CmaCh03G004190 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G004190
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like
Location	Cma_Chr03: 4489758 .. 4491569 (+)
RNA-Seq Expression	CmaCh03G004190
Synteny	CmaCh03G004190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TACGACGCATAAACAAATACTAAAATTAAAATATTATTCTCAAACTCCTCGAATCCTACCTCTCCTCCCACTCCCCCACTTTCCTTTTATTTATCGACGCCATCCAAACCAGATGCCTCTGGTTCTTGCCTTCCTCCCATTTCCATCTCTCTTTCTTCTCCGACGATGGACCAAAAGAACCACCCCCGCCATCATCCATCTCACGGTGGCACTCACAGGTACGTCCTACATCTTTCTCAACCTTTCTCTCTGCTTTGGCCGCCATGGCTGTCTGTGAACCAAGCTGATGCAAAACATATTGAAAGGAAACACAGATCTTGAAGCTTCTGCCTTTATTGGCAGTTTCTTAATGGGTTGAGTTCTGGGTTTGTTTGTTTATTAGAAGTTTCACTCTCTCTTCTCTGTTTTCTGCATGTTGATTGTGTTTTGATGGGGAGCTTTGATCTTTTAGGGGGAAAATTGGCTTCCTATGCATAATCTAACTTATAATCATGGTTTTCTAGTGGCCTGGCCTGGCTGATAATCATGGTTTCAGTGCCTTTTTTGGGTAGGGATTTGATGCCTTGTCTATCTCTTAGAAATTTAGATATTTTAATGATTGGATATTTGGGATTTTATTTTCTTCTATTTATAGTTTTTGATCCTTACAAAAGCCCTGATCAGATTTAAAAAAACGACAAAATCATTATCTAAGGGTTTCTTCAATTTCCAAGATAGAGAACAAACATAGAACTTTAGATCAGCGCTAAAATACTATGCAATGAAACTTGTCATTATTGTAATTAAACCGACCTCAATTGGACGTACTAAGAAAAATTCAAATTCTTGCAGCTTCTCTGGGTTTCAACCATGGGATACTGAAAGCTTTGATGTAAAGAAGAAAAGAAAACTACTGTTTGAGCAACTAAGTTTACCCACACCTAAGCTACCATGTTGGGGTCCAAGTTCAAGTTCGATTAGCTTTCCCTATGGAGAAGATAGCTTCAAGTTCAACAAAAAACGCCCAAAAGAAGAAGGAGAAAGCAGCCTTACAAAAATGGCATCCACAGAAGAGGTTCGAATACAGGGTGAGAAAGATGGTATCAAAGATAAGTTGGACCTAAACTATGGCCATGAGGAAGATCTATTGGAATTTGGAAGCCATGGAAATTCCAGCATTTATGAGCAATGTTGCAGTGACAGTACTCAAAATTTGCTCCTCCCCACAGACTCCAATCATGACTTTTTTGTTTTGTCATCTGGGAGATGGAGCATAGACCCAGGTATTGAAATTCTCAGTTCATCTTTGCATGTTATATAACGATTTAAATGAAGTAAGTGACAAAGTTCAACGATGGAATTAAGATTTAACCAGAGATCAAAACGGTTCAAGAGATGACACCAGGGATCATAGGATTTCTTTTTTTTTTTTTTTTTCGTTTCTTTTTTCACAAAATTTGTGATGTTGGGTGAGTTTTATATTTTTTTCCATACACAAATTAGATCTGAATCATTCAAATATGCAGAGGCAGAGTCCAAGATTATGTCACCAGCCATTGATCAAGAGTTTGAGCAATACTTTTCTGGGGTTTTGCCATCCCTGGATCCCTGATGATTAACATCTTGAATCTCTATATCCACTTTCAATGAATTTGAAGTGTGCGTGTGCGTTAGCTTGTTCTTTAAGATGAAAGAATTTCAGCAAGTGTAATACAATTCAATTCAAGTGATGTGTGCAAATGAGATTCTACAGAACTGGTTTATGCAATCCAATTATTTGGTCTAACAGTTCCAAACTAATTCTCATTCACAACACATATATTGAAGTTTTGC

mRNA sequence

TACGACGCATAAACAAATACTAAAATTAAAATATTATTCTCAAACTCCTCGAATCCTACCTCTCCTCCCACTCCCCCACTTTCCTTTTATTTATCGACGCCATCCAAACCAGATGCCTCTGGTTCTTGCCTTCCTCCCATTTCCATCTCTCTTTCTTCTCCGACGATGGACCAAAAGAACCACCCCCGCCATCATCCATCTCACGGTGGCACTCACAGCTTCTCTGGGTTTCAACCATGGGATACTGAAAGCTTTGATGTAAAGAAGAAAAGAAAACTACTGTTTGAGCAACTAAGTTTACCCACACCTAAGCTACCATGTTGGGGTCCAAGTTCAAGTTCGATTAGCTTTCCCTATGGAGAAGATAGCTTCAAGTTCAACAAAAAACGCCCAAAAGAAGAAGGAGAAAGCAGCCTTACAAAAATGGCATCCACAGAAGAGGTTCGAATACAGGGTGAGAAAGATGGTATCAAAGATAAGTTGGACCTAAACTATGGCCATGAGGAAGATCTATTGGAATTTGGAAGCCATGGAAATTCCAGCATTTATGAGCAATGTTGCAGTGACAGTACTCAAAATTTGCTCCTCCCCACAGACTCCAATCATGACTTTTTTGTTTTGTCATCTGGGAGATGGAGCATAGACCCAGAGGCAGAGTCCAAGATTATGTCACCAGCCATTGATCAAGAGTTTGAGCAATACTTTTCTGGGGTTTTGCCATCCCTGGATCCCTGATGATTAACATCTTGAATCTCTATATCCACTTTCAATGAATTTGAAGTGTGCGTGTGCGTTAGCTTGTTCTTTAAGATGAAAGAATTTCAGCAAGTGTAATACAATTCAATTCAAGTGATGTGTGCAAATGAGATTCTACAGAACTGGTTTATGCAATCCAATTATTTGGTCTAACAGTTCCAAACTAATTCTCATTCACAACACATATATTGAAGTTTTGC

Coding sequence (CDS)

ATGGACCAAAAGAACCACCCCCGCCATCATCCATCTCACGGTGGCACTCACAGCTTCTCTGGGTTTCAACCATGGGATACTGAAAGCTTTGATGTAAAGAAGAAAAGAAAACTACTGTTTGAGCAACTAAGTTTACCCACACCTAAGCTACCATGTTGGGGTCCAAGTTCAAGTTCGATTAGCTTTCCCTATGGAGAAGATAGCTTCAAGTTCAACAAAAAACGCCCAAAAGAAGAAGGAGAAAGCAGCCTTACAAAAATGGCATCCACAGAAGAGGTTCGAATACAGGGTGAGAAAGATGGTATCAAAGATAAGTTGGACCTAAACTATGGCCATGAGGAAGATCTATTGGAATTTGGAAGCCATGGAAATTCCAGCATTTATGAGCAATGTTGCAGTGACAGTACTCAAAATTTGCTCCTCCCCACAGACTCCAATCATGACTTTTTTGTTTTGTCATCTGGGAGATGGAGCATAGACCCAGAGGCAGAGTCCAAGATTATGTCACCAGCCATTGATCAAGAGTTTGAGCAATACTTTTCTGGGGTTTTGCCATCCCTGGATCCCTGA

Protein sequence

MDQKNHPRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSISFPYGEDSFKFNKKRPKEEGESSLTKMASTEEVRIQGEKDGIKDKLDLNYGHEEDLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSNHDFFVLSSGRWSIDPEAESKIMSPAIDQEFEQYFSGVLPSLDP

Homology

[Close]

BLAST of CmaCh03G004190 vs. ExPASy Swiss-Prot
Match: A8MR65 (Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE OS=Arabidopsis thaliana OX=3702 GN=FHL PE=1 SV=1)

HSP 1 Score: 49.3 bits (116), Expect = 5.6e-05
Identity = 52/184 (28.26%), Postives = 80/184 (43.48%), Query Frame = 0


Query: 28  ESFDVKKKRKLLFEQLS-LPTPKLPCWGPSSSSIS-------FPYGEDSFKFNKKRPKEE 87
           ES D  KKRKL  E+   LP PK  C    +S ++         Y E S+     +  +E
Sbjct: 26  ESLDTSKKRKLHAEESDLLPLPKHFCSEHQASLVNSSCPSSVIDYAECSYAMENTKTSDE 85

Query: 88  GESSLTKMASTEEVRIQGEKDGIKDKLDLNYGH-----------------EEDLLEFGSH 147
             SS    AS     +   KD I      + G+                 +ED  +F +H
Sbjct: 86  ASSS----ASFTGPSLYMFKDSIYSTGSSSSGYAATSSIEQCFSKVDHKTQEDTQDF-TH 145

Query: 148 GNSSIYE-QCCSDSTQNLLLPTDSNHDFFVLSSGRWSI-DPEAESKIMSPAIDQEFEQYF 185
                ++ +   +  Q +L P +S    ++LSS RWS+ + +++     P IDQEFEQYF
Sbjct: 146 MEFIYHDSEFAVEDLQEVLNPVES----YILSSARWSVSNQDSKEATTKPTIDQEFEQYF 200

[Close]

BLAST of CmaCh03G004190 vs. ExPASy Swiss-Prot
Match: Q8S4Q6 (Protein FAR-RED ELONGATED HYPOCOTYL 1 OS=Arabidopsis thaliana OX=3702 GN=FHY1 PE=1 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.6e-04
Identity = 46/172 (26.74%), Postives = 72/172 (41.86%), Query Frame = 0


Query: 28  ESFDVKKKRKLLFEQLS----LPTPKLPCWGPSSSSISFPYGEDSFKFNKKRPKEEGESS 87
           E  +V KKRK   +Q      LP  K  C+   + S +      + + + +       +S
Sbjct: 34  EEVEVSKKRKFQTDQSDELSLLPLSKHTCFANVACSEN---TNGNSEIDTEYSMSSYVNS 93

Query: 88  LTKMASTEEVRIQGEKDG---------IKDKLDLNYGHEEDLLEFGSHGNSSIYEQCCSD 147
            T M    ++ ++ E  G          +  LD  YG  ++L +F      +I      +
Sbjct: 94  TTSMECNNDIEMKEESSGSCGEDKMISFESHLDYIYG-TQNLEDFSEKVIENILYLDEQE 153

Query: 148 STQNLLLPTDSNHDFFVLSSGRWSI--DPEAESKIMSPAIDQEFEQYFSGVL 185
             +       SN   FVLSSGRW++  D     +   P IDQEFEQYFS ++
Sbjct: 154 EEEEDAKGCSSNAAKFVLSSGRWTVNQDDSTLHETKKPTIDQEFEQYFSTLM 201

[Close]

BLAST of CmaCh03G004190 vs. ExPASy TrEMBL
Match: A0A6J1IMA5 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita maxima OX=3661 GN=LOC111478324 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 2.6e-106
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MDQKNHPRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60
           MDQKNHPRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI
Sbjct: 1   MDQKNHPRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60

Query: 61  SFPYGEDSFKFNKKRPKEEGESSLTKMASTEEVRIQGEKDGIKDKLDLNYGHEEDLLEFG 120
           SFPYGEDSFKFNKKRPKEEGESSLTKMASTEEVRIQGEKDGIKDKLDLNYGHEEDLLEFG
Sbjct: 61  SFPYGEDSFKFNKKRPKEEGESSLTKMASTEEVRIQGEKDGIKDKLDLNYGHEEDLLEFG 120

Query: 121 SHGNSSIYEQCCSDSTQNLLLPTDSNHDFFVLSSGRWSIDPEAESKIMSPAIDQEFEQYF 180
           SHGNSSIYEQCCSDSTQNLLLPTDSNHDFFVLSSGRWSIDPEAESKIMSPAIDQEFEQYF
Sbjct: 121 SHGNSSIYEQCCSDSTQNLLLPTDSNHDFFVLSSGRWSIDPEAESKIMSPAIDQEFEQYF 180

Query: 181 SGVLPSLDP 190
           SGVLPSLDP
Sbjct: 181 SGVLPSLDP 189

[Close]

BLAST of CmaCh03G004190 vs. ExPASy TrEMBL
Match: A0A6J1GGJ6 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita moschata OX=3662 GN=LOC111453741 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.2e-96
Identity = 180/195 (92.31%), Postives = 183/195 (93.85%), Query Frame = 0


Query: 1   MDQKNHPRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60
           MDQKNHPRHHPSHGGTHSFS FQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI
Sbjct: 1   MDQKNHPRHHPSHGGTHSFSDFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60

Query: 61  SFPYGEDSFKFNKKRPKEEGESSLTKMA------STEEVRIQGEKDGIKDKLDLNYGHEE 120
           SFPYGEDSFKFNKKRPK EGESSLTKMA      STEEVRIQGEKDGIKDKLDLNYGHEE
Sbjct: 61  SFPYGEDSFKFNKKRPK-EGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEE 120

Query: 121 DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSNHDFFVLSSGRWSIDPEAESKIMSPAIDQ 180
           DLLEFGSHGNSSIYE  CSDSTQNLLLPTDSNHD FVLSSGRWSIDPEAESKI++P IDQ
Sbjct: 121 DLLEFGSHGNSSIYEHYCSDSTQNLLLPTDSNHD-FVLSSGRWSIDPEAESKIITPTIDQ 180

Query: 181 EFEQYFSGVLPSLDP 190
           EFEQYFSG+LPSLDP
Sbjct: 181 EFEQYFSGILPSLDP 193

[Close]

BLAST of CmaCh03G004190 vs. ExPASy TrEMBL
Match: A0A1S3BJU4 (uncharacterized protein LOC103490381 OS=Cucumis melo OX=3656 GN=LOC103490381 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.0e-54
Identity = 127/210 (60.48%), Postives = 147/210 (70.00%), Query Frame = 0


Query: 1   MDQKNHPRHHPSHGGT---------------HSFSGFQPWDTESFDVKKKRKLLFEQLSL 60
           MDQ N+  HHPS   T                 F GFQ W+TE+ DVKKKR+LL +QLSL
Sbjct: 1   MDQ-NNQHHHPSQFDTDRIINSPTSLDFETSSRFHGFQSWNTEAIDVKKKRRLLIDQLSL 60

Query: 61  PTPKLPCWGPSSSSISFPYGEDSFKFNKKRPKEEGESSLTKMA------STEEVRIQGEK 120
           PT KLPCWG  S SIS P+GED+FKFNKK PKE   S+LTK+       S E+VR+QGE 
Sbjct: 61  PTSKLPCWG--SRSISIPHGEDNFKFNKK-PKEGEGSTLTKITIKGKEMSEEQVRMQGE- 120

Query: 121 DGIKDKLDLNYGHEEDLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSNHDFFVLSSGRWSI 180
              KDKL  +YGHEEDLLEFG+ G+S IYE+CCS S Q+LLLPTDS  + FVLSSGRWS+
Sbjct: 121 ---KDKLQKSYGHEEDLLEFGTLGHSCIYEECCSGSAQSLLLPTDSKQN-FVLSSGRWSV 180

Query: 181 DPEAESKIMSPAIDQEFEQYFSGVLPSLDP 190
           D E ESK + P IDQEFEQYFS +LPSLDP
Sbjct: 181 DSETESKTVKPTIDQEFEQYFSVLLPSLDP 201

[Close]

BLAST of CmaCh03G004190 vs. ExPASy TrEMBL
Match: A0A0A0KZL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296180 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.1e-48
Identity = 123/224 (54.91%), Postives = 142/224 (63.39%), Query Frame = 0


Query: 1   MDQKNHPRHHPSHGGT---------------HSFSGFQPWDTESFDVKKKRKLLFEQLSL 60
           MDQ N   HHPSH  T                   G Q W+TE+ DVK KR+LL +QLSL
Sbjct: 1   MDQNNR-HHHPSHFDTDRIINRPTSVDFETPSRLHGCQSWNTEAVDVKNKRRLLIDQLSL 60

Query: 61  PTPKLPCWGPSSSSISFPYGEDSFKFN---KKRPKEEG----------ESSLTKMA---- 120
           PT KLP WGP   SIS P+GED+FKFN   ++  +EEG          ES+LTK+A    
Sbjct: 61  PTSKLPRWGP--RSISIPHGEDNFKFNDQPQEEEQEEGEGEGGEGEGEESTLTKIAIDKS 120

Query: 121 ---STEEVRIQGEKDGIKDKLDLNYGHEEDLLEFGSHGNSSIYEQCCSDSTQNLLLPTDS 180
              S E+VR+QG     KDKL  +YGHEEDLLEFGS     IYE+CCS S QNLLLPTDS
Sbjct: 121 KEMSEEQVRMQGG----KDKLQKSYGHEEDLLEFGSREYGCIYEECCSGSAQNLLLPTDS 180

Query: 181 NHDFFVLSSGRWSIDPEAESKIMSPAIDQEFEQYFSGVLPSLDP 190
             + FVLSSGRWS+D E ESK + P IDQEFEQYFS +LPSLDP
Sbjct: 181 KQN-FVLSSGRWSVDTETESKPIKPTIDQEFEQYFSVLLPSLDP 216

[Close]

BLAST of CmaCh03G004190 vs. ExPASy TrEMBL
Match: A0A6J1CPJ7 (uncharacterized protein LOC111013556 OS=Momordica charantia OX=3673 GN=LOC111013556 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.7e-36
Identity = 102/183 (55.74%), Postives = 120/183 (65.57%), Query Frame = 0


Query: 9   HHPSHGGTHSFSGFQPWDTESFDVKKKRKLL--FEQLSLPTPKLPCWGPSSSSISFPYGE 68
           HHPSH  T SF GFQPW+T  FDVKKKRKLL   EQLS PTPKLP WGP + S+SFPYG 
Sbjct: 6   HHPSHSSTDSFPGFQPWNTGGFDVKKKRKLLIELEQLSFPTPKLPRWGP-TPSVSFPYG- 65

Query: 69  DSFKFNKKRPK--EEGESSLTKMASTEEVRIQGEKDGIKDK-LDLNYGHEEDLLEFGSHG 128
            +FKFN+   K  EE E +LTK A   EV+   + + + +  L ++YGH EDLLEFGS  
Sbjct: 66  GNFKFNQNPQKDVEEEEINLTKRAM--EVKEISKLEALMESGLHISYGHGEDLLEFGSTD 125

Query: 129 NSSIYEQCCSDSTQNLLLPTDSNHDFFVLSSGRWSIDP--EAESKIMSPAIDQEFEQYFS 185
                E+C            DS HD FVLSSGRW++DP  EAESK + P IDQEFEQYFS
Sbjct: 126 -----EECY----------RDSKHD-FVLSSGRWNVDPPSEAESKTLKPTIDQEFEQYFS 168

[Close]

BLAST of CmaCh03G004190 vs. NCBI nr
Match: XP_022978296.1 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita maxima])

HSP 1 Score: 394.4 bits (1012), Expect = 5.4e-106
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MDQKNHPRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60
           MDQKNHPRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI
Sbjct: 1   MDQKNHPRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60

Query: 61  SFPYGEDSFKFNKKRPKEEGESSLTKMASTEEVRIQGEKDGIKDKLDLNYGHEEDLLEFG 120
           SFPYGEDSFKFNKKRPKEEGESSLTKMASTEEVRIQGEKDGIKDKLDLNYGHEEDLLEFG
Sbjct: 61  SFPYGEDSFKFNKKRPKEEGESSLTKMASTEEVRIQGEKDGIKDKLDLNYGHEEDLLEFG 120

Query: 121 SHGNSSIYEQCCSDSTQNLLLPTDSNHDFFVLSSGRWSIDPEAESKIMSPAIDQEFEQYF 180
           SHGNSSIYEQCCSDSTQNLLLPTDSNHDFFVLSSGRWSIDPEAESKIMSPAIDQEFEQYF
Sbjct: 121 SHGNSSIYEQCCSDSTQNLLLPTDSNHDFFVLSSGRWSIDPEAESKIMSPAIDQEFEQYF 180

Query: 181 SGVLPSLDP 190
           SGVLPSLDP
Sbjct: 181 SGVLPSLDP 189

[Close]

BLAST of CmaCh03G004190 vs. NCBI nr
Match: KAG6603645.1 (Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 370.9 bits (951), Expect = 6.4e-99
Identity = 182/195 (93.33%), Postives = 185/195 (94.87%), Query Frame = 0


Query: 1   MDQKNHPRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60
           MDQKNH RHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI
Sbjct: 61  MDQKNHTRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 120

Query: 61  SFPYGEDSFKFNKKRPKEEGESSLTKMA------STEEVRIQGEKDGIKDKLDLNYGHEE 120
           SFPYGEDSFKFNKKRPKEEGESSLTKMA      STEEVRIQGEKDGIKDKLDLNYGHEE
Sbjct: 121 SFPYGEDSFKFNKKRPKEEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEE 180

Query: 121 DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSNHDFFVLSSGRWSIDPEAESKIMSPAIDQ 180
           DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDS HD FVLSSGRWSIDPEAESKI++P IDQ
Sbjct: 181 DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHD-FVLSSGRWSIDPEAESKIITPTIDQ 240

Query: 181 EFEQYFSGVLPSLDP 190
           EFEQYFSG+LPSLDP
Sbjct: 241 EFEQYFSGILPSLDP 254

[Close]

BLAST of CmaCh03G004190 vs. NCBI nr
Match: KAG7033829.1 (hypothetical protein SDJN02_03554, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 368.6 bits (945), Expect = 3.2e-98
Identity = 181/195 (92.82%), Postives = 184/195 (94.36%), Query Frame = 0


Query: 1   MDQKNHPRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60
           MDQKNH RHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI
Sbjct: 1   MDQKNHTRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60

Query: 61  SFPYGEDSFKFNKKRPKEEGESSLTKMA------STEEVRIQGEKDGIKDKLDLNYGHEE 120
           SFPYGEDS KFNKKRPKEEGESSLTKMA      STEEVRIQGEKDGIKDKLDLNYGHEE
Sbjct: 61  SFPYGEDSLKFNKKRPKEEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEE 120

Query: 121 DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSNHDFFVLSSGRWSIDPEAESKIMSPAIDQ 180
           DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDS HD FVLSSGRWSIDPEAESKI++P IDQ
Sbjct: 121 DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSKHD-FVLSSGRWSIDPEAESKIITPTIDQ 180

Query: 181 EFEQYFSGVLPSLDP 190
           EFEQYFSG+LPSLDP
Sbjct: 181 EFEQYFSGILPSLDP 194

[Close]

BLAST of CmaCh03G004190 vs. NCBI nr
Match: XP_022950730.1 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita moschata])

HSP 1 Score: 360.9 bits (925), Expect = 6.6e-96
Identity = 180/195 (92.31%), Postives = 183/195 (93.85%), Query Frame = 0


Query: 1   MDQKNHPRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60
           MDQKNHPRHHPSHGGTHSFS FQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI
Sbjct: 1   MDQKNHPRHHPSHGGTHSFSDFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60

Query: 61  SFPYGEDSFKFNKKRPKEEGESSLTKMA------STEEVRIQGEKDGIKDKLDLNYGHEE 120
           SFPYGEDSFKFNKKRPK EGESSLTKMA      STEEVRIQGEKDGIKDKLDLNYGHEE
Sbjct: 61  SFPYGEDSFKFNKKRPK-EGESSLTKMATEGKDMSTEEVRIQGEKDGIKDKLDLNYGHEE 120

Query: 121 DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSNHDFFVLSSGRWSIDPEAESKIMSPAIDQ 180
           DLLEFGSHGNSSIYE  CSDSTQNLLLPTDSNHD FVLSSGRWSIDPEAESKI++P IDQ
Sbjct: 121 DLLEFGSHGNSSIYEHYCSDSTQNLLLPTDSNHD-FVLSSGRWSIDPEAESKIITPTIDQ 180

Query: 181 EFEQYFSGVLPSLDP 190
           EFEQYFSG+LPSLDP
Sbjct: 181 EFEQYFSGILPSLDP 193

[Close]

BLAST of CmaCh03G004190 vs. NCBI nr
Match: XP_023544624.1 (protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 359.4 bits (921), Expect = 1.9e-95
Identity = 178/195 (91.28%), Postives = 182/195 (93.33%), Query Frame = 0


Query: 1   MDQKNHPRHHPSHGGTHSFSGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60
           MDQKNH RHHPSHGGTHSF GFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI
Sbjct: 1   MDQKNHSRHHPSHGGTHSFPGFQPWDTESFDVKKKRKLLFEQLSLPTPKLPCWGPSSSSI 60

Query: 61  SFPYGEDSFKFNKKRPKEEGESSLTKMA------STEEVRIQGEKDGIKDKLDLNYGHEE 120
           SFPYGEDSFKFNKKRPKEEGESSLTKMA      STEEVRIQGEKDGIKD LDLNYGHEE
Sbjct: 61  SFPYGEDSFKFNKKRPKEEGESSLTKMATEGKDMSTEEVRIQGEKDGIKDNLDLNYGHEE 120

Query: 121 DLLEFGSHGNSSIYEQCCSDSTQNLLLPTDSNHDFFVLSSGRWSIDPEAESKIMSPAIDQ 180
           DLLEFG+HGNSSIYEQCCSDSTQNLLLPTDS HD FVLSSGRWSIDPEAESKI++P IDQ
Sbjct: 121 DLLEFGNHGNSSIYEQCCSDSTQNLLLPTDSKHD-FVLSSGRWSIDPEAESKIITPTIDQ 180

Query: 181 EFEQYFSGVLPSLDP 190
           EFEQYFSG+LP LDP
Sbjct: 181 EFEQYFSGILP-LDP 193

[Close]

BLAST of CmaCh03G004190 vs. TAIR 10
Match: AT5G02200.1 (far-red-elongated hypocotyl1-like )

HSP 1 Score: 49.3 bits (116), Expect = 4.0e-06
Identity = 52/184 (28.26%), Postives = 80/184 (43.48%), Query Frame = 0


Query: 28  ESFDVKKKRKLLFEQLS-LPTPKLPCWGPSSSSIS-------FPYGEDSFKFNKKRPKEE 87
           ES D  KKRKL  E+   LP PK  C    +S ++         Y E S+     +  +E
Sbjct: 6   ESLDTSKKRKLHAEESDLLPLPKHFCSEHQASLVNSSCPSSVIDYAECSYAMENTKTSDE 65

Query: 88  GESSLTKMASTEEVRIQGEKDGIKDKLDLNYGH-----------------EEDLLEFGSH 147
             SS    AS     +   KD I      + G+                 +ED  +F +H
Sbjct: 66  ASSS----ASFTGPSLYMFKDSIYSTGSSSSGYAATSSIEQCFSKVDHKTQEDTQDF-TH 125

Query: 148 GNSSIYE-QCCSDSTQNLLLPTDSNHDFFVLSSGRWSI-DPEAESKIMSPAIDQEFEQYF 185
                ++ +   +  Q +L P +S    ++LSS RWS+ + +++     P IDQEFEQYF
Sbjct: 126 MEFIYHDSEFAVEDLQEVLNPVES----YILSSARWSVSNQDSKEATTKPTIDQEFEQYF 180

[Close]

BLAST of CmaCh03G004190 vs. TAIR 10
Match: AT5G02200.2 (far-red-elongated hypocotyl1-like )

HSP 1 Score: 49.3 bits (116), Expect = 4.0e-06
Identity = 52/184 (28.26%), Postives = 80/184 (43.48%), Query Frame = 0


Query: 28  ESFDVKKKRKLLFEQLS-LPTPKLPCWGPSSSSIS-------FPYGEDSFKFNKKRPKEE 87
           ES D  KKRKL  E+   LP PK  C    +S ++         Y E S+     +  +E
Sbjct: 26  ESLDTSKKRKLHAEESDLLPLPKHFCSEHQASLVNSSCPSSVIDYAECSYAMENTKTSDE 85

Query: 88  GESSLTKMASTEEVRIQGEKDGIKDKLDLNYGH-----------------EEDLLEFGSH 147
             SS    AS     +   KD I      + G+                 +ED  +F +H
Sbjct: 86  ASSS----ASFTGPSLYMFKDSIYSTGSSSSGYAATSSIEQCFSKVDHKTQEDTQDF-TH 145

Query: 148 GNSSIYE-QCCSDSTQNLLLPTDSNHDFFVLSSGRWSI-DPEAESKIMSPAIDQEFEQYF 185
                ++ +   +  Q +L P +S    ++LSS RWS+ + +++     P IDQEFEQYF
Sbjct: 146 MEFIYHDSEFAVEDLQEVLNPVES----YILSSARWSVSNQDSKEATTKPTIDQEFEQYF 200

[Close]

BLAST of CmaCh03G004190 vs. TAIR 10
Match: AT2G37678.1 (far-red elongated hypocotyl 1 )

HSP 1 Score: 46.6 bits (109), Expect = 2.6e-05
Identity = 46/172 (26.74%), Postives = 72/172 (41.86%), Query Frame = 0


Query: 28  ESFDVKKKRKLLFEQLS----LPTPKLPCWGPSSSSISFPYGEDSFKFNKKRPKEEGESS 87
           E  +V KKRK   +Q      LP  K  C+   + S +      + + + +       +S
Sbjct: 34  EEVEVSKKRKFQTDQSDELSLLPLSKHTCFANVACSEN---TNGNSEIDTEYSMSSYVNS 93

Query: 88  LTKMASTEEVRIQGEKDG---------IKDKLDLNYGHEEDLLEFGSHGNSSIYEQCCSD 147
            T M    ++ ++ E  G          +  LD  YG  ++L +F      +I      +
Sbjct: 94  TTSMECNNDIEMKEESSGSCGEDKMISFESHLDYIYG-TQNLEDFSEKVIENILYLDEQE 153

Query: 148 STQNLLLPTDSNHDFFVLSSGRWSI--DPEAESKIMSPAIDQEFEQYFSGVL 185
             +       SN   FVLSSGRW++  D     +   P IDQEFEQYFS ++
Sbjct: 154 EEEEDAKGCSSNAAKFVLSSGRWTVNQDDSTLHETKKPTIDQEFEQYFSTLM 201

The following BLAST results are available for this feature:

BLAST of CmaCh03G004190 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A8MR65	5.6e-05	28.26	Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE OS=Arabidopsis thaliana OX=3702 GN=FH...	[more]
Q8S4Q6	3.6e-04	26.74	Protein FAR-RED ELONGATED HYPOCOTYL 1 OS=Arabidopsis thaliana OX=3702 GN=FHY1 PE...	[more]

BLAST of CmaCh03G004190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IMA5	2.6e-106	100.00	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GGJ6	3.2e-96	92.31	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A1S3BJU4	1.0e-54	60.48	uncharacterized protein LOC103490381 OS=Cucumis melo OX=3656 GN=LOC103490381 PE=...	[more]
A0A0A0KZL8	1.1e-48	54.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296180 PE=4 SV=1	[more]
A0A6J1CPJ7	1.7e-36	55.74	uncharacterized protein LOC111013556 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]

BLAST of CmaCh03G004190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978296.1	5.4e-106	100.00	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita maxima]	[more]
KAG6603645.1	6.4e-99	93.33	Protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE protein, partial [Cucurbita argyrospe...	[more]
KAG7033829.1	3.2e-98	92.82	hypothetical protein SDJN02_03554, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022950730.1	6.6e-96	92.31	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita moschata]	[more]
XP_023544624.1	1.9e-95	91.28	protein FAR-RED-ELONGATED HYPOCOTYL 1-LIKE-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh03G004190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02200.1	4.0e-06	28.26	far-red-elongated hypocotyl1-like	[more]
AT5G02200.2	4.0e-06	28.26	far-red-elongated hypocotyl1-like	[more]
AT2G37678.1	2.6e-05	26.74	far-red elongated hypocotyl 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	PANTHER	PTHR37723:SF1	PROTEIN FAR-RED ELONGATED HYPOCOTYL 1	coord: 83..181 coord: 11..104
IPR037766	Protein FAR-RED ELONGATED HYPOCOTYL 1	PANTHER	PTHR37723	PROTEIN FAR-RED ELONGATED HYPOCOTYL 1	coord: 83..181
IPR037766	Protein FAR-RED ELONGATED HYPOCOTYL 1	PANTHER	PTHR37723	PROTEIN FAR-RED ELONGATED HYPOCOTYL 1	coord: 11..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G004190.1	CmaCh03G004190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009639	response to red or far red light
cellular_component	GO:0005622	intracellular anatomical structure