CmaCh03G003550 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G003550
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr03: 4223887 .. 4225797 (+)
RNA-Seq Expression	CmaCh03G003550
Synteny	CmaCh03G003550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTCTGCTTCATCTTCATCCGTCCATGGCTTCTCTTTCTTTCAGACTGCTTCCTCGTTCTTTCTCTATCTCCAAATATGAAACCCTAGGAACGTCTCTGCGTGCTTCTTCTACTGGTCCTCTCGCAATCTCTACAACTTCGTGTCCTTCTTCAATTCCTGCTGGTATGTAGTTGTTAGCTTGATTCAAGTGTTTTCGTTTCTTCTGTTCACTTTCGATCGCTTAATTTCCGTTCTGTGTGTTTCTTTTTCGGTGTATTGTGGCAGAGGCGATAGGAAAACGGAGAAAGGAAAGCGGTTCAAGCACTCTTTCGGAAATGTATGTGCTCATCTACTCTCTTCGTTTTCTTCTATTCTTTTTCTGACTGTGAGTTTCTCTTTTGTCTTCGATTTGTTCTCTTTCGTTTTTTGTTTTGATTTCTTTTCCGGGGGGGTGGAATGATGAGGCAAGGCCTCGGGACAAGACGAAAGGGAGAGGGACGCCGAGAGTACCAACTCCTCCTTCTCCGCCTAGGAAGGTTAAATTTGATGGCGATGAGAAAATCAAGATCGAGATTGATGAGTCTCTTTTCTCTAGATAATCTTGGAGCATTCTAATTCTGTTTATTTGAATGTGTTTTTAAATTCAGAAGGTACTTCCACTTCTTATATTCGCATTATTCTTATATAAAATTTTCAGCCACTCATTAGCTTCTTGAATCTGTTGTTCGTTTTCAGTCTACTCGAAGGATGGTCCCTCTCTCTCTCTCTCGCCTCCTCTTGCTTTTAACCATTTCCGAGGAAGACTCTGAGTTTTGCTGCTTCATAGATAATCTTTGCGTCACTATCAGGCGTTTGTTTCAAAGGGAATATAAGTAATCTTCCTCACTTCGTCTTATCGAAAGCTAGAGTTGAGCTATTTGAGATTAACGTTAGATTCAAAAAGAGTCTACTAGCTCCTTTTGGTTTTACAAGTTTCTTTTCAATTGTCTTAGTTTGGTTTTACAAACAAGCACAATTGCTTGTTCATCTGCAATGATATGAGCGGAGTTTGGGACGATTTATCCATTACTCTCTCTGTAATAGACTAACAGAGATTACCTAGTTTATTGCACATCGTACTTTTAAAAATATAAACGAAGAGTAATTACGACCTTGGATAGACTGTTTCCTATGACAAACAAACGGTGAAGTAATCTTTGCCGGCTTTTGCAAATGATATATTTCTTAATTTGATTTCAGCCGTCTATGTTGCTTTTTATATGTGTTTTGGAGGTTCTAATGTCTCTCTATAGATAGAAAATGTCTTTCCTGATTCATCAGTATCAGCCAAAGCCTTTTCGATAGCTATGTCAGTATCAGAGATAACTGAGGAGGAAGAAGAGGTATCTAAGTTTATTGATCCTGAAGTCCAAAGGGAAAGAATCCGACAGATACTCAAGTACCAGAAATCTGTGTATTCTTCATCTTCATCTTCCTCTTCTTCTATCTCAACCTCGGCATCATCTTCCAGAAGCTGTAGTTTACTAGACTTGATGAAAGCAGGAAACGCTTCTCTCAGGAGATTATTTGACATGCAGCATACTAGTTTGGCCACCTATTTTGATAAGTACAGTGGATCACCCACGATAAAGCCTATACCATTATGGGGCAGTGATTCTGATGTAGAAATCTGTGATGCTTGGGCATCCATCAAGATCGGACCCTCACATGATTCTAGGTCTCTCGGAACTAATTGCACATCAAATGGTGTTTTCATGGACAGAAACACAGGGCTTCGGAATAGCACGGTAAGGGTTAACAAACACAAGTTAACTAGGAAAAAGTCATTTCGGAAGCTACCTGGATTTGGTCTGCTATGGAGAAGCGGAAGATTTAGAGTCCGGATCAGGTGGAGAGGACTTCGAATTATGATATGTGGTAAAATATTCTAA

mRNA sequence

GCTCTGCTTCATCTTCATCCGTCCATGGCTTCTCTTTCTTTCAGACTGCTTCCTCGTTCTTTCTCTATCTCCAAATATGAAACCCTAGGAACGTCTCTGCGTGCTTCTTCTACTGGTCCTCTCGCAATCTCTACAACTTCGTGTCCTTCTTCAATTCCTGCTGAGGCGATAGGAAAACGGAGAAAGGAAAGCGGTTCAAGCACTCTTTCGGAAATGCCTCGGGACAAGACGAAAGGGAGAGGGACGCCGAGAGTACCAACTCCTCCTTCTCCGCCTAGGAAGATAGAAAATGTCTTTCCTGATTCATCAGTATCAGCCAAAGCCTTTTCGATAGCTATGTCAGTATCAGAGATAACTGAGGAGGAAGAAGAGGTATCTAAGTTTATTGATCCTGAAGTCCAAAGGGAAAGAATCCGACAGATACTCAAGTACCAGAAATCTGTGTATTCTTCATCTTCATCTTCCTCTTCTTCTATCTCAACCTCGGCATCATCTTCCAGAAGCTGTAGTTTACTAGACTTGATGAAAGCAGGAAACGCTTCTCTCAGGAGATTATTTGACATGCAGCATACTAGTTTGGCCACCTATTTTGATAAGTACAGTGGATCACCCACGATAAAGCCTATACCATTATGGGGCAGTGATTCTGATGTAGAAATCTGTGATGCTTGGGCATCCATCAAGATCGGACCCTCACATGATTCTAGGTCTCTCGGAACTAATTGCACATCAAATGGTGTTTTCATGGACAGAAACACAGGGCTTCGGAATAGCACGGTAAGGGTTAACAAACACAAGTTAACTAGGAAAAAGTCATTTCGGAAGCTACCTGGATTTGGTCTGCTATGGAGAAGCGGAAGATTTAGAGTCCGGATCAGGTGGAGAGGACTTCGAATTATGATATGTGGTAAAATATTCTAA

Coding sequence (CDS)

ATGGCTTCTCTTTCTTTCAGACTGCTTCCTCGTTCTTTCTCTATCTCCAAATATGAAACCCTAGGAACGTCTCTGCGTGCTTCTTCTACTGGTCCTCTCGCAATCTCTACAACTTCGTGTCCTTCTTCAATTCCTGCTGAGGCGATAGGAAAACGGAGAAAGGAAAGCGGTTCAAGCACTCTTTCGGAAATGCCTCGGGACAAGACGAAAGGGAGAGGGACGCCGAGAGTACCAACTCCTCCTTCTCCGCCTAGGAAGATAGAAAATGTCTTTCCTGATTCATCAGTATCAGCCAAAGCCTTTTCGATAGCTATGTCAGTATCAGAGATAACTGAGGAGGAAGAAGAGGTATCTAAGTTTATTGATCCTGAAGTCCAAAGGGAAAGAATCCGACAGATACTCAAGTACCAGAAATCTGTGTATTCTTCATCTTCATCTTCCTCTTCTTCTATCTCAACCTCGGCATCATCTTCCAGAAGCTGTAGTTTACTAGACTTGATGAAAGCAGGAAACGCTTCTCTCAGGAGATTATTTGACATGCAGCATACTAGTTTGGCCACCTATTTTGATAAGTACAGTGGATCACCCACGATAAAGCCTATACCATTATGGGGCAGTGATTCTGATGTAGAAATCTGTGATGCTTGGGCATCCATCAAGATCGGACCCTCACATGATTCTAGGTCTCTCGGAACTAATTGCACATCAAATGGTGTTTTCATGGACAGAAACACAGGGCTTCGGAATAGCACGGTAAGGGTTAACAAACACAAGTTAACTAGGAAAAAGTCATTTCGGAAGCTACCTGGATTTGGTCTGCTATGGAGAAGCGGAAGATTTAGAGTCCGGATCAGGTGGAGAGGACTTCGAATTATGATATGTGGTAAAATATTCTAA

Protein sequence

MASLSFRLLPRSFSISKYETLGTSLRASSTGPLAISTTSCPSSIPAEAIGKRRKESGSSTLSEMPRDKTKGRGTPRVPTPPSPPRKIENVFPDSSVSAKAFSIAMSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVYSSSSSSSSSISTSASSSRSCSLLDLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIKIGPSHDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRFRVRIRWRGLRIMICGKIF

Homology

[Close]

BLAST of CmaCh03G003550 vs. ExPASy TrEMBL
Match: A0A6J1ISL5 (uncharacterized protein LOC111478319 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111478319 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 1.2e-97
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 105 MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVYSSSSSSSSSISTSASSSRSCSLL 164
           MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVYSSSSSSSSSISTSASSSRSCSLL
Sbjct: 1   MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVYSSSSSSSSSISTSASSSRSCSLL 60

Query: 165 DLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIKIGPS 224
           DLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIKIGPS
Sbjct: 61  DLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIKIGPS 120

Query: 225 HDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRFRVRI 284
           HDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRFRVRI
Sbjct: 121 HDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRFRVRI 180

Query: 285 RWRGLRIMICG 296
           RWRGLRIMICG
Sbjct: 181 RWRGLRIMICG 191

[Close]

BLAST of CmaCh03G003550 vs. ExPASy TrEMBL
Match: A0A6J1GDZ9 (uncharacterized protein LOC111453292 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453292 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 3.4e-92
Identity = 185/195 (94.87%), Postives = 187/195 (95.90%), Query Frame = 0


Query: 105 MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVY----SSSSSSSSSISTSASSSRS 164
           MSVSE+TEEEEEVSKFIDPEVQ+ERIRQILKYQKSVY    SSSSSSSSSISTSASSSRS
Sbjct: 1   MSVSEVTEEEEEVSKFIDPEVQKERIRQILKYQKSVYSSSSSSSSSSSSSISTSASSSRS 60

Query: 165 CSLLDLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIK 224
           CSLLDLMKAGN SLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIK
Sbjct: 61  CSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIK 120

Query: 225 IGPSHDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRF 284
           IG SHDSRS GTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRF
Sbjct: 121 IGLSHDSRSRGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRF 180

Query: 285 RVRIRWRGLRIMICG 296
           RVRIRWR LRIMICG
Sbjct: 181 RVRIRWRRLRIMICG 195

[Close]

BLAST of CmaCh03G003550 vs. ExPASy TrEMBL
Match: A0A6J1IM99 (uncharacterized protein LOC111478319 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111478319 PE=4 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 6.4e-91
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 105 MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVYSSSSSSSSSISTSASSSRSCSLL 164
           MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVYSSSSSSSSSISTSASSSRSCSLL
Sbjct: 1   MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVYSSSSSSSSSISTSASSSRSCSLL 60

Query: 165 DLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIKIGPS 224
           DLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIKIGPS
Sbjct: 61  DLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIKIGPS 120

Query: 225 HDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRFRVRI 284
           HDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRFRVRI
Sbjct: 121 HDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRFRVRI 180

Query: 285 R 286
           R
Sbjct: 181 R 181

[Close]

BLAST of CmaCh03G003550 vs. ExPASy TrEMBL
Match: A0A6J1GDW9 (uncharacterized protein LOC111453292 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453292 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 2.1e-86
Identity = 176/185 (95.14%), Postives = 178/185 (96.22%), Query Frame = 0


Query: 105 MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVY----SSSSSSSSSISTSASSSRS 164
           MSVSE+TEEEEEVSKFIDPEVQ+ERIRQILKYQKSVY    SSSSSSSSSISTSASSSRS
Sbjct: 1   MSVSEVTEEEEEVSKFIDPEVQKERIRQILKYQKSVYSSSSSSSSSSSSSISTSASSSRS 60

Query: 165 CSLLDLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIK 224
           CSLLDLMKAGN SLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIK
Sbjct: 61  CSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIK 120

Query: 225 IGPSHDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRF 284
           IG SHDSRS GTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRF
Sbjct: 121 IGLSHDSRSRGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRF 180

Query: 285 RVRIR 286
           RVRIR
Sbjct: 181 RVRIR 185

[Close]

BLAST of CmaCh03G003550 vs. ExPASy TrEMBL
Match: A0A0A0L1A7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308620 PE=4 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 2.2e-67
Identity = 150/194 (77.32%), Postives = 161/194 (82.99%), Query Frame = 0


Query: 105 MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVYSSSSSSSSSISTSASSSRSCSLL 164
           M VSEI+EEEE+V +FIDPEVQ+ERIRQILKYQKSVYSSSSSS S  S+S SS R  SLL
Sbjct: 1   MPVSEISEEEEDVPRFIDPEVQKERIRQILKYQKSVYSSSSSSLS--SSSKSSCRGSSLL 60

Query: 165 DLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIKIGPS 224
           DLMKAGN SLRRLF+MQHTSLATYF KYSGSP IK IPLWGSDSDVEI DAWAS+KIG S
Sbjct: 61  DLMKAGNTSLRRLFEMQHTSLATYFRKYSGSPMIKSIPLWGSDSDVEIFDAWASVKIGLS 120

Query: 225 HDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRFRVRI 284
           HDS S  TNCTS G  +DR TGL NST+ V+K KLTRKKSFRKLP F LLW S RFRVR 
Sbjct: 121 HDSGSHTTNCTSTGYSIDRKTGLGNSTISVSKLKLTRKKSFRKLPRFCLLWSSKRFRVRF 180

Query: 285 RWRGLRIMICGKIF 299
           R R LRI+ICGK F
Sbjct: 181 RLRRLRILICGKQF 192

[Close]

BLAST of CmaCh03G003550 vs. NCBI nr
Match: XP_022978287.1 (uncharacterized protein LOC111478319 isoform X2 [Cucurbita maxima] >XP_022978288.1 uncharacterized protein LOC111478319 isoform X2 [Cucurbita maxima] >XP_022978289.1 uncharacterized protein LOC111478319 isoform X2 [Cucurbita maxima])

HSP 1 Score: 366.3 bits (939), Expect = 2.5e-97
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0


Query: 105 MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVYSSSSSSSSSISTSASSSRSCSLL 164
           MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVYSSSSSSSSSISTSASSSRSCSLL
Sbjct: 1   MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVYSSSSSSSSSISTSASSSRSCSLL 60

Query: 165 DLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIKIGPS 224
           DLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIKIGPS
Sbjct: 61  DLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIKIGPS 120

Query: 225 HDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRFRVRI 284
           HDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRFRVRI
Sbjct: 121 HDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRFRVRI 180

Query: 285 RWRGLRIMICG 296
           RWRGLRIMICG
Sbjct: 181 RWRGLRIMICG 191

[Close]

BLAST of CmaCh03G003550 vs. NCBI nr
Match: XP_022950113.1 (uncharacterized protein LOC111453292 isoform X2 [Cucurbita moschata])

HSP 1 Score: 348.2 bits (892), Expect = 7.0e-92
Identity = 185/195 (94.87%), Postives = 187/195 (95.90%), Query Frame = 0


Query: 105 MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVY----SSSSSSSSSISTSASSSRS 164
           MSVSE+TEEEEEVSKFIDPEVQ+ERIRQILKYQKSVY    SSSSSSSSSISTSASSSRS
Sbjct: 1   MSVSEVTEEEEEVSKFIDPEVQKERIRQILKYQKSVYSSSSSSSSSSSSSISTSASSSRS 60

Query: 165 CSLLDLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIK 224
           CSLLDLMKAGN SLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIK
Sbjct: 61  CSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIK 120

Query: 225 IGPSHDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRF 284
           IG SHDSRS GTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRF
Sbjct: 121 IGLSHDSRSRGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRF 180

Query: 285 RVRIRWRGLRIMICG 296
           RVRIRWR LRIMICG
Sbjct: 181 RVRIRWRRLRIMICG 195

[Close]

BLAST of CmaCh03G003550 vs. NCBI nr
Match: XP_022978286.1 (uncharacterized protein LOC111478319 isoform X1 [Cucurbita maxima])

HSP 1 Score: 344.0 bits (881), Expect = 1.3e-90
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 105 MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVYSSSSSSSSSISTSASSSRSCSLL 164
           MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVYSSSSSSSSSISTSASSSRSCSLL
Sbjct: 1   MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVYSSSSSSSSSISTSASSSRSCSLL 60

Query: 165 DLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIKIGPS 224
           DLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIKIGPS
Sbjct: 61  DLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIKIGPS 120

Query: 225 HDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRFRVRI 284
           HDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRFRVRI
Sbjct: 121 HDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRFRVRI 180

Query: 285 R 286
           R
Sbjct: 181 R 181

[Close]

BLAST of CmaCh03G003550 vs. NCBI nr
Match: XP_023543295.1 (serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 340.9 bits (873), Expect = 1.1e-89
Identity = 182/199 (91.46%), Postives = 185/199 (92.96%), Query Frame = 0


Query: 105 MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVY--------SSSSSSSSSISTSAS 164
           MSVSEITE+EEEVSKFIDPEVQ+ERIRQILKYQKSVY        SSSSSSSSSISTSAS
Sbjct: 1   MSVSEITEDEEEVSKFIDPEVQKERIRQILKYQKSVYSSSSSSSSSSSSSSSSSISTSAS 60

Query: 165 SSRSCSLLDLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAW 224
           SSRSCSLLDLMKAGN SLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVE CDAW
Sbjct: 61  SSRSCSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVETCDAW 120

Query: 225 ASIKIGPSHDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWR 284
           ASIKIG SHDSRS GTNCTSNG+FMDRNTG RNSTVRVNKHKLTRKKSFRKLPGFGLLWR
Sbjct: 121 ASIKIGLSHDSRSRGTNCTSNGIFMDRNTGPRNSTVRVNKHKLTRKKSFRKLPGFGLLWR 180

Query: 285 SGRFRVRIRWRGLRIMICG 296
           SGRFRVRIRWR LRIMICG
Sbjct: 181 SGRFRVRIRWRRLRIMICG 199

[Close]

BLAST of CmaCh03G003550 vs. NCBI nr
Match: XP_022950112.1 (uncharacterized protein LOC111453292 isoform X1 [Cucurbita moschata])

HSP 1 Score: 328.9 bits (842), Expect = 4.4e-86
Identity = 176/185 (95.14%), Postives = 178/185 (96.22%), Query Frame = 0


Query: 105 MSVSEITEEEEEVSKFIDPEVQRERIRQILKYQKSVY----SSSSSSSSSISTSASSSRS 164
           MSVSE+TEEEEEVSKFIDPEVQ+ERIRQILKYQKSVY    SSSSSSSSSISTSASSSRS
Sbjct: 1   MSVSEVTEEEEEVSKFIDPEVQKERIRQILKYQKSVYSSSSSSSSSSSSSISTSASSSRS 60

Query: 165 CSLLDLMKAGNASLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIK 224
           CSLLDLMKAGN SLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIK
Sbjct: 61  CSLLDLMKAGNTSLRRLFDMQHTSLATYFDKYSGSPTIKPIPLWGSDSDVEICDAWASIK 120

Query: 225 IGPSHDSRSLGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRF 284
           IG SHDSRS GTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRF
Sbjct: 121 IGLSHDSRSRGTNCTSNGVFMDRNTGLRNSTVRVNKHKLTRKKSFRKLPGFGLLWRSGRF 180

Query: 285 RVRIR 286
           RVRIR
Sbjct: 181 RVRIR 185

The following BLAST results are available for this feature:

BLAST of CmaCh03G003550 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G003550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ISL5	1.2e-97	100.00	uncharacterized protein LOC111478319 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GDZ9	3.4e-92	94.87	uncharacterized protein LOC111453292 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IM99	6.4e-91	100.00	uncharacterized protein LOC111478319 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GDW9	2.1e-86	95.14	uncharacterized protein LOC111453292 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0L1A7	2.2e-67	77.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G308620 PE=4 SV=1	[more]

BLAST of CmaCh03G003550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022978287.1	2.5e-97	100.00	uncharacterized protein LOC111478319 isoform X2 [Cucurbita maxima] >XP_022978288...	[more]
XP_022950113.1	7.0e-92	94.87	uncharacterized protein LOC111453292 isoform X2 [Cucurbita moschata]	[more]
XP_022978286.1	1.3e-90	100.00	uncharacterized protein LOC111478319 isoform X1 [Cucurbita maxima]	[more]
XP_023543295.1	1.1e-89	91.46	serine/threonine-protein phosphatase 4 regulatory subunit 3-like isoform X2 [Cuc...	[more]
XP_022950112.1	4.4e-86	95.14	uncharacterized protein LOC111453292 isoform X1 [Cucurbita moschata]	[more]

BLAST of CmaCh03G003550 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 48..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G003550.1	CmaCh03G003550.1	mRNA