CmaCh03G004030 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh03G004030
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionUnknown protein
LocationCma_Chr03: 4440041 .. 4440983 (+)
RNA-Seq ExpressionCmaCh03G004030
SyntenyCmaCh03G004030
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGACAGAGGGTGGCAGTAACGGCGAAGGAGGTGCTCATTTCGGCGGTGCTGCCCATGGTGGAGGATTGCATCATGGACATGCCGGCCTACACCATGGACATGGTGGGGTACACCTCGCAGGGGCCCATTTTGGAGGTGGAGGAGACGGCGGCGGCGGCGGTGGTGGTGGTGGCTGTTGACGTTAATTCTTTCCTTCAGAGGTGGGCGTATATATATATATATATATGATTAATTAGGTGTCAATTTCTCCTTGTACAATTGGATATGTTGGTAGTTCTCTTCTTTGTATGTAAATTAAATTTTTGTGTGTTAAACTATAATAAATTCTAAAAATTATAGTTTAGAGATTATAATATGAACTTATCAACGACTTCAAATTATATTCGTATGGTATGAATGACTTAGTGAATTAAATGGCTTAGCTTATTTTGGAAGTTGGTGATTTGAATTAGAATATAATTTTTTAGAATTGAATGTATATAGTTTATAAAACAATTGAGTTTACGTGTAAGATGCAACTCTTTGGAAATTTCAACACCACAGTTATTAAACCCATAATTCAATTATAAAAAGTTGAAAATCCATATTGCAATTCAAGCTTCAAGTTCATACCAAAAATGGTTGATCGGACCACTGTTATAGTAATTGTGGCATTCGTTTCCTTTGCTATTGTTGGCGTCTTCTTGCAGTTCCTCTGCAGGGGTGGTGATGGCTCCGAAGGTGGCACCGGCGTTCAACTAGAACTAGGAGGTGGGGGTTGTGGCGGTGGGGGTGGTGGNNNNNNNNNNNNNNNNNNNTGGGGGCTGTGGCGGCGGTGGGGGTGGTGGTGATGGGGGTTGTGGCGACGGTGGTGGGGGCTGTGGCGGCGGAGGCGGCTGTGGCGATTGATGATAAGGGTAGCAGCATTTATGTTTGGAATGGATATCTGGTGTATAAGTAA

mRNA sequence

ATGGGACAGAGGGTGGCAGTAACGGCGAAGGAGGTGCTCATTTCGGCGGTGCTGCCCATGGTGGAGGATTGCATCATGGACATGCCGGCCTACACCATGGACATGGTGGGGTACACCTCGCAGGGGCCCATTTTGGAGGTGGAGGAGACGGCGGCGGCGGCGGTGGTGGTGGTGGCTGTTGACGTTAATTCTTTCCTTCAGAGGTGGCACCGGCGTTCAACTAGAACTAGGAGGTGGGGGTTGTGGCGGTGGGGGTGGTGGNNNNNNNNNNNNNNNNNNNTGGGGGCTGTGGCGGCGGTGGGGGTGGTGGTGATGGGGGTTGTGGCGACGGTGGTGGGGGCTGTGGCGGCGGAGGCGGCTGTGGCGATTGATGATAAGGGTAGCAGCATTTATGTTTGGAATGGATATCTGGTGTATAAGTAA

Coding sequence (CDS)

ATGGGACAGAGGGTGGCAGTAACGGCGAAGGAGGTGCTCATTTCGGCGGTGCTGCCCATGGTGGAGGATTGCATCATGGACATGCCGGCCTACACCATGGACATGGTGGGGTACACCTCGCAGGGGCCCATTTTGGAGGTGGAGGAGACGGCGGCGGCGGCGGTGGTGGTGGTGGCTGTTGACGTTAATTCTTTCCTTCAGAGGTGGCACCGGCGTTCAACTAGAACTAGGAGGTGGGGGTTGTGGCGGTGGGGGTGGTGGNNNNNNNNNNNNNNNNNNNTGGGGGCTGTGGCGGCGGTGGGGGTGGTGGTGATGGGGGTTGTGGCGACGGTGGTGGGGGCTGTGGCGGCGGAGGCGGCTGTGGCGATTGATGATAAGGGTAGCAGCATTTATGTTTGGAATGGATATCTGGTGTATAAGTAA

Protein sequence

MGQRVAVTAKEVLISAVLPMVEDCIMDMPAYTMDMVGYTSQGPILEVEETAAAAVVVVAVDVNSFLQRWHRRSTRTRRWGLWRWGWWXXXXXXXGAVAAVGVVVMGVVATVVGAVAAEAAVAIDDKGSSIYVWNGYLVYK
Homology
[Close]
BLAST of CmaCh03G004030 vs. NCBI nr
Match: KAG6603630.1 (hypothetical protein SDJN03_04239, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 107.1 bits (266), Expect = 1.3e-19
Identity = 58/68 (85.29%), Postives = 61/68 (89.71%), Query Frame = 0 

Query: 1  MGQRVAVTAKEVLISAVLPMVEDCIMDMPAYTMDMVGYTSQGPILEVEETAAAAVVVVAV 60
          MGQRVAVTAKEVL+SAVLPMV+DCIMDMP YTMDMVGYTSQG ILEVE TAAAA   VAV
Sbjct: 1  MGQRVAVTAKEVLVSAVLPMVDDCIMDMPTYTMDMVGYTSQGFILEVEATAAAA---VAV 60

Query: 61 DVNSFLQR 69
          DV+SF QR
Sbjct: 61 DVSSFFQR 65

The following BLAST results are available for this feature:
BLAST of CmaCh03G004030 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh03G004030 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh03G004030 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6603630.11.3e-1985.29hypothetical protein SDJN03_04239, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CmaCh03G004030 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G004030.1CmaCh03G004030.1mRNA