CmaCh03G004480 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh03G004480
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Descriptionprotein SLOW GREEN 1, chloroplastic-like
LocationCma_Chr03: 4645572 .. 4646639 (+)
RNA-Seq ExpressionCmaCh03G004480
SyntenyCmaCh03G004480
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTCTCTTCCTACAGTTCACCACCGTCATCATCCTTCTCAACAACTTCTTTCCTTCAGCCACCGCCTTCCGTCGTTCCCTAAACCCATATCTTCTCTCTCCTTCGCGCATACGCCGCCGACTCGTCTCCGTTCGTCTTTCAGGTCGTTGTCTGTTAAAGCCTCATCCTCTCAATCGACCTCCGACGAACCCTCACGGAACGCCAAATCTTCCATTTCCGAGACCACGAATGGCGGCCTGTTGTCGGGGTTTCTTAAAACCGCTTGCATCTCTGTTGCCGCTGCTGCAGCATTCTACTTCCTTCGCTTCGACCATCGACGCGTTGTTGCTGTTGCTGTCCCGGTGGCGCCGGTGACGACGGAGTCTACTGATGAATCGACGGTCCATGAGGAAAATGAGAGCGTTGTAGAAGAGAAACCAACAGATGATTTGAGAGGTGCTGAAACCCTTCGATCCCTCGTTGAGGAGAATGTAAAATCAGGTAAACTTCCCGAAGCAATTGAAACCCTAAGCCGTTTAATCGAAATTGAGCCCAATGACCGTGAGTTGCCTTTGCTAAGAGCCAATATCCGTAGCTATGCGGGGCAGCTCGAATTGGCTAAAAATGAATTTGAAGAGATTTTAAGGGAAGACCCATTTCGTGTTGAGGCCTACCATGGCCTTGTGATGGTATCAGAGCAATTGAACGATAATTCATTGAAGGACGTTACTAAAAGGATCGAAGAGGCAATGGAGAAATGCAAGAAGCAAAATGACAAGTCAGTTATCCGGGATTTCAAGCTCTTGCTTGCGCAAATTAAGGTAATGAAGGGGAGCTATTTTGATGCATTGAAAGCATACGATGAACTTGTGAGGGAGGAGCCAAAGGATTTTAGGCCATATCTGTGTCGGGGGATCATATATACTCTTTTAAGGAAGAATAAGGAGGCTGAGAAACAGTTTGAGAAATTTAGGAGACTTGTTCCAAAGAACCATCCTTATAAAGAGTACTTTGATGAAAACATGTTTGCAACAAAGCTTTTTGCTCAGAAATTAGAGAAGGAGAAGGCTGGTTTGAAGAGCTGA

mRNA sequence

ATGGAGTCTCTTCCTACAGTTCACCACCGTCATCATCCTTCTCAACAACTTCTTTCCTTCAGCCACCGCCTTCCGTCGTTCCCTAAACCCATATCTTCTCTCTCCTTCGCGCATACGCCGCCGACTCGTCTCCGTTCGTCTTTCAGGTCGTTGTCTGTTAAAGCCTCATCCTCTCAATCGACCTCCGACGAACCCTCACGGAACGCCAAATCTTCCATTTCCGAGACCACGAATGGCGGCCTGTTGTCGGGGTTTCTTAAAACCGCTTGCATCTCTGTTGCCGCTGCTGCAGCATTCTACTTCCTTCGCTTCGACCATCGACGCGTTGTTGCTGTTGCTGTCCCGGTGGCGCCGGTGACGACGGAGTCTACTGATGAATCGACGGTCCATGAGGAAAATGAGAGCGTTGTAGAAGAGAAACCAACAGATGATTTGAGAGGTGCTGAAACCCTTCGATCCCTCGTTGAGGAGAATGTAAAATCAGGTAAACTTCCCGAAGCAATTGAAACCCTAAGCCGTTTAATCGAAATTGAGCCCAATGACCGTGAGTTGCCTTTGCTAAGAGCCAATATCCGTAGCTATGCGGGGCAGCTCGAATTGGCTAAAAATGAATTTGAAGAGATTTTAAGGGAAGACCCATTTCGTGTTGAGGCCTACCATGGCCTTGTGATGGTATCAGAGCAATTGAACGATAATTCATTGAAGGACGTTACTAAAAGGATCGAAGAGGCAATGGAGAAATGCAAGAAGCAAAATGACAAGTCAGTTATCCGGGATTTCAAGCTCTTGCTTGCGCAAATTAAGGTAATGAAGGGGAGCTATTTTGATGCATTGAAAGCATACGATGAACTTGTGAGGGAGGAGCCAAAGGATTTTAGGCCATATCTGTGTCGGGGGATCATATATACTCTTTTAAGGAAGAATAAGGAGGCTGAGAAACAGTTTGAGAAATTTAGGAGACTTGTTCCAAAGAACCATCCTTATAAAGAGTACTTTGATGAAAACATGTTTGCAACAAAGCTTTTTGCTCAGAAATTAGAGAAGGAGAAGGCTGGTTTGAAGAGCTGA

Coding sequence (CDS)

ATGGAGTCTCTTCCTACAGTTCACCACCGTCATCATCCTTCTCAACAACTTCTTTCCTTCAGCCACCGCCTTCCGTCGTTCCCTAAACCCATATCTTCTCTCTCCTTCGCGCATACGCCGCCGACTCGTCTCCGTTCGTCTTTCAGGTCGTTGTCTGTTAAAGCCTCATCCTCTCAATCGACCTCCGACGAACCCTCACGGAACGCCAAATCTTCCATTTCCGAGACCACGAATGGCGGCCTGTTGTCGGGGTTTCTTAAAACCGCTTGCATCTCTGTTGCCGCTGCTGCAGCATTCTACTTCCTTCGCTTCGACCATCGACGCGTTGTTGCTGTTGCTGTCCCGGTGGCGCCGGTGACGACGGAGTCTACTGATGAATCGACGGTCCATGAGGAAAATGAGAGCGTTGTAGAAGAGAAACCAACAGATGATTTGAGAGGTGCTGAAACCCTTCGATCCCTCGTTGAGGAGAATGTAAAATCAGGTAAACTTCCCGAAGCAATTGAAACCCTAAGCCGTTTAATCGAAATTGAGCCCAATGACCGTGAGTTGCCTTTGCTAAGAGCCAATATCCGTAGCTATGCGGGGCAGCTCGAATTGGCTAAAAATGAATTTGAAGAGATTTTAAGGGAAGACCCATTTCGTGTTGAGGCCTACCATGGCCTTGTGATGGTATCAGAGCAATTGAACGATAATTCATTGAAGGACGTTACTAAAAGGATCGAAGAGGCAATGGAGAAATGCAAGAAGCAAAATGACAAGTCAGTTATCCGGGATTTCAAGCTCTTGCTTGCGCAAATTAAGGTAATGAAGGGGAGCTATTTTGATGCATTGAAAGCATACGATGAACTTGTGAGGGAGGAGCCAAAGGATTTTAGGCCATATCTGTGTCGGGGGATCATATATACTCTTTTAAGGAAGAATAAGGAGGCTGAGAAACAGTTTGAGAAATTTAGGAGACTTGTTCCAAAGAACCATCCTTATAAAGAGTACTTTGATGAAAACATGTTTGCAACAAAGCTTTTTGCTCAGAAATTAGAGAAGGAGAAGGCTGGTTTGAAGAGCTGA

Protein sequence

MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQSTSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPVTTESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIEPNDRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKRIEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCRGIIYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS
Homology
[Close]
BLAST of CmaCh03G004480 vs. ExPASy Swiss-Prot
Match: Q9LS48 (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.6e-27
Identity = 96/310 (30.97%), Postives = 160/310 (51.61%), Query Frame = 0 

Query: 39  TPPTRLRSSFRSLSVKASSSQSTSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAA 98
           T P   R    S+ ++ASS+Q++S         S ++       S  L  A +S+    +
Sbjct: 24  TGPLIPRRDLLSIRIRASSNQNSSGYCFPEKFKSFAK-------SAILIGAAVSMTGKFS 83

Query: 99  FYFLRFDHRRVVAVAVPVAPVTTESTDESTVHE-ENESVVEEKPTDDL-----RGAETLR 158
                          +PV   +  +T E T  E + E + E  P  +L        ETLR
Sbjct: 84  --------------TLPVKAESPVTTIEKTYEEVKEEKLSEITPLSELLDSTPEAVETLR 143

Query: 159 SLVEENVKSGKLPEAIETLSRLIEIEPNDRELPLLRANIRSYAGQLELAKNEFEEILRED 218
           SL+++ ++ G+  EA++ L RL+  +P + E   L A +    G+ E A+  FEEIL+ +
Sbjct: 144 SLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMARLLGEMGRPENARQMFEEILQRN 203

Query: 219 PFRVEAYHGLVMVSEQLNDNSLKDVTKRIEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKG 278
           P   EA     ++ ++  + +   V +R+E+A+   + +      RD +L++AQI  ++ 
Sbjct: 204 PLSFEALFENALLMDRSGEGNA--VLQRLEDALAVAEAEYLVKEARDVRLIIAQIHFLQK 263

Query: 279 SYFDALKAYDELVREEPKDFRPYLCRGIIYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYF 338
           +  +ALK+Y++L +E+PKDFRPY CRG+IY+LL KN EA++QF K+R L PK    + Y 
Sbjct: 264 NVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYRELSPKKFEVEGYL 310

Query: 339 DENMFATKLF 343
              +   KLF
Sbjct: 324 RTPLSKMKLF 310

[Close]
BLAST of CmaCh03G004480 vs. ExPASy Swiss-Prot
Match: F8RP11 (Hsp70-Hsp90 organizing protein OS=Triticum aestivum OX=4565 GN=HOP PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.8e-04
Identity = 61/208 (29.33%), Postives = 87/208 (41.83%), Query Frame = 0 

Query: 159 VKSGKLPEAIETLSRLIEIEPNDREL-----PLLRANIRSYAGQLELAKNEFEEILREDP 218
           ++ GK  E IE   + +E     REL      + RA  R      +LAKN  +  +  + 
Sbjct: 298 IEMGKYDECIEDCDKAVE---RGRELRADFKMVARALTRKGTALAKLAKNSKDYDIAIET 357

Query: 219 FRVEAYHGLVMVSEQLNDNSLKDVTKRIEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGS 278
           F+           + L ++   D  KR+ EA EK KK  ++    D K  LA  +  KG+
Sbjct: 358 FQ-----------KALTEHRNPDTLKRLNEA-EKAKKDLEQQEYYDPK--LADEEREKGN 417

Query: 279 -------YFDALKAYDELVREEPKDFRPYLCRGIIYTLLRKNKEAEKQFEKFRRLVPKNH 338
                  Y +A+K Y+E +R  PKD R Y  R   YT L    E  K  EK   L P   
Sbjct: 418 EMFKQQKYPEAIKHYNEAIRRNPKDARVYSNRAACYTKLGAMPEGLKDAEKCIELDPTFT 477

Query: 339 PYKEYFDENMFATKLFAQKLEKEKAGLK 355
                     F  K + + +E  +AGLK
Sbjct: 478 KGYTRKGAVQFFMKEYEKAMETYQAGLK 488

[Close]
BLAST of CmaCh03G004480 vs. ExPASy Swiss-Prot
Match: Q54DA8 (Protein STIP1 homolog OS=Dictyostelium discoideum OX=44689 GN=sti1 PE=3 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.1e-04
Identity = 65/256 (25.39%), Postives = 115/256 (44.92%), Query Frame = 0 

Query: 115 PVAPVTTESTDESTV-------HEENESVVEEKPTDDLRGAETL--RSLVEENVKSGKLP 174
           P AP  TES  E  +        E  +++V      +L  ++ L   +     ++  KL 
Sbjct: 236 PEAPPMTESQKERDLGNKAYAKKEFEQAIVHYDKAVELDSSDILAMNNKAAVLIEQQKLD 295

Query: 175 EAIETLSRLIEIEPNDRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMV 234
           EAIET  + +E     R    +++ + +  G + L KN+ ++  +       AY   V+ 
Sbjct: 296 EAIETCKKALEKAQEIRADYRVKSKVYTRLGNIYLKKNQLDDAYK-------AYSSAVL- 355

Query: 235 SEQLNDNSLKDVTKRIEEAMEKCKKQ-NDKSVIRDFKLLLAQIK----VMKGSYFDALKA 294
            E  N ++  ++ K     +EK KKQ +D++ +   + ++ + K      KG + +A+K 
Sbjct: 356 -EDKNADTTANMKK-----IEKLKKQRDDEAYLSVDQSIIEKNKGVEHFKKGEFPEAIKC 415

Query: 295 YDELVREEPKDFRPYLCRGIIYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDEN--MFA 354
           ++E +R  PKD   Y  R   Y+ L + K A K  +K   L P     K Y  +   +FA
Sbjct: 416 FEEAIRRNPKDHTIYSNRSAAYSKLLEYKLAIKDADKCIELEPTF--IKGYIRKGTALFA 475

[Close]
BLAST of CmaCh03G004480 vs. ExPASy Swiss-Prot
Match: Q58741 (TPR repeat-containing protein MJ1345 OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=MJ1345 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 8.9e-04
Identity = 53/192 (27.60%), Postives = 82/192 (42.71%), Query Frame = 0 

Query: 159 VKSGKLPEAIETLSRLIEIEPNDRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEA 218
           V  GKL EA E   +L  +E +D  +  + A I    G+ + A    ++IL++ P    A
Sbjct: 90  VSLGKLEEAKEVFLKLCRLEKSDLPVKYVTAFILKKLGEYDYALKIIDKILKKYPKSAIA 149

Query: 219 Y---------HGLVMVSEQLNDNSLKDVTK----------------RIEEAMEKCKKQND 278
           +          G +  S +  DN+LK   K                R  EA+ KC K+  
Sbjct: 150 WAEKGEILYREGKLKKSLECFDNALKINPKDCQSLLYKGEILFKLGRYGEAL-KCLKKVF 209

Query: 279 KSVIRDFKLL--LAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCRGIIYTLLRKNKEA 324
           +   +D + L  + QI +  G    AL+   + ++  P D   YL +GII   L K  EA
Sbjct: 210 ERNNKDIRALMYIIQILIYLGRLNQALEYTKKALKLNPDDPLLYLYKGIILNKLGKYNEA 269

[Close]
BLAST of CmaCh03G004480 vs. ExPASy TrEMBL
Match: A0A6J1IQW2 (protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111477618 PE=4 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 1.2e-189
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0 

Query: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60
           MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS
Sbjct: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60

Query: 61  TSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPVT 120
           TSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPVT
Sbjct: 61  TSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPVT 120

Query: 121 TESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIEPN 180
           TESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIEPN
Sbjct: 121 TESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIEPN 180

Query: 181 DRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240
           DRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR
Sbjct: 181 DRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240

Query: 241 IEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCRGI 300
           IEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCRGI
Sbjct: 241 IEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCRGI 300

Query: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS 356
           IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS
Sbjct: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS 355

[Close]
BLAST of CmaCh03G004480 vs. ExPASy TrEMBL
Match: A0A6J1GF65 (protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111453392 PE=4 SV=1)

HSP 1 Score: 650.6 bits (1677), Expect = 3.8e-183
Identity = 343/355 (96.62%), Postives = 348/355 (98.03%), Query Frame = 0 

Query: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60
           MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS
Sbjct: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60

Query: 61  TSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPVT 120
           TSDEPSRNAKSSISET NGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVA  T
Sbjct: 61  TSDEPSRNAKSSISETRNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVASET 120

Query: 121 TESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIEPN 180
           TESTDEST HEENESVVEEKPTDD  GAETLRSLVEENVK GKLPEAIETLSRLIE+EPN
Sbjct: 121 TESTDESTAHEENESVVEEKPTDDSSGAETLRSLVEENVKLGKLPEAIETLSRLIELEPN 180

Query: 181 DRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240
           DRELPLLRAN+RSYAGQLELA+NEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR
Sbjct: 181 DRELPLLRANVRSYAGQLELARNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240

Query: 241 IEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCRGI 300
           IEEA+EKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLC+GI
Sbjct: 241 IEEAVEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCQGI 300

Query: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS 356
           IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS
Sbjct: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS 355

[Close]
BLAST of CmaCh03G004480 vs. ExPASy TrEMBL
Match: A0A6J1HFV1 (protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111463182 PE=4 SV=1)

HSP 1 Score: 521.2 bits (1341), Expect = 3.5e-144
Identity = 286/357 (80.11%), Postives = 307/357 (85.99%), Query Frame = 0 

Query: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRS--SFRSLSVKASSS 60
           ME L T HHR  PSQQ LSFS RLPSF  P SSL F   PP+RLRS  SFRSLSVKASSS
Sbjct: 1   MEGLATFHHRPLPSQQHLSFSRRLPSFSYPSSSLFFLSPPPSRLRSPLSFRSLSVKASSS 60

Query: 61  QSTSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAP 120
            STSDE SRNAK SISETTN GLLSGFL+TACISV AAAAF+FLRFDHRR V VA PVAP
Sbjct: 61  PSTSDETSRNAKPSISETTNDGLLSGFLRTACISV-AAAAFFFLRFDHRRAVVVAAPVAP 120

Query: 121 VTTESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIE 180
             TES +ES  +EENESVVEE+P D+    E LRSLVEENVKSGKLPEAIE L+RLIEIE
Sbjct: 121 EMTESIEESNPYEENESVVEEQPMDNSNDVEALRSLVEENVKSGKLPEAIEALNRLIEIE 180

Query: 181 PNDRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVT 240
           PN+ ELPLLRAN  SY G+LELAK+EFEEIL EDP RVEAYHGL +VSEQLNDNSLK V 
Sbjct: 181 PNELELPLLRANFHSYMGELELAKSEFEEILMEDPLRVEAYHGLALVSEQLNDNSLKGVA 240

Query: 241 KRIEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCR 300
           KRIE+AMEKCKKQN KS IRDFKLL+AQIKVM+GSYFDALKAY ELVREEP+DFRPYLC+
Sbjct: 241 KRIEQAMEKCKKQNKKSDIRDFKLLIAQIKVMEGSYFDALKAYQELVREEPRDFRPYLCQ 300

Query: 301 GIIYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS 356
           GIIY+LLRKN+EAEKQFEKFRRLVPKNHPY+EYFDEN+FATKLF QKLEKE AGLKS
Sbjct: 301 GIIYSLLRKNEEAEKQFEKFRRLVPKNHPYREYFDENVFATKLFGQKLEKEGAGLKS 356

[Close]
BLAST of CmaCh03G004480 vs. ExPASy TrEMBL
Match: A0A6J1I5P2 (protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111471257 PE=4 SV=1)

HSP 1 Score: 516.2 bits (1328), Expect = 1.1e-142
Identity = 284/357 (79.55%), Postives = 304/357 (85.15%), Query Frame = 0 

Query: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRS--SFRSLSVKASSS 60
           ME L T HHR  PSQQ LSFS RLP F  P SSL F   P +RLRS  SFRSLSVKASSS
Sbjct: 1   MEGLATFHHRPLPSQQHLSFSRRLPLFSYPTSSLFFRSPPLSRLRSPLSFRSLSVKASSS 60

Query: 61  QSTSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAP 120
            STSDE SRNAK SISETTN G LSGFL+TACISV AAAAF+FLRFDHRR V VA PVAP
Sbjct: 61  PSTSDETSRNAKPSISETTNDGFLSGFLRTACISV-AAAAFFFLRFDHRRAVVVAAPVAP 120

Query: 121 VTTESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIE 180
             T+S +ES  +EENESVVEE+P D+    E LRSLVEENVKSGKLPEAIE L+RLIEIE
Sbjct: 121 EMTDSIEESNPYEENESVVEEQPVDNSNDVEALRSLVEENVKSGKLPEAIEALNRLIEIE 180

Query: 181 PNDRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVT 240
           PN+ ELPLLRAN  SY G+LELAK+EFEEIL EDP RVEAYHGL MVSEQLNDNSLKDV 
Sbjct: 181 PNELELPLLRANFHSYMGELELAKSEFEEILMEDPLRVEAYHGLAMVSEQLNDNSLKDVA 240

Query: 241 KRIEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCR 300
           KRIE+AMEKCKKQN KS IRDFKLL+AQIKVM+GSYFDALKAY ELVREEP+DFRPYLC+
Sbjct: 241 KRIEQAMEKCKKQNKKSDIRDFKLLIAQIKVMEGSYFDALKAYQELVREEPRDFRPYLCQ 300

Query: 301 GIIYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS 356
           GIIY+LLRKN EAEKQFEKFRRLVPKNHPY+EYFDEN+FATKLF QKLEKE AGLKS
Sbjct: 301 GIIYSLLRKNDEAEKQFEKFRRLVPKNHPYREYFDENVFATKLFGQKLEKEGAGLKS 356

[Close]
BLAST of CmaCh03G004480 vs. ExPASy TrEMBL
Match: A0A5A7TWQ7 (Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001590 PE=4 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 2.9e-138
Identity = 273/354 (77.12%), Postives = 299/354 (84.46%), Query Frame = 0 

Query: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60
           MESLP++HHR   S QLLSFSHRL SF KPISSLSF   PP+RLRSS RSL VKASSS S
Sbjct: 1   MESLPSLHHRRFSSHQLLSFSHRLSSFSKPISSLSFRSPPPSRLRSSVRSLRVKASSSSS 60

Query: 61  TSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPVT 120
           TSD+         + + NGGLLSGFLKTACISV A AAF+F RFD+RR VAVAV VAP T
Sbjct: 61  TSDD---------TTSPNGGLLSGFLKTACISV-AVAAFFFHRFDYRRFVAVAVQVAPET 120

Query: 121 TESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIEPN 180
           TESTDEST +EENESVVEEK  DD    E LRSLVEE+VKSGKLPEA+E L+RLIE+EPN
Sbjct: 121 TESTDESTEYEENESVVEEKRADDSNDVEALRSLVEESVKSGKLPEAVEALNRLIELEPN 180

Query: 181 DRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240
           D ELP+LRAN  SY G+LELAKNEFEEIL +DP RVEAYHGL MV+EQLNDNSLKDVTKR
Sbjct: 181 DVELPMLRANFHSYMGELELAKNEFEEILAKDPLRVEAYHGLAMVAEQLNDNSLKDVTKR 240

Query: 241 IEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCRGI 300
           IEEAMEKCK Q DKS IRDFKLL+AQIKVM+GSY DALKAY ELVREEP+DFRPYLC+GI
Sbjct: 241 IEEAMEKCKNQKDKSDIRDFKLLVAQIKVMEGSYLDALKAYQELVREEPRDFRPYLCQGI 300

Query: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLK 355
           IYTLLRK++EAEK FEKFRRLVPKNHPYKEY D+NM+ATK FAQK+EKE AG K
Sbjct: 301 IYTLLRKSEEAEKHFEKFRRLVPKNHPYKEYLDDNMYATKFFAQKVEKEGAGSK 344

[Close]
BLAST of CmaCh03G004480 vs. NCBI nr
Match: XP_022977249.1 (protein SLOW GREEN 1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 672.2 bits (1733), Expect = 2.5e-189
Identity = 355/355 (100.00%), Postives = 355/355 (100.00%), Query Frame = 0 

Query: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60
           MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS
Sbjct: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60

Query: 61  TSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPVT 120
           TSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPVT
Sbjct: 61  TSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPVT 120

Query: 121 TESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIEPN 180
           TESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIEPN
Sbjct: 121 TESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIEPN 180

Query: 181 DRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240
           DRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR
Sbjct: 181 DRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240

Query: 241 IEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCRGI 300
           IEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCRGI
Sbjct: 241 IEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCRGI 300

Query: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS 356
           IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS
Sbjct: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS 355

[Close]
BLAST of CmaCh03G004480 vs. NCBI nr
Match: XP_023545038.1 (protein SLOW GREEN 1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 653.7 bits (1685), Expect = 9.3e-184
Identity = 343/355 (96.62%), Postives = 349/355 (98.31%), Query Frame = 0 

Query: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60
           MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS
Sbjct: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60

Query: 61  TSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPVT 120
           TSDEPSRN+KSSISETTN GLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAP T
Sbjct: 61  TSDEPSRNSKSSISETTNSGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPET 120

Query: 121 TESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIEPN 180
            ESTDEST HEENESVVEEKPTDD  GAETLRSLVEENVKSGKLPEAIETLSRLIE+EPN
Sbjct: 121 MESTDESTAHEENESVVEEKPTDDSSGAETLRSLVEENVKSGKLPEAIETLSRLIELEPN 180

Query: 181 DRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240
           DRELPLLRAN+RSYAGQLELA+NEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR
Sbjct: 181 DRELPLLRANVRSYAGQLELARNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240

Query: 241 IEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCRGI 300
           IEEAMEKCKKQNDKS+IRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLC+GI
Sbjct: 241 IEEAMEKCKKQNDKSIIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCQGI 300

Query: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS 356
           IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS
Sbjct: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS 355

[Close]
BLAST of CmaCh03G004480 vs. NCBI nr
Match: XP_022950245.1 (protein SLOW GREEN 1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 650.6 bits (1677), Expect = 7.9e-183
Identity = 343/355 (96.62%), Postives = 348/355 (98.03%), Query Frame = 0 

Query: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60
           MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS
Sbjct: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60

Query: 61  TSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPVT 120
           TSDEPSRNAKSSISET NGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVA  T
Sbjct: 61  TSDEPSRNAKSSISETRNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVASET 120

Query: 121 TESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIEPN 180
           TESTDEST HEENESVVEEKPTDD  GAETLRSLVEENVK GKLPEAIETLSRLIE+EPN
Sbjct: 121 TESTDESTAHEENESVVEEKPTDDSSGAETLRSLVEENVKLGKLPEAIETLSRLIELEPN 180

Query: 181 DRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240
           DRELPLLRAN+RSYAGQLELA+NEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR
Sbjct: 181 DRELPLLRANVRSYAGQLELARNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240

Query: 241 IEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCRGI 300
           IEEA+EKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLC+GI
Sbjct: 241 IEEAVEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCQGI 300

Query: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS 356
           IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS
Sbjct: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS 355

[Close]
BLAST of CmaCh03G004480 vs. NCBI nr
Match: KAG6603680.1 (protein SLOW GREEN 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033857.1 protein SLOW GREEN 1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 644.8 bits (1662), Expect = 4.3e-181
Identity = 341/355 (96.06%), Postives = 345/355 (97.18%), Query Frame = 0 

Query: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60
           MESLPTVHHRHHPSQQLLS SHRLPSFPKPISSLSFAHTPP RLRSSFRSLSVKASSSQS
Sbjct: 1   MESLPTVHHRHHPSQQLLSISHRLPSFPKPISSLSFAHTPPNRLRSSFRSLSVKASSSQS 60

Query: 61  TSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPVT 120
           TSDE SRNAKSSISET NGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVA  T
Sbjct: 61  TSDESSRNAKSSISETRNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVASET 120

Query: 121 TESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIEPN 180
           TESTDEST HEENESVVEEKPTDD  GAETLRSLVEENVK GKLPEAIETLSRLIE+EPN
Sbjct: 121 TESTDESTAHEENESVVEEKPTDDSSGAETLRSLVEENVKLGKLPEAIETLSRLIELEPN 180

Query: 181 DRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240
           DRELPLLRAN+RSYAGQLELA+NEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR
Sbjct: 181 DRELPLLRANVRSYAGQLELARNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240

Query: 241 IEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCRGI 300
           IEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLC+GI
Sbjct: 241 IEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCQGI 300

Query: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS 356
           IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS
Sbjct: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS 355

[Close]
BLAST of CmaCh03G004480 vs. NCBI nr
Match: XP_038883735.1 (protein SLOW GREEN 1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 574.3 bits (1479), Expect = 7.2e-160
Identity = 308/355 (86.76%), Postives = 322/355 (90.70%), Query Frame = 0 

Query: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60
           MESLPT+HHR HPS QLLS SHRLPSF KPISSLSF   PP+ LRSSFRSLSVKASSS S
Sbjct: 1   MESLPTLHHRRHPSHQLLSSSHRLPSFSKPISSLSFRSPPPSPLRSSFRSLSVKASSSSS 60

Query: 61  TSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPVT 120
           TSDE  RN KSSISETTN GLLSGFLKTACISV AAAAF+FLRFDHRR VAVAVPVAP T
Sbjct: 61  TSDETLRNDKSSISETTNCGLLSGFLKTACISV-AAAAFFFLRFDHRRAVAVAVPVAPET 120

Query: 121 TESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIEPN 180
           TESTDEST +EENESVVEEKPTDDL   E LRSLVEE VKSGKLPEA+E L+RLIE+EPN
Sbjct: 121 TESTDESTAYEENESVVEEKPTDDLNDVEALRSLVEEKVKSGKLPEAVEALNRLIELEPN 180

Query: 181 DRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKR 240
           D ELPLLRAN  SY G+LELAKNEFEEIL EDPFRVEAYHGL MV+EQLNDNSLKDV KR
Sbjct: 181 DLELPLLRANFHSYMGELELAKNEFEEILAEDPFRVEAYHGLAMVAEQLNDNSLKDVAKR 240

Query: 241 IEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCRGI 300
           IEEAMEKCKKQNDKS IRDFKLL+AQIKVM+GSYFDALKAY ELVREEP+DFRPYLC+GI
Sbjct: 241 IEEAMEKCKKQNDKSDIRDFKLLVAQIKVMEGSYFDALKAYQELVREEPRDFRPYLCQGI 300

Query: 301 IYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKAGLKS 356
           IYTLLRKN+EAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKE AGLKS
Sbjct: 301 IYTLLRKNEEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEGAGLKS 354

[Close]
BLAST of CmaCh03G004480 vs. TAIR 10
Match: AT2G37400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 292.4 bits (747), Expect = 5.1e-79
Identity = 179/355 (50.42%), Postives = 236/355 (66.48%), Query Frame = 0 

Query: 1   MESLPTVHHRHHPSQQLLSFSHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQS 60
           MESL  +     P+   LSF+H   SFPK  SS S    P  R  SSF+ +S+KASSS+ 
Sbjct: 1   MESLGKLQLHQQPNH--LSFTHFSSSFPKKPSSFSLRSLP--RSTSSFKCISIKASSSK- 60

Query: 61  TSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPV- 120
                S+++K SI            LK+ C+S  AAAA + +    +   A+A PVA   
Sbjct: 61  -----SQDSKLSI------------LKSTCVSFTAAAALFLVNLQLKPSPAIAAPVAATP 120

Query: 121 ---TTESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIE 180
              + + ++ +   EE E  +EE         E LRSL+E  +KS KL EAIE + RLIE
Sbjct: 121 LMESLKQSNGNVSFEEEERSLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIE 180

Query: 181 IEPNDRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKD 240
           +EP ++E P+L+ANI SY+G LE AK  FEEIL +DP RVEAYHGLVM      D+ L  
Sbjct: 181 LEPEEKEWPMLKANIFSYSGDLESAKTGFEEILVKDPLRVEAYHGLVMAYSDSGDD-LNA 240

Query: 241 VTKRIEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYL 300
           V KRIEEAM +CKK+ ++  +RDFKLL+AQI+V++G + +ALK Y+ELV+EEP+DFRPYL
Sbjct: 241 VEKRIEEAMVRCKKEKNRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYL 300

Query: 301 CRGIIYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKA 352
           C+GIIYT+L+K  EAEKQFEKFRRLVPKNHPY+EYF +NM A+KLFA+K+++E A
Sbjct: 301 CQGIIYTVLKKENEAEKQFEKFRRLVPKNHPYREYFMDNMVASKLFAEKVQREMA 332

[Close]
BLAST of CmaCh03G004480 vs. TAIR 10
Match: AT3G53560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 271.6 bits (693), Expect = 9.2e-73
Identity = 166/352 (47.16%), Postives = 230/352 (65.34%), Query Frame = 0 

Query: 1   MESLPTVHHRHHPSQQLLSFSHRLPS-FPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQ 60
           MESL  +   H P    LSF+H   S FPK +   S          SS +S S+KASSS+
Sbjct: 1   MESLGKLQLHHQPFH--LSFTHTSSSTFPKNLFKSSIQPI------SSLKSASIKASSSK 60

Query: 61  STSDEPSRNAKSSISETTNGGLLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVPVAPV 120
                  +N+ + + ++T   L     K+ CI++  AAA       H +  A+A P+AP 
Sbjct: 61  ------FQNSITPLPKSTPFRL----FKSTCITLTTAAALLLANL-HLKSPAIAAPIAPP 120

Query: 121 TTESTDESTVHEENESVVEEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIEP 180
            +  + E+   EE E  ++E         + LRSL+E  +KS KL EA+E + RLI++EP
Sbjct: 121 PSVESKENVTLEEEERALDEHLITHPSDVDALRSLMEVKIKSRKLTEAVEVIDRLIKLEP 180

Query: 181 NDRELPLLRANIRSYAGQLELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTK 240
            ++E P+L+ANI +Y+G L+LAK  FEEIL +DP RVEAYHGL+M         LK+V  
Sbjct: 181 EEKEWPVLKANIFTYSGDLDLAKTGFEEILAKDPLRVEAYHGLLMAYSDAG-LDLKEVES 240

Query: 241 RIEEAMEKCKKQNDKSVIRDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCRG 300
           RIEEAM KCKK+N+++  RDFKLL+AQI+V++G + +ALK Y ELV+EEP+DFRPYLC+G
Sbjct: 241 RIEEAMLKCKKENNQNDFRDFKLLVAQIRVIEGKHSEALKLYQELVKEEPRDFRPYLCQG 300

Query: 301 IIYTLLRKNKEAEKQFEKFRRLVPKNHPYKEYFDENMFATKLFAQKLEKEKA 352
           IIYTLL+K  +AE+QF+ FR+LVPKNHPY+EYF +NM ATKLF++K ++E A
Sbjct: 301 IIYTLLKKKDKAEEQFDNFRKLVPKNHPYREYFMDNMIATKLFSEKAQREMA 332

[Close]
BLAST of CmaCh03G004480 vs. TAIR 10
Match: AT5G02590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 225.7 bits (574), Expect = 5.8e-59
Identity = 141/328 (42.99%), Postives = 204/328 (62.20%), Query Frame = 0 

Query: 21  SHRLPSFPKPISSLSFAHTPPTRLRSSFRSLSVKASSSQSTSDEPSRNAKSSISETTNGG 80
           +HR P  PKP+S       PP+R         V  +SS S++ +PS    + ++ TT   
Sbjct: 20  THRKPQ-PKPVSYRILHKPPPSR---------VIRASSFSSNPKPSFLKTTCVTLTTAAA 79

Query: 81  LLSGFLKTACISVAAAAAFYFLRFDHRRVVAVAVP---VAPVTTESTDESTVHEENESVV 140
           LLS  L  +   V AA            +V+   P    A +T++        EE E+ +
Sbjct: 80  LLSASLHLSTKPVTAAT-----------LVSPPPPPSTAADLTSDQISSRPKEEEEEAAL 139

Query: 141 EEKPTDDLRGAETLRSLVEENVKSGKLPEAIETLSRLIEIEPNDRELPLLRANIRSYAGQ 200
           E+  T +    E L+SL++   ++  +  A+E L+RLIEI+P ++E  +L+A +++Y G 
Sbjct: 140 EKHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNRLIEIQPEEQEWRILKAQVQTYGGD 199

Query: 201 LELAKNEFEEILREDPFRVEAYHGLVMVSEQLNDNSLKDVTKRIEEAMEKCKKQNDKSVI 260
            + A   FEE+L +DPFRVEAYHGLVM   + +++ L ++  RI EA+EKCKK+N K   
Sbjct: 200 FDSATKGFEEVLSKDPFRVEAYHGLVMAYSE-SESKLSEIESRINEAIEKCKKENKKD-F 259

Query: 261 RDFKLLLAQIKVMKGSYFDALKAYDELVREEPKDFRPYLCRGIIYTLLRKNKEAEKQFEK 320
           RDF LL+AQI+V+KG+  +AL+ Y ELV++EPKDFRPYLC+G+IYTL++K  EAEKQF +
Sbjct: 260 RDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKDFRPYLCQGLIYTLMKKKDEAEKQFAE 319

Query: 321 FRRLVPKNHPYKEYFDENMFAT-KLFAQ 345
           FRRLVP+NHPYKEY D N+  T KLFA+
Sbjct: 320 FRRLVPENHPYKEYLDANVLNTNKLFAK 324

[Close]
BLAST of CmaCh03G004480 vs. TAIR 10
Match: AT3G09490.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 157.1 bits (396), Expect = 2.5e-38
Identity = 114/303 (37.62%), Postives = 163/303 (53.80%), Query Frame = 0 

Query: 29  KPISSLSFAHTPPTRLRSSFRSLSVKASSSQSTSDEPSRNAKSSISETTNGGLLSGFLKT 88
           K  S LSF    P   R   +S  ++    +++S   + N K S+            LKT
Sbjct: 24  KSPSKLSF----PLLFRDQAKSTPIRFPVIRASSSSSASNHKPSL------------LKT 83

Query: 89  ACISVAAAAAFYFLRFDHRRVVAVAVPVAPVTTESTDESTVHEENESVVEEKPTDDLRGA 148
             IS+ AAAA +   F      A   PVA V  E+T E  +  ++  V            
Sbjct: 84  TFISLTAAAALFSASFYFVNKRAAMTPVAVV--ETTLEKHLETQSNDV------------ 143

Query: 149 ETLRSLVEENVKSGKLPEAIETLSRLIEIEPNDRELPLLRANIRSYAGQLELAKNEFEEI 208
             L  L E   KS K  +AI  L RLIEIEP +R+ P ++A I SY G+ E A   FEEI
Sbjct: 144 NALSLLTEIKFKSDKHEQAIVFLDRLIEIEPYERKWPAMKARILSYHGKSESAIEAFEEI 203

Query: 209 LREDPFRVEAYHGLVMVSEQLNDN-SLKDVTKRIEEAMEKCKKQNDKSVIRDFKLLLAQI 268
           L +DP RV+AYH LVM  E  N    L ++ KRI + + +CKK+     I  F++L+AQI
Sbjct: 204 LEKDPIRVDAYHYLVM--EYYNSKPKLTEIEKRINKVIRRCKKEKKTKEILGFRMLIAQI 263

Query: 269 KVMKGSYFDALKAYDELVREEPKDFRPYLCRGIIYTLLRKNKEAEKQFEKFRRLVPKNHP 328
           + ++G   +A++  +ELV+E+P DF  YL +G++YTL+ K +EA KQFE   R++P+NHP
Sbjct: 264 RFIEGKSVEAIRICEELVKEDPNDFTIYLFQGVVYTLMNKGEEAAKQFEHVARVIPRNHP 294

Query: 329 YKE 331
            +E
Sbjct: 324 SRE 294

[Close]
BLAST of CmaCh03G004480 vs. TAIR 10
Match: AT4G39470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 136.0 bits (341), Expect = 6.1e-32
Identity = 78/249 (31.33%), Postives = 148/249 (59.44%), Query Frame = 0 

Query: 92  SVAAAAAFYFLRFDHRRVVAVAVPVAPVTTESTDESTVHEENESVVEEKPTDDLRGAETL 151
           ++    +F FL F   +  A+A+P A V +++        E+E + E+   ++    E +
Sbjct: 84  AILLVGSFVFLGFCSSK-PALALPTATVVSQA------ELEDEKMFEKLLENEPENMEAM 143

Query: 152 RSLVEENVKSGKLPEAIETLSRLIEIEPNDRELPLLRANIRSYAGQLELAKNEFEEILRE 211
           +++V + ++ GK  +A++ + +L+++EP++ E  LL A      G+L  AK  +++IL+E
Sbjct: 144 KAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEALCYETMGELSKAKRLYKDILKE 203

Query: 212 DPFRVEAYHGLVMVSEQLNDNSLKDVTKRIEEAMEKCKKQNDKSVIRDFKLLLAQIKVMK 271
            P  + A HGL MV  + +D S+ D+   + EAME  ++ N  +  R+ ++L+ Q+ +++
Sbjct: 204 QPLLIRALHGLAMVMHKTHDTSVFDM---LIEAMEVARQGNRVTEERNIQVLIGQMHIVE 263

Query: 272 GSYFDALKAYDELVREEPKDFRPYLCRGIIYTLLRKNKEAEKQFEKFRRLVPKNHPYKEY 331
           G + + LK + ++V + P+DFRPYLC+GI+Y+L+ K +EA +QFE +  LVP   P K +
Sbjct: 264 GQFEEGLKIFQQMVNDNPRDFRPYLCQGIVYSLMDKKEEAAQQFEIYWSLVPGEFPQKGF 322

Query: 332 FDENMFATK 341
            D+   A +
Sbjct: 324 LDDVALAAQ 322

The following BLAST results are available for this feature:
BLAST of CmaCh03G004480 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LS482.6e-2730.97protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 ... [more]
F8RP111.8e-0429.33Hsp70-Hsp90 organizing protein OS=Triticum aestivum OX=4565 GN=HOP PE=1 SV=1[more]
Q54DA83.1e-0425.39Protein STIP1 homolog OS=Dictyostelium discoideum OX=44689 GN=sti1 PE=3 SV=1[more]
Q587418.9e-0427.60TPR repeat-containing protein MJ1345 OS=Methanocaldococcus jannaschii (strain AT... [more]
BLAST of CmaCh03G004480 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1IQW21.2e-189100.00protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11147... [more]
A0A6J1GF653.8e-18396.62protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1HFV13.5e-14480.11protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111... [more]
A0A6J1I5P21.1e-14279.55protein SLOW GREEN 1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC11147... [more]
A0A5A7TWQ72.9e-13877.12Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908... [more]
BLAST of CmaCh03G004480 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022977249.12.5e-189100.00protein SLOW GREEN 1, chloroplastic-like [Cucurbita maxima][more]
XP_023545038.19.3e-18496.62protein SLOW GREEN 1, chloroplastic-like [Cucurbita pepo subsp. pepo][more]
XP_022950245.17.9e-18396.62protein SLOW GREEN 1, chloroplastic-like [Cucurbita moschata][more]
KAG6603680.14.3e-18196.06protein SLOW GREEN 1, chloroplastic, partial [Cucurbita argyrosperma subsp. soro... [more]
XP_038883735.17.2e-16086.76protein SLOW GREEN 1, chloroplastic-like [Benincasa hispida][more]
BLAST of CmaCh03G004480 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G37400.15.1e-7950.42Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G53560.19.2e-7347.16Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT5G02590.15.8e-5942.99Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT3G09490.12.5e-3837.62Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G39470.16.1e-3231.33Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 191..211
NoneNo IPR availableCOILSCoilCoilcoord: 234..254
NoneNo IPR availablePFAMPF14559TPR_19coord: 160..222
e-value: 7.5E-6
score: 26.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..144
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..144
NoneNo IPR availablePANTHERPTHR26312:SF146TETRATRICOPEPTIDE-LIKE HELICAL DOMAIN-CONTAINING PROTEIN-RELATEDcoord: 1..347
NoneNo IPR availablePANTHERPTHR26312TETRATRICOPEPTIDE REPEAT PROTEIN 5coord: 1..347
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 258..291
e-value: 120.0
score: 5.6
coord: 292..325
e-value: 11.0
score: 14.6
coord: 148..181
e-value: 22.0
score: 11.9
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 148..181
score: 9.0274
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 257..340
e-value: 9.8E-9
score: 36.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 134..256
e-value: 2.1E-12
score: 49.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 151..325

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G004480.1CmaCh03G004480.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding