CmaCh03G003930 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh03G003930
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
DescriptionEncodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).
LocationCma_Chr03: 4390293 .. 4392158 (-)
RNA-Seq ExpressionCmaCh03G003930
SyntenyCmaCh03G003930
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAGCGAGAGATCGAGGCAAATGAGAAATTCGCAGAGATTTTGACAGAATCTGTGTTTTTCCATTTTTACGGTCTTCCTTTCCTTATAAATTTGTGGGGGAAATGGCGGTTTCTTCATCGTTTCAATTCTGCGTTCCAGCATTCCCCTGTTCTTCCCCTTCCCTTCTCTGCTCCTCTGTTTTTCCCCCATTTCCATTGCAATCTTCTTCTCTCCATTAAAGGGTATCATCCGGAGACGGGTTTGATTGAAGGGCTACTTCGTTTTTCACTGATTAGGATCAAAATGGAAGGAAAGAAGCATGTGGGTGCCGAGTCCGAGTCCCAGTCCGAGTCCTCTTTTTCTCGCACTACTGACCCGTTTGGTTCCAGACACAGCTCCTATTCTTCCACCACTGGGATTTTTGGCTCTATATTTGCTCCTTCTTCCAAGGTATGTACCACTGTCCCATTCATTCTCATAAGGGTTTTGTTTCTACTCTTCGTTTTTCTCCATGGATTGCGATTCTGCTTGTTCTTATTCAGGTGTTAGGGAGAGACTCTCTGCTCTCTCAGGCCAAAGAGGGAGAGAGGGATTCTGTGAATGGGTCATGGATCCCCAACGCTGAAGCTCAAGGTTTGTGTTTCGTTTTAGTGTCCTTAATTTCTTAATTTTGAAATGATTTCAAGTGTTCTGAAAAGGGTTGAGAGTGAAATCTTCTTAAGAGCAAGTTTTGGATACAATTCATAACCAAGGCTTCATACTTGCAATATCCAATGATTCTGAGCCAGTTTCTGATTGCTTACACATGAACTTTGTTCTGAAAATTGCTTGATAATATTCTGTTCAAAAGATAGTCATTGAGATGTATATGCAGATGATAGTGGTAGTCATAGACAAAAAGAGAGACAGGAGAAGAAGAAGGATAAAGACATGAGTTCCATTTATCAGGAACAAGGAGCTCAACCATGTCATCTTAGCTCATCAATCTATTATGGTGGCCAAGACGTTTATGCTCATCCTCAGAATTCCCACAATTCCGAGGTGAACTCTGTGGTGAATGTATTAAACACATCACTTTGTAGCTTTATATCTTTCATCACATGAACATAATTCATTGCCTACTTTCAGATTTAACCAATTTCATATCGTTTCTCATTCGTTTTTTCGTTCATATCTTAACATGTGGTGAATATGATCTGGTTTTACTTGTTCTGGTGATATGTTTCAGTTCAAGGAGGGGGGAGAAGATGATTCTGGGAGTGCTTCAAGAGGAAATTGGTGGCAAGGTATGACATAGAGAAAAATATTGACACTTATCTTTCATTCAAATACTCATTTTATAACCATTCCTTGTTGTTTCAGGGTCTCTCTATTACTAGACCACCAAACTCCACAAGCTCTCCTTAGACTTTCAAAGTTAGTTTGAGTATCTTATATCAGTTTCTTATCGACCTTCCGTTCAAATTTGATTCGATCGATATCTTCGCGACTTTGGCTAAGATGGTGTGATTGGTTTGTATATTTATCTGTGACAGGTTAATATGCAGGTACATAGGATCATAGAGCTGAAGAACTACTTCTACTTCAACTCTTATTGTATGAAGGTAGACGCGAGCAAGATCGTTGTGAGAAAAAGCTGGTTGCCGTTTTCCAGCCGAAACAACAGAATCTCTTTTAAGTGAATTATTAATAGTTATAAGCATCTTTCTCAATTTTACTGTAAAGAATGCTGCTACTGCTGGCTGCTTCTGTTTGTTGTTGTTTAAACCTCCATAAAGGAGATCTGGGTTGCTGTTTGTTTATTAGTATCACATTGGAAACTGAATCGAAAGCTTGAATATACATATATCTTTCACAGAATGAACCTGGGAAAAATCTCTGGCCAAA

mRNA sequence

GAGCGAGAGATCGAGGCAAATGAGAAATTCGCAGAGATTTTGACAGAATCTGTGTTTTTCCATTTTTACGGTCTTCCTTTCCTTATAAATTTGTGGGGGAAATGGCGGTTTCTTCATCGTTTCAATTCTGCGTTCCAGCATTCCCCTGTTCTTCCCCTTCCCTTCTCTGCTCCTCTGTTTTTCCCCCATTTCCATTGCAATCTTCTTCTCTCCATTAAAGGGTATCATCCGGAGACGGGTTTGATTGAAGGGCTACTTCGTTTTTCACTGATTAGGATCAAAATGGAAGGAAAGAAGCATGTGGGTGCCGAGTCCGAGTCCCAGTCCGAGTCCTCTTTTTCTCGCACTACTGACCCGTTTGGTTCCAGACACAGCTCCTATTCTTCCACCACTGGGATTTTTGGCTCTATATTTGCTCCTTCTTCCAAGGTGTTAGGGAGAGACTCTCTGCTCTCTCAGGCCAAAGAGGGAGAGAGGGATTCTGTGAATGGGTCATGGATCCCCAACGCTGAAGCTCAAGATGATAGTGGTAGTCATAGACAAAAAGAGAGACAGGAGAAGAAGAAGGATAAAGACATGAGTTCCATTTATCAGGAACAAGGAGCTCAACCATGTCATCTTAGCTCATCAATCTATTATGGTGGCCAAGACGTTTATGCTCATCCTCAGAATTCCCACAATTCCGAGGTGAACTCTGTGTTCAAGGAGGGGGGAGAAGATGATTCTGGGAGTGCTTCAAGAGGAAATTGGTGGCAAGGGTCTCTCTATTACTAGACCACCAAACTCCACAAGCTCTCCTTAGACTTTCAAAGTTAATATGCAGGTACATAGGATCATAGAGCTGAAGAACTACTTCTACTTCAACTCTTATTGTATGAAGGTAGACGCGAGCAAGATCGTTGTGAGAAAAAGCTGGTTGCCGTTTTCCAGCCGAAACAACAGAATCTCTTTTAAGTGAATTATTAATAGTTATAAGCATCTTTCTCAATTTTACTGTAAAGAATGCTGCTACTGCTGGCTGCTTCTGTTTGTTGTTGTTTAAACCTCCATAAAGGAGATCTGGGTTGCTGTTTGTTTATTAGTATCACATTGGAAACTGAATCGAAAGCTTGAATATACATATATCTTTCACAGAATGAACCTGGGAAAAATCTCTGGCCAAA

Coding sequence (CDS)

ATGGAAGGAAAGAAGCATGTGGGTGCCGAGTCCGAGTCCCAGTCCGAGTCCTCTTTTTCTCGCACTACTGACCCGTTTGGTTCCAGACACAGCTCCTATTCTTCCACCACTGGGATTTTTGGCTCTATATTTGCTCCTTCTTCCAAGGTGTTAGGGAGAGACTCTCTGCTCTCTCAGGCCAAAGAGGGAGAGAGGGATTCTGTGAATGGGTCATGGATCCCCAACGCTGAAGCTCAAGATGATAGTGGTAGTCATAGACAAAAAGAGAGACAGGAGAAGAAGAAGGATAAAGACATGAGTTCCATTTATCAGGAACAAGGAGCTCAACCATGTCATCTTAGCTCATCAATCTATTATGGTGGCCAAGACGTTTATGCTCATCCTCAGAATTCCCACAATTCCGAGGTGAACTCTGTGTTCAAGGAGGGGGGAGAAGATGATTCTGGGAGTGCTTCAAGAGGAAATTGGTGGCAAGGGTCTCTCTATTACTAG

Protein sequence

MEGKKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQAKEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYGGQDVYAHPQNSHNSEVNSVFKEGGEDDSGSASRGNWWQGSLYY
Homology
[Close]
BLAST of CmaCh03G003930 vs. ExPASy TrEMBL
Match: A0A6J1ITQ7 (uncharacterized protein LOC111478333 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478333 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 3.5e-83
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0 

Query: 1   MEGKKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA 60
           MEGKKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA
Sbjct: 1   MEGKKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA 60

Query: 61  KEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYG 120
           KEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYG
Sbjct: 61  KEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYG 120

Query: 121 GQDVYAHPQNSHNSEVNSVFKEGGEDDSGSASRGNWWQGSLYY 164
           GQDVYAHPQNSHNSEVNSVFKEGGEDDSGSASRGNWWQGSLYY
Sbjct: 121 GQDVYAHPQNSHNSEVNSVFKEGGEDDSGSASRGNWWQGSLYY 163

[Close]
BLAST of CmaCh03G003930 vs. ExPASy TrEMBL
Match: A0A6J1IMB9 (uncharacterized protein LOC111478333 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478333 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.1e-79
Identity = 159/163 (97.55%), Postives = 159/163 (97.55%), Query Frame = 0 

Query: 1   MEGKKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA 60
           MEGKKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA
Sbjct: 1   MEGKKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA 60

Query: 61  KEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYG 120
           KEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYG
Sbjct: 61  KEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYG 120

Query: 121 GQDVYAHPQNSHNSEVNSVFKEGGEDDSGSASRGNWWQGSLYY 164
           GQDVYAHPQNSHNSE    FKEGGEDDSGSASRGNWWQGSLYY
Sbjct: 121 GQDVYAHPQNSHNSE----FKEGGEDDSGSASRGNWWQGSLYY 159

[Close]
BLAST of CmaCh03G003930 vs. ExPASy TrEMBL
Match: A0A6J1GE87 (uncharacterized protein LOC111453382 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453382 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 5.4e-76
Identity = 155/163 (95.09%), Postives = 157/163 (96.32%), Query Frame = 0 

Query: 1   MEGKKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA 60
           MEGKKHVGAESE  SESS SRTTDPFGS+HSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA
Sbjct: 1   MEGKKHVGAESE--SESSSSRTTDPFGSKHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA 60

Query: 61  KEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYG 120
           KEGERDSVNG WIPNAEAQDD+GSHRQKERQE KKDKDMSSIYQEQGAQPCHLSSSIYYG
Sbjct: 61  KEGERDSVNGPWIPNAEAQDDNGSHRQKERQE-KKDKDMSSIYQEQGAQPCHLSSSIYYG 120

Query: 121 GQDVYAHPQNSHNSEVNSVFKEGGEDDSGSASRGNWWQGSLYY 164
           GQDVYAHPQNSHN EVNSVFKEGGEDDSGSASRGNWWQGSLYY
Sbjct: 121 GQDVYAHPQNSHNFEVNSVFKEGGEDDSGSASRGNWWQGSLYY 160

[Close]
BLAST of CmaCh03G003930 vs. ExPASy TrEMBL
Match: A0A6J1GF76 (uncharacterized protein LOC111453382 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453382 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.7e-72
Identity = 151/163 (92.64%), Postives = 153/163 (93.87%), Query Frame = 0 

Query: 1   MEGKKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA 60
           MEGKKHVGAESE  SESS SRTTDPFGS+HSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA
Sbjct: 1   MEGKKHVGAESE--SESSSSRTTDPFGSKHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA 60

Query: 61  KEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYG 120
           KEGERDSVNG WIPNAEAQDD+GSHRQKERQE KKDKDMSSIYQEQGAQPCHLSSSIYYG
Sbjct: 61  KEGERDSVNGPWIPNAEAQDDNGSHRQKERQE-KKDKDMSSIYQEQGAQPCHLSSSIYYG 120

Query: 121 GQDVYAHPQNSHNSEVNSVFKEGGEDDSGSASRGNWWQGSLYY 164
           GQDVYAHPQNSHN E    FKEGGEDDSGSASRGNWWQGSLYY
Sbjct: 121 GQDVYAHPQNSHNFE----FKEGGEDDSGSASRGNWWQGSLYY 156

[Close]
BLAST of CmaCh03G003930 vs. ExPASy TrEMBL
Match: A0A5D3DIY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001300 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 1.3e-56
Identity = 127/164 (77.44%), Postives = 136/164 (82.93%), Query Frame = 0 

Query: 1   MEGKKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA 60
           MEGKKHVG  S     SS S TTD FGS  +SYSSTTGIFGSIFAPSSKVLGR+SLLSQ 
Sbjct: 1   MEGKKHVGLGS-----SSSSLTTDLFGSNETSYSSTTGIFGSIFAPSSKVLGRESLLSQT 60

Query: 61  KEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYG 120
           KE ER+SVN  W PNAEAQDD+ +H QKE QE  K+KDMSSIYQ+Q AQPCHLSSSIYYG
Sbjct: 61  KERERNSVNEPWNPNAEAQDDNANHTQKESQE-MKNKDMSSIYQDQSAQPCHLSSSIYYG 120

Query: 121 GQDVYAHPQNSHNSEVNSVF-KEGGEDDSGSASRGNWWQGSLYY 164
           GQDVY HPQNS+NS  NS + KEGGEDDSGSASRGNWWQGSLYY
Sbjct: 121 GQDVYTHPQNSYNSGANSAYKKEGGEDDSGSASRGNWWQGSLYY 158

[Close]
BLAST of CmaCh03G003930 vs. NCBI nr
Match: XP_022978304.1 (uncharacterized protein LOC111478333 isoform X1 [Cucurbita maxima] >XP_022978305.1 uncharacterized protein LOC111478333 isoform X1 [Cucurbita maxima])

HSP 1 Score: 317.4 bits (812), Expect = 7.2e-83
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0 

Query: 1   MEGKKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA 60
           MEGKKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA
Sbjct: 1   MEGKKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA 60

Query: 61  KEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYG 120
           KEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYG
Sbjct: 61  KEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYG 120

Query: 121 GQDVYAHPQNSHNSEVNSVFKEGGEDDSGSASRGNWWQGSLYY 164
           GQDVYAHPQNSHNSEVNSVFKEGGEDDSGSASRGNWWQGSLYY
Sbjct: 121 GQDVYAHPQNSHNSEVNSVFKEGGEDDSGSASRGNWWQGSLYY 163

[Close]
BLAST of CmaCh03G003930 vs. NCBI nr
Match: XP_022978306.1 (uncharacterized protein LOC111478333 isoform X2 [Cucurbita maxima])

HSP 1 Score: 304.3 bits (778), Expect = 6.3e-79
Identity = 159/163 (97.55%), Postives = 159/163 (97.55%), Query Frame = 0 

Query: 1   MEGKKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA 60
           MEGKKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA
Sbjct: 1   MEGKKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA 60

Query: 61  KEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYG 120
           KEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYG
Sbjct: 61  KEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYG 120

Query: 121 GQDVYAHPQNSHNSEVNSVFKEGGEDDSGSASRGNWWQGSLYY 164
           GQDVYAHPQNSHNSE    FKEGGEDDSGSASRGNWWQGSLYY
Sbjct: 121 GQDVYAHPQNSHNSE----FKEGGEDDSGSASRGNWWQGSLYY 159

[Close]
BLAST of CmaCh03G003930 vs. NCBI nr
Match: XP_022950232.1 (uncharacterized protein LOC111453382 isoform X1 [Cucurbita moschata] >XP_022950233.1 uncharacterized protein LOC111453382 isoform X1 [Cucurbita moschata])

HSP 1 Score: 293.5 bits (750), Expect = 1.1e-75
Identity = 155/163 (95.09%), Postives = 157/163 (96.32%), Query Frame = 0 

Query: 1   MEGKKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA 60
           MEGKKHVGAESE  SESS SRTTDPFGS+HSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA
Sbjct: 1   MEGKKHVGAESE--SESSSSRTTDPFGSKHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA 60

Query: 61  KEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYG 120
           KEGERDSVNG WIPNAEAQDD+GSHRQKERQE KKDKDMSSIYQEQGAQPCHLSSSIYYG
Sbjct: 61  KEGERDSVNGPWIPNAEAQDDNGSHRQKERQE-KKDKDMSSIYQEQGAQPCHLSSSIYYG 120

Query: 121 GQDVYAHPQNSHNSEVNSVFKEGGEDDSGSASRGNWWQGSLYY 164
           GQDVYAHPQNSHN EVNSVFKEGGEDDSGSASRGNWWQGSLYY
Sbjct: 121 GQDVYAHPQNSHNFEVNSVFKEGGEDDSGSASRGNWWQGSLYY 160

[Close]
BLAST of CmaCh03G003930 vs. NCBI nr
Match: XP_022950234.1 (uncharacterized protein LOC111453382 isoform X2 [Cucurbita moschata] >KAG7033807.1 hypothetical protein SDJN02_03532 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 280.4 bits (716), Expect = 9.8e-72
Identity = 151/163 (92.64%), Postives = 153/163 (93.87%), Query Frame = 0 

Query: 1   MEGKKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA 60
           MEGKKHVGAESE  SESS SRTTDPFGS+HSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA
Sbjct: 1   MEGKKHVGAESE--SESSSSRTTDPFGSKHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA 60

Query: 61  KEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYG 120
           KEGERDSVNG WIPNAEAQDD+GSHRQKERQE KKDKDMSSIYQEQGAQPCHLSSSIYYG
Sbjct: 61  KEGERDSVNGPWIPNAEAQDDNGSHRQKERQE-KKDKDMSSIYQEQGAQPCHLSSSIYYG 120

Query: 121 GQDVYAHPQNSHNSEVNSVFKEGGEDDSGSASRGNWWQGSLYY 164
           GQDVYAHPQNSHN E    FKEGGEDDSGSASRGNWWQGSLYY
Sbjct: 121 GQDVYAHPQNSHNFE----FKEGGEDDSGSASRGNWWQGSLYY 156

[Close]
BLAST of CmaCh03G003930 vs. NCBI nr
Match: KAG6603620.1 (hypothetical protein SDJN03_04229, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 280.0 bits (715), Expect = 1.3e-71
Identity = 151/163 (92.64%), Postives = 152/163 (93.25%), Query Frame = 0 

Query: 1   MEGKKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA 60
           MEGKKHVG ESE  SESS SRTTDPFGS+HSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA
Sbjct: 1   MEGKKHVGTESE--SESSSSRTTDPFGSKHSSYSSTTGIFGSIFAPSSKVLGRDSLLSQA 60

Query: 61  KEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYG 120
           KEGERDSVNG WIPNAEAQDDSGSHRQKERQE KKDKDMSSIYQEQGAQPCHLSSSIYYG
Sbjct: 61  KEGERDSVNGPWIPNAEAQDDSGSHRQKERQE-KKDKDMSSIYQEQGAQPCHLSSSIYYG 120

Query: 121 GQDVYAHPQNSHNSEVNSVFKEGGEDDSGSASRGNWWQGSLYY 164
           GQDVYAHPQNSHN E    FKEGGEDDSGSASRGNWWQGSLYY
Sbjct: 121 GQDVYAHPQNSHNFE----FKEGGEDDSGSASRGNWWQGSLYY 156

[Close]
BLAST of CmaCh03G003930 vs. TAIR 10
Match: AT5G02020.1 (Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). )

HSP 1 Score: 120.9 bits (302), Expect = 9.3e-28
Identity = 81/164 (49.39%), Postives = 102/164 (62.20%), Query Frame = 0 

Query: 1   MEGKKHVGAESESQSESSFSRTTDPFGSRHS-SYSSTTGIFGSIFAPSSKVLGRDSLLSQ 60
           MEG+K   + S   S SS   T++ FGSR + S  S++GI GSIF P SKVLGR+S+  +
Sbjct: 1   MEGRKKKASSSSPCSSSSL--TSELFGSRENPSSPSSSGILGSIFPPPSKVLGRESVRQE 60

Query: 61  AKEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYY 120
              G      G W  N +     G+    +R  ++++   S   Q+Q  QPCHLSSSIYY
Sbjct: 61  TVTG------GCW--NEKTSKTGGN---VDRNREQQENHGSGYQQDQRVQPCHLSSSIYY 120

Query: 121 GGQDVYAHPQNSHNSEVNSVFKEGGEDDSGSASRGNWWQGSLYY 164
           GG DVY  PQNS ++  N   K+GGEDDSGSASRGNWWQGSLYY
Sbjct: 121 GGPDVYFQPQNSTSNSTNK--KDGGEDDSGSASRGNWWQGSLYY 149

[Close]
BLAST of CmaCh03G003930 vs. TAIR 10
Match: AT3G55646.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 83.2 bits (204), Expect = 2.1e-16
Identity = 71/162 (43.83%), Postives = 87/162 (53.70%), Query Frame = 0 

Query: 4   KKHVGAESESQSESSFSRTTDPFGSRHSSYSSTTGIFGSIF-APSSKVLGRDSLLSQAKE 63
           KK V A S S S SSF     P  S  SS SS TG+F SIF  PS+  LGR   +  A +
Sbjct: 8   KKIVSASSSSSSLSSFDHIFGPRVSSSSS-SSATGLFKSIFPPPSADQLGRQ--VDFASQ 67

Query: 64  GERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYYGGQ 123
           G          PNA+           ER  KK+ K   S Y E+   PCHLSSS+YYGGQ
Sbjct: 68  GGHVKYQS---PNAKG----------ERSNKKEKK---SYYNEETEPPCHLSSSLYYGGQ 127

Query: 124 DVYAHPQNSHNSEVNSVFKEGGED-DSGSASRGNWWQGSLYY 164
           + Y    +S  +  +  +K+ GE+ DS  ASRGNWW+GSLYY
Sbjct: 128 ETY----SSTTTTTHDTYKKDGEEGDSKRASRGNWWEGSLYY 146

[Close]
BLAST of CmaCh03G003930 vs. TAIR 10
Match: AT2G39855.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55646.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-15
Identity = 68/165 (41.21%), Postives = 83/165 (50.30%), Query Frame = 0 

Query: 1   MEGKKHVGAESESQSESSFSRTTDPFGSR--HSSYSSTTGIFGSIFAPSSKVLGRDSLLS 60
           M+ KK V   S S S S        FG R  HS  SSTTG+F SIF P S V        
Sbjct: 1   MDKKKSVSGSSSSSSSS----LDHIFGPRVSHSYSSSTTGLFKSIFPPPSAV-------- 60

Query: 61  QAKEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIY 120
              +G   S NG     A     +      ER E+ K+K+  S   E+   PC+LSSSIY
Sbjct: 61  --TQGNLTSRNG-----AAKYQPTNFETPNERGERSKNKERKSYQSEETQPPCNLSSSIY 120

Query: 121 YGGQDVYAHPQNSHNSEVNSVFKEGGEDDSGSASRGNWWQGSLYY 164
           YGGQD Y    +S  +  ++  K+G E DS SASRGNWW+GS  Y
Sbjct: 121 YGGQDNY----SSSTTNPDAYKKDGEEGDSESASRGNWWEGSFNY 142

[Close]
BLAST of CmaCh03G003930 vs. TAIR 10
Match: AT5G02020.2 (Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). )

HSP 1 Score: 77.0 bits (188), Expect = 1.5e-14
Identity = 58/132 (43.94%), Postives = 76/132 (57.58%), Query Frame = 0 

Query: 1   MEGKKHVGAESESQSESSFSRTTDPFGSRHS-SYSSTTGIFGSIFAPSSKVLGRDSLLSQ 60
           MEG+K   + S   S SS   T++ FGSR + S  S++GI GSIF P SKVLGR+S+  +
Sbjct: 1   MEGRKKKASSSSPCSSSSL--TSELFGSRENPSSPSSSGILGSIFPPPSKVLGRESVRQE 60

Query: 61  AKEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYY 120
              G      G W  N +     G+    +R  ++++   S   Q+Q  QPCHLSSSIYY
Sbjct: 61  TVTG------GCW--NEKTSKTGGN---VDRNREQQENHGSGYQQDQRVQPCHLSSSIYY 119

Query: 121 GGQDVYAHPQNS 132
           GG DVY  PQNS
Sbjct: 121 GGPDVYFQPQNS 119

[Close]
BLAST of CmaCh03G003930 vs. TAIR 10
Match: AT5G59080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 75.9 bits (185), Expect = 3.4e-14
Identity = 68/170 (40.00%), Postives = 83/170 (48.82%), Query Frame = 0 

Query: 1   MEGKKHVGAESESQSESSFSRTTDPFGSRH-SSYSSTTGIFGSIFAPSSKVLGRDSLLSQ 60
           MEGK  VG    S S +S S T + FGS+  S  SS++GIF ++F   SK   RD   S 
Sbjct: 1   MEGKGRVG----SSSSTSSSFTAELFGSKDPSPPSSSSGIFSTMFPHPSKGSARDG--SN 60

Query: 61  AKEGERDSVNGSWIPNAEAQDDSGSHRQKERQEKKKDKDMSSIYQEQGAQPCHLSSSIYY 120
           +K G                       Q +R+E       S   QE   +PCHLSSS+YY
Sbjct: 61  SKHGS----------------------QAQRRE-------SLNAQEDRVEPCHLSSSLYY 120

Query: 121 GGQDVYAH-PQNSHNSEVNSVFKEGGEDDSG-----SASRGNWWQGSLYY 164
           GGQDVYA    N     V +  +  GEDD+        SRGNWWQGSLYY
Sbjct: 121 GGQDVYARSTTNQTYPPVKNDRRRSGEDDANGQNPQDVSRGNWWQGSLYY 135

The following BLAST results are available for this feature:
BLAST of CmaCh03G003930 vs.
Match NameE-valueIdentityDescription
BLAST of CmaCh03G003930 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1ITQ73.5e-83100.00uncharacterized protein LOC111478333 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1IMB93.1e-7997.55uncharacterized protein LOC111478333 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1GE875.4e-7695.09uncharacterized protein LOC111453382 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1GF764.7e-7292.64uncharacterized protein LOC111453382 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A5D3DIY41.3e-5677.44Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of CmaCh03G003930 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022978304.17.2e-83100.00uncharacterized protein LOC111478333 isoform X1 [Cucurbita maxima] >XP_022978305... [more]
XP_022978306.16.3e-7997.55uncharacterized protein LOC111478333 isoform X2 [Cucurbita maxima][more]
XP_022950232.11.1e-7595.09uncharacterized protein LOC111453382 isoform X1 [Cucurbita moschata] >XP_0229502... [more]
XP_022950234.19.8e-7292.64uncharacterized protein LOC111453382 isoform X2 [Cucurbita moschata] >KAG7033807... [more]
KAG6603620.11.3e-7192.64hypothetical protein SDJN03_04229, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CmaCh03G003930 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G02020.19.3e-2849.39Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine ric... [more]
AT3G55646.12.1e-1643.83unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT2G39855.21.4e-1541.21unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G02020.21.5e-1443.94Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine ric... [more]
AT5G59080.13.4e-1440.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response... [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 123..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 12..38
NoneNo IPR availablePANTHERPTHR33738:SF1PLANT/T7H20-70 PROTEINcoord: 1..163
NoneNo IPR availablePANTHERPTHR33738EMB|CAB82975.1coord: 1..163

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G003930.1CmaCh03G003930.1mRNA