CmaCh03G005390 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAATCCCATCCCGGTGAAGGAAAGTGATTAAATGAATGAAAAAAAGGTACCGTCTGATCTTATCTTTGCTTTATTCAAACTATTTTCTTTTTCTTCCACCACAGATATAAAAGGGTTTTCATTATCTTAATGATTATCACCCTCACTTGAATTTGATTTTTGATTGCCCCATTATATGATTTTCTGTTCTTTCTTTCTTTCTTACTTGGAATCCACAGTCTTGAACTGTTTAGTTTAAAGGTGAAAGTCCTAGTCAGCACTGCAGTTCATTTGTAAACTCAATCTTTTTGAACTCTTAACTCTCACTCTTTCTGATTGTGGTGGTGGTGATGCAAAAATCTAAGTTAGGCGCATTTAATCAAATCGCCACATCTCCCTCTGAGGGAGGGCCATCTGGTTCATGTCATTTCAGAGTATTTTTTGCCGGTATATCTTTGGCAAAAGTGTTGTTTTTGGTAAAAAAAAAAAAGTTCCCATTTCAAAAGTAAGCATTCTTTGAGTGTTCAATTGGAATACAACGACACCCAATAAAAGGAATTAAAAAAATGTTTGATTGTTTGTCAAAAACCGAGGTGGTTTCATTTTTTTTATCCTTCTGTCGAATACGTTTGAAAATGAGTTCAACTGGGAAGATTTCCAAATAGAAAAAGAAGAGAAGGTGGATGATTTTGTTGTTTCATGAAACAGGCCCTCTGCATGAACCGAACATGGAGGGTTGACCCACACACGCTCTCGTGTCATTTTCGAACAGACATTATGATTTGAGCTTGAGAAGACACCTCACCGTCTCTCCCTCAATACCAAGACAGGTGCCTCTCTTTCTCTCTCTCTCTCTTGTCTTCTCTCTCCCCCATAAATCCCAAAGCTCCTTGAAACATTGGAGATTGAAGTAGTATGGATGGAAATTTTGAAGTGCTAAAGATCCTTGGTGGCCAAAACTTGGGTCACATATCTCAATGCAGCAGCAAGGCAGAAGCAAATTAAGTGCTTTTACTCCTCTGGCACCTTCTTCAAGGCCAGCTTCAGAGATTGAAAAAAGCAATGGAAATAGATTACTGAGGTTCTCTGACTGTCACTAGGAATGAGATGGGTTGTGCTGCGACTTAAGAGGATAAGGTTACGGAAATCAGTGAGGTTTTGGTCAGACTCTTTGAGTCTCTTACTCATCGTTCCCCATCATCTTTCCCAATCAAAACCCACCCTTTTCTTCTAAACATTCAACTCCAACTTCCCTTCATCTTCTTTTGCTTTTGCTTTGCTTTGCTTTGCTTTGATTTTTGTTTGAGTTTCGTTTCAAACCAACCCTCCATCATCAGTTTCATTTAACTCAGATTCTCTTCAAATCCCATCCTTTCTCTTCCAATTATTTCAGCTTTTTGATATGCCATGAAAGTACAATTCATCTGTTTTTCGCTATCCTTTTTGGGGTTTCCCTATTCTTGCTGGGTGTCATTTCTGAGTCTGAACCGAGGCCCTTGAAATTTGTGATTTTCTCTGGTAGTATTCAGGTCAGGCCAAGGGTGATTTTTTTTCTTTTCTTCTCTGGGTTTGTCACGGTTACTTTTGGGGCTCTGCACCTCACCCTGCATCTTACTCATTTTCAGAAAGAAATAAAAATCTGATATAAATATCCGTGTGAAAGCCCAGTTTCTTTAGAAGAGTGATCAAGCCAGGCAGGTAAGTAAGTTCATTTCATATTGCTTCTCTCTCTCTCTCAGACTCTGTTCCTTTTTGTTCCCGAGGAGATTACCCAGTTCAGTTCCGTCGCATTCTCACTTTCTTCAGCACCAAAAATGAAACAAAATATGTTATATTTATATTGGAACTAGTGACTCTGCTTTACTCATTGTTAACAACTGATTTCTTTTTCCATTTTTGTTGTACCCATCTTTCTCTTATTGGCTCATGGACTAAACTTGTTTTTCTGTTTTAGAGCAACCAGTATGGCAGGTTCCAACACCAGATGGAGCCATGGGTTTCATGGAAAATCAATCAAAGACGAAGACTTTGATGAAGAACAAGCGTGGGGCTTTCCCAGCGAAACCAAAAAAGAAGAAGCTTCTAGCCCCGTGGCAACAAAATTTAAGCACTTCAATTCATCAGCCTCTTCTTCTTCTTCTTCTAATTCCTCTGCTTGGTGCATGCAGATCAGCTCTGCTCCAAAAATGATCCCTAAAGCCAAAACCACACCCAATCAAGAACCCAAAACTGTGAAGAGATCCTCAGCTCCTTTGGAGATACCAGACTGGTCCAAGATATATGGAAGAAATGGCAACATGGGTGGTTCATGGATGGACGAGGGATACGGCTTTATTAACGATGATGATGATGAGGAGGAGGAGGAGGATGATGTTATGGTTCCTCCACATGAATGGATTGCTAGGAAGCTTGCAAGGACCCAAATTTCATCCTTCTCAGTTTGTGAAGGCATTGGAAGAACATTGAAGGGAAGAGATCTGAGTAAAGTGAGAAATGCCATATTGACCAAAACTGGGTTTTTGGAGTGA ATGAAATCCCATCCCGGTGAAGGAAATCTTGAACTGTTTAGTTTAAAGTTAGGCGCATTTAATCAAATCGCCACATCTCCCTCTGAGGGAGGGCCATCTGGTTCATGTCATTTCAGAGTATTTTTTGCCGGAATGAGATGGGTTGTGCTGCGACTTAAGAGGATAAGGTTACGGAAATCAGTGAGCTTTTTGATATGCCATGAAAGTACAATTCATCTGTTTTTCGCTATCCTTTTTGGGGTTTCCCTATTCTTGCTGGGTGTCATTTCTGAGTCTGAACCGAGGCCCTTGAAATTTGTGATTTTCTCTGGTAGTATTCAGCCCAGTTTCTTTAGAAGAGTGATCAAGCCAGGCAGAGCAACCAGTATGGCAGGTTCCAACACCAGATGGAGCCATGGGTTTCATGGAAAATCAATCAAAGACGAAGACTTTGATGAAGAACAAGCGTGGGGCTTTCCCAGCGAAACCAAAAAAGAAGAAGCTTCTAGCCCCGTGGCAACAAAATTTAAGCACTTCAATTCATCAGCCTCTTCTTCTTCTTCTTCTAATTCCTCTGCTTGGTGCATGCAGATCAGCTCTGCTCCAAAAATGATCCCTAAAGCCAAAACCACACCCAATCAAGAACCCAAAACTGTGAAGAGATCCTCAGCTCCTTTGGAGATACCAGACTGGTCCAAGATATATGGAAGAAATGGCAACATGGGTGGTTCATGGATGGACGAGGGATACGGCTTTATTAACGATGATGATGATGAGGAGGAGGAGGAGGATGATGTTATGGTTCCTCCACATGAATGGATTGCTAGGAAGCTTGCAAGGACCCAAATTTCATCCTTCTCAGTTTGTGAAGGCATTGGAAGAACATTGAAGGGAAGAGATCTGAGTAAAGTGAGAAATGCCATATTGACCAAAACTGGGTTTTTGGAGTGA ATGAAATCCCATCCCGGTGAAGGAAATCTTGAACTGTTTAGTTTAAAGTTAGGCGCATTTAATCAAATCGCCACATCTCCCTCTGAGGGAGGGCCATCTGGTTCATGTCATTTCAGAGTATTTTTTGCCGGAATGAGATGGGTTGTGCTGCGACTTAAGAGGATAAGGTTACGGAAATCAGTGAGCTTTTTGATATGCCATGAAAGTACAATTCATCTGTTTTTCGCTATCCTTTTTGGGGTTTCCCTATTCTTGCTGGGTGTCATTTCTGAGTCTGAACCGAGGCCCTTGAAATTTGTGATTTTCTCTGGTAGTATTCAGCCCAGTTTCTTTAGAAGAGTGATCAAGCCAGGCAGAGCAACCAGTATGGCAGGTTCCAACACCAGATGGAGCCATGGGTTTCATGGAAAATCAATCAAAGACGAAGACTTTGATGAAGAACAAGCGTGGGGCTTTCCCAGCGAAACCAAAAAAGAAGAAGCTTCTAGCCCCGTGGCAACAAAATTTAAGCACTTCAATTCATCAGCCTCTTCTTCTTCTTCTTCTAATTCCTCTGCTTGGTGCATGCAGATCAGCTCTGCTCCAAAAATGATCCCTAAAGCCAAAACCACACCCAATCAAGAACCCAAAACTGTGAAGAGATCCTCAGCTCCTTTGGAGATACCAGACTGGTCCAAGATATATGGAAGAAATGGCAACATGGGTGGTTCATGGATGGACGAGGGATACGGCTTTATTAACGATGATGATGATGAGGAGGAGGAGGAGGATGATGTTATGGTTCCTCCACATGAATGGATTGCTAGGAAGCTTGCAAGGACCCAAATTTCATCCTTCTCAGTTTGTGAAGGCATTGGAAGAACATTGAAGGGAAGAGATCTGAGTAAAGTGAGAAATGCCATATTGACCAAAACTGGGTTTTTGGAGTGA MKSHPGEGNLELFSLKLGAFNQIATSPSEGGPSGSCHFRVFFAGMRWVVLRLKRIRLRKSVSFLICHESTIHLFFAILFGVSLFLLGVISESEPRPLKFVIFSGSIQPSFFRRVIKPGRATSMAGSNTRWSHGFHGKSIKDEDFDEEQAWGFPSETKKEEASSPVATKFKHFNSSASSSSSSNSSAWCMQISSAPKMIPKAKTTPNQEPKTVKRSSAPLEIPDWSKIYGRNGNMGGSWMDEGYGFINDDDDEEEEEDDVMVPPHEWIARKLARTQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE Homology
BLAST of CmaCh03G005390 vs. ExPASy TrEMBL
Match: A0A6J1IRG2 (uncharacterized protein LOC111478694 OS=Cucurbita maxima OX=3661 GN=LOC111478694 PE=4 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 7.8e-100 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of CmaCh03G005390 vs. ExPASy TrEMBL
Match: A0A6J1GF36 (uncharacterized protein LOC111453373 OS=Cucurbita moschata OX=3662 GN=LOC111453373 PE=4 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 7.8e-92 Identity = 177/187 (94.65%), Postives = 180/187 (96.26%), Query Frame = 0
BLAST of CmaCh03G005390 vs. ExPASy TrEMBL
Match: A0A1S3B0T6 (uncharacterized protein LOC103484610 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484610 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 6.2e-73 Identity = 156/200 (78.00%), Postives = 169/200 (84.50%), Query Frame = 0
BLAST of CmaCh03G005390 vs. ExPASy TrEMBL
Match: A0A1S4DT69 (uncharacterized protein LOC103484610 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484610 PE=4 SV=1) HSP 1 Score: 284.3 bits (726), Expect = 6.2e-73 Identity = 156/200 (78.00%), Postives = 169/200 (84.50%), Query Frame = 0
BLAST of CmaCh03G005390 vs. ExPASy TrEMBL
Match: A0A5D3CRL7 (Zinc-regulated protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006480 PE=4 SV=1) HSP 1 Score: 283.5 bits (724), Expect = 1.1e-72 Identity = 156/202 (77.23%), Postives = 169/202 (83.66%), Query Frame = 0
BLAST of CmaCh03G005390 vs. NCBI nr
Match: KAG7033948.1 (hypothetical protein SDJN02_03674, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 454.9 bits (1169), Expect = 5.5e-124 Identity = 236/256 (92.19%), Postives = 244/256 (95.31%), Query Frame = 0
BLAST of CmaCh03G005390 vs. NCBI nr
Match: XP_022978870.1 (uncharacterized protein LOC111478694 [Cucurbita maxima]) HSP 1 Score: 373.6 bits (958), Expect = 1.6e-99 Identity = 187/187 (100.00%), Postives = 187/187 (100.00%), Query Frame = 0
BLAST of CmaCh03G005390 vs. NCBI nr
Match: XP_023543720.1 (uncharacterized protein LOC111803513 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 352.1 bits (902), Expect = 5.0e-93 Identity = 179/187 (95.72%), Postives = 182/187 (97.33%), Query Frame = 0
BLAST of CmaCh03G005390 vs. NCBI nr
Match: KAG6603778.1 (hypothetical protein SDJN03_04387, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 349.4 bits (895), Expect = 3.3e-92 Identity = 178/188 (94.68%), Postives = 183/188 (97.34%), Query Frame = 0
BLAST of CmaCh03G005390 vs. NCBI nr
Match: XP_022950214.1 (uncharacterized protein LOC111453373 [Cucurbita moschata] >XP_022950215.1 uncharacterized protein LOC111453373 [Cucurbita moschata]) HSP 1 Score: 347.1 bits (889), Expect = 1.6e-91 Identity = 177/187 (94.65%), Postives = 180/187 (96.26%), Query Frame = 0
BLAST of CmaCh03G005390 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 140.2 bits (352), Expect = 2.8e-33 Identity = 88/170 (51.76%), Postives = 111/170 (65.29%), Query Frame = 0
BLAST of CmaCh03G005390 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 123.2 bits (308), Expect = 3.5e-28 Identity = 80/168 (47.62%), Postives = 101/168 (60.12%), Query Frame = 0
BLAST of CmaCh03G005390 vs. TAIR 10
Match: AT5G60680.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 94.4 bits (233), Expect = 1.8e-19 Identity = 57/128 (44.53%), Postives = 79/128 (61.72%), Query Frame = 0
BLAST of CmaCh03G005390 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 84.0 bits (206), Expect = 2.4e-16 Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 0
BLAST of CmaCh03G005390 vs. TAIR 10
Match: AT1G11700.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 82.8 bits (203), Expect = 5.3e-16 Identity = 45/96 (46.88%), Postives = 62/96 (64.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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