CmaCh03G005220 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh03G005220
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptiontyrosyl-DNA phosphodiesterase 1
LocationCma_Chr03: 5003712 .. 5010081 (+)
RNA-Seq ExpressionCmaCh03G005220
SyntenyCmaCh03G005220
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATTCAGTCCGTCGACCGCTTCAGCACTAACAACAAATTCCGTCATTCATCGGGTTTCCACGCCGGCCAAACCCCCCATTTTCATCGCCATTCCCACAGATTTTGCAGTATTCCCCTTCTCCGTTCTGGCCCCTCTCCTTAAAGCATCGCCATCATCAGCTTATTTCACCTTTGCCTTCATCAAGCCCTTCTCCTCTCACTCTAAAACGGTCTCCCTTCTCGGCAATGGCTCGCCTCCAGGTCCAGACTTCTCAGCTTACACTGGGCTTATTTACTATTATTATTTCCTGTTATTTGTTTTCTCTAATTACTTTTCTATGTTCTTCTCCGGGAAGAAGGTTGGGTATTTGGTTCCACTTGATAAAAATCTAGAGGAAGGCAATTCGGAGCTAAAGATACCCCTCTCTCAGGGCCCAAATATCATCGGCCGTAGCAACGTTCTCGTTTCTGATAAGAGGATCAGCCGCAAGCATATCACTCTTACCACCTCCACTGACGGTTCTGCTAAACTATTTGTGGTAGCCTACAACTTCCCTCACCTGATACCAAGTTTTGTTGATATAATTTGATGTAGGTTTGCATATGGCGTAATCGCGTGAAGATTTATTTGTTCTAATTGTAGGAAGGTGCAAATCCAGTTGTTATTAATTCTGGTGATGGTAGAAAGAAACTTGGTCCTCGTGAAAGTGTGATACTTCGGGACGGGGAGGTTATAGAATTGATTCCCGGCCATTATCTTTTCAAGTATGCAGCTCATTGTCCCAATACAAGGCCCGATTCTGAGGATTTGGGACAGAAGAGAGTTCGACAACTTGTGGACGATCAAATTTCTGAGGGAAAGGCTAAAGTATTGTCAAAAAGTTGTTAATTTTTGCTTTAATTGATTGTTTTCTTTTCTATGTATTATAATTTTCAGTCACCCTATGGAATTTTCAATTTGGATCGTTGGGGAATTGAAGATTCTTCATCTTCCCTTCTTTTTTGATGTCGCTATACACTCGTGTAGAGAGTTGAAATGGGAGGCCCTTTGGAGAATCAACAAACTGGGATCTCGCAGTCGAAGAAAGATAATAGCGTGGAGGCCATTCGCAATTTTCATGTTCCCGACGACAAATTGCCCATGACTTTCAGACTTTTGAGTGTTAAAGGCCTGCCACCATGGGCTAATACATCATGTGTGAGGATTAGTGATGTTATACAGGTAGTTAGAGGCATTTTTAATCTTCCTTTTATTGATTGAGTTTTCTCACAAATGGCAGCTACTGTGCAACTGAATTAATTATTATATTTTGTTAAGTTTCATATACTCTATTTTGTTCTATTCCCTGTTGTGAAATTGTTTTTCAGTTTGATGTGTATATTCTATATAGGTAATTTTAGTTTGCATTGAAAATTTGGTTTTTATTTCTCAGGGAGACATTCTCTTTGCCGTCCTGTCAAATTACATGGTGGATATGGATTGGTTAATACCTGGTGAGCTCAACTCTCCCTCCATCTCTTTGCAAGTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCATGTTTTAATTGTTTCATATTTATGAACTTCCTCCTGGTTCATCGAAGTTGGTCGGTGTAATTTGAGTAATGTGTACACAGACAGGTTATTATCTAGTCCTACATGATATTCATGTTTTTATTGCATTCGGCCATTCATCAGATAAGCAGTTTCTGAATCTAGTTTTGTCATTATTGCTTCTGGTTTTACAAGCATTTTAATTTTAAGCCGGTCAGTTGTTACGTGACTTCACCAACTAATTTGTTGTGATTCATTTAGTTTTTTCCTGACCATATGTTTTTTTGTACTGTATTTGGTGCAGCATGTCCCACTCTTGCAAAAGTCCCTCACGTGCTGGTTATTCATGGCGAGGGTGATGGAACACTGGATCATATGAAGGTAGACTGTTTTAATTTAAACTAAATTTACATTTAAGTGGGCAGAATTTAACCGTTGGGTTATATGGATCATAGAGGAAGAAGCCTGCAAATTGGATTTTGCACAAACCACCACTACCCATATCGTTTGGGACTCACCATTCAAAAGCAATATTTCTTGTCTATCCTCGAGGAATAAGAATGGTTGTACACACCGCAAATCTAATCTATGTTGATTGGAACAACAAAAGCCAAGGTTTGTGGATGCAAGATTTCCCTTGGAAAGATCAAAATTCCTCTACAAGAGGATGTGCATTTGAAGATGACTTGGTTGACTATCTTAGTGCTTTGAAGGTACAAACATAGTTACTAAGAAAAAACGTGAAAATATTTAGATATGTGCTTACTGCCGTTGAGATAAGACTAAGTTGCTGTAGGATGGTTCTTCTTCTTCAGCATATCGTCCGTATTGAAAATGGGAATGGTTATTCTTTTTCCTCCTAACTATTTGCAGTGGCCAGAATTTCCTGCTAATTTTCCAGCACTTGGAAACTTCAATGTCAATCCATCGTTTTTCAGAAAGTTTGATTATAGTAATGCAGCGGTACTTGATCAATTACCCAAGTTTGTATTTTTCCATTTCCAGGATCATTTTTTGGTATTTATTTTGATCTTGTTGACTAATCTATTATAGTATGGAGCACACTTGATTTCAGGTTAGATTGATCGCTTCTGTACCTGGATATCATACGGGTCGCCATTTAAAGAAGTGGGGCCATATGAAGCTACGTTCTGTTCTCCAGGAATGTGTTTTTGATAAAGAGTTTAAGCGATCTCCTCTTGTTTACCAGGTAAATTACTAACCTCACTAGTTAATAGAAATGAGTTTTTTAATGGACCAAACACTCGTAGTGGTACATTCTATTGTGTGCAAAACCATATTTCTCCTGCTATGCGGTGCGATTTCCATTAATCTTACAGGTCTTGGAATTTATTTCAAAGATAATAAATAAAAATTCTTATGCTCATGTGCCCATCTTTTGTGCCATATTCTAGTTCTCCTCCCTCGGATCGTTGGATGAAAAATGGATGGCCGAGTTTGCAGCATCACTATCATCAGGTTCTTCAGCTGATAAAACACCTCTTGGCCTTGGGGAACCACTAATAGTATGGCCTACTGTGGAAGATGTCAGATGCTCTCTGGAGGTACTACTGAATAGGTTATCATTTGAAACCTCTCTATGATGTTTTCTTCTTTCTTCCCCCTCCAATTTGTTTTTGTTAACTGTGATAATAGTACCTCACCCCTCACCCCACTAAATCCTTGCACGCCCAAATGCTAGCTCTGACAGACCCTCTGAAACTCAAACTCAGAACCTAGGATTGTTGCAAAATTCCAAACATTTACCATTACCAAGAAGGCTTGGGGGTTAAGTAACCCCTGTAAGAAAACCAGTAGTATGGACTGCACAAAAAACAGGACAACCCCGGGGAAATTCATCAAAACCTGCTTCTTTCCATGTTTCAAATATACTCTGATCGAAAATGAAAATTCATCCGAACAAAAATAAATCCAAATGGCAATAGTTTATTCACCCCTTTGAAACCTTAACTCACTTGCTGATTGAAAAAGAACTCGCCCAAGTGATTGAACTCCTTTGTTTTTGGGTATTTCTCAATATCACCAATTTGACCAAATCAATTTTTGAGCAAAATAAAATTTATCTTCAACCTCAAGATACTGACTGATCAGAGAATTTTCCAAGATACGAAATTGATAGCTCCAATTCTTTGCATCCATGCCATTCAAACATCCTTAACTGGATTTGTTTTCCAATCATCCAAAAACTCTTCCTATTATGAAAGATGAACGTAGAAGTGCCTCCATAAAGAAACACAGCTAATCAAGCCATACTGACAATATAATGAAGACATTTTTGTAGCTTTCTTATCAGACAATGTCCTCCCTCAATGAAAAGTATTAGAAAGAAAGCCCCTAAATGAAGATGGAACAAAAGCAGTTGTAAACATTTTCTTGTGGAGGAGAGAGCTAAATAGTGGAGATCAATGCCAAATCCCGCGATCATCATGAAAGCTAACACGAGGCCTCTCCCTTCTAGAACTATATTTATCCAGCAGCTTTTGAATGCATTTTCCCTGATAATTGGCTGATGACGCTTTATCTAGAATTCCAGCGTAATGATGCAAACAGACTCCTGTTTTCTTTGTTTTGTTTTTTATTTTTTGAAGCTGTCCAGTAAGTAACAAATTTGTATTTTTCCTCTGATTCCTTGGTCGAGCTAACTTGGATTACTAATGTGGCATATATCTCCAGACTTATTTTGGGAAGATGTACATTTTATAGCACAGTGTTCAGCTCACTCTTTGCTCAAACTACTTCATTTCCCTTTGATAGGGTTATGCTGCTGGAAACGCCATTCCCAGTCCATTAAAGAATGTGGATAAGGGATTTTTGAGAAAATATTGGGCGAAATGGAAATCATACCATAGTGGCCGATGGTTAGCATATCTTTCTTTATATCTATTATTAGTCTTAGACTCGCAAATTTTTAAATATTGTTTCAGCAAAAATATTCCTGATACTTCAGCTTCTTTTACAAAGCATTTTCTCATGATATTATCGAACACCAACTCAAAAAAACTAAATCATCTCGAGGCTGGCTTCCCGTCTCAGAAGAGTTTCTTCTCTATGCTATGAGGATTTTGATCAGAGCATTCATACTTTTCTGTGCTGCAGTCATGCAATGCCGCACATAAAGACATTTGCTCGTTATAATGGTCAGAAACTAGCGTAAGACTTCATACCAGACTAATTAATTCTCCTCTATTAATTGTTAATTTTTAGTGGAATTTTGGTGTAAATATGAAGACCTGAGACTTAAACGAGTTTATTGTTAACAGTTGGTTAGTGCTAACATCATCTAACCTCAGCAAAGCTGCCTGGGGAGCACTTCAGAAGAACAATTCTCAGCTAATGATTCGTTCTTACGAGGTATGTCTGAAATGTGAAAGATGGGTCTGATTGCACATTTCTAGATTTGCCTATCATCGTTTCTTTTACTAAGATGGGCATGTGGAGTTGACTCCATGATGGGTGAGTGTTCGTTGGTTAAGAATTCATTAAATCCTCCGTGATAGATAACCCAATGGATTCACTCATCTTATGGCCATCATTTCCGGAGGTTAAAATATTTGTCTTAAAAAAAAACATTACAGCTTGGGGTGCTCTTTCTACCTCAAAAAAGGCCTGATTACAGTTTTTCTTGTACCAAGAGTGGAGGTTCAGCACAGGTAATTCCAAAACCTGGTTCTTGAATAAGTACTTGGAATGCATACAAAATCTTCACAAGGGAAGAAATGAAACAGTGTTTTTTTTTTTCTTACTCAATTTACCTTTAGAACAAGTCAAGACCATCGGAAAACCTAGAAGAAAAAACAGAACTGGTGACATTGGCTTGGCAAGAAAACAAGAAAAGAGAATCGTTGTCTGAAGTAATTCAATTGCCTTTACCTTATGAACTCCCTCCTCAGCCATATGGCCCTCAAGGTCAGACAATACTCATTCCTTCATGGTTGCAACATACCTTATTTATTACATATTCTGACTTGTTTCAATCCTATCAGATGTTCCCTGGTCTTGGGATCGTAGGTATACCCAAAAGGATGTCCAAGGTGCGGTTTGGCCACGTCAAGTTCCACTTTATGCTTCCTAGGACTCTTGGTATCCTCTTTCCGACTGTTCTTTTTCATCTTATTATCCCTCTGGAAGTTTGTTGCACGAACTAATTTACATCACACTCATGCTTAGGGGAAAGGGTGGGAAAGTTGGAAGCAGGAAGAGTTGTTAATTATACAGTCGGCTTGATGATATTCTTGTATCAACTCCATGTATCCTAGTGAACAAATTTTTTTATGGAATTTTCTCCATATTAAAGAATATTTTGCTTC

mRNA sequence

ATGTATTCAATTTTGCAGTATTCCCCTTCTCCGTTCTGGCCCCTCTCCTTAAAGCATCGCCATCATCAGCTTATTTCACCTTTGCCTTCATCAAGCCCTTCTCCTCTCACTCTAAAACGGTCTCCCTTCTCGGCAATGGCTCGCCTCCAGGTTGGGTATTTGGTTCCACTTGATAAAAATCTAGAGGAAGGCAATTCGGAGCTAAAGATACCCCTCTCTCAGGGCCCAAATATCATCGGCCGTAGCAACGTTCTCGTTTCTGATAAGAGGATCAGCCGCAAGCATATCACTCTTACCACCTCCACTGACGGTTCTGCTAAACTATTTGTGGAAGGTGCAAATCCAGTTGTTATTAATTCTGGTGATGGTAGAAAGAAACTTGGTCCTCGTGAAAGTGTGATACTTCGGGACGGGGAGGTTATAGAATTGATTCCCGGCCATTATCTTTTCAAGTATGCAGCTCATTGTCCCAATACAAGGCCCGATTCTGAGGATTTGGGACAGAAGAGAGTTCGACAACTTGTGGACGATCAAATTTCTGAGGGAAAGGCTAAAAGAGTTGAAATGGGAGGCCCTTTGGAGAATCAACAAACTGGGATCTCGCAGTCGAAGAAAGATAATAGCGTGGAGGCCATTCGCAATTTTCATGTTCCCGACGACAAATTGCCCATGACTTTCAGACTTTTGAGTGTTAAAGGCCTGCCACCATGGGCTAATACATCATGTGTGAGGATTAGTGATGTTATACAGGGAGACATTCTCTTTGCCGTCCTGTCAAATTACATGGTGGATATGGATTGGTTAATACCTGCATGTCCCACTCTTGCAAAAGTCCCTCACGTGCTGGTTATTCATGGCGAGGGTGATGGAACACTGGATCATATGAAGAGGAAGAAGCCTGCAAATTGGATTTTGCACAAACCACCACTACCCATATCGTTTGGGACTCACCATTCAAAAGCAATATTTCTTGTCTATCCTCGAGGAATAAGAATGGTTGTACACACCGCAAATCTAATCTATGTTGATTGGAACAACAAAAGCCAAGGTTTGTGGATGCAAGATTTCCCTTGGAAAGATCAAAATTCCTCTACAAGAGGATGTGCATTTGAAGATGACTTGGTTGACTATCTTAGTGCTTTGAAGTGGCCAGAATTTCCTGCTAATTTTCCAGCACTTGGAAACTTCAATGTCAATCCATCGTTTTTCAGAAAGTTTGATTATAGTAATGCAGCGGTTAGATTGATCGCTTCTGTACCTGGATATCATACGGGTCGCCATTTAAAGAAGTGGGGCCATATGAAGCTACGTTCTGTTCTCCAGGAATGTGTTTTTGATAAAGAGTTTAAGCGATCTCCTCTTGTTTACCAGTTCTCCTCCCTCGGATCGTTGGATGAAAAATGGATGGCCGAGTTTGCAGCATCACTATCATCAGGTTCTTCAGCTGATAAAACACCTCTTGGCCTTGGGGAACCACTAATAGTATGGCCTACTGTGGAAGATGTCAGATGCTCTCTGGAGGGTTATGCTGCTGGAAACGCCATTCCCAGTCCATTAAAGAATGTGGATAAGGGATTTTTGAGAAAATATTGGGCGAAATGGAAATCATACCATAGTGGCCGATGTCATGCAATGCCGCACATAAAGACATTTGCTCGTTATAATGGTCAGAAACTAGCTTGGTTAGTGCTAACATCATCTAACCTCAGCAAAGCTGCCTGGGGAGCACTTCAGAAGAACAATTCTCAGCTAATGATTCGTTCTTACGAGCTTGGGGTGCTCTTTCTACCTCAAAAAAGGCCTGATTACAGTTTTTCTTGTACCAAGAGTGGAGGTTCAGCACAGAACAAGTCAAGACCATCGGAAAACCTAGAAGAAAAAACAGAACTGGTGACATTGGCTTGGCAAGAAAACAAGAAAAGAGAATCGTTGTCTGAAGTAATTCAATTGCCTTTACCTTATGAACTCCCTCCTCAGCCATATGGCCCTCAAGATGTTCCCTGGTCTTGGGATCGTAGGTATACCCAAAAGGATGTCCAAGGTGCGGTTTGGCCACGTCAAGTTCCACTTTATGCTTCCTAGGACTCTTGGGGAAAGGGTGGGAAAGTTGGAAGCAGGAAGAGTTGTTAATTATACAGTCGGCTTGATGATATTCTTGTATCAACTCCATGTATCCTAGTGAACAAATTTTTTTATGGAATTTTCTCCATATTAAAGAATATTTTGCTTC

Coding sequence (CDS)

ATGTATTCAATTTTGCAGTATTCCCCTTCTCCGTTCTGGCCCCTCTCCTTAAAGCATCGCCATCATCAGCTTATTTCACCTTTGCCTTCATCAAGCCCTTCTCCTCTCACTCTAAAACGGTCTCCCTTCTCGGCAATGGCTCGCCTCCAGGTTGGGTATTTGGTTCCACTTGATAAAAATCTAGAGGAAGGCAATTCGGAGCTAAAGATACCCCTCTCTCAGGGCCCAAATATCATCGGCCGTAGCAACGTTCTCGTTTCTGATAAGAGGATCAGCCGCAAGCATATCACTCTTACCACCTCCACTGACGGTTCTGCTAAACTATTTGTGGAAGGTGCAAATCCAGTTGTTATTAATTCTGGTGATGGTAGAAAGAAACTTGGTCCTCGTGAAAGTGTGATACTTCGGGACGGGGAGGTTATAGAATTGATTCCCGGCCATTATCTTTTCAAGTATGCAGCTCATTGTCCCAATACAAGGCCCGATTCTGAGGATTTGGGACAGAAGAGAGTTCGACAACTTGTGGACGATCAAATTTCTGAGGGAAAGGCTAAAAGAGTTGAAATGGGAGGCCCTTTGGAGAATCAACAAACTGGGATCTCGCAGTCGAAGAAAGATAATAGCGTGGAGGCCATTCGCAATTTTCATGTTCCCGACGACAAATTGCCCATGACTTTCAGACTTTTGAGTGTTAAAGGCCTGCCACCATGGGCTAATACATCATGTGTGAGGATTAGTGATGTTATACAGGGAGACATTCTCTTTGCCGTCCTGTCAAATTACATGGTGGATATGGATTGGTTAATACCTGCATGTCCCACTCTTGCAAAAGTCCCTCACGTGCTGGTTATTCATGGCGAGGGTGATGGAACACTGGATCATATGAAGAGGAAGAAGCCTGCAAATTGGATTTTGCACAAACCACCACTACCCATATCGTTTGGGACTCACCATTCAAAAGCAATATTTCTTGTCTATCCTCGAGGAATAAGAATGGTTGTACACACCGCAAATCTAATCTATGTTGATTGGAACAACAAAAGCCAAGGTTTGTGGATGCAAGATTTCCCTTGGAAAGATCAAAATTCCTCTACAAGAGGATGTGCATTTGAAGATGACTTGGTTGACTATCTTAGTGCTTTGAAGTGGCCAGAATTTCCTGCTAATTTTCCAGCACTTGGAAACTTCAATGTCAATCCATCGTTTTTCAGAAAGTTTGATTATAGTAATGCAGCGGTTAGATTGATCGCTTCTGTACCTGGATATCATACGGGTCGCCATTTAAAGAAGTGGGGCCATATGAAGCTACGTTCTGTTCTCCAGGAATGTGTTTTTGATAAAGAGTTTAAGCGATCTCCTCTTGTTTACCAGTTCTCCTCCCTCGGATCGTTGGATGAAAAATGGATGGCCGAGTTTGCAGCATCACTATCATCAGGTTCTTCAGCTGATAAAACACCTCTTGGCCTTGGGGAACCACTAATAGTATGGCCTACTGTGGAAGATGTCAGATGCTCTCTGGAGGGTTATGCTGCTGGAAACGCCATTCCCAGTCCATTAAAGAATGTGGATAAGGGATTTTTGAGAAAATATTGGGCGAAATGGAAATCATACCATAGTGGCCGATGTCATGCAATGCCGCACATAAAGACATTTGCTCGTTATAATGGTCAGAAACTAGCTTGGTTAGTGCTAACATCATCTAACCTCAGCAAAGCTGCCTGGGGAGCACTTCAGAAGAACAATTCTCAGCTAATGATTCGTTCTTACGAGCTTGGGGTGCTCTTTCTACCTCAAAAAAGGCCTGATTACAGTTTTTCTTGTACCAAGAGTGGAGGTTCAGCACAGAACAAGTCAAGACCATCGGAAAACCTAGAAGAAAAAACAGAACTGGTGACATTGGCTTGGCAAGAAAACAAGAAAAGAGAATCGTTGTCTGAAGTAATTCAATTGCCTTTACCTTATGAACTCCCTCCTCAGCCATATGGCCCTCAAGATGTTCCCTGGTCTTGGGATCGTAGGTATACCCAAAAGGATGTCCAAGGTGCGGTTTGGCCACGTCAAGTTCCACTTTATGCTTCCTAG

Protein sequence

MYSILQYSPSPFWPLSLKHRHHQLISPLPSSSPSPLTLKRSPFSAMARLQVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGSAKLFVEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSEDLGQKRVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMTFRLLSVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIHGEGDGTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWNNKSQGLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRKFDYSNAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLDEKWMAEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKGFLRKYWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLMIRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLSEVIQLPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS
Homology
[Close]
BLAST of CmaCh03G005220 vs. ExPASy Swiss-Prot
Match: Q8H1D9 (Tyrosyl-DNA phosphodiesterase 1 OS=Arabidopsis thaliana OX=3702 GN=TDP1 PE=1 SV=1)

HSP 1 Score: 844.0 bits (2179), Expect = 1.2e-243
Identity = 411/647 (63.52%), Postives = 490/647 (75.73%), Query Frame = 0 

Query: 46  MARLQVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGS 105
           MA  QV YL+PL  +L+E NS  +I LS+GPNIIGR NV + DKR+SRKHIT+  ST GS
Sbjct: 1   MAHSQVAYLIPLKADLKEDNSSPRITLSEGPNIIGRGNVSIVDKRLSRKHITIIVSTSGS 60

Query: 106 AKLFVEGANPVVI-NSGDG-RKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDS 165
           A L V+G NPVVI +SGDG RKK+ P E V + + ++IELIPGH+ FK            
Sbjct: 61  ASLSVDGTNPVVIRSSGDGERKKVKPSEEVSVCNDDLIELIPGHHFFKLV---------- 120

Query: 166 EDLGQKRVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLP 225
                                        L N +      K ++ VEAIR F  P++KLP
Sbjct: 121 -----------------------------LLNGRAAKKARKAEDDVEAIRRFCPPNEKLP 180

Query: 226 MTFRLLSVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLV 285
            TFRLLSV  LP WANTSCV I+DVI+GD++ A+LSNYMVD+DWL+ ACP LA +P V+V
Sbjct: 181 STFRLLSVDALPDWANTSCVSINDVIEGDVVAAILSNYMVDIDWLMSACPKLANIPQVMV 240

Query: 286 IHGEGDGTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVD 345
           IHGEGDG  ++++RKKPANWILHKP LPISFGTHHSKAIFLVYPRG+R+VVHTANLI+VD
Sbjct: 241 IHGEGDGRQEYIQRKKPANWILHKPRLPISFGTHHSKAIFLVYPRGVRVVVHTANLIHVD 300

Query: 346 WNNKSQGLWMQDFPWKDQNSS-TRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSF 405
           WNNKSQGLWMQDFPWKD +    +GC FE DL+DYL+ LKWPEF AN P  GN  +N +F
Sbjct: 301 WNNKSQGLWMQDFPWKDDDKDPPKGCGFEGDLIDYLNVLKWPEFTANLPGRGNVKINAAF 360

Query: 406 FRKFDYSNAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLG 465
           F+KFDYS+A VRLIASVPGYHTG +L KWGHMKLR++LQEC+FD+EF+RSPL+YQFSSLG
Sbjct: 361 FKKFDYSDATVRLIASVPGYHTGFNLNKWGHMKLRTILQECIFDREFRRSPLIYQFSSLG 420

Query: 466 SLDEKWMAEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNV 525
           SLDEKW+AEF  SLSSG + DKTPLG G+ LI+WPTVEDVRCSLEGYAAGNAIPSPLKNV
Sbjct: 421 SLDEKWLAEFGNSLSSGITEDKTPLGPGDSLIIWPTVEDVRCSLEGYAAGNAIPSPLKNV 480

Query: 526 DKGFLRKYWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNS 585
           +K FL+KYWA+WK+ HS R  AMPHIKTF RYN QK+AW +LTSSNLSKAAWGALQKNNS
Sbjct: 481 EKPFLKKYWARWKADHSARGRAMPHIKTFTRYNDQKIAWFLLTSSNLSKAAWGALQKNNS 540

Query: 586 QLMIRSYELGVLFLPQ--KRPDYSFSCTKSGGSAQN-KSRPSENLEEKTELVTLAWQENK 645
           QLMIRSYELGVLFLP   K     FSCT+S  S    K    + +E++++LVT+ WQ ++
Sbjct: 541 QLMIRSYELGVLFLPSPIKTQGCVFSCTESNPSVMKAKQETKDEVEKRSKLVTMTWQGDR 600

Query: 646 KRESLSEVIQLPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPR 687
               L E+I LP+PY+LPP+PY P+DVPWSWDR Y++KDV G VWPR
Sbjct: 601 ---DLPEIISLPVPYQLPPKPYSPEDVPWSWDRGYSKKDVYGQVWPR 605

[Close]
BLAST of CmaCh03G005220 vs. ExPASy Swiss-Prot
Match: Q9NUW8 (Tyrosyl-DNA phosphodiesterase 1 OS=Homo sapiens OX=9606 GN=TDP1 PE=1 SV=2)

HSP 1 Score: 287.3 bits (734), Expect = 4.5e-76
Identity = 184/527 (34.91%), Postives = 272/527 (51.61%), Query Frame = 0 

Query: 180 SEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMTFRLLSVKGLPPWAN 239
           ++G A+R E  G     +    + + + S E    + + D   P  F L  V G+ P  N
Sbjct: 120 NDGTAQRTENHGAPACHRLKEEEDEYETSGEGQDIWDMLDKGNPFQFYLTRVSGVKPKYN 179

Query: 240 TSCVRISDVIQ---GDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIHGEGDGTLDHM- 299
           +  + I D++    G ++ +   NY  D+DWL+   P   +   +L++HG+      H+ 
Sbjct: 180 SGALHIKDILSPLFGTLVSSAQFNYCFDVDWLVKQYPPEFRKKPILLVHGDKREAKAHLH 239

Query: 300 -KRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWNNKSQGLWMQ 359
            + K   N  L +  L I+FGTHH+K + L+Y  G+R+V+HT+NLI+ DW+ K+QG+W+ 
Sbjct: 240 AQAKPYENISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIHADWHQKTQGIWLS 299

Query: 360 -------DFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRKFD 419
                  D   K   S T    F+ DL+ YL A        N P+L  +        K D
Sbjct: 300 PLYPRIADGTHKSGESPTH---FKADLISYLMAY-------NAPSLKEW---IDVIHKHD 359

Query: 420 YSNAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRS-PLVYQFSSLGSL-- 479
            S   V LI S PG   G     WGH +L+ +L++         S P+V QFSS+GSL  
Sbjct: 360 LSETNVYLIGSTPGRFQGSQKDNWGHFRLKKLLKDHASSMPNAESWPVVGQFSSVGSLGA 419

Query: 480 -DEKWM-AEFAASLSSGSSADKTPLGLGEPL-IVWPTVEDVRCSLEGYAAGNAIPSPLKN 539
            + KW+ +EF  S+ +     KTP     PL +++P+VE+VR SLEGY AG ++P  ++ 
Sbjct: 420 DESKWLCSEFKESMLTLGKESKTPGKSSVPLYLIYPSVENVRTSLEGYPAGGSLPYSIQT 479

Query: 540 VDK-GFLRKYWAKWKSYHSGRCHAMPHIKTFARYNG--QKLAWLVLTSSNLSKAAWGALQ 599
            +K  +L  Y+ KW +  SGR +AMPHIKT+ R +    K+AW ++TS+NLSKAAWGAL+
Sbjct: 480 AEKQNWLHSYFHKWSAETSGRSNAMPHIKTYMRPSPDFSKIAWFLVTSANLSKAAWGALE 539

Query: 600 KNNSQLMIRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQEN 659
           KN +QLMIRSYELGVLFLP      SF   +   +                         
Sbjct: 540 KNGTQLMIRSYELGVLFLPSAFGLDSFKVKQKFFAG------------------------ 599

Query: 660 KKRESLSEVIQLPLPYELPPQPYGPQDVPWSWDRRYTQ-KDVQGAVW 685
               S   +   P+PY+LPP+ YG +D PW W+  Y +  D  G +W
Sbjct: 600 ----SQEPMATFPVPYDLPPELYGSKDRPWIWNIPYVKAPDTHGNMW 605

[Close]
BLAST of CmaCh03G005220 vs. ExPASy Swiss-Prot
Match: Q4G056 (Tyrosyl-DNA phosphodiesterase 1 OS=Rattus norvegicus OX=10116 GN=Tdp1 PE=1 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 5.8e-76
Identity = 187/520 (35.96%), Postives = 276/520 (53.08%), Query Frame = 0 

Query: 184 AKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMTFRLLSVKGLPPWANTSCV 243
           A++VE   P ++ +   +  + + S E    + + D + P  F L  V G+    N+  +
Sbjct: 125 AQKVEDRSPPDSHRAQRADEEYETSGEGQDIWDMLDKENPFQFYLTRVSGIKAKYNSKAL 184

Query: 244 RISDVIQ---GDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIHGE-GDGTLD-HMKRK 303
            I D++    G ++ +   NY  D++WLI   P   +   +L++HG+  +   D H + K
Sbjct: 185 HIKDILSPLFGTLVSSAQFNYCFDVNWLIKQYPPEFRKKPILLVHGDKREAKADLHAQAK 244

Query: 304 KPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWNNKSQGLWMQD-FP 363
             AN  L +  L I+FGTHH+K + L+Y  G+R+V+HT+NLI  DW+ K+QG+W+   +P
Sbjct: 245 PYANISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTSNLIREDWHQKTQGIWLSPLYP 304

Query: 364 WKDQNSSTRG---CAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRKFDYSNAAVR 423
              Q + T G     F+ DL  YL A        N P L  +       ++ D S   V 
Sbjct: 305 RIYQGNHTSGESSTHFKADLTSYLMAY-------NAPPLQEW---IDIIQEHDLSETNVY 364

Query: 424 LIASVPGYHTGRHLKKWGHMKLRSVLQ-ECVFDKEFKRSPLVYQFSSLGSL---DEKWM- 483
           LI S PG   G H   WGH +LR +LQ         +  P+V QFSS+GSL   + KW+ 
Sbjct: 365 LIGSTPGRFQGSHKDNWGHFRLRKLLQAHAPSAPRGECWPVVGQFSSIGSLGPDESKWLC 424

Query: 484 AEFAASLSSGSSADKTPLGLGEPL-IVWPTVEDVRCSLEGYAAGNAIPSPLKNVDK-GFL 543
           +EF  SL +     +TP     PL +++P+VE+VR SLEGY AG ++P  ++  +K  +L
Sbjct: 425 SEFKESLLAVREEGRTPGRSAVPLHLIYPSVENVRTSLEGYPAGGSLPYGIQTAEKQRWL 484

Query: 544 RKYWAKWKSYHSGRCHAMPHIKTFARYNG--QKLAWLVLTSSNLSKAAWGALQKNNSQLM 603
             Y+ KW +  SGR +AMPHIKT+ R +    KLAW ++TS+NLSKAAWGAL+KN +QLM
Sbjct: 485 HPYFHKWSAETSGRSNAMPHIKTYMRPSPDFSKLAWFLVTSANLSKAAWGALEKNGAQLM 544

Query: 604 IRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLS 663
           IRSYELGVLFLP      +F                        L T   ++     S  
Sbjct: 545 IRSYELGVLFLPS-----AFG-----------------------LDTFKVKQKFFSSSSE 604

Query: 664 EVIQLPLPYELPPQPYGPQDVPWSWDRRYTQ-KDVQGAVW 685
            +   P+PY+LPP+ YG +D PW W+  Y +  D  G +W
Sbjct: 605 PMASFPVPYDLPPELYGSKDRPWIWNIPYVKAPDTHGNMW 606

[Close]
BLAST of CmaCh03G005220 vs. ExPASy Swiss-Prot
Match: Q8BJ37 (Tyrosyl-DNA phosphodiesterase 1 OS=Mus musculus OX=10090 GN=Tdp1 PE=1 SV=2)

HSP 1 Score: 285.4 bits (729), Expect = 1.7e-75
Identity = 181/481 (37.63%), Postives = 258/481 (53.64%), Query Frame = 0 

Query: 223 PMTFRLLSVKGLPPWANTSCVRISDVIQ---GDILFAVLSNYMVDMDWLIPACPTLAKVP 282
           P  F L  V G+    N+  + I D++    G ++ +   NY  D+DWLI   P   +  
Sbjct: 164 PFQFYLTRVSGIKAKYNSKALHIKDILSPLFGTLVSSAQFNYCFDVDWLIKQYPPEFRKN 223

Query: 283 HVLVIHGE-GDGTLD-HMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTA 342
            +L++HG+  +   D H + K  AN  L +  L I+FGTHH+K + L+Y  G+R+V+HT+
Sbjct: 224 PILLVHGDKREAKADLHAQAKPYANISLCQAKLDIAFGTHHTKMMLLLYEEGLRVVIHTS 283

Query: 343 NLIYVDWNNKSQGLWMQD-FPWKDQNSSTRG---CAFEDDLVDYLSALKWPEFPANFPAL 402
           NLI  DW+ K+QG+W+   +P  DQ S T G     F+ DL  YL+A        N P L
Sbjct: 284 NLIREDWHQKTQGIWLSPLYPRIDQGSHTAGESSTRFKADLTSYLTAY-------NAPPL 343

Query: 403 GNFNVNPSFFRKFDYSNAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQ-ECVFDKEFKRS 462
             +       ++ D S   V LI S PG   G H   WGH +LR +LQ       + +  
Sbjct: 344 QEW---IDIIQEHDLSETNVYLIGSTPGRFQGSHRDNWGHFRLRKLLQAHAPSTPKGECW 403

Query: 463 PLVYQFSSLGSL---DEKWM-AEFAASLSSGSSADKTPLGLGEPL-IVWPTVEDVRCSLE 522
           P+V QFSS+GSL   + KW+ +EF  SL +     + P     PL +++P+VE+VR SLE
Sbjct: 404 PIVGQFSSIGSLGPDESKWLCSEFKDSLLALREEGRPPGKSAVPLHLIYPSVENVRTSLE 463

Query: 523 GYAAGNAIPSPLKNVDK-GFLRKYWAKWKSYHSGRCHAMPHIKTFARYNG--QKLAWLVL 582
           GY AG ++P  ++  +K  +L  Y+ KW +  SGR +AMPHIKT+ R +    KLAW ++
Sbjct: 464 GYPAGGSLPYSIQTAEKQRWLHSYFHKWSAETSGRSNAMPHIKTYMRPSPDFSKLAWFLV 523

Query: 583 TSSNLSKAAWGALQKNNSQLMIRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENL 642
           TS+NLSKAAWGAL+KN +QLMIRSYELGVLFLP      +F                   
Sbjct: 524 TSANLSKAAWGALEKNGTQLMIRSYELGVLFLPS-----AFG------------------ 583

Query: 643 EEKTELVTLAWQENKKRESLSEVIQLPLPYELPPQPYGPQDVPWSWDRRYTQ-KDVQGAV 685
                L T   ++     S       P+PY+LPP+ Y  +D PW W+  Y +  D  G +
Sbjct: 584 -----LDTFKVKQKFFSSSCEPTASFPVPYDLPPELYRSKDRPWIWNIPYVKAPDTHGNM 606

[Close]
BLAST of CmaCh03G005220 vs. ExPASy Swiss-Prot
Match: Q9TXV7 (Probable tyrosyl-DNA phosphodiesterase OS=Caenorhabditis elegans OX=6239 GN=F52C12.1 PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 5.5e-42
Identity = 136/418 (32.54%), Postives = 210/418 (50.24%), Query Frame = 0 

Query: 236 PWANTSCVRISDVIQGDI--LFAVLSNYMVDMDWLIPAC-PTLAKVPHVLVIHGEGDGTL 295
           P   +   R  D I  DI  + ++  ++M+D ++LI +  P+L + P  LV+ G  D   
Sbjct: 47  PRQESESSRSLDEILADIRPINSLHFSFMLDFEFLIGSYPPSLREYPITLVV-GAPDAP- 106

Query: 296 DHMKRKKPANWI-LHKPPLPISFGTHHSKAIFLVYPRG-IRMVVHTANLIYVDWNNKSQG 355
           D +K  K    + +    LPI FGTHH+K   L    G   ++V TANL+  DW  K+Q 
Sbjct: 107 DLLKCTKNQKLVTVVGASLPIPFGTHHTKMSILEDEDGRFHVIVSTANLVPDDWEFKTQQ 166

Query: 356 LWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRKFDYSN 415
            +  +F  K  + +     F+DDL++YLS  +              +      +K D+S 
Sbjct: 167 FY-YNFGVKIASGTVPRSDFQDDLLEYLSMYR-----------NQLDTWKQLLQKVDFSQ 226

Query: 416 AAVRLIASVPGYHTGRHLKKWGHMKLRSVLQE-CVFDKEF---KRSPLVYQFSSLGSLDE 475
            + RLI S PGYHT    ++ GH +L  +L E   FD  +   +R   V Q SS+GSL  
Sbjct: 227 ISDRLIFSTPGYHTDPPTQRPGHPRLFRILSEKFPFDASYEHTERCTFVAQCSSIGSLGS 286

Query: 476 ---KWM-AEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIP-SPLKN 535
               W   +F  SL   + + K      +  +V+P+VEDVR S +GYA G ++P     +
Sbjct: 287 APINWFRGQFLQSLEGANPSPKQK--PAKMYLVFPSVEDVRTSCQGYAGGCSVPYRNSVH 346

Query: 536 VDKGFLRKYWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGAL---- 595
             + +L+    KW+S    R +A+PH KT+ +Y+ +   W +LTS+NLSKAAWG +    
Sbjct: 347 ARQKWLQGNMCKWRSNAKRRTNAVPHCKTYVKYDKKVAIWQLLTSANLSKAAWGEVSFNK 406

Query: 596 QKNNSQLMIRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAW 636
            KN  QLMIRS+E+GVL     R +  F       SA ++   ++   EK +++   W
Sbjct: 407 SKNVEQLMIRSWEMGVLITDPSRFNIPFDYPLVPYSATDEPFVTDKKHEKPDILGCIW 448

[Close]
BLAST of CmaCh03G005220 vs. ExPASy TrEMBL
Match: A0A6J1ILM7 (tyrosyl-DNA phosphodiesterase 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478138 PE=3 SV=1)

HSP 1 Score: 1344.3 bits (3478), Expect = 0.0e+00
Identity = 648/648 (100.00%), Postives = 648/648 (100.00%), Query Frame = 0 

Query: 46  MARLQVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGS 105
           MARLQVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGS
Sbjct: 1   MARLQVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGS 60

Query: 106 AKLFVEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSED 165
           AKLFVEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSED
Sbjct: 61  AKLFVEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSED 120

Query: 166 LGQKRVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMT 225
           LGQKRVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMT
Sbjct: 121 LGQKRVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMT 180

Query: 226 FRLLSVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIH 285
           FRLLSVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIH
Sbjct: 181 FRLLSVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIH 240

Query: 286 GEGDGTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWN 345
           GEGDGTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWN
Sbjct: 241 GEGDGTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWN 300

Query: 346 NKSQGLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRK 405
           NKSQGLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRK
Sbjct: 301 NKSQGLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRK 360

Query: 406 FDYSNAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLD 465
           FDYSNAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLD
Sbjct: 361 FDYSNAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLD 420

Query: 466 EKWMAEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKG 525
           EKWMAEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKG
Sbjct: 421 EKWMAEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKG 480

Query: 526 FLRKYWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLM 585
           FLRKYWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLM
Sbjct: 481 FLRKYWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLM 540

Query: 586 IRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLS 645
           IRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLS
Sbjct: 541 IRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLS 600

Query: 646 EVIQLPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS 694
           EVIQLPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS
Sbjct: 601 EVIQLPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS 648

[Close]
BLAST of CmaCh03G005220 vs. ExPASy TrEMBL
Match: A0A6J1INX7 (tyrosyl-DNA phosphodiesterase 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478138 PE=3 SV=1)

HSP 1 Score: 1335.9 bits (3456), Expect = 0.0e+00
Identity = 643/644 (99.84%), Postives = 644/644 (100.00%), Query Frame = 0 

Query: 50  QVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGSAKLF 109
           +VGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGSAKLF
Sbjct: 7   KVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGSAKLF 66

Query: 110 VEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSEDLGQK 169
           VEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSEDLGQK
Sbjct: 67  VEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSEDLGQK 126

Query: 170 RVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMTFRLL 229
           RVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMTFRLL
Sbjct: 127 RVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMTFRLL 186

Query: 230 SVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIHGEGD 289
           SVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIHGEGD
Sbjct: 187 SVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIHGEGD 246

Query: 290 GTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWNNKSQ 349
           GTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWNNKSQ
Sbjct: 247 GTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWNNKSQ 306

Query: 350 GLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRKFDYS 409
           GLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRKFDYS
Sbjct: 307 GLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRKFDYS 366

Query: 410 NAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLDEKWM 469
           NAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLDEKWM
Sbjct: 367 NAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLDEKWM 426

Query: 470 AEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKGFLRK 529
           AEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKGFLRK
Sbjct: 427 AEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKGFLRK 486

Query: 530 YWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLMIRSY 589
           YWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLMIRSY
Sbjct: 487 YWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLMIRSY 546

Query: 590 ELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLSEVIQ 649
           ELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLSEVIQ
Sbjct: 547 ELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLSEVIQ 606

Query: 650 LPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS 694
           LPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS
Sbjct: 607 LPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS 650

[Close]
BLAST of CmaCh03G005220 vs. ExPASy TrEMBL
Match: A0A6J1GE46 (tyrosyl-DNA phosphodiesterase 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453353 PE=3 SV=1)

HSP 1 Score: 1316.2 bits (3405), Expect = 0.0e+00
Identity = 634/648 (97.84%), Postives = 640/648 (98.77%), Query Frame = 0 

Query: 46  MARLQVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGS 105
           MARLQVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGS
Sbjct: 1   MARLQVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGS 60

Query: 106 AKLFVEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSED 165
           AKL VEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSED
Sbjct: 61  AKLLVEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSED 120

Query: 166 LGQKRVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMT 225
           LGQKRVR+LVDD ISE KAKRVEMGG LENQQTGISQSKKDNSVEAIRNFHVPDDKLPMT
Sbjct: 121 LGQKRVRKLVDDTISERKAKRVEMGGTLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMT 180

Query: 226 FRLLSVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIH 285
           FRLLSVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVD+DWLIPACPTLAKVPHVLV H
Sbjct: 181 FRLLSVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDIDWLIPACPTLAKVPHVLVFH 240

Query: 286 GEGDGTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWN 345
           GEGDGTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIR+VVHTANLIYVDWN
Sbjct: 241 GEGDGTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRIVVHTANLIYVDWN 300

Query: 346 NKSQGLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRK 405
           NKSQGLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFN+NPSFFRK
Sbjct: 301 NKSQGLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNINPSFFRK 360

Query: 406 FDYSNAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLD 465
           FDYSNAAVRLIASVPGYHTGRHLKKWGHMKLR VLQECVFDKEFKRSPLVYQFSSLGSLD
Sbjct: 361 FDYSNAAVRLIASVPGYHTGRHLKKWGHMKLRYVLQECVFDKEFKRSPLVYQFSSLGSLD 420

Query: 466 EKWMAEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKG 525
           EKWMAEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNV+KG
Sbjct: 421 EKWMAEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVEKG 480

Query: 526 FLRKYWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLM 585
           FLRKYWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLM
Sbjct: 481 FLRKYWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLM 540

Query: 586 IRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLS 645
           IRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQEN+K ESLS
Sbjct: 541 IRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENRKGESLS 600

Query: 646 EVIQLPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS 694
           EVIQLPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQV LYAS
Sbjct: 601 EVIQLPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVQLYAS 648

[Close]
BLAST of CmaCh03G005220 vs. ExPASy TrEMBL
Match: A0A6J1IK17 (tyrosyl-DNA phosphodiesterase 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111478138 PE=3 SV=1)

HSP 1 Score: 1308.5 bits (3385), Expect = 0.0e+00
Identity = 633/644 (98.29%), Postives = 634/644 (98.45%), Query Frame = 0 

Query: 50  QVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGSAKLF 109
           +VGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGSAKLF
Sbjct: 7   KVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGSAKLF 66

Query: 110 VEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSEDLGQK 169
           VEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSEDLGQK
Sbjct: 67  VEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSEDLGQK 126

Query: 170 RVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMTFRLL 229
           RVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMTFRLL
Sbjct: 127 RVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMTFRLL 186

Query: 230 SVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIHGEGD 289
           SVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIHGEGD
Sbjct: 187 SVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIHGEGD 246

Query: 290 GTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWNNKSQ 349
           GTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWNNKSQ
Sbjct: 247 GTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWNNKSQ 306

Query: 350 GLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRKFDYS 409
           GLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRKFDYS
Sbjct: 307 GLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRKFDYS 366

Query: 410 NAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLDEKWM 469
           NAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLDEKWM
Sbjct: 367 NAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLDEKWM 426

Query: 470 AEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKGFLRK 529
           AEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKGFLRK
Sbjct: 427 AEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKGFLRK 486

Query: 530 YWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLMIRSY 589
           YWAKWKSYHSGRCHAMPHIKTFARYNGQKLA          KAAWGALQKNNSQLMIRSY
Sbjct: 487 YWAKWKSYHSGRCHAMPHIKTFARYNGQKLA----------KAAWGALQKNNSQLMIRSY 546

Query: 590 ELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLSEVIQ 649
           ELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLSEVIQ
Sbjct: 547 ELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLSEVIQ 606

Query: 650 LPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS 694
           LPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS
Sbjct: 607 LPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS 640

[Close]
BLAST of CmaCh03G005220 vs. ExPASy TrEMBL
Match: A0A6J1GF28 (tyrosyl-DNA phosphodiesterase 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453353 PE=3 SV=1)

HSP 1 Score: 1307.7 bits (3383), Expect = 0.0e+00
Identity = 629/644 (97.67%), Postives = 636/644 (98.76%), Query Frame = 0 

Query: 50  QVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGSAKLF 109
           +VGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGSAKL 
Sbjct: 7   KVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGSAKLL 66

Query: 110 VEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSEDLGQK 169
           VEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSEDLGQK
Sbjct: 67  VEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSEDLGQK 126

Query: 170 RVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMTFRLL 229
           RVR+LVDD ISE KAKRVEMGG LENQQTGISQSKKDNSVEAIRNFHVPDDKLPMTFRLL
Sbjct: 127 RVRKLVDDTISERKAKRVEMGGTLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMTFRLL 186

Query: 230 SVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIHGEGD 289
           SVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVD+DWLIPACPTLAKVPHVLV HGEGD
Sbjct: 187 SVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDIDWLIPACPTLAKVPHVLVFHGEGD 246

Query: 290 GTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWNNKSQ 349
           GTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIR+VVHTANLIYVDWNNKSQ
Sbjct: 247 GTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRIVVHTANLIYVDWNNKSQ 306

Query: 350 GLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRKFDYS 409
           GLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFN+NPSFFRKFDYS
Sbjct: 307 GLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNINPSFFRKFDYS 366

Query: 410 NAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLDEKWM 469
           NAAVRLIASVPGYHTGRHLKKWGHMKLR VLQECVFDKEFKRSPLVYQFSSLGSLDEKWM
Sbjct: 367 NAAVRLIASVPGYHTGRHLKKWGHMKLRYVLQECVFDKEFKRSPLVYQFSSLGSLDEKWM 426

Query: 470 AEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKGFLRK 529
           AEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNV+KGFLRK
Sbjct: 427 AEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVEKGFLRK 486

Query: 530 YWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLMIRSY 589
           YWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLMIRSY
Sbjct: 487 YWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLMIRSY 546

Query: 590 ELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLSEVIQ 649
           ELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQEN+K ESLSEVIQ
Sbjct: 547 ELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENRKGESLSEVIQ 606

Query: 650 LPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS 694
           LPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQV LYAS
Sbjct: 607 LPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVQLYAS 650

[Close]
BLAST of CmaCh03G005220 vs. NCBI nr
Match: XP_022978031.1 (tyrosyl-DNA phosphodiesterase 1 isoform X2 [Cucurbita maxima])

HSP 1 Score: 1344.3 bits (3478), Expect = 0.0e+00
Identity = 648/648 (100.00%), Postives = 648/648 (100.00%), Query Frame = 0 

Query: 46  MARLQVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGS 105
           MARLQVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGS
Sbjct: 1   MARLQVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGS 60

Query: 106 AKLFVEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSED 165
           AKLFVEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSED
Sbjct: 61  AKLFVEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSED 120

Query: 166 LGQKRVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMT 225
           LGQKRVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMT
Sbjct: 121 LGQKRVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMT 180

Query: 226 FRLLSVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIH 285
           FRLLSVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIH
Sbjct: 181 FRLLSVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIH 240

Query: 286 GEGDGTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWN 345
           GEGDGTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWN
Sbjct: 241 GEGDGTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWN 300

Query: 346 NKSQGLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRK 405
           NKSQGLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRK
Sbjct: 301 NKSQGLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRK 360

Query: 406 FDYSNAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLD 465
           FDYSNAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLD
Sbjct: 361 FDYSNAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLD 420

Query: 466 EKWMAEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKG 525
           EKWMAEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKG
Sbjct: 421 EKWMAEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKG 480

Query: 526 FLRKYWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLM 585
           FLRKYWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLM
Sbjct: 481 FLRKYWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLM 540

Query: 586 IRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLS 645
           IRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLS
Sbjct: 541 IRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLS 600

Query: 646 EVIQLPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS 694
           EVIQLPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS
Sbjct: 601 EVIQLPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS 648

[Close]
BLAST of CmaCh03G005220 vs. NCBI nr
Match: XP_022978029.1 (tyrosyl-DNA phosphodiesterase 1 isoform X1 [Cucurbita maxima] >XP_022978030.1 tyrosyl-DNA phosphodiesterase 1 isoform X1 [Cucurbita maxima])

HSP 1 Score: 1335.9 bits (3456), Expect = 0.0e+00
Identity = 643/644 (99.84%), Postives = 644/644 (100.00%), Query Frame = 0 

Query: 50  QVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGSAKLF 109
           +VGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGSAKLF
Sbjct: 7   KVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGSAKLF 66

Query: 110 VEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSEDLGQK 169
           VEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSEDLGQK
Sbjct: 67  VEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSEDLGQK 126

Query: 170 RVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMTFRLL 229
           RVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMTFRLL
Sbjct: 127 RVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMTFRLL 186

Query: 230 SVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIHGEGD 289
           SVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIHGEGD
Sbjct: 187 SVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIHGEGD 246

Query: 290 GTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWNNKSQ 349
           GTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWNNKSQ
Sbjct: 247 GTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWNNKSQ 306

Query: 350 GLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRKFDYS 409
           GLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRKFDYS
Sbjct: 307 GLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRKFDYS 366

Query: 410 NAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLDEKWM 469
           NAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLDEKWM
Sbjct: 367 NAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLDEKWM 426

Query: 470 AEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKGFLRK 529
           AEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKGFLRK
Sbjct: 427 AEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKGFLRK 486

Query: 530 YWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLMIRSY 589
           YWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLMIRSY
Sbjct: 487 YWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLMIRSY 546

Query: 590 ELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLSEVIQ 649
           ELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLSEVIQ
Sbjct: 547 ELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLSEVIQ 606

Query: 650 LPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS 694
           LPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS
Sbjct: 607 LPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS 650

[Close]
BLAST of CmaCh03G005220 vs. NCBI nr
Match: XP_023544484.1 (tyrosyl-DNA phosphodiesterase 1 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1322.8 bits (3422), Expect = 0.0e+00
Identity = 636/648 (98.15%), Postives = 642/648 (99.07%), Query Frame = 0 

Query: 46  MARLQVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGS 105
           MAR QVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGS
Sbjct: 1   MARFQVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGS 60

Query: 106 AKLFVEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSED 165
           AKL VEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSED
Sbjct: 61  AKLLVEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSED 120

Query: 166 LGQKRVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMT 225
           LGQKRVR+LVDD ISE KAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMT
Sbjct: 121 LGQKRVRKLVDDTISERKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMT 180

Query: 226 FRLLSVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIH 285
           FRLLSVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVD+DWLIPACPTLAKVPHVLV H
Sbjct: 181 FRLLSVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDIDWLIPACPTLAKVPHVLVFH 240

Query: 286 GEGDGTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWN 345
           GEGDGTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIR+VVHTANLIYVDWN
Sbjct: 241 GEGDGTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRIVVHTANLIYVDWN 300

Query: 346 NKSQGLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRK 405
           NKSQGLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFN+NPSFFRK
Sbjct: 301 NKSQGLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNINPSFFRK 360

Query: 406 FDYSNAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLD 465
           FDYSNAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLD
Sbjct: 361 FDYSNAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLD 420

Query: 466 EKWMAEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKG 525
           EKWMAEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNV+KG
Sbjct: 421 EKWMAEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVEKG 480

Query: 526 FLRKYWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLM 585
           FLRKYWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLM
Sbjct: 481 FLRKYWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLM 540

Query: 586 IRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLS 645
           IRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQEN+KRESLS
Sbjct: 541 IRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENRKRESLS 600

Query: 646 EVIQLPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS 694
           EVIQLPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQV LYAS
Sbjct: 601 EVIQLPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVQLYAS 648

[Close]
BLAST of CmaCh03G005220 vs. NCBI nr
Match: XP_022950186.1 (tyrosyl-DNA phosphodiesterase 1 isoform X2 [Cucurbita moschata] >KAG7033930.1 Tyrosyl-DNA phosphodiesterase 1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 1316.2 bits (3405), Expect = 0.0e+00
Identity = 634/648 (97.84%), Postives = 640/648 (98.77%), Query Frame = 0 

Query: 46  MARLQVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGS 105
           MARLQVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGS
Sbjct: 1   MARLQVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGS 60

Query: 106 AKLFVEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSED 165
           AKL VEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSED
Sbjct: 61  AKLLVEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSED 120

Query: 166 LGQKRVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMT 225
           LGQKRVR+LVDD ISE KAKRVEMGG LENQQTGISQSKKDNSVEAIRNFHVPDDKLPMT
Sbjct: 121 LGQKRVRKLVDDTISERKAKRVEMGGTLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMT 180

Query: 226 FRLLSVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIH 285
           FRLLSVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVD+DWLIPACPTLAKVPHVLV H
Sbjct: 181 FRLLSVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDIDWLIPACPTLAKVPHVLVFH 240

Query: 286 GEGDGTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWN 345
           GEGDGTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIR+VVHTANLIYVDWN
Sbjct: 241 GEGDGTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRIVVHTANLIYVDWN 300

Query: 346 NKSQGLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRK 405
           NKSQGLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFN+NPSFFRK
Sbjct: 301 NKSQGLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNINPSFFRK 360

Query: 406 FDYSNAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLD 465
           FDYSNAAVRLIASVPGYHTGRHLKKWGHMKLR VLQECVFDKEFKRSPLVYQFSSLGSLD
Sbjct: 361 FDYSNAAVRLIASVPGYHTGRHLKKWGHMKLRYVLQECVFDKEFKRSPLVYQFSSLGSLD 420

Query: 466 EKWMAEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKG 525
           EKWMAEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNV+KG
Sbjct: 421 EKWMAEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVEKG 480

Query: 526 FLRKYWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLM 585
           FLRKYWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLM
Sbjct: 481 FLRKYWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLM 540

Query: 586 IRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLS 645
           IRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQEN+K ESLS
Sbjct: 541 IRSYELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENRKGESLS 600

Query: 646 EVIQLPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS 694
           EVIQLPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQV LYAS
Sbjct: 601 EVIQLPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVQLYAS 648

[Close]
BLAST of CmaCh03G005220 vs. NCBI nr
Match: XP_023544483.1 (tyrosyl-DNA phosphodiesterase 1 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1315.8 bits (3404), Expect = 0.0e+00
Identity = 632/644 (98.14%), Postives = 639/644 (99.22%), Query Frame = 0 

Query: 50  QVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGSAKLF 109
           +VGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGSAKL 
Sbjct: 7   KVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGSAKLL 66

Query: 110 VEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSEDLGQK 169
           VEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSEDLGQK
Sbjct: 67  VEGANPVVINSGDGRKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDSEDLGQK 126

Query: 170 RVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMTFRLL 229
           RVR+LVDD ISE KAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMTFRLL
Sbjct: 127 RVRKLVDDTISERKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLPMTFRLL 186

Query: 230 SVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLVIHGEGD 289
           SVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVD+DWLIPACPTLAKVPHVLV HGEGD
Sbjct: 187 SVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDIDWLIPACPTLAKVPHVLVFHGEGD 246

Query: 290 GTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVDWNNKSQ 349
           GTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIR+VVHTANLIYVDWNNKSQ
Sbjct: 247 GTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRIVVHTANLIYVDWNNKSQ 306

Query: 350 GLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSFFRKFDYS 409
           GLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFN+NPSFFRKFDYS
Sbjct: 307 GLWMQDFPWKDQNSSTRGCAFEDDLVDYLSALKWPEFPANFPALGNFNINPSFFRKFDYS 366

Query: 410 NAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLDEKWM 469
           NAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLDEKWM
Sbjct: 367 NAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLGSLDEKWM 426

Query: 470 AEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVDKGFLRK 529
           AEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNV+KGFLRK
Sbjct: 427 AEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNVEKGFLRK 486

Query: 530 YWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLMIRSY 589
           YWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLMIRSY
Sbjct: 487 YWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNSQLMIRSY 546

Query: 590 ELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENKKRESLSEVIQ 649
           ELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQEN+KRESLSEVIQ
Sbjct: 547 ELGVLFLPQKRPDYSFSCTKSGGSAQNKSRPSENLEEKTELVTLAWQENRKRESLSEVIQ 606

Query: 650 LPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVPLYAS 694
           LPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQV LYAS
Sbjct: 607 LPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPRQVQLYAS 650

[Close]
BLAST of CmaCh03G005220 vs. TAIR 10
Match: AT5G15170.1 (tyrosyl-DNA phosphodiesterase-related )

HSP 1 Score: 844.0 bits (2179), Expect = 8.8e-245
Identity = 411/647 (63.52%), Postives = 490/647 (75.73%), Query Frame = 0 

Query: 46  MARLQVGYLVPLDKNLEEGNSELKIPLSQGPNIIGRSNVLVSDKRISRKHITLTTSTDGS 105
           MA  QV YL+PL  +L+E NS  +I LS+GPNIIGR NV + DKR+SRKHIT+  ST GS
Sbjct: 1   MAHSQVAYLIPLKADLKEDNSSPRITLSEGPNIIGRGNVSIVDKRLSRKHITIIVSTSGS 60

Query: 106 AKLFVEGANPVVI-NSGDG-RKKLGPRESVILRDGEVIELIPGHYLFKYAAHCPNTRPDS 165
           A L V+G NPVVI +SGDG RKK+ P E V + + ++IELIPGH+ FK            
Sbjct: 61  ASLSVDGTNPVVIRSSGDGERKKVKPSEEVSVCNDDLIELIPGHHFFKLV---------- 120

Query: 166 EDLGQKRVRQLVDDQISEGKAKRVEMGGPLENQQTGISQSKKDNSVEAIRNFHVPDDKLP 225
                                        L N +      K ++ VEAIR F  P++KLP
Sbjct: 121 -----------------------------LLNGRAAKKARKAEDDVEAIRRFCPPNEKLP 180

Query: 226 MTFRLLSVKGLPPWANTSCVRISDVIQGDILFAVLSNYMVDMDWLIPACPTLAKVPHVLV 285
            TFRLLSV  LP WANTSCV I+DVI+GD++ A+LSNYMVD+DWL+ ACP LA +P V+V
Sbjct: 181 STFRLLSVDALPDWANTSCVSINDVIEGDVVAAILSNYMVDIDWLMSACPKLANIPQVMV 240

Query: 286 IHGEGDGTLDHMKRKKPANWILHKPPLPISFGTHHSKAIFLVYPRGIRMVVHTANLIYVD 345
           IHGEGDG  ++++RKKPANWILHKP LPISFGTHHSKAIFLVYPRG+R+VVHTANLI+VD
Sbjct: 241 IHGEGDGRQEYIQRKKPANWILHKPRLPISFGTHHSKAIFLVYPRGVRVVVHTANLIHVD 300

Query: 346 WNNKSQGLWMQDFPWKDQNSS-TRGCAFEDDLVDYLSALKWPEFPANFPALGNFNVNPSF 405
           WNNKSQGLWMQDFPWKD +    +GC FE DL+DYL+ LKWPEF AN P  GN  +N +F
Sbjct: 301 WNNKSQGLWMQDFPWKDDDKDPPKGCGFEGDLIDYLNVLKWPEFTANLPGRGNVKINAAF 360

Query: 406 FRKFDYSNAAVRLIASVPGYHTGRHLKKWGHMKLRSVLQECVFDKEFKRSPLVYQFSSLG 465
           F+KFDYS+A VRLIASVPGYHTG +L KWGHMKLR++LQEC+FD+EF+RSPL+YQFSSLG
Sbjct: 361 FKKFDYSDATVRLIASVPGYHTGFNLNKWGHMKLRTILQECIFDREFRRSPLIYQFSSLG 420

Query: 466 SLDEKWMAEFAASLSSGSSADKTPLGLGEPLIVWPTVEDVRCSLEGYAAGNAIPSPLKNV 525
           SLDEKW+AEF  SLSSG + DKTPLG G+ LI+WPTVEDVRCSLEGYAAGNAIPSPLKNV
Sbjct: 421 SLDEKWLAEFGNSLSSGITEDKTPLGPGDSLIIWPTVEDVRCSLEGYAAGNAIPSPLKNV 480

Query: 526 DKGFLRKYWAKWKSYHSGRCHAMPHIKTFARYNGQKLAWLVLTSSNLSKAAWGALQKNNS 585
           +K FL+KYWA+WK+ HS R  AMPHIKTF RYN QK+AW +LTSSNLSKAAWGALQKNNS
Sbjct: 481 EKPFLKKYWARWKADHSARGRAMPHIKTFTRYNDQKIAWFLLTSSNLSKAAWGALQKNNS 540

Query: 586 QLMIRSYELGVLFLPQ--KRPDYSFSCTKSGGSAQN-KSRPSENLEEKTELVTLAWQENK 645
           QLMIRSYELGVLFLP   K     FSCT+S  S    K    + +E++++LVT+ WQ ++
Sbjct: 541 QLMIRSYELGVLFLPSPIKTQGCVFSCTESNPSVMKAKQETKDEVEKRSKLVTMTWQGDR 600

Query: 646 KRESLSEVIQLPLPYELPPQPYGPQDVPWSWDRRYTQKDVQGAVWPR 687
               L E+I LP+PY+LPP+PY P+DVPWSWDR Y++KDV G VWPR
Sbjct: 601 ---DLPEIISLPVPYQLPPKPYSPEDVPWSWDRGYSKKDVYGQVWPR 605

[Close]
BLAST of CmaCh03G005220 vs. TAIR 10
Match: AT5G07400.1 (forkhead-associated domain-containing protein / FHA domain-containing protein )

HSP 1 Score: 58.2 bits (139), Expect = 3.1e-08
Identity = 52/195 (26.67%), Postives = 79/195 (40.51%), Query Frame = 0 

Query: 258 LSNYMVDMDWLIPACPTLAKVPHVLVIH------GEGDGTLDHMKRKKPANWILHKPPLP 317
           L+ +  D+ W +  C T   +P  +  H               +      N  +  PP P
Sbjct: 402 LATFTSDILWFLTCCDTPRHLPVTIACHNAERCWSSNPDARTAVPLPNYPNVTMVYPPFP 461

Query: 318 --ISFG---------THHSKAIFLVYPRGIRMVVHTANLIYVDWNNKSQGLWMQDFPWK- 377
             I+FG          HH K   L     IR+++ +ANL+   WN+ +  +W QDFP + 
Sbjct: 462 EEIAFGKDRTNRGIACHHPKLFILQRKDSIRVIITSANLVARQWNDVTNTVWWQDFPRRA 521

Query: 378 --DQNSSTRGCAFEDDLVDYLSALKWPEFPANFP--ALGNFNVNPS------FFRKFDYS 425
             D  S    C  E +       LK P+F A     A       PS       F K+++ 
Sbjct: 522 DPDLLSLFGHCQRETN-----HGLK-PDFCAQLAGFAASLLTDVPSQAHWILEFTKYNFE 581

The following BLAST results are available for this feature:
BLAST of CmaCh03G005220 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8H1D91.2e-24363.52Tyrosyl-DNA phosphodiesterase 1 OS=Arabidopsis thaliana OX=3702 GN=TDP1 PE=1 SV=... [more]
Q9NUW84.5e-7634.91Tyrosyl-DNA phosphodiesterase 1 OS=Homo sapiens OX=9606 GN=TDP1 PE=1 SV=2[more]
Q4G0565.8e-7635.96Tyrosyl-DNA phosphodiesterase 1 OS=Rattus norvegicus OX=10116 GN=Tdp1 PE=1 SV=1[more]
Q8BJ371.7e-7537.63Tyrosyl-DNA phosphodiesterase 1 OS=Mus musculus OX=10090 GN=Tdp1 PE=1 SV=2[more]
Q9TXV75.5e-4232.54Probable tyrosyl-DNA phosphodiesterase OS=Caenorhabditis elegans OX=6239 GN=F52C... [more]
BLAST of CmaCh03G005220 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ILM70.0e+00100.00tyrosyl-DNA phosphodiesterase 1 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1INX70.0e+0099.84tyrosyl-DNA phosphodiesterase 1 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1GE460.0e+0097.84tyrosyl-DNA phosphodiesterase 1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
A0A6J1IK170.0e+0098.29tyrosyl-DNA phosphodiesterase 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111... [more]
A0A6J1GF280.0e+0097.67tyrosyl-DNA phosphodiesterase 1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1... [more]
BLAST of CmaCh03G005220 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022978031.10.0e+00100.00tyrosyl-DNA phosphodiesterase 1 isoform X2 [Cucurbita maxima][more]
XP_022978029.10.0e+0099.84tyrosyl-DNA phosphodiesterase 1 isoform X1 [Cucurbita maxima] >XP_022978030.1 ty... [more]
XP_023544484.10.0e+0098.15tyrosyl-DNA phosphodiesterase 1 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022950186.10.0e+0097.84tyrosyl-DNA phosphodiesterase 1 isoform X2 [Cucurbita moschata] >KAG7033930.1 Ty... [more]
XP_023544483.10.0e+0098.14tyrosyl-DNA phosphodiesterase 1 isoform X1 [Cucurbita pepo subsp. pepo][more]
BLAST of CmaCh03G005220 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G15170.18.8e-24563.52tyrosyl-DNA phosphodiesterase-related [more]
AT5G07400.13.1e-0826.67forkhead-associated domain-containing protein / FHA domain-containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010347Tyrosyl-DNA phosphodiesterase IPFAMPF06087Tyr-DNA_phosphocoord: 226..662
e-value: 8.3E-95
score: 318.2
IPR010347Tyrosyl-DNA phosphodiesterase IPANTHERPTHR12415TYROSYL-DNA PHOSPHODIESTERASE 1coord: 92..683
NoneNo IPR availableGENE3D3.30.870.10Endonuclease Chain Acoord: 212..410
e-value: 2.0E-53
score: 182.8
NoneNo IPR availableGENE3D2.60.200.20coord: 59..155
e-value: 6.7E-17
score: 63.3
NoneNo IPR availableGENE3D3.30.870.10Endonuclease Chain Acoord: 413..686
e-value: 3.8E-84
score: 284.1
NoneNo IPR availablePANTHERPTHR12415:SF0TYROSYL-DNA PHOSPHODIESTERASE 1coord: 92..683
NoneNo IPR availableCDDcd09122PLDc_Tdp1_1coord: 243..378
e-value: 1.44709E-51
score: 173.594
NoneNo IPR availableSUPERFAMILY56024Phospholipase D/nucleasecoord: 413..685
NoneNo IPR availableSUPERFAMILY56024Phospholipase D/nucleasecoord: 223..437
IPR041388PNK, FHA domainPFAMPF17913FHA_2coord: 68..151
e-value: 6.9E-6
score: 26.2
IPR000253Forkhead-associated (FHA) domainCDDcd00060FHAcoord: 59..152
e-value: 3.43849E-9
score: 52.7738
IPR008984SMAD/FHA domain superfamilySUPERFAMILY49879SMAD/FHA domaincoord: 51..158

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G005220.1CmaCh03G005220.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006302 double-strand break repair
biological_process GO:0000012 single strand break repair
biological_process GO:0006281 DNA repair
cellular_component GO:0005634 nucleus
molecular_function GO:0017005 3'-tyrosyl-DNA phosphodiesterase activity
molecular_function GO:0003690 double-stranded DNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003697 single-stranded DNA binding
molecular_function GO:0008081 phosphoric diester hydrolase activity