CmaCh03G004690 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAATATTTTATTTCTTCCGACGCTTCTCGACGAGCCGTCCATCTTCCACGTGTCCCTCCCCACTCTCTACCTTCGCCTTCAAGAGGTACTCCGAAGCAACACGAAGCTCTAAAATGCGCACACTCTTCTAGAGAGAGAGAGAGAGAGAGAGAGAGAAAACGGAGCTCGCACGCTCCCTACCCACTTCTAGATAGAGATAGAGACAGAGGGTCTTTTTCTTTCTTCGATAGCGAATTAGGGTTTTTTCTTCGCGTTTTTGGAGCGGAAATTTGGAGGAATTTGTTCGGTTTTGCTTGTTTCTTCCCCGTTTGGGTGGAGATGTATGTATCTTCCATGAGAAAATCGTTCAAGGACTCTCTCAAATTGCTTGAAGCTGATATTCAGCATGCTAATACTCTGTAAGTGAGCTTTGATTCTTCTTCTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTTCTCTGCTTTGAATATCGTCTTTGACTGTATATGGAAGGCTTTTGTCTGATCACTTTTGGTGTCTGGGCTTCTCCCTCCGATTTTGCTTGTAATGCAGTTTCTAGGTTTGATTTTAAGTATTGTGGGTCTTGAAGTTGCTGTTTATGAGCCGTATACTCTTCGTTAATAATGAATTTTGGGAACGTGATTGTCGTTTACCTGCTGTGTTTGGAGCTTGGCAAACTCATTTTGTGTAATATTTTATTTCAATGATGATTTGGTTTCTGTCTTGCTAACGCTCATATGCACATATAGAGACAAATTTGCGTTTCTCTCTCTGTTTTATAGTTCTATTTCTTGAAAGGGAAATTGTTTGGTCATTTGGCGTTGGATGATTTGGCAATGTATATGTCACACTTCAAATAGTTTGTCATCATTCTCATGAATTGTTCTTGGGTTTATTGTTGATGTGTTCTCTAAGATTTCTGCATCCCACTGTGGACTTGTGGTGCAGATTATGTACCTCGTCTCTTGAACTATGCAGTACTTTCTCTGAGAGAGTAGTTTAGAACTCATTTAATCTTGTTCTTCCTAGCTCTCCAGATGTGCCTTGAATTATGGTTTATCATATGTATCATATTTAACCTTTATTATTGCGATATTTAACCTTTATTATTGGCAAATATCTCCGTTACGACTCATATTTGCCCTTTTATTATAGCCAAAATCTTGTTTGTAAATGATTATAGATAGAGAACTTTAGTGGTGGTTTAACAAATATTCTCAGCTGCATCTACTCTTTGAAGTGTGATAATGAATAAACAAGGCATACTTTATACTTCAAAAAAATTACTAAGCACAAGCTTGGTTTTTTTTGTTCTTTTTAAATTTGAAAATTTGAGAAATGTGATCCGTCTTTTTTTTGTTTTCTTCTTAAAGAGAATAAAAGACAGAAAAGAAAAGAAAAAAAAACATGTTCCAATGGGCCGTAGTTTTTATGTTATGGATCATGCTTTGTTCCAGGTATGAAAAGTTACAAATACATCATAAGCTGAAATGTGTGAACACTTGTGATTTCTCTCTGGTTTGTTGTTCTTGGAGATTCTTGAGGTTGCTGGTTTTTCAAGTATGTCAGCTTAATGTTTACTGTTCCTGAGCTGTAGGGCATCGGAGTTTCCCGGGGAATATGATGGCCCCTGCCTTCAGATGAGAATGTCATACAGTCCTGCTGCTCACTTGTTCCTCTTCCTAGTGCAATGGACAGATTGCCATCTTGCAGGTGCTCTTGGACTGCTGAGGATTTTAATTTACAAGGTAAAGTTTGTCACCTCGTGGTCTCCTAGCATTACATTTCAACATCATCACTTTTATATCTATTTAGCGTTGTTGAATTCACTATGTACATTGTGCTGCAGGTCTATGTGGATGGTACGACCACGATGTCCACCCACGAGAGAAAAGCAAGCATCAGGGAATTCTATGGTAGTATGCGAGTATTTTACTTTTTCCATCATATGATTGTTTGCTATATATTTATTTTTTAACTACTGACTTCTGTAATTTGTGCTATGATCAGCTGTTATTTACCCCTCTCTATTGCAACTTCAGAGAGGTGTTACCGATACTGAGGATAAAAAACAGAATGCTGTCTGCATGGAAAGGTACCGAAGAAGAGATGACAATGAATGTATACAGTGTTCGGATGCTGACATTGAACGAGAAGAAGAATGTGGAATATGCATGGAGACTACTAGCAAGGTTGTATTGCCCAACTGCAACCACGCGTTGTGCTTGAAATGTTACCGTGAATGGTACTATCATCTCTTTTGTTCTACTTTTTCTGTTTTATCGGTAGCTTATTAAACTAAGAACTAAGAAGGATTAATTAAAATTTTCCTATGCACCTTAATATTTATTGTCTTCGTTAATTACAGAACCTACAGAGTCGAAAGCCTTTTGTTCATCTTTAATTGATTGGATGGAGCCCTTAATATTTATGACTGACTGCATTTAACTGCTTTTGCTACCTTATATCGACTTCAAATAATTACATTGTTCTAGTGAATGTTCTTCAGGCGAACACGTTCCCAGTCATGCCCCTTCTGTCGTGACAGTCTTAAGAGAGTAAACTCGGGCGATCTCTGGGTATTTACTGATAACAGGGACATCATGGACATGGCAACGGTGACTCGAGAGAACCTCAAAAGGTTTTTCAAGTACGTAGATAAGTTACCTACGATTGTTCCGGACTCCCTTTTCAATGCCTACGATACGCACCTAAGATAAGTGATCGGTTCGTACATAATATAATGTCACTTAATAAGTAGTTTTTTCTCCAAATGAACAGTCCTTTTGCAATGAGATGACTTGACAACAGGACTGAAATTCATTCGGCTAAAATTTAGTGAAATCTAGAGAAGGCTTGCAGCTGTTTCTTCCCACTCCCATTTCTGAAGAAAAAGAAAACCAGTCTTTGAGTTAATTGTAGACTGGTAATGAGTGGTGGTGAAGTTTATATAGTTTGATTTGAAGTCTTCCATGAATATTGTATTTAACTCATTTGTACATGTTTGTAAATTCTTGATGTTATCTATAGAAAGCAGCTTTGAATGCCTAAGTTGGTTTAAA ATAATATTTTATTTCTTCCGACGCTTCTCGACGAGCCGTCCATCTTCCACGTGTCCCTCCCCACTCTCTACCTTCGCCTTCAAGAGGTACTCCGAAGCAACACGAAGCTCTAAAATGCGCACACTCTTCTAGAGAGAGAGAGAGAGAGAGAGAGAGAAAACGGAGCTCGCACGCTCCCTACCCACTTCTAGATAGAGATAGAGACAGAGGGTCTTTTTCTTTCTTCGATAGCGAATTAGGGTTTTTTCTTCGCGTTTTTGGAGCGGAAATTTGGAGGAATTTGTTCGGTTTTGCTTGTTTCTTCCCCGTTTGGGTGGAGATGTATGTATCTTCCATGAGAAAATCGTTCAAGGACTCTCTCAAATTGCTTGAAGCTGATATTCAGCATGCTAATACTCTGGCATCGGAGTTTCCCGGGGAATATGATGGCCCCTGCCTTCAGATGAGAATGTCATACAGTCCTGCTGCTCACTTGTTCCTCTTCCTAGTGCAATGGACAGATTGCCATCTTGCAGGTGCTCTTGGACTGCTGAGGATTTTAATTTACAAGGTCTATGTGGATGGTACGACCACGATGTCCACCCACGAGAGAAAAGCAAGCATCAGGGAATTCTATGGTACTGTTATTTACCCCTCTCTATTGCAACTTCAGAGAGGTGTTACCGATACTGAGGATAAAAAACAGAATGCTGTCTGCATGGAAAGGTACCGAAGAAGAGATGACAATGAATGTATACAGTGTTCGGATGCTGACATTGAACGAGAAGAAGAATGTGGAATATGCATGGAGACTACTAGCAAGGTTGTATTGCCCAACTGCAACCACGCGTTGTGCTTGAAATGTTACCGTGAATGGCGAACACGTTCCCAGTCATGCCCCTTCTGTCGTGACAGTCTTAAGAGAGTAAACTCGGGCGATCTCTGGGTATTTACTGATAACAGGGACATCATGGACATGGCAACGGTGACTCGAGAGAACCTCAAAAGGTTTTTCAAGTACGTAGATAAGTTACCTACGATTGTTCCGGACTCCCTTTTCAATGCCTACGATACGCACCTAAGATAAGTGATCGGTTCGTACATAATATAATGTCACTTAATAAGTAGTTTTTTCTCCAAATGAACAGTCCTTTTGCAATGAGATGACTTGACAACAGGACTGAAATTCATTCGGCTAAAATTTAGTGAAATCTAGAGAAGGCTTGCAGCTGTTTCTTCCCACTCCCATTTCTGAAGAAAAAGAAAACCAGTCTTTGAGTTAATTGTAGACTGGTAATGAGTGGTGGTGAAGTTTATATAGTTTGATTTGAAGTCTTCCATGAATATTGTATTTAACTCATTTGTACATGTTTGTAAATTCTTGATGTTATCTATAGAAAGCAGCTTTGAATGCCTAAGTTGGTTTAAA ATGTATGTATCTTCCATGAGAAAATCGTTCAAGGACTCTCTCAAATTGCTTGAAGCTGATATTCAGCATGCTAATACTCTGGCATCGGAGTTTCCCGGGGAATATGATGGCCCCTGCCTTCAGATGAGAATGTCATACAGTCCTGCTGCTCACTTGTTCCTCTTCCTAGTGCAATGGACAGATTGCCATCTTGCAGGTGCTCTTGGACTGCTGAGGATTTTAATTTACAAGGTCTATGTGGATGGTACGACCACGATGTCCACCCACGAGAGAAAAGCAAGCATCAGGGAATTCTATGGTACTGTTATTTACCCCTCTCTATTGCAACTTCAGAGAGGTGTTACCGATACTGAGGATAAAAAACAGAATGCTGTCTGCATGGAAAGGTACCGAAGAAGAGATGACAATGAATGTATACAGTGTTCGGATGCTGACATTGAACGAGAAGAAGAATGTGGAATATGCATGGAGACTACTAGCAAGGTTGTATTGCCCAACTGCAACCACGCGTTGTGCTTGAAATGTTACCGTGAATGGCGAACACGTTCCCAGTCATGCCCCTTCTGTCGTGACAGTCTTAAGAGAGTAAACTCGGGCGATCTCTGGGTATTTACTGATAACAGGGACATCATGGACATGGCAACGGTGACTCGAGAGAACCTCAAAAGGTTTTTCAAGTACGTAGATAAGTTACCTACGATTGTTCCGGACTCCCTTTTCAATGCCTACGATACGCACCTAAGATAA MYVSSMRKSFKDSLKLLEADIQHANTLASEFPGEYDGPCLQMRMSYSPAAHLFLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYGTVIYPSLLQLQRGVTDTEDKKQNAVCMERYRRRDDNECIQCSDADIEREEECGICMETTSKVVLPNCNHALCLKCYREWRTRSQSCPFCRDSLKRVNSGDLWVFTDNRDIMDMATVTRENLKRFFKYVDKLPTIVPDSLFNAYDTHLR Homology
BLAST of CmaCh03G004690 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1) HSP 1 Score: 339.7 bits (870), Expect = 2.7e-92 Identity = 158/232 (68.10%), Postives = 189/232 (81.47%), Query Frame = 0
BLAST of CmaCh03G004690 vs. ExPASy Swiss-Prot
Match: Q13434 (Putative E3 ubiquitin-protein ligase makorin-4 OS=Homo sapiens OX=9606 GN=MKRN4P PE=5 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 7.8e-07 Identity = 30/90 (33.33%), Postives = 43/90 (47.78%), Query Frame = 0
BLAST of CmaCh03G004690 vs. ExPASy Swiss-Prot
Match: Q13064 (Probable E3 ubiquitin-protein ligase makorin-3 OS=Homo sapiens OX=9606 GN=MKRN3 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 1.7e-06 Identity = 29/90 (32.22%), Postives = 43/90 (47.78%), Query Frame = 0
BLAST of CmaCh03G004690 vs. ExPASy Swiss-Prot
Match: Q9UHC7 (E3 ubiquitin-protein ligase makorin-1 OS=Homo sapiens OX=9606 GN=MKRN1 PE=1 SV=3) HSP 1 Score: 53.9 bits (128), Expect = 3.0e-06 Identity = 32/97 (32.99%), Postives = 44/97 (45.36%), Query Frame = 0
BLAST of CmaCh03G004690 vs. ExPASy Swiss-Prot
Match: Q9TT91 (E3 ubiquitin-protein ligase makorin-1 OS=Macropus eugenii OX=9315 GN=MKRN1 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.0e-06 Identity = 32/97 (32.99%), Postives = 44/97 (45.36%), Query Frame = 0
BLAST of CmaCh03G004690 vs. ExPASy TrEMBL
Match: A0A6J1IRM8 (uncharacterized protein LOC111477841 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111477841 PE=4 SV=1) HSP 1 Score: 508.1 bits (1307), Expect = 2.1e-140 Identity = 246/248 (99.19%), Postives = 246/248 (99.19%), Query Frame = 0
BLAST of CmaCh03G004690 vs. ExPASy TrEMBL
Match: A0A6J1GDY9 (uncharacterized protein LOC111453288 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453288 PE=4 SV=1) HSP 1 Score: 504.2 bits (1297), Expect = 3.1e-139 Identity = 244/248 (98.39%), Postives = 245/248 (98.79%), Query Frame = 0
BLAST of CmaCh03G004690 vs. ExPASy TrEMBL
Match: A0A5D3CPM3 (RING finger protein 141 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007380 PE=4 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 1.6e-135 Identity = 238/248 (95.97%), Postives = 243/248 (97.98%), Query Frame = 0
BLAST of CmaCh03G004690 vs. ExPASy TrEMBL
Match: A0A1S3AZR9 (uncharacterized protein LOC103484529 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484529 PE=4 SV=1) HSP 1 Score: 491.9 bits (1265), Expect = 1.6e-135 Identity = 238/248 (95.97%), Postives = 243/248 (97.98%), Query Frame = 0
BLAST of CmaCh03G004690 vs. ExPASy TrEMBL
Match: A0A0A0KLG2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G517250 PE=4 SV=1) HSP 1 Score: 491.5 bits (1264), Expect = 2.1e-135 Identity = 238/248 (95.97%), Postives = 242/248 (97.58%), Query Frame = 0
BLAST of CmaCh03G004690 vs. NCBI nr
Match: XP_022977539.1 (uncharacterized protein LOC111477841 isoform X1 [Cucurbita maxima]) HSP 1 Score: 508.1 bits (1307), Expect = 4.4e-140 Identity = 246/248 (99.19%), Postives = 246/248 (99.19%), Query Frame = 0
BLAST of CmaCh03G004690 vs. NCBI nr
Match: XP_022950103.1 (uncharacterized protein LOC111453288 isoform X1 [Cucurbita moschata]) HSP 1 Score: 504.2 bits (1297), Expect = 6.4e-139 Identity = 244/248 (98.39%), Postives = 245/248 (98.79%), Query Frame = 0
BLAST of CmaCh03G004690 vs. NCBI nr
Match: KAG6603701.1 (E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 503.1 bits (1294), Expect = 1.4e-138 Identity = 243/248 (97.98%), Postives = 245/248 (98.79%), Query Frame = 0
BLAST of CmaCh03G004690 vs. NCBI nr
Match: KAG7033879.1 (RING finger protein-like protein [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 501.5 bits (1290), Expect = 4.1e-138 Identity = 244/260 (93.85%), Postives = 247/260 (95.00%), Query Frame = 0
BLAST of CmaCh03G004690 vs. NCBI nr
Match: XP_023544758.1 (uncharacterized protein LOC111804253 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 497.3 bits (1279), Expect = 7.8e-137 Identity = 240/248 (96.77%), Postives = 243/248 (97.98%), Query Frame = 0
BLAST of CmaCh03G004690 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein ) HSP 1 Score: 339.7 bits (870), Expect = 1.9e-93 Identity = 158/232 (68.10%), Postives = 189/232 (81.47%), Query Frame = 0
BLAST of CmaCh03G004690 vs. TAIR 10
Match: AT3G47160.1 (RING/U-box superfamily protein ) HSP 1 Score: 335.9 bits (860), Expect = 2.8e-92 Identity = 155/242 (64.05%), Postives = 192/242 (79.34%), Query Frame = 0
BLAST of CmaCh03G004690 vs. TAIR 10
Match: AT5G58787.1 (RING/U-box superfamily protein ) HSP 1 Score: 333.6 bits (854), Expect = 1.4e-91 Identity = 161/242 (66.53%), Postives = 190/242 (78.51%), Query Frame = 0
BLAST of CmaCh03G004690 vs. TAIR 10
Match: AT3G47160.2 (RING/U-box superfamily protein ) HSP 1 Score: 327.4 bits (838), Expect = 9.9e-90 Identity = 155/254 (61.02%), Postives = 192/254 (75.59%), Query Frame = 0
BLAST of CmaCh03G004690 vs. TAIR 10
Match: AT5G58787.2 (RING/U-box superfamily protein ) HSP 1 Score: 306.6 bits (784), Expect = 1.8e-83 Identity = 149/242 (61.57%), Postives = 178/242 (73.55%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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