CmaCh03G003890 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G003890
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	17.6 kDa class I heat shock protein-like
Location	Cma_Chr03: 4380460 .. 4380891 (+)
RNA-Seq Expression	CmaCh03G003890
Synteny	CmaCh03G003890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTGATTCCAAGTGTATTCGGCACCGGGAGCCTCTTCGACCCCTTCTTGTCAGACATATGGGCACCCACCACCGCCAGCGAAGCCTCCTCAATCGCCAACACGCAGGTCGATTGGAAAGAGACCCCAGAGGCCCACATTTTCAAGGCCGATCTGCCGGGGCTGAAGAAGGAGGAAGTCAAAGTGGAGGTGGAGGACGGCGGCGTGCTTCAGATCAGCGGCGAGAGGGGCGTTGAAAAGGAGGAGAAGAACGAGAAGTGGCATCGCGTTGAAAGGGGCAAAGGGAAGTTCCTGAGGAGATTCAGATTGCCGCAGAATGCTAAAGTGGAGGAGGTCAAGGCGGCGATGGAGAATGGGGTTCTGACTGTCACCGTTCCGAAGGTGCCGGAGAAGAAGCCGGCGGTAAAATCGGTTGCTATCTCCGGGTGA

mRNA sequence

ATGTCTTTGATTCCAAGTGTATTCGGCACCGGGAGCCTCTTCGACCCCTTCTTGTCAGACATATGGGCACCCACCACCGCCAGCGAAGCCTCCTCAATCGCCAACACGCAGGTCGATTGGAAAGAGACCCCAGAGGCCCACATTTTCAAGGCCGATCTGCCGGGGCTGAAGAAGGAGGAAGTCAAAGTGGAGGTGGAGGACGGCGGCGTGCTTCAGATCAGCGGCGAGAGGGGCGTTGAAAAGGAGGAGAAGAACGAGAAGTGGCATCGCGTTGAAAGGGGCAAAGGGAAGTTCCTGAGGAGATTCAGATTGCCGCAGAATGCTAAAGTGGAGGAGGTCAAGGCGGCGATGGAGAATGGGGTTCTGACTGTCACCGTTCCGAAGGTGCCGGAGAAGAAGCCGGCGGTAAAATCGGTTGCTATCTCCGGGTGA

Coding sequence (CDS)

ATGTCTTTGATTCCAAGTGTATTCGGCACCGGGAGCCTCTTCGACCCCTTCTTGTCAGACATATGGGCACCCACCACCGCCAGCGAAGCCTCCTCAATCGCCAACACGCAGGTCGATTGGAAAGAGACCCCAGAGGCCCACATTTTCAAGGCCGATCTGCCGGGGCTGAAGAAGGAGGAAGTCAAAGTGGAGGTGGAGGACGGCGGCGTGCTTCAGATCAGCGGCGAGAGGGGCGTTGAAAAGGAGGAGAAGAACGAGAAGTGGCATCGCGTTGAAAGGGGCAAAGGGAAGTTCCTGAGGAGATTCAGATTGCCGCAGAATGCTAAAGTGGAGGAGGTCAAGGCGGCGATGGAGAATGGGGTTCTGACTGTCACCGTTCCGAAGGTGCCGGAGAAGAAGCCGGCGGTAAAATCGGTTGCTATCTCCGGGTGA

Protein sequence

MSLIPSVFGTGSLFDPFLSDIWAPTTASEASSIANTQVDWKETPEAHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENGVLTVTVPKVPEKKPAVKSVAISG

Homology

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BLAST of CmaCh03G003890 vs. ExPASy Swiss-Prot
Match: P19037 (18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 PE=1 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 3.9e-51
Identity = 106/159 (66.67%), Postives = 121/159 (76.10%), Query Frame = 0


Query: 1   MSLIPSVFG--TGSLFDPFLSDIWAP--------------TTASEASSIANTQVDWKETP 60
           MSLIPS+FG    ++FDPF  D+W P              +TA + ++  N +VDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRL 120
           EAH+FKADLPGLKKEEVKVEVED  VLQISGER  E EEKN+KWHRVER  GKF+RRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PQNAKVEEVKAAMENGVLTVTVPKVPEKKPAVKSVAISG 144
           P+NAK+EEVKA MENGVLTV VPK PEKKP VKS+ ISG
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of CmaCh03G003890 vs. ExPASy Swiss-Prot
Match: P13853 (17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6C PE=2 SV=2)

HSP 1 Score: 196.1 bits (497), Expect = 2.8e-49
Identity = 102/157 (64.97%), Postives = 122/157 (77.71%), Query Frame = 0


Query: 1   MSLIPSVFG--TGSLFDPFLSDIWAP------------TTASEASSIANTQVDWKETPEA 60
           MSLIPS+FG    ++FDPF  D++ P              A + ++  N +VDW+ETPEA
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEA 60

Query: 61  HIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQ 120
           H+FKADLPGL+KEEVKVEVEDG +LQISGER  E EEKN+KWHRVER  GKF RRFRLP+
Sbjct: 61  HVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPE 120

Query: 121 NAKVEEVKAAMENGVLTVTVPKVPEKKPAVKSVAISG 144
           NAK+EE+KA+MENGVL+VTVPKVPEKKP VKS+ ISG
Sbjct: 121 NAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of CmaCh03G003890 vs. ExPASy Swiss-Prot
Match: P30221 (17.8 kDa class I heat shock protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 4.8e-49
Identity = 101/154 (65.58%), Postives = 123/154 (79.87%), Query Frame = 0


Query: 1   MSLIPSVFG---TGSLFDPFLSDIWAP--------TTASEASSIANTQVDWKETPEAHIF 60
           MSLIP +FG   + S+FDPF  D++ P        T + E+S+ ANT++DWKETPE H+F
Sbjct: 1   MSLIPRIFGDRRSSSMFDPFSIDVFDPFRELGFPSTNSGESSAFANTRIDWKETPEPHVF 60

Query: 61  KADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAK 120
           K DLPGLKKEEVKVEVE+  VLQISGER VEKE+KN+KWHR+ER  GKF+RRFRLP+NAK
Sbjct: 61  KVDLPGLKKEEVKVEVEEDRVLQISGERNVEKEDKNDKWHRMERSSGKFMRRFRLPENAK 120

Query: 121 VEEVKAAMENGVLTVTVPKVPEKKPAVKSVAISG 144
           +++VKA+MENGVLTVTVPK   KKP VKS+ ISG
Sbjct: 121 MDQVKASMENGVLTVTVPKEEVKKPEVKSIEISG 154

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BLAST of CmaCh03G003890 vs. ExPASy Swiss-Prot
Match: P27396 (17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 1.1e-48
Identity = 104/157 (66.24%), Postives = 123/157 (78.34%), Query Frame = 0


Query: 1   MSLIPSVFG--TGSLFDPFLSDIWAP--------TTAS----EASSIANTQVDWKETPEA 60
           MS+IPS FG    ++FDPF  D+W P        ++AS    E ++  NT +DWKETP+A
Sbjct: 1   MSIIPSFFGGRRSNVFDPFSLDVWDPFKDFPLVTSSASEFGKETAAFVNTHIDWKETPQA 60

Query: 61  HIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQ 120
           H+FKADLPGLKKEEVKVE+E+G VLQISGER  EKEEKN+KWHRVER  GKFLRRFRLP+
Sbjct: 61  HVFKADLPGLKKEEVKVELEEGKVLQISGERNKEKEEKNDKWHRVERSSGKFLRRFRLPE 120

Query: 121 NAKVEEVKAAMENGVLTVTVPKVPEKKPAVKSVAISG 144
           NAKV+EVKAAM NGV+TVTVPKV  KKP VK++ ISG
Sbjct: 121 NAKVDEVKAAMANGVVTVTVPKVEIKKPEVKAIDISG 157

[Close]

BLAST of CmaCh03G003890 vs. ExPASy Swiss-Prot
Match: P04793 (17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 2.4e-48
Identity = 99/153 (64.71%), Postives = 122/153 (79.74%), Query Frame = 0


Query: 1   MSLIPSVFG--TGSLFDPFLSDIWAP--------TTASEASSIANTQVDWKETPEAHIFK 60
           MSLIPS+FG    ++FDPF  D+W P        + ++E S+  NT+VDWKETPEAH+F+
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSLDVWDPFKDFHFPTSLSAENSAFVNTRVDWKETPEAHVFE 60

Query: 61  ADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKV 120
           AD+PGLKKEEVKV++ED  VLQISGER +EKE+KN+ WHRVER  G F+RRFRLP+NAKV
Sbjct: 61  ADIPGLKKEEVKVQIEDDRVLQISGERNLEKEDKNDTWHRVERSSGNFMRRFRLPENAKV 120

Query: 121 EEVKAAMENGVLTVTVPKVPEKKPAVKSVAISG 144
           E+VKA+MENGVLTVTVPK   KKP VK++ ISG
Sbjct: 121 EQVKASMENGVLTVTVPKEEVKKPDVKAIEISG 153

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BLAST of CmaCh03G003890 vs. ExPASy TrEMBL
Match: A0A6J1ITR2 (18.1 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111478336 PE=3 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 6.0e-71
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MSLIPSVFGTGSLFDPFLSDIWAPTTASEASSIANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPSVFGTGSLFDPFLSDIWAPTTASEASSIANTQVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSVFGTGSLFDPFLSDIWAPTTASEASSIANTQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG 120
           VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG
Sbjct: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAVKSVAISG 144
           VLTVTVPKVPEKKPAVKSVAISG
Sbjct: 121 VLTVTVPKVPEKKPAVKSVAISG 143

[Close]

BLAST of CmaCh03G003890 vs. ExPASy TrEMBL
Match: A0A6J1GDY5 (18.1 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111453310 PE=3 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 5.6e-69
Identity = 140/143 (97.90%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MSLIPSVFGTGSLFDPFLSDIWAPTTASEASSIANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPSVFGT SLFDPFLSDIWAPTTASEASS ANTQVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSVFGTRSLFDPFLSDIWAPTTASEASSFANTQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG 120
           VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG
Sbjct: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAVKSVAISG 144
           VLTVTVPKVPEKKPAVKSV ISG
Sbjct: 121 VLTVTVPKVPEKKPAVKSVEISG 143

[Close]

BLAST of CmaCh03G003890 vs. ExPASy TrEMBL
Match: A0A5A7TT84 (18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001480 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.6e-63
Identity = 127/143 (88.81%), Postives = 134/143 (93.71%), Query Frame = 0


Query: 1   MSLIPSVFGTGSLFDPFLSDIWAPTTASEASSIANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPS+FG+ S+FDPFLSDIWAPT A E SS AN QVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSLFGSRSVFDPFLSDIWAPTGAGEVSSFANAQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG 120
           VKVEVEDGG+LQISGER VEKEEKNEKWHRVERGKGKF+RRFRLPQNAKV+EVKAAMENG
Sbjct: 61  VKVEVEDGGILQISGERAVEKEEKNEKWHRVERGKGKFMRRFRLPQNAKVDEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAVKSVAISG 144
           VLTVTVPKVPEKKPA KS+ ISG
Sbjct: 121 VLTVTVPKVPEKKPATKSIEISG 143

[Close]

BLAST of CmaCh03G003890 vs. ExPASy TrEMBL
Match: A0A1S3BK89 (18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103490772 PE=3 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 1.6e-63
Identity = 127/143 (88.81%), Postives = 134/143 (93.71%), Query Frame = 0


Query: 1   MSLIPSVFGTGSLFDPFLSDIWAPTTASEASSIANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPS+FG+ S+FDPFLSDIWAPT A E SS AN QVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSLFGSRSVFDPFLSDIWAPTGAGEVSSFANAQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG 120
           VKVEVEDGG+LQISGER VEKEEKNEKWHRVERGKGKF+RRFRLPQNAKV+EVKAAMENG
Sbjct: 61  VKVEVEDGGILQISGERAVEKEEKNEKWHRVERGKGKFMRRFRLPQNAKVDEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAVKSVAISG 144
           VLTVTVPKVPEKKPA KS+ ISG
Sbjct: 121 VLTVTVPKVPEKKPATKSIEISG 143

[Close]

BLAST of CmaCh03G003890 vs. ExPASy TrEMBL
Match: A0A0A0L154 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G303700 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.8e-62
Identity = 125/143 (87.41%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 1   MSLIPSVFGTGSLFDPFLSDIWAPTTASEASSIANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPS+FGT S+FDPFLSDIWA T A E SS ANTQVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSLFGTRSVFDPFLSDIWAQTGAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG 120
           VKVEVEDGG+LQISGER VEKEEKNEKWHRVERGKGKF R+FRLPQNAKV+EVKAAMENG
Sbjct: 61  VKVEVEDGGILQISGERAVEKEEKNEKWHRVERGKGKFTRKFRLPQNAKVDEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAVKSVAISG 144
           VLTVT+PKVPEKKPA KS+ I+G
Sbjct: 121 VLTVTIPKVPEKKPATKSIEIAG 143

[Close]

BLAST of CmaCh03G003890 vs. NCBI nr
Match: XP_022978309.1 (18.1 kDa class I heat shock protein-like [Cucurbita maxima])

HSP 1 Score: 276.6 bits (706), Expect = 1.2e-70
Identity = 143/143 (100.00%), Postives = 143/143 (100.00%), Query Frame = 0


Query: 1   MSLIPSVFGTGSLFDPFLSDIWAPTTASEASSIANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPSVFGTGSLFDPFLSDIWAPTTASEASSIANTQVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSVFGTGSLFDPFLSDIWAPTTASEASSIANTQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG 120
           VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG
Sbjct: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAVKSVAISG 144
           VLTVTVPKVPEKKPAVKSVAISG
Sbjct: 121 VLTVTVPKVPEKKPAVKSVAISG 143

[Close]

BLAST of CmaCh03G003890 vs. NCBI nr
Match: XP_022950131.1 (18.1 kDa class I heat shock protein-like [Cucurbita moschata] >XP_023543160.1 18.1 kDa class I heat shock protein-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68
Identity = 140/143 (97.90%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MSLIPSVFGTGSLFDPFLSDIWAPTTASEASSIANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPSVFGT SLFDPFLSDIWAPTTASEASS ANTQVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSVFGTRSLFDPFLSDIWAPTTASEASSFANTQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG 120
           VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG
Sbjct: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAVKSVAISG 144
           VLTVTVPKVPEKKPAVKSV ISG
Sbjct: 121 VLTVTVPKVPEKKPAVKSVEISG 143

[Close]

BLAST of CmaCh03G003890 vs. NCBI nr
Match: KAG6603616.1 (17.6 kDa class I heat shock protein 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 270.0 bits (689), Expect = 1.2e-68
Identity = 140/143 (97.90%), Postives = 140/143 (97.90%), Query Frame = 0


Query: 1   MSLIPSVFGTGSLFDPFLSDIWAPTTASEASSIANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPSVFGT SLFDPFLSDIWAPTTASEASS ANTQVDWKETPEAHIFKADLPGLKKEE
Sbjct: 128 MSLIPSVFGTRSLFDPFLSDIWAPTTASEASSFANTQVDWKETPEAHIFKADLPGLKKEE 187

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG 120
           VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG
Sbjct: 188 VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG 247

Query: 121 VLTVTVPKVPEKKPAVKSVAISG 144
           VLTVTVPKVPEKKPAVKSV ISG
Sbjct: 248 VLTVTVPKVPEKKPAVKSVEISG 270

[Close]

BLAST of CmaCh03G003890 vs. NCBI nr
Match: XP_008448675.1 (PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo] >KAA0045107.1 18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa] >TYK23631.1 18.1 kDa class I heat shock protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 251.9 bits (642), Expect = 3.3e-63
Identity = 127/143 (88.81%), Postives = 134/143 (93.71%), Query Frame = 0


Query: 1   MSLIPSVFGTGSLFDPFLSDIWAPTTASEASSIANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPS+FG+ S+FDPFLSDIWAPT A E SS AN QVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSLFGSRSVFDPFLSDIWAPTGAGEVSSFANAQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG 120
           VKVEVEDGG+LQISGER VEKEEKNEKWHRVERGKGKF+RRFRLPQNAKV+EVKAAMENG
Sbjct: 61  VKVEVEDGGILQISGERAVEKEEKNEKWHRVERGKGKFMRRFRLPQNAKVDEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAVKSVAISG 144
           VLTVTVPKVPEKKPA KS+ ISG
Sbjct: 121 VLTVTVPKVPEKKPATKSIEISG 143

[Close]

BLAST of CmaCh03G003890 vs. NCBI nr
Match: XP_004147911.1 (17.6 kDa class I heat shock protein 3 [Cucumis sativus] >KGN54322.1 hypothetical protein Csa_018077 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 3.6e-62
Identity = 125/143 (87.41%), Postives = 133/143 (93.01%), Query Frame = 0


Query: 1   MSLIPSVFGTGSLFDPFLSDIWAPTTASEASSIANTQVDWKETPEAHIFKADLPGLKKEE 60
           MSLIPS+FGT S+FDPFLSDIWA T A E SS ANTQVDWKETPEAHIFKADLPGLKKEE
Sbjct: 1   MSLIPSLFGTRSVFDPFLSDIWAQTGAGEVSSFANTQVDWKETPEAHIFKADLPGLKKEE 60

Query: 61  VKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKVEEVKAAMENG 120
           VKVEVEDGG+LQISGER VEKEEKNEKWHRVERGKGKF R+FRLPQNAKV+EVKAAMENG
Sbjct: 61  VKVEVEDGGILQISGERAVEKEEKNEKWHRVERGKGKFTRKFRLPQNAKVDEVKAAMENG 120

Query: 121 VLTVTVPKVPEKKPAVKSVAISG 144
           VLTVT+PKVPEKKPA KS+ I+G
Sbjct: 121 VLTVTIPKVPEKKPATKSIEIAG 143

[Close]

BLAST of CmaCh03G003890 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 202.2 bits (513), Expect = 2.8e-52
Identity = 106/159 (66.67%), Postives = 121/159 (76.10%), Query Frame = 0


Query: 1   MSLIPSVFG--TGSLFDPFLSDIWAP--------------TTASEASSIANTQVDWKETP 60
           MSLIPS+FG    ++FDPF  D+W P              +TA + ++  N +VDWKETP
Sbjct: 1   MSLIPSIFGGRRSNVFDPFSQDLWDPFEGFFTPSSALANASTARDVAAFTNARVDWKETP 60

Query: 61  EAHIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRL 120
           EAH+FKADLPGLKKEEVKVEVED  VLQISGER  E EEKN+KWHRVER  GKF+RRFRL
Sbjct: 61  EAHVFKADLPGLKKEEVKVEVEDKNVLQISGERSKENEEKNDKWHRVERASGKFMRRFRL 120

Query: 121 PQNAKVEEVKAAMENGVLTVTVPKVPEKKPAVKSVAISG 144
           P+NAK+EEVKA MENGVLTV VPK PEKKP VKS+ ISG
Sbjct: 121 PENAKMEEVKATMENGVLTVVVPKAPEKKPQVKSIDISG 159

[Close]

BLAST of CmaCh03G003890 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 196.1 bits (497), Expect = 2.0e-50
Identity = 102/157 (64.97%), Postives = 122/157 (77.71%), Query Frame = 0


Query: 1   MSLIPSVFG--TGSLFDPFLSDIWAP------------TTASEASSIANTQVDWKETPEA 60
           MSLIPS+FG    ++FDPF  D++ P              A + ++  N +VDW+ETPEA
Sbjct: 1   MSLIPSIFGGRRTNVFDPFSLDVFDPFEGFLTPSGLANAPAMDVAAFTNAKVDWRETPEA 60

Query: 61  HIFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQ 120
           H+FKADLPGL+KEEVKVEVEDG +LQISGER  E EEKN+KWHRVER  GKF RRFRLP+
Sbjct: 61  HVFKADLPGLRKEEVKVEVEDGNILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPE 120

Query: 121 NAKVEEVKAAMENGVLTVTVPKVPEKKPAVKSVAISG 144
           NAK+EE+KA+MENGVL+VTVPKVPEKKP VKS+ ISG
Sbjct: 121 NAKMEEIKASMENGVLSVTVPKVPEKKPEVKSIDISG 157

[Close]

BLAST of CmaCh03G003890 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 193.0 bits (489), Expect = 1.7e-49
Identity = 101/156 (64.74%), Postives = 119/156 (76.28%), Query Frame = 0


Query: 1   MSLIPSVFG--TGSLFDPFLSDIWAP-----------TTASEASSIANTQVDWKETPEAH 60
           MSL+PS FG    ++FDPF  D+W P             A + ++  N +VDW+ETPEAH
Sbjct: 1   MSLVPSFFGGRRTNVFDPFSLDVWDPFEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAH 60

Query: 61  IFKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQN 120
           +FKAD+PGLKKEEVKVEVEDG +LQISGER  E EEK++ WHRVER  GKF+RRFRLP+N
Sbjct: 61  VFKADVPGLKKEEVKVEVEDGNILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPEN 120

Query: 121 AKVEEVKAAMENGVLTVTVPKVPEKKPAVKSVAISG 144
           AKVEEVKA+MENGVL+VTVPKV E KP VKSV ISG
Sbjct: 121 AKVEEVKASMENGVLSVTVPKVQESKPEVKSVDISG 156

[Close]

BLAST of CmaCh03G003890 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 184.1 bits (466), Expect = 7.8e-47
Identity = 96/153 (62.75%), Postives = 117/153 (76.47%), Query Frame = 0


Query: 1   MSLIPSVFGT---GSLFDPFLSDIWAP-------TTASEASSIANTQVDWKETPEAHIFK 60
           MS+IPS F      ++FDPF  D+W P       + + E S+I N +VDW+ETPEAH+FK
Sbjct: 1   MSMIPSFFNNNRRSNIFDPFSLDVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFK 60

Query: 61  ADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNAKV 120
           ADLPGLKKEEVKVE+E+  VL+ISGER VEKE+KN+ WHRVER  G+F RRFRLP+N K+
Sbjct: 61  ADLPGLKKEEVKVEIEEDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKM 120

Query: 121 EEVKAAMENGVLTVTVPKVPEKKPAVKSVAISG 144
           ++VKAAMENGVLTVTVPK   KK  VKS+ ISG
Sbjct: 121 DQVKAAMENGVLTVTVPKAETKKADVKSIQISG 153

[Close]

BLAST of CmaCh03G003890 vs. TAIR 10
Match: AT1G07400.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 3.9e-46
Identity = 98/157 (62.42%), Postives = 119/157 (75.80%), Query Frame = 0


Query: 1   MSLIPSVFG----TGSLFDPFLSDIWAP--------TTASEASSIANTQVDWKETPEAHI 60
           MSLIPS FG    + S+FDPF  D+W P        + + E S+I N +VDWKET EAH+
Sbjct: 1   MSLIPSFFGNNRRSNSIFDPFSLDVWDPFKELQFPSSLSGETSAITNARVDWKETAEAHV 60

Query: 61  FKADLPGLKKEEVKVEVEDGGVLQISGERGVEKEEKNEKWHRVERGKGKFLRRFRLPQNA 120
           FKADLPG+KKEEVKVE+ED  VL+ISGER VEKEEK + WHRVER  G+F R+F+LP+N 
Sbjct: 61  FKADLPGMKKEEVKVEIEDDSVLKISGERHVEKEEKQDTWHRVERSSGQFSRKFKLPENV 120

Query: 121 KVEEVKAAMENGVLTVTVPKVPE--KKPAVKSVAISG 144
           K+++VKA+MENGVLTVTVPKV E  KK  VKS+ ISG
Sbjct: 121 KMDQVKASMENGVLTVTVPKVEEAKKKAQVKSIDISG 157

The following BLAST results are available for this feature:

BLAST of CmaCh03G003890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P19037	3.9e-51	66.67	18.1 kDa class I heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP18.1 P...	[more]
P13853	2.8e-49	64.97	17.6 kDa class I heat shock protein 3 OS=Arabidopsis thaliana OX=3702 GN=HSP17.6...	[more]
P30221	4.8e-49	65.58	17.8 kDa class I heat shock protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P27396	1.1e-48	66.24	17.8 kDa class I heat shock protein OS=Daucus carota OX=4039 PE=3 SV=1	[more]
P04793	2.4e-48	64.71	17.5 kDa class I heat shock protein OS=Glycine max OX=3847 GN=HSP17.5-M PE=3 SV=...	[more]

BLAST of CmaCh03G003890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ITR2	6.0e-71	100.00	18.1 kDa class I heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC11147...	[more]
A0A6J1GDY5	5.6e-69	97.90	18.1 kDa class I heat shock protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A5A7TT84	1.6e-63	88.81	18.1 kDa class I heat shock protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BK89	1.6e-63	88.81	18.1 kDa class I heat shock protein-like OS=Cucumis melo OX=3656 GN=LOC103490772...	[more]
A0A0A0L154	1.8e-62	87.41	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G303700 PE=3 S...	[more]

BLAST of CmaCh03G003890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978309.1	1.2e-70	100.00	18.1 kDa class I heat shock protein-like [Cucurbita maxima]	[more]
XP_022950131.1	1.2e-68	97.90	18.1 kDa class I heat shock protein-like [Cucurbita moschata] >XP_023543160.1 18...	[more]
KAG6603616.1	1.2e-68	97.90	17.6 kDa class I heat shock protein 3, partial [Cucurbita argyrosperma subsp. so...	[more]
XP_008448675.1	3.3e-63	88.81	PREDICTED: 18.1 kDa class I heat shock protein-like [Cucumis melo] >KAA0045107.1...	[more]
XP_004147911.1	3.6e-62	87.41	17.6 kDa class I heat shock protein 3 [Cucumis sativus] >KGN54322.1 hypothetical...	[more]

BLAST of CmaCh03G003890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59720.1	2.8e-52	66.67	heat shock protein 18.2	[more]
AT1G53540.1	2.0e-50	64.97	HSP20-like chaperones superfamily protein	[more]
AT3G46230.1	1.7e-49	64.74	heat shock protein 17.4	[more]
AT2G29500.1	7.8e-47	62.75	HSP20-like chaperones superfamily protein	[more]
AT1G07400.1	3.9e-46	62.42	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 39..142 e-value: 2.0E-29 score: 101.7
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 29..143 score: 31.087145
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 8..143 e-value: 1.1E-45 score: 157.0
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 15..143
None	No IPR available	PANTHER	PTHR11527:SF292	17.6 KDA CLASS I HEAT SHOCK PROTEIN-LIKE	coord: 1..143
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 37..128 e-value: 1.57796E-46 score: 144.37
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 1..143

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G003890.1	CmaCh03G003890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding