CmaCh03G005400 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G005400
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Autophagy-related protein
Location	Cma_Chr03: 5070785 .. 5073459 (+)
RNA-Seq Expression	CmaCh03G005400
Synteny	CmaCh03G005400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAGAAGCTCGTTCAAACTTGGAATTCCTTTGGGTAATCATTTAATTTTACTCTCTCAAAAGCTTCATGTTCATATCCGCATGTATTTGGGCTTAATTCGCGTATTTCTATTGGAATTAGATCAGTTGAATTGATTAGAGGTTGATTGATTTTGTGACTTCGTCGGCCACCTTATTCAAATTCAAGTGCTATTTGGTAGTCGAAGTATCTTCGTGTTGTGTTTGTGGGCACCGAATAGGCGAATATCTGTTTGGTTTCATGATTGTTTCCACTATTTTCACCCCTTTTGGGTAATGCAGTCAGAATTATGCGGTAATTTCATGTTTCAACTATTATTGCTTACCCTGTTGGGGTCTTCACGTCTCAGAAAAGAGACGGGCTGAAGCTGCTCGAGTAAGAGAAAAGTACCCGGATAGAATACCTGTAAGAATAATGTTACGAATTATGTTCTTTACTTCGTATGCTTTCTTAAATTTACTTTGGGTTTGATACTGATTCAAATAAGTTAAACAGGTGATTGTCGAGAAAGCTGGGAGGAGTAACATTGTTGACATTCATAGGAACAAGTATTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTTTGTGAATCGGTGAACTAGCATGAATAGATGATAAGATGTTACAACATTCTTAAAGTAGATACTAGCACATATGTTAGTAGCAGCTGCAGTAATATGTTGAATGAAAATAATGGAGTTGCTAGAATGTAGTTTAAAAGTATCCAAGTCAATCATAAGAATTATGGTTTACTTGAAAGATCTTAATGGCTTTCAGTTGATACATGGAAAAGATGCAATAGAGTTAGTCCCAATAAAGGCAGTCCCCTGATTAGTGCTTTATAATTCTGGATTAATCTCGAACATGAAGTATTGTTTCGTTATAAGCACTTGGACGATCCATTTTGGAAGGGGCCAATCTTGTATAATCGAACAGTTCTATTCATTCAGTTTAGAATTTTTATCTTACCCATTGCAGATACCTCGTCCCTGATGATTTAAATGTTGGACAGTTTGTTTACGTTGTTCGGAAACGGATTAAGCTTAGTGCTGAGAGAGCTATATTTGTATTTGTGAAGGACACTCTACCTTCAACTGGTGAGTGATGATCCTTTTTTCTCTCAGTATCTGATCTCATATCGAATGTGGGCATTGTAATAAATTCTTCTGTACAACAGGTGCTTTGATGTCTGCAATTTATGAGCATTATAAGGATGAAGATGGGTTTCTTTACATGTCATACAGTGGAGAAAACACTTTTGGTGGGTTCCTTGGAGGACAATGATACATTTACATGTAAGTTCCAGCTATGTCCCTTCCGATCAATCAATGCATCAGCTTTCTTTAGCCTTTTTTCCTTCTTTCGTGAACCAATGAAATATAGCTATTGGTGTCTTTTTAGTTGCATATCGAGCAGTGAAATGAGTCTAATATGACATGATGAAATTATATCACTATAGACACACGCCTGAAACTACTACTACTTGATCTGATATCTATAGAATACTGAATATCTCAGCCGAAACAAGTCTTAGAACTCTTTAACATACCATGTTTGCCAATATGCAAACACAAATACCAGAATCATGAAAAGTTTCAATCTTTTGCTGATGAGAGTAGATTTCTCTCTCCCTCTCTGTTATTTTGGTGCCAGGGATGTTGTGACAAATCTACCTAATTTACTTGGAGCTTTTCTTGCGAGGGTTAATGATCCACTTGATGCCGTTAGATATTCCACTTCCTATCTTTTTGGCACCAGCCACGGTCGCCGCCATGGCTTTTGCTATTCCAGCCTTAGAACCAGCCTTCTTGTCCGAGCCCTGGCCCCCTTTGGCTTTACTGCCGTCGTCTTCTTCCATGGCGCCTATGCCTCCAGCTCCCCATTGGTCTGCCCAGCTTGGTGCTTCTGCAGCCATGGTTTCTAATTCCAACCAATACAACATCAAATTCACTGTCTATCCATTATTGGTGTTGAAAGTAACAGCAACCAAATTTATGCCTAAAAAAACTAATTCATGTTCGGATGACCATTGAATTTACCCAGATTAGTAAAGCGAACAGAAAGTTACAACTTTCTCGCTGTCATATTGTCTAAACCATTTCTAAGACGATATAAACGAAACCTCAGAGAGAGATCTGATCTAAAGATTTTATTCATAAGAAAGAGCTTATCTTGAACTTCAAGAAGCACAAACAAAGTGTGGAATTCGAGGTGCAAGAAGCAACGAGATACAGTTAAGAGTCATACCTGGGGATCCAAACCGATGAAGAACTACAGAAACTTAGTGAAGGAATTCGAGGAAGATTAGAAAATAATTGGCAGAAACTCCTTTAGGAAGCAGCAGCAGCAGAACGCAGGGCCATAGGTGGATGGGCTGTCTTTTACTCCCACTGCAATATTACTTTTTTAAAGAGCTTGCCAACTCCTGGTTTCCATCTAACGAAGCAAACTATGTCTTTTGGGCATCTTTTTCTTTCTAATAAAATATATATATATACACATCTTTAATCCTCCTCGTAATCACAAGGCATCTTATTCTCACAAGGCCCGTAAACCTGGACCAGATGTCTACTGATATAACCACCTGGGTTCAAACTCAAACTTCTAATCAAATCCATCAATTATTCAAGAATCACATGTATTCCCCCCCCC

mRNA sequence

ATGGCTAGAAGCTCGTTCAAACTTGGAATTCCTTTGGAAAAGAGACGGGCTGAAGCTGCTCGAGTAAGAGAAAAGTACCCGGATAGAATACCTGTGATTGTCGAGAAAGCTGGGAGGAGTAACATTGTTGACATTCATAGGAACAAATACCTCGTCCCTGATGATTTAAATGTTGGACAGTTTGTTTACGTTGTTCGGAAACGGATTAAGCTTAGTGCTGAGAGAGCTATATTTGTATTTGTGAAGGACACTCTACCTTCAACTGGTGCTTTGATGTCTGCAATTTATGAGCATTATAAGGATGAAGATGGGTTTCTTTACATGTCATACAGTGGAGAAAACACTTTTGGTGGGTTCCTTGGAGGACAATGATACATTTACATGGATGTTGTGACAAATCTACCTAATTTACTTGGAGCTTTTCTTGCGAGGGTTAATGATCCACTTGATGCCGTTAGATATTCCACTTCCTATCTTTTTGGCACCAGCCACGGTCGCCGCCATGGCTTTTGCTATTCCAGCCTTAGAACCAGCCTTCTTGTCCGAGCCCTGGCCCCCTTTGGCTTTACTGCCGTCGTCTTCTTCCATGGCGCCTATGCCTCCAGCTCCCCATTGGTCTGCCCAGCTTGGTGCTTCTGCAGCCATGGTTTCTAATTCCAACCAATACAACATCAAATTCACTGTCTATCCATTATTGGTGTTGAAAGTAACAGCAACCAAATTTATGCCTAAAAAAACTAATTCATGTTCGGATGACCATTGAATTTACCCAGATTAGTAAAGCGAACAGAAAGTTACAACTTTCTCGCTGTCATATTGTCTAAACCATTTCTAAGACGATATAAACGAAACCTCAGAGAGAGATCTGATCTAAAGATTTTATTCATAAGAAAGAGCTTATCTTGAACTTCAAGAAGCACAAACAAAGTGTGGAATTCGAGGTGCAAGAAGCAACGAGATACAGTTAAGAGTCATACCTGGGGATCCAAACCGATGAAGAACTACAGAAACTTAGTGAAGGAATTCGAGGAAGATTAGAAAATAATTGGCAGAAACTCCTTTAGGAAGCAGCAGCAGCAGAACGCAGGGCCATAGGTGGATGGGCTGTCTTTTACTCCCACTGCAATATTACTTTTTTAAAGAGCTTGCCAACTCCTGGTTTCCATCTAACGAAGCAAACTATGTCTTTTGGGCATCTTTTTCTTTCTAATAAAATATATATATATACACATCTTTAATCCTCCTCGTAATCACAAGGCATCTTATTCTCACAAGGCCCGTAAACCTGGACCAGATGTCTACTGATATAACCACCTGGGTTCAAACTCAAACTTCTAATCAAATCCATCAATTATTCAAGAATCACATGTATTCCCCCCCCC

Coding sequence (CDS)

ATGGCTAGAAGCTCGTTCAAACTTGGAATTCCTTTGGAAAAGAGACGGGCTGAAGCTGCTCGAGTAAGAGAAAAGTACCCGGATAGAATACCTGTGATTGTCGAGAAAGCTGGGAGGAGTAACATTGTTGACATTCATAGGAACAAATACCTCGTCCCTGATGATTTAAATGTTGGACAGTTTGTTTACGTTGTTCGGAAACGGATTAAGCTTAGTGCTGAGAGAGCTATATTTGTATTTGTGAAGGACACTCTACCTTCAACTGGTGCTTTGATGTCTGCAATTTATGAGCATTATAAGGATGAAGATGGGTTTCTTTACATGTCATACAGTGGAGAAAACACTTTTGGTGGGTTCCTTGGAGGACAATGA

Protein sequence

MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQFVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGFLGGQ

Homology

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BLAST of CmaCh03G005400 vs. ExPASy Swiss-Prot
Match: M1C146 (Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 1.1e-46
Identity = 94/119 (78.99%), Postives = 106/119 (89.08%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           MA+SSFKL  PLE+R+AEAAR+REKYPDRIPVIVEKA RS+I DI + KYLVP DL VGQ
Sbjct: 1   MAKSSFKLEHPLERRQAEAARIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGF 120
           FVYVVRKRIKLSAE+AIF+FVK+ LP T A+MSAIYE +KDEDGFLYM+YSGENTFG F
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNILPPTAAMMSAIYEEHKDEDGFLYMTYSGENTFGSF 119

[Close]

BLAST of CmaCh03G005400 vs. ExPASy Swiss-Prot
Match: A2YS06 (Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=3 SV=2)

HSP 1 Score: 186.8 bits (473), Expect = 1.5e-46
Identity = 96/120 (80.00%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           MARSSFKL  PLE+R+AEA R+REKYPDRIPVIVEKA RS+I DI + KYLVP DL VGQ
Sbjct: 1   MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAE+AIF+FVK+TLP T ALMSAIYE  KDEDGFLYM+YSGENTFG F+
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGLFV 120

[Close]

BLAST of CmaCh03G005400 vs. ExPASy Swiss-Prot
Match: Q6Z1D5 (Autophagy-related protein 8C OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8C PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.5e-46
Identity = 96/120 (80.00%), Postives = 106/120 (88.33%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           MARSSFKL  PLE+R+AEA R+REKYPDRIPVIVEKA RS+I DI + KYLVP DL VGQ
Sbjct: 1   MARSSFKLEHPLERRQAEANRIREKYPDRIPVIVEKAERSDIPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAE+AIF+FVK+TLP T ALMSAIYE  KDEDGFLYM+YSGENTFG F+
Sbjct: 61  FVYVVRKRIKLSAEKAIFIFVKNTLPPTAALMSAIYEENKDEDGFLYMTYSGENTFGLFV 120

[Close]

BLAST of CmaCh03G005400 vs. ExPASy Swiss-Prot
Match: Q8LEM4 (Autophagy-related protein 8a OS=Arabidopsis thaliana OX=3702 GN=ATG8A PE=1 SV=2)

HSP 1 Score: 183.0 bits (463), Expect = 2.1e-45
Identity = 90/117 (76.92%), Postives = 104/117 (88.89%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           MA+SSFK+  PLE R +E++R+REKYPDRIPVIVEKAG+S++ DI + KYLVP DL VGQ
Sbjct: 1   MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKL AE+AIFVFVK+TLP T ALMSAIYE +KDEDGFLYM+YSGENTFG
Sbjct: 61  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of CmaCh03G005400 vs. ExPASy Swiss-Prot
Match: Q9SL04 (Autophagy-related protein 8d OS=Arabidopsis thaliana OX=3702 GN=ATG8D PE=1 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 1.8e-44
Identity = 92/119 (77.31%), Postives = 103/119 (86.55%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           MA SSFK   PLEKR+AEAAR+REKYPDRIPVIVE+A +S++ DI R KYLVP DL VGQ
Sbjct: 1   MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGF 120
           FVYVVRKRIKLS E+AIF+FVK+ LP T A+MSAIYE +KDEDGFLYMSYSGENTFG F
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFGIF 119

[Close]

BLAST of CmaCh03G005400 vs. ExPASy TrEMBL
Match: A0A6J1IP81 (Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111478695 PE=3 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.7e-61
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ
Sbjct: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 124
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CmaCh03G005400 vs. ExPASy TrEMBL
Match: A0A6J1GDU9 (Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111453258 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.2e-56
Identity = 117/123 (95.12%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           MARSSFKLGIPLE+RRAEAARVREKYPDRIPVIVEKAGRSNIVDI RNKYLVP DL VGQ
Sbjct: 1   MARSSFKLGIPLERRRAEAARVREKYPDRIPVIVEKAGRSNIVDIDRNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMS IYEH KDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSVIYEHNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 124
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CmaCh03G005400 vs. ExPASy TrEMBL
Match: A0A1S3B043 (Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103484614 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 7.5e-54
Identity = 112/123 (91.06%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           MARSSFKLGIPLEKR+AEAAR+REKYPDRIPVIVEKAGRS+I DI RNKYLVP DL VGQ
Sbjct: 1   MARSSFKLGIPLEKRQAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPTDLTVGQ 60

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAE+AIFVFVKDTLPSTGALMSAIY   KDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 124
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CmaCh03G005400 vs. ExPASy TrEMBL
Match: A0A5D3CPT6 (Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006460 PE=3 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 7.5e-54
Identity = 112/123 (91.06%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           MARSSFKLGIPLEKR+AEAAR+REKYPDRIPVIVEKAGRS+I DI RNKYLVP DL VGQ
Sbjct: 1   MARSSFKLGIPLEKRQAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPTDLTVGQ 60

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAE+AIFVFVKDTLPSTGALMSAIY   KDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 124
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CmaCh03G005400 vs. ExPASy TrEMBL
Match: A0A0A0KJW7 (Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_6G513730 PE=3 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 8.3e-53
Identity = 111/123 (90.24%), Postives = 114/123 (92.68%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           MARSS KLGIPLEKR AEAAR+REKYPDRIPVIVEKAGRS+I DI RNKYLVP DL VGQ
Sbjct: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAE+AIFVFVKDTLPSTGALMSAIY   KDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 124
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CmaCh03G005400 vs. NCBI nr
Match: XP_022978871.1 (autophagy-related protein 8C-like [Cucurbita maxima])

HSP 1 Score: 243.8 bits (621), Expect = 7.7e-61
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ
Sbjct: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 124
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CmaCh03G005400 vs. NCBI nr
Match: KAG6603779.1 (Autophagy-related protein 8C, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033949.1 Autophagy-related protein 8C [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229.9 bits (585), Expect = 1.1e-56
Identity = 118/123 (95.93%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDI RNKYLVP DL VGQ
Sbjct: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIDRNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMS IYEH KDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSVIYEHNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 124
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CmaCh03G005400 vs. NCBI nr
Match: XP_022950063.1 (autophagy-related protein 8C-like [Cucurbita moschata])

HSP 1 Score: 228.8 bits (582), Expect = 2.6e-56
Identity = 117/123 (95.12%), Postives = 118/123 (95.93%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           MARSSFKLGIPLE+RRAEAARVREKYPDRIPVIVEKAGRSNIVDI RNKYLVP DL VGQ
Sbjct: 1   MARSSFKLGIPLERRRAEAARVREKYPDRIPVIVEKAGRSNIVDIDRNKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMS IYEH KDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSVIYEHNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 124
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CmaCh03G005400 vs. NCBI nr
Match: XP_008439996.1 (PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_008439997.1 PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_016899344.1 PREDICTED: autophagy-related protein 8C [Cucumis melo] >TYK13044.1 autophagy-related protein 8C [Cucumis melo var. makuwa])

HSP 1 Score: 219.5 bits (558), Expect = 1.6e-53
Identity = 112/123 (91.06%), Postives = 116/123 (94.31%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           MARSSFKLGIPLEKR+AEAAR+REKYPDRIPVIVEKAGRS+I DI RNKYLVP DL VGQ
Sbjct: 1   MARSSFKLGIPLEKRQAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPTDLTVGQ 60

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAE+AIFVFVKDTLPSTGALMSAIY   KDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 124
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CmaCh03G005400 vs. NCBI nr
Match: XP_004134765.1 (autophagy-related protein 8C [Cucumis sativus] >XP_011658146.1 autophagy-related protein 8C [Cucumis sativus] >XP_011658147.1 autophagy-related protein 8C [Cucumis sativus] >KGN49109.1 hypothetical protein Csa_003738 [Cucumis sativus])

HSP 1 Score: 216.1 bits (549), Expect = 1.7e-52
Identity = 111/123 (90.24%), Postives = 114/123 (92.68%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           MARSS KLGIPLEKR AEAAR+REKYPDRIPVIVEKAGRS+I DI RNKYLVP DL VGQ
Sbjct: 1   MARSSLKLGIPLEKRLAEAARIREKYPDRIPVIVEKAGRSDIADIDRNKYLVPKDLTVGQ 60

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGFL 120
           FVYVVRKRIKLSAE+AIFVFVKDTLPSTGALMSAIY   KDEDGFLYMSYSGENTFGGFL
Sbjct: 61  FVYVVRKRIKLSAEKAIFVFVKDTLPSTGALMSAIYADNKDEDGFLYMSYSGENTFGGFL 120

Query: 121 GGQ 124
           GGQ
Sbjct: 121 GGQ 123

[Close]

BLAST of CmaCh03G005400 vs. TAIR 10
Match: AT4G21980.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 183.0 bits (463), Expect = 1.5e-46
Identity = 90/117 (76.92%), Postives = 104/117 (88.89%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           MA+SSFK+  PLE R +E++R+REKYPDRIPVIVEKAG+S++ DI + KYLVP DL VGQ
Sbjct: 1   MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKL AE+AIFVFVK+TLP T ALMSAIYE +KDEDGFLYM+YSGENTFG
Sbjct: 61  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117

[Close]

BLAST of CmaCh03G005400 vs. TAIR 10
Match: AT4G21980.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 183.0 bits (463), Expect = 1.5e-46
Identity = 90/117 (76.92%), Postives = 104/117 (88.89%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           MA+SSFK+  PLE R +E++R+REKYPDRIPVIVEKAG+S++ DI + KYLVP DL VGQ
Sbjct: 16  MAKSSFKISNPLEARMSESSRIREKYPDRIPVIVEKAGQSDVPDIDKKKYLVPADLTVGQ 75

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFG 118
           FVYVVRKRIKL AE+AIFVFVK+TLP T ALMSAIYE +KDEDGFLYM+YSGENTFG
Sbjct: 76  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 132

[Close]

BLAST of CmaCh03G005400 vs. TAIR 10
Match: AT2G05630.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 179.9 bits (455), Expect = 1.3e-45
Identity = 92/119 (77.31%), Postives = 103/119 (86.55%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           MA SSFK   PLEKR+AEAAR+REKYPDRIPVIVE+A +S++ DI R KYLVP DL VGQ
Sbjct: 1   MAISSFKHEHPLEKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQ 60

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGGF 120
           FVYVVRKRIKLS E+AIF+FVK+ LP T A+MSAIYE +KDEDGFLYMSYSGENTFG F
Sbjct: 61  FVYVVRKRIKLSPEKAIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFGIF 119

[Close]

BLAST of CmaCh03G005400 vs. TAIR 10
Match: AT4G04620.1 (Ubiquitin-like superfamily protein )

HSP 1 Score: 178.7 bits (452), Expect = 2.8e-45
Identity = 87/118 (73.73%), Postives = 102/118 (86.44%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           M ++SFKL  PLE R AE+ R+R KYP+R+PVIVEKAG+S++ DI + KYLVP DL +GQ
Sbjct: 1   MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQ 60

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGG 119
           FVYVVRKRIKL AE+AIFVFVK+TLP T ALMSAIYE +KDEDGFLYM+YSGENTFGG
Sbjct: 61  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGG 118

[Close]

BLAST of CmaCh03G005400 vs. TAIR 10
Match: AT4G04620.2 (Ubiquitin-like superfamily protein )

HSP 1 Score: 178.7 bits (452), Expect = 2.8e-45
Identity = 87/118 (73.73%), Postives = 102/118 (86.44%), Query Frame = 0


Query: 1   MARSSFKLGIPLEKRRAEAARVREKYPDRIPVIVEKAGRSNIVDIHRNKYLVPDDLNVGQ 60
           M ++SFKL  PLE R AE+ R+R KYP+R+PVIVEKAG+S++ DI + KYLVP DL +GQ
Sbjct: 1   MEKNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQ 60

Query: 61  FVYVVRKRIKLSAERAIFVFVKDTLPSTGALMSAIYEHYKDEDGFLYMSYSGENTFGG 119
           FVYVVRKRIKL AE+AIFVFVK+TLP T ALMSAIYE +KDEDGFLYM+YSGENTFGG
Sbjct: 61  FVYVVRKRIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFGG 118

The following BLAST results are available for this feature:

BLAST of CmaCh03G005400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
M1C146	1.1e-46	78.99	Autophagy-related protein 8C-like OS=Solanum tuberosum OX=4113 GN=ATG8CL PE=1 SV...	[more]
A2YS06	1.5e-46	80.00	Autophagy-related protein 8C OS=Oryza sativa subsp. indica OX=39946 GN=ATG8C PE=...	[more]
Q6Z1D5	1.5e-46	80.00	Autophagy-related protein 8C OS=Oryza sativa subsp. japonica OX=39947 GN=ATG8C P...	[more]
Q8LEM4	2.1e-45	76.92	Autophagy-related protein 8a OS=Arabidopsis thaliana OX=3702 GN=ATG8A PE=1 SV=2	[more]
Q9SL04	1.8e-44	77.31	Autophagy-related protein 8d OS=Arabidopsis thaliana OX=3702 GN=ATG8D PE=1 SV=1	[more]

BLAST of CmaCh03G005400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IP81	3.7e-61	100.00	Autophagy-related protein OS=Cucurbita maxima OX=3661 GN=LOC111478695 PE=3 SV=1	[more]
A0A6J1GDU9	1.2e-56	95.12	Autophagy-related protein OS=Cucurbita moschata OX=3662 GN=LOC111453258 PE=3 SV=...	[more]
A0A1S3B043	7.5e-54	91.06	Autophagy-related protein OS=Cucumis melo OX=3656 GN=LOC103484614 PE=3 SV=1	[more]
A0A5D3CPT6	7.5e-54	91.06	Autophagy-related protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A0A0KJW7	8.3e-53	90.24	Autophagy-related protein OS=Cucumis sativus OX=3659 GN=Csa_6G513730 PE=3 SV=1	[more]

BLAST of CmaCh03G005400 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978871.1	7.7e-61	100.00	autophagy-related protein 8C-like [Cucurbita maxima]	[more]
KAG6603779.1	1.1e-56	95.93	Autophagy-related protein 8C, partial [Cucurbita argyrosperma subsp. sororia] >K...	[more]
XP_022950063.1	2.6e-56	95.12	autophagy-related protein 8C-like [Cucurbita moschata]	[more]
XP_008439996.1	1.6e-53	91.06	PREDICTED: autophagy-related protein 8C [Cucumis melo] >XP_008439997.1 PREDICTED...	[more]
XP_004134765.1	1.7e-52	90.24	autophagy-related protein 8C [Cucumis sativus] >XP_011658146.1 autophagy-related...	[more]

BLAST of CmaCh03G005400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G21980.1	1.5e-46	76.92	Ubiquitin-like superfamily protein	[more]
AT4G21980.2	1.5e-46	76.92	Ubiquitin-like superfamily protein	[more]
AT2G05630.1	1.3e-45	77.31	Ubiquitin-like superfamily protein	[more]
AT4G04620.1	2.8e-45	73.73	Ubiquitin-like superfamily protein	[more]
AT4G04620.2	2.8e-45	73.73	Ubiquitin-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004241	Autophagy protein Atg8 ubiquitin-like	PFAM	PF02991	Atg8	coord: 14..117 e-value: 1.4E-46 score: 156.9
IPR004241	Autophagy protein Atg8 ubiquitin-like	PANTHER	PTHR10969	MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED	coord: 1..117
None	No IPR available	GENE3D	3.10.20.90		coord: 1..117 e-value: 4.4E-53 score: 180.5
None	No IPR available	PANTHER	PTHR10969:SF77	AUTOPHAGY-RELATED PROTEIN	coord: 1..117
None	No IPR available	CDD	cd16128	Ubl_ATG8	coord: 12..114 e-value: 8.80337E-63 score: 184.972
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 4..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G005400.1	CmaCh03G005400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0006995	cellular response to nitrogen starvation
cellular_component	GO:0016020	membrane
cellular_component	GO:0005874	microtubule