRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQI
Sbjct: 241 SRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQI 300

Query: 499 NNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 548
           NNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL
Sbjct: 301 NNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 349

[Close]

BLAST of CmaCh03G005530 vs. NCBI nr
Match: KAG6603798.1 (Homeobox protein SBH1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 683.7 bits (1763), Expect = 1.3e-192
Identity = 341/352 (96.88%), Postives = 343/352 (97.44%), Query Frame = 0


Query: 199 MDGPSGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSSHQQ-QHHQGDACSSFL--PPPP 258
           MDGPSGSSSGGGMMNFVDQNSHNGF SMMMMMPLMS+SHQQ  HHQGDACSSFL  PPPP
Sbjct: 1   MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQHHHHQGDACSSFLPPPPPP 60

Query: 259 PPPNYTNNNTSNSISYFLGETNSNININEGSNGNSCCELKAKIMGHPHYHRLLVAYVNCR 318
           PPPNYTNNNTSNSISYFL ETN+  NINEGSNGNS CELKAKIMGHPHYHRLLVAYVNCR
Sbjct: 61  PPPNYTNNNTSNSISYFLDETNN--NINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNCR 120

Query: 319 KVGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAM 378
           KVGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAM
Sbjct: 121 KVGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAM 180

Query: 379 LFLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSIDPWAEDHELKGQLLRK 438
           LFLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSIDPWAEDHELKGQLLRK
Sbjct: 181 LFLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSIDPWAEDHELKGQLLRK 240

Query: 439 YSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQ 498
           YSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQ
Sbjct: 241 YSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQ 300

Query: 499 INNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 548
           INNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL
Sbjct: 301 INNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 350

[Close]

BLAST of CmaCh03G005530 vs. NCBI nr
Match: XP_023544876.1 (homeobox protein SHOOT MERISTEMLESS-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 677.2 bits (1746), Expect = 1.2e-190
Identity = 338/354 (95.48%), Postives = 341/354 (96.33%), Query Frame = 0


Query: 199 MDGPSGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSSHQQQ-HHQGDACSSFL----PP 258
           MDGPSGSSSGGGMMNFVDQNSHN F SMMMMMPLMS+SHQQQ HHQGDACSSFL    PP
Sbjct: 1   MDGPSGSSSGGGMMNFVDQNSHNAFGSMMMMMPLMSTSHQQQHHHQGDACSSFLPPPPPP 60

Query: 259 PPPPPNYTNNNTSNSISYFLGETNSNININEGSNGNSCCELKAKIMGHPHYHRLLVAYVN 318
           PPPPPNYTNNNTSNSISYFL ETN+  NINEGSNGNS CELKAKIMGHPHYHRLLVAYVN
Sbjct: 61  PPPPPNYTNNNTSNSISYFLDETNN--NINEGSNGNSSCELKAKIMGHPHYHRLLVAYVN 120

Query: 319 CRKVGAPPEVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRD 378
           CRKVGAPP+VVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYE ELSKPFRD
Sbjct: 121 CRKVGAPPDVVARLEQACASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEHELSKPFRD 180

Query: 379 AMLFLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSIDPWAEDHELKGQLL 438
           AMLFLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVD NGQSIDPWAEDHELKGQLL
Sbjct: 181 AMLFLQRIECQFKALSISSSSDAGCGEAFDRNGSSEEEVDKNGQSIDPWAEDHELKGQLL 240

Query: 439 RKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQ 498
           RKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQ
Sbjct: 241 RKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQ 300

Query: 499 KQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 548
           KQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL
Sbjct: 301 KQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQYYMDSVLGNPFPFDISPTLL 352

[Close]

BLAST of CmaCh03G005530 vs. NCBI nr
Match: KAG7033969.1 (Homeobox protein SBH1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 654.4 bits (1687), Expect = 8.4e-184
Identity = 339/390 (86.92%), Postives = 341/390 (87.44%), Query Frame = 0


Query: 199 MDGPSGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSSHQQQ--HHQGDACSSFL--PPP 258
           MDGPSGSSSGGGMMNFVDQNSHNGF SMMMMMPLMS+SHQQQ  HHQGDACSSFL  PPP
Sbjct: 1   MDGPSGSSSGGGMMNFVDQNSHNGFGSMMMMMPLMSTSHQQQHHHHQGDACSSFLPPPPP 60

Query: 259 PPPPNYTNNNTSNSISYFLGETNSNININEGSNGNSCCELKAKIMGHPHYHRLLVAYVNC 318
           PPPPNYTNNNTSNSISYFL ETN+  NINEGSNGNS CELKAKIMGHPHYHRLLVAYVNC
Sbjct: 61  PPPPNYTNNNTSNSISYFLDETNN--NINEGSNGNSSCELKAKIMGHPHYHRLLVAYVNC 120

Query: 319 RK------------------------VGAPPEVVARLEQACASAATMSGTSCIGQDPGLD 378
           RK                        VGAPPEVVARLEQACASAATMSGTSCIGQDPGLD
Sbjct: 121 RKVIIIVNGILFGTRERRLRSEAFWQVGAPPEVVARLEQACASAATMSGTSCIGQDPGLD 180

Query: 379 QFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDAGC------------ 438
           QFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDA C            
Sbjct: 181 QFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDADCHSLCKIVVFLRI 240

Query: 439 -GEAFDRNGSSEEEVDMNGQSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLP 498
             EAFDRNGSSEEEVDMN QSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLP
Sbjct: 241 DSEAFDRNGSSEEEVDMNRQSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLP 300

Query: 499 KEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFV 548
           KEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFV
Sbjct: 301 KEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFV 360

[Close]

BLAST of CmaCh03G005530 vs. TAIR 10
Match: AT1G62360.1 (KNOX/ELK homeobox transcription factor )

HSP 1 Score: 437.6 bits (1124), Expect = 1.5e-122
Identity = 251/381 (65.88%), Postives = 279/381 (73.23%), Query Frame = 0


Query: 203 SGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSS---------HQQQHHQGDA------- 262
           SGS+S    M F   NS      MMMMMP + +S         HQQQ H G A       
Sbjct: 3   SGSNSTSCPMAFAGDNSDGPMCPMMMMMPPIMTSHQHHGHDHQHQQQEHDGYAYQSHHQQ 62

Query: 263 CSSFLPPPPPPPNYTNNNTSNSIS-------YFLGETNSNI----NINEGSNGNSCCELK 322
            SS       PP  T N  ++S S       Y L E + N      IN  S+ +S   +K
Sbjct: 63  SSSLFLQSLAPPQGTKNKVASSSSPSSCAPAYSLMEIHHNEIVAGGINPCSSSSSSASVK 122

Query: 323 AKIMGHPHYHRLLVAYVNCRKVGAPPEVVARLEQAC----ASAATMSGTSCIGQDPGLDQ 382
           AKIM HPHYHRLL AYVNC+KVGAPPEVVARLE+AC    A+AA+M  T C+G+DPGLDQ
Sbjct: 123 AKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACSSAAAAAASMGPTGCLGEDPGLDQ 182

Query: 383 FMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISS-SSDAGCGE-AFDR--NGS 442
           FMEAYCEML KYEQELSKPF++AM+FLQR+ECQFK+LS+SS SS +G GE A DR  NGS
Sbjct: 183 FMEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPSSFSGYGETAIDRNNNGS 242

Query: 443 SEEEVDMNGQSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDW 502
           SEEEVDMN + +DP AED ELKGQLLRKYS YLGSLKQEFMKKRKKGKLPKEARQQLLDW
Sbjct: 243 SEEEVDMNNEFVDPQAEDRELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDW 302

Query: 503 WSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAHHHPQ 548
           WSRHYKWPYPSE QK+ALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDA H H  
Sbjct: 303 WSRHYKWPYPSEQQKLALAESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDATHPH-H 362

[Close]

BLAST of CmaCh03G005530 vs. TAIR 10
Match: AT4G08150.1 (KNOTTED-like from Arabidopsis thaliana )

HSP 1 Score: 277.3 bits (708), Expect = 2.6e-74
Identity = 170/361 (47.09%), Postives = 214/361 (59.28%), Query Frame = 0


Query: 203 SGSSSGGGMMNFVDQNSHNGFSSMMMMMPLMSSSHQQQHHQGDACSSFLPPPPPPPNYTN 262
           + SS+ G   N  + N+H+      M+ P MSS   Q            P     P+  +
Sbjct: 41  NNSSNYGPGYNNTNNNNHH---HQHMLFPHMSSLLPQTTENCFRSDHDQPNNNNNPSVKS 100

Query: 263 NNTSNSISYFLGETNSNININEGSNGNS-----CCELKAKIMGHPHYHRLLVAYVNCRKV 322
             +S+ I+++     +  N  E +N N+        +KAKI+ HPHY  LL AY++C+K+
Sbjct: 101 EASSSRINHYSMLMRAIHNTQEANNNNNDNVSDVEAMKAKIIAHPHYSTLLQAYLDCQKI 160

Query: 323 GAPPEVVARLEQA-----CASAATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFR 382
           GAPP+VV R+  A          +    S   +DP LDQFMEAYC+ML KY +EL++P +
Sbjct: 161 GAPPDVVDRITAARQDFEARQQRSTPSVSASSRDPELDQFMEAYCDMLVKYREELTRPIQ 220

Query: 383 DAMLFLQRIECQFKALSISSSSDAGCGEA-FDRNGSSEEEVDMNG------QSIDPWAED 442
           +AM F++RIE Q   L  S        +   D  GSS+EE + N         IDP AED
Sbjct: 221 EAMEFIRRIESQLSMLCQSPIHILNNPDGKSDNMGSSDEEQENNSGGETELPEIDPRAED 280

Query: 443 HELKGQLLRKYSRYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVAL 502
            ELK  LL+KYS YL SLKQE  KK+KKGKLPKEARQ+LL WW  HYKWPYPSES+KVAL
Sbjct: 281 RELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSESEKVAL 340

Query: 503 AESTGLDQKQINNWFINQRKRHWKPSEDMQFVVMDAAH--HHPQYYMDSVLGNPFPFDIS 545
           AESTGLDQKQINNWFINQRKRHWKPSEDMQF+VMD     HH   YMD       P+ + 
Sbjct: 341 AESTGLDQKQINNWFINQRKRHWKPSEDMQFMVMDGLQHPHHAALYMDGHYMGDGPYRLG 398

[Close]

BLAST of CmaCh03G005530 vs. TAIR 10
Match: AT1G23380.1 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 232.6 bits (592), Expect = 7.3e-61
Identity = 143/320 (44.69%), Postives = 189/320 (59.06%), Query Frame = 0


Query: 210 GMMNFVDQNSHNGFSSMMMMMPLMSSSHQQQHHQGDACSSFLPPPPPPPNYTNNNTSNSI 269
           GM NF     ++   S++MM P   S      +Q   CSS           ++   S ++
Sbjct: 3   GMYNFHSAGDYSD-KSVLMMSP--ESLMFPSDYQALLCSSAGENRVSDVFGSDELLSVAV 62

Query: 270 SYFLGETNSNI-NINEGSNGNSCCELKAKIMGHPHYHRLLVAYVNCRKVGAPPEVVARLE 329
           S    E  S    I    +  S   +KAKI  HP Y RLL AY++C+KVGAPPE+   LE
Sbjct: 63  SALSSEAASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKVGAPPEIACLLE 122

Query: 330 QACASA----ATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQ 389
           +    +      +  +SC G DP LD+FME YC++L KY+ +L++PF +A  FL +IE Q
Sbjct: 123 EIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIEMQ 182

Query: 390 FKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSI----DPWAEDHELKGQLLRKYSRYL 449
            + L     S  G  E  D   SS+EE+      +        ED +LK +LLRK+   +
Sbjct: 183 LRNLCTGVESARGVSE--DGVISSDEELSGGDHEVAEDGRQRCEDRDLKDRLLRKFGSRI 242

Query: 450 GSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINNWF 509
            +LK EF KK+KKGKLP+EARQ LLDWW+ HYKWPYP+E  K+ALA++TGLDQKQINNWF
Sbjct: 243 STLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINNWF 302

Query: 510 INQRKRHWKPSEDMQFVVMD 521
           INQRKRHWKPSE+M F +MD
Sbjct: 303 INQRKRHWKPSENMPFAMMD 317

[Close]

BLAST of CmaCh03G005530 vs. TAIR 10
Match: AT1G70510.1 (KNOTTED-like from Arabidopsis thaliana 2 )

HSP 1 Score: 232.3 bits (591), Expect = 9.6e-61
Identity = 121/247 (48.99%), Postives = 161/247 (65.18%), Query Frame = 0


Query: 282 INEGSNGNSCCELKAKIMGHPHYHRLLVAYVNCRKVGAPPEVVARLEQACAS----AATM 341
           I +  +  S   +K+KI  HP Y RLL  Y++C+KVGAP E+   LE+           +
Sbjct: 57  IRKAEDNFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPMEIACILEEIQRENHVYKRDV 116

Query: 342 SGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIECQFKALSISSSSDAG 401
           +  SC G DP LD+FME YC++L KY+ +L++PF +A  F+ +IE Q + L    +S   
Sbjct: 117 APLSCFGADPELDEFMETYCDILVKYKTDLARPFDEATTFINKIEMQLQNLCTGPASATA 176

Query: 402 CGEAFDRNGSSEEEV----DMNGQSIDPWAEDHELKGQLLRKYSRYLGSLKQEFMKKRKK 461
             +  D   SS+EE+    D+        + D +LK QLLRK+  ++ SLK EF KK+KK
Sbjct: 177 LSD--DGAVSSDEELREDDDIAADDSQQRSNDRDLKDQLLRKFGSHISSLKLEFSKKKKK 236

Query: 462 GKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINNWFINQRKRHWKPSED 521
           GKLP+EARQ LLDWW+ H KWPYP+E  K++LAE TGLDQKQINNWFINQRKRHWKPSE+
Sbjct: 237 GKLPREARQALLDWWNVHNKWPYPTEGDKISLAEETGLDQKQINNWFINQRKRHWKPSEN 296

[Close]

BLAST of CmaCh03G005530 vs. TAIR 10
Match: AT1G23380.2 (KNOTTED1-like homeobox gene 6 )

HSP 1 Score: 227.6 bits (579), Expect = 2.4e-59
Identity = 143/322 (44.41%), Postives = 189/322 (58.70%), Query Frame = 0


Query: 210 GMMNFVDQNSHNGFSSMMMMMPLMSSSHQQQHHQGDACSSFLPPPPPPPNYTNNNTSNSI 269
           GM NF     ++   S++MM P   S      +Q   CSS           ++   S ++
Sbjct: 3   GMYNFHSAGDYSD-KSVLMMSP--ESLMFPSDYQALLCSSAGENRVSDVFGSDELLSVAV 62

Query: 270 SYFLGETNSNI-NINEGSNGNSCCELKAKIMGHPHYHRLLVAYVNCRK--VGAPPEVVAR 329
           S    E  S    I    +  S   +KAKI  HP Y RLL AY++C+K  VGAPPE+   
Sbjct: 63  SALSSEAASIAPEIRRNDDNVSLTVIKAKIACHPSYPRLLQAYIDCQKKQVGAPPEIACL 122

Query: 330 LEQACASA----ATMSGTSCIGQDPGLDQFMEAYCEMLTKYEQELSKPFRDAMLFLQRIE 389
           LE+    +      +  +SC G DP LD+FME YC++L KY+ +L++PF +A  FL +IE
Sbjct: 123 LEEIQRESDVYKQEVVPSSCFGADPELDEFMETYCDILVKYKSDLARPFDEATCFLNKIE 182

Query: 390 CQFKALSISSSSDAGCGEAFDRNGSSEEEVDMNGQSI----DPWAEDHELKGQLLRKYSR 449
            Q + L     S  G  E  D   SS+EE+      +        ED +LK +LLRK+  
Sbjct: 183 MQLRNLCTGVESARGVSE--DGVISSDEELSGGDHEVAEDGRQRCEDRDLKDRLLRKFGS 242

Query: 450 YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSESQKVALAESTGLDQKQINN 509
            + +LK EF KK+KKGKLP+EARQ LLDWW+ HYKWPYP+E  K+ALA++TGLDQKQINN
Sbjct: 243 RISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPTEGDKIALADATGLDQKQINN 302

Query: 510 WFINQRKRHWKPSEDMQFVVMD 521
           WFINQRKRHWKPSE+M F +MD
Sbjct: 303 WFINQRKRHWKPSENMPFAMMD 319

The following BLAST results are available for this feature:

BLAST of CmaCh03G005530 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38874	2.1e-121	65.88	Homeobox protein SHOOT MERISTEMLESS OS=Arabidopsis thaliana OX=3702 GN=STM PE=1 ...	[more]
O22299	1.2e-119	72.55	Homeobox protein knotted-1-like LET6 OS=Solanum lycopersicum OX=4081 GN=LET6 PE=...	[more]
P46608	1.4e-117	62.24	Homeobox protein SBH1 OS=Glycine max OX=3847 GN=H1 PE=2 SV=1	[more]
Q9M6D9	4.3e-114	62.57	Homeobox protein SHOOT MERISTEMLESS OS=Brassica oleracea OX=3712 GN=STM PE=2 SV=...	[more]
P46639	3.7e-73	47.09	Homeobox protein knotted-1-like 1 OS=Arabidopsis thaliana OX=3702 GN=KNAT1 PE=1 ...	[more]

BLAST of CmaCh03G005530 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IPU1	5.6e-202	100.00	homeobox protein SHOOT MERISTEMLESS-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A6J1GDG8	5.7e-194	97.15	homeobox protein SHOOT MERISTEMLESS-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A6J1BTA7	9.8e-154	81.82	homeobox protein SBH1 OS=Momordica charantia OX=3673 GN=LOC111005360 PE=3 SV=1	[more]
A0A1S3B0X4	1.1e-149	79.50	homeobox protein knotted-1-like LET6 OS=Cucumis melo OX=3656 GN=LOC103484637 PE=...	[more]
A0A6J1EG52	1.9e-149	79.62	homeobox protein knotted-1-like LET6 OS=Cucurbita moschata OX=3662 GN=LOC1114338...	[more]

BLAST of CmaCh03G005530 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022979101.1	1.2e-201	100.00	homeobox protein SHOOT MERISTEMLESS-like [Cucurbita maxima]	[more]
XP_022949951.1	1.2e-193	97.15	homeobox protein SHOOT MERISTEMLESS-like [Cucurbita moschata]	[more]
KAG6603798.1	1.3e-192	96.88	Homeobox protein SBH1, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023544876.1	1.2e-190	95.48	homeobox protein SHOOT MERISTEMLESS-like [Cucurbita pepo subsp. pepo]	[more]
KAG7033969.1	8.4e-184	86.92	Homeobox protein SBH1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CmaCh03G005530 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G62360.1	1.5e-122	65.88	KNOX/ELK homeobox transcription factor	[more]
AT4G08150.1	2.6e-74	47.09	KNOTTED-like from Arabidopsis thaliana	[more]
AT1G23380.1	7.3e-61	44.69	KNOTTED1-like homeobox gene 6	[more]
AT1G70510.1	9.6e-61	48.99	KNOTTED-like from Arabidopsis thaliana 2	[more]
AT1G23380.2	2.4e-59	44.41	KNOTTED1-like homeobox gene 6	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005540	KNOX1	SMART	SM01255	KNOX1_2	coord: 292..336 e-value: 1.9E-17 score: 74.0
IPR005540	KNOX1	PFAM	PF03790	KNOX1	coord: 294..332 e-value: 2.3E-19 score: 68.8
IPR005541	KNOX2	SMART	SM01256	KNOX2_2	coord: 339..390 e-value: 2.1E-24 score: 97.0
IPR005541	KNOX2	PFAM	PF03791	KNOX2	coord: 343..388 e-value: 3.5E-20 score: 71.3
IPR005539	ELK domain	SMART	SM01188	ELK_2	coord: 427..448 e-value: 2.0E-7 score: 40.7
IPR005539	ELK domain	PFAM	PF03789	ELK	coord: 427..448 e-value: 7.5E-8 score: 32.3
IPR005539	ELK domain	PROSITE	PS51213	ELK	coord: 427..447 score: 10.73736
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 449..514 e-value: 4.4E-13 score: 59.5
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 447..510 score: 12.989054
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 459..511 e-value: 5.32847E-12 score: 58.7941
IPR008422	Homeobox KN domain	PFAM	PF05920	Homeobox_KN	coord: 467..506 e-value: 5.2E-17 score: 61.5
None	No IPR available	GENE3D	1.10.10.60		coord: 452..514 e-value: 8.6E-27 score: 94.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 234..264
None	No IPR available	PANTHER	PTHR11850	HOMEOBOX PROTEIN TRANSCRIPTION FACTORS	coord: 201..536
None	No IPR available	PANTHER	PTHR11850:SF297	SUBFAMILY NOT NAMED	coord: 201..536
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 485..508
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 449..524

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G005530.1	CmaCh03G005530.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048440	carpel development
biological_process	GO:0010582	floral meristem determinacy
biological_process	GO:0009934	regulation of meristem structural organization
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005768	endosome
cellular_component	GO:0015630	microtubule cytoskeleton
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009506	plasmodesma
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding