CmaCh03G002870 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G002870
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	thioredoxin H-type-like
Location	Cma_Chr03: 3801043 .. 3804351 (+)
RNA-Seq Expression	CmaCh03G002870
Synteny	CmaCh03G002870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGGCTCCTTATCCATTTGTTTGTTGATTGATGAACTTTGCAGTTTGTCAACGTTCTTAACTTTTAAGGTTATTTTAGCACTGTGATAAAAGTGGAGCTAGTCTTTGTTTGGTGTCTTTTCCCCAGAATTTGTAACATGTCTGTGAATTAAATGTTATGTTTCCTTCCCTTGATAGCATATGGTTATACTGATATTTTCTTTTCGTTATTTCAGGCTAACCTGTGGTACCTAGGACACTTCAAACATCTGCACTTGGACCGCCAAATGGGACTTTGTGCTAGTAAGGTAAGAGCCATTTGGAACATTTAATCTAGTAATGTTAGTAGAGGACTTTCTGTTGGTTTGTCGTGTTGGATTGATGTTTGTACCTGGAACTTTTTTTTAATCAATTGTGATACCTAAATATAATATTATGGATTAGGCCGAAGTTGTGAGTTAGAACGGGGGAATGATTAAATGTGGACTATAAATTAACAGCCTAAAGAATCTGGCTAGAGCCTGGCTCCGTGAGGTTCAAAGGAGGACTAGATATGTGAGATCCCATATCGGTTGGAGAGGAGAACGAAACATTCTTTATAAGGGTGTGAAAATCTGTCCCTAGTAGACGCGTTTAAAAACCTTAAGGGGAAACTTGAAAGGGAAAGGCCAAAGAGGACACTATCTGCTAGCGGTGGGCTTAGGCTGTTGTAAATGGTATCAAAGCTAGATATGGGGCGATGTGCAGTGAGGAGGTTGAGTCCTAAAAGGGAGTGGACACGAGGCGGTGTGCCAACAAGGACGTTGGGCCTCGAAGGGGGTGGATTGGGGGGTCCCACATCGATTGGAGAAGGGAACGAGTGCCAGTGAGGGTACTGGGCCTTGAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGAGAATGAAACATTGTTTATAAGGGTGTAGAAACCTCTCCCTAGTAGACGTGTTTTAAAAACCTTAAGGGGAAGCCTGAAAGGGAAAGCTCGAAGAGGACACTATCTACTAACGGTAGGCTTGGGCGGTTACAAATAGTATCAGAGCTAGACATGGGGCGATGTGCAGTGAGGAGGTTGAGTCTTGAAAGGGGGTGGACACGAGGTGGTGTGCCAACAAGGACGCTGGGCCTCGAAGGGGGTGGATTGGGGGGTCCCATATCGATTGGAGAAGGGAACGAGTGCCAGTGAGGGCGCTAGGCCCTGAAGGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAGCATTCTTTATAAGGGTGTGAAAATCTCTCCTTAGCAGACGTGTTTTAAAAACCTTGAAGGAAAGCTCAAAGAGGACAATATCTACTAGCGATGGGCTTGGGCTTGGGCTGTTGGCCCTATTTGTTGGAATATTGTTGAAGATGGTGCTTTATAGTCATTAGCATTATACCTTAGAAGGGTACTATTCAACATTTTCCACAGTTATACACTGACTTCAGCAATGCCCCAAAACTTCTATTCTACCCGACCTTTTGTCAGCTCCTCGTAATTTTGTGTCGATGATCCTATAAAATAGAAAAAGGATCATTTCTGAGATTTCGGCGCACTGCCTGTTTTATGCTCGTTAACGTTCATCTAACTGGGAAGTTTTTGTGTTCCCTTTTTCTAGTCCGAAACCAAAGACGATGAGTCTGAGCATCATGTCGAGTTTGCCACCGGAAATGTGCAGCTCATCACAACCAAAGAAGCTTGGGAGCAAAAGTTGGAAGAAGCTAATAAGGATGGCAAAATTGTAAGATTTTGTTTAGTTTATTGCCTTTGAGCACTGCTGTTGTTTCTGGATGTTATCTCGTAGATAAAATCAGGCCCGTTCGTGTTCGTTTCTTTAATTATTTATCGGGACGATGCAGAGAGTATAATAGATAGTCTATTTTATGTCATGTCCTTATTTTGTTGCTCAGTTCTTTGCAAGGGAGGTGGGCTTGATCCTCCCCTGCCTTTGGTAATGAAAATTCTCTTATCAAAACGGGTTTAATCCTTTCGTAATCGAGATTATGCATCCACAGGTGATAGCGAACTTCAGTGCATGGTGGTGTGGTCCTTGCAAGGTGGTTGCTCCATTCTACAGCGAATTGTCGGAGAAATATCCGTCTTTGATGTTCCTAGTAGTCGATGTTGATGAATTAACTGTGAGTAATGAAGTACAATATCATTTATGGAAGAATTTATTCAACTCTTAGTTTTCATTTTCTTTCTTGTTCTTGTACGTTGGGAATGCATTGTTTTTGTCAATCTGAACATAGCTCAATTGGTAAGATACTAACTATCGTCAACTCAGTAGATATGTGAGATCCCACATTGGTTGGAAAGTGGAACAAAACATTTCTTATAAGGGTGTGAAAGCATCTCCCTAGTAGACACGTTTAAAACCGTGAGGCTAACGCGATACGTAATAGGCCAAAGCGGACAATATTTGCTAGCGGTAGGTTTGAGCTGTTACAAATGGTATCAGAGTTAGACACCATGCAGTGTGTCAGCGAGAACGTTGGGCCTCCAAAGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACGAAACATTTCTTATAAGGGTGTGAAAACATCTCCTTAGTAGATGCGTACTGTGAGGTGTGATACGTAATGGGCCAAAGCAGATAATATTTACTAGCGGTGGACTTGAGCTTTTATAATTGATATTAGAGCTAGACACCGGGCTGTGCTAGCGAGAACGCTGGCCCCCAAGGAGGGTGGATTGTGAGGTGAAGCTTGTCTAATTCACTACCCCTCCGTTCATGTCATATTCAGGTATAGATTAAGCCTGTTTGGGCTACATTTCTCAGCATATGCTTTGGTGTGTTGCAGGACTTCAGCACCACTTGGGATATCAAAGCTACTCCTACCTTTTTCTTCCTCAAAGAAGGACAGCAAATCGACAAGCTCGTCGGGGCGAATAAACCCGAACTAGAGCTGAAAGTCACTGCTTTAGCGGATTCTCTTCCTCCCAATCAAGTATGACTTCTGGTAAATATCATTATGAACCCTGCAAGTATCTTCCTTGTATTGTGGATTTATGGTGTTTTTCCCCTTTGTATAATGCTACGCCCTCTTATTAAGTGTAGACATGTGAGGTTGGCTATGAGTAATATTTATTTTTAACTCATTGGAACTCTTGTAAAGCTTTAGGCTTTTAATAATTCTTCCCCTTTGCAAAGAAAAAAAAAATGGATGGATCATTTGAATCCTTTTCTGTGACTTTACTTGTTCGGGATCTGTTTTATAGGTCGTATAATTGTGTCCTTGAGTTTCAA

mRNA sequence

ATTGGCTCCTTATCCATTTGTTTGTTGATTGATGAACTTTGCAGTTTGTCAACGTTCTTAACTTTTAAGGCTAACCTGTGGTACCTAGGACACTTCAAACATCTGCACTTGGACCGCCAAATGGGACTTTGTGCTAGTAAGTCCGAAACCAAAGACGATGAGTCTGAGCATCATGTCGAGTTTGCCACCGGAAATGTGCAGCTCATCACAACCAAAGAAGCTTGGGAGCAAAAGTTGGAAGAAGCTAATAAGGATGGCAAAATTGTGATAGCGAACTTCAGTGCATGGTGGTGTGGTCCTTGCAAGGTGGTTGCTCCATTCTACAGCGAATTGTCGGAGAAATATCCGTCTTTGATGTTCCTAGTAGTCGATGTTGATGAATTAACTGACTTCAGCACCACTTGGGATATCAAAGCTACTCCTACCTTTTTCTTCCTCAAAGAAGGACAGCAAATCGACAAGCTCGTCGGGGCGAATAAACCCGAACTAGAGCTGAAAGTCACTGCTTTAGCGGATTCTCTTCCTCCCAATCAAGTATGACTTCTGGTAAATATCATTATGAACCCTGCAAGTATCTTCCTTGTATTGTGGATTTATGGTGTTTTTCCCCTTTGTATAATGCTACGCCCTCTTATTAAGTGTAGACATGTGAGGTTGGCTATGAGTAATATTTATTTTTAACTCATTGGAACTCTTGTAAAGCTTTAGGCTTTTAATAATTCTTCCCCTTTGCAAAGAAAAAAAAAATGGATGGATCATTTGAATCCTTTTCTGTGACTTTACTTGTTCGGGATCTGTTTTATAGGTCGTATAATTGTGTCCTTGAGTTTCAA

Coding sequence (CDS)

ATTGGCTCCTTATCCATTTGTTTGTTGATTGATGAACTTTGCAGTTTGTCAACGTTCTTAACTTTTAAGGCTAACCTGTGGTACCTAGGACACTTCAAACATCTGCACTTGGACCGCCAAATGGGACTTTGTGCTAGTAAGTCCGAAACCAAAGACGATGAGTCTGAGCATCATGTCGAGTTTGCCACCGGAAATGTGCAGCTCATCACAACCAAAGAAGCTTGGGAGCAAAAGTTGGAAGAAGCTAATAAGGATGGCAAAATTGTGATAGCGAACTTCAGTGCATGGTGGTGTGGTCCTTGCAAGGTGGTTGCTCCATTCTACAGCGAATTGTCGGAGAAATATCCGTCTTTGATGTTCCTAGTAGTCGATGTTGATGAATTAACTGACTTCAGCACCACTTGGGATATCAAAGCTACTCCTACCTTTTTCTTCCTCAAAGAAGGACAGCAAATCGACAAGCTCGTCGGGGCGAATAAACCCGAACTAGAGCTGAAAGTCACTGCTTTAGCGGATTCTCTTCCTCCCAATCAAGTATGA

Protein sequence

IGSLSICLLIDELCSLSTFLTFKANLWYLGHFKHLHLDRQMGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQV

Homology

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BLAST of CmaCh03G002870 vs. ExPASy Swiss-Prot
Match: P85801 (Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.6e-55
Identity = 97/137 (70.80%), Postives = 116/137 (84.67%), Query Frame = 0


Query: 41  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGP 100
           MGLC +K     D+ E H+E A GNV LITTKE W+QKL EA++DGKIV+ANFSA WCGP
Sbjct: 1   MGLCLAKRNHDADDDEPHIELAGGNVHLITTKERWDQKLSEASRDGKIVLANFSARWCGP 60

Query: 101 CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 160
           CK +AP+Y ELSE YPSLMFLV+DVDEL+DFS +W+IKATPTFFFL++GQQ+DKLVGANK
Sbjct: 61  CKQIAPYYIELSENYPSLMFLVIDVDELSDFSASWEIKATPTFFFLRDGQQVDKLVGANK 120

Query: 161 PELELKVTALADSLPPN 178
           PEL  K+TA+ DSLPP+
Sbjct: 121 PELHKKITAILDSLPPS 137

[Close]

BLAST of CmaCh03G002870 vs. ExPASy Swiss-Prot
Match: Q9C9Y6 (Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 5.2e-53
Identity = 98/135 (72.59%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 41  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGP 100
           MG C SK +  DD+S H+VEF+ GNV LITTKE+W+ KL EA++DGKIV+ANFSA WCGP
Sbjct: 1   MGSCVSKGK-GDDDSVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGP 60

Query: 101 CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 160
           CK+VAPF+ ELSEK+ SLMFL+VDVDEL+DFS++WDIKATPTFFFLK GQQI KLVGANK
Sbjct: 61  CKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANK 120

Query: 161 PELELKVTALADSLP 176
           PEL+ KVT++ DS+P
Sbjct: 121 PELQKKVTSIIDSVP 134

[Close]

BLAST of CmaCh03G002870 vs. ExPASy Swiss-Prot
Match: Q9AS75 (Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.3e-47
Identity = 88/133 (66.17%), Postives = 107/133 (80.45%), Query Frame = 0


Query: 41  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGP 100
           MG C  K E  D+E +  ++F  GNV +I+ KE W+ K+ EANKDGKIVIANFSA WCGP
Sbjct: 1   MGSCVGK-ERSDEEDK--IDFKGGNVHVISNKENWDHKIAEANKDGKIVIANFSAAWCGP 60

Query: 101 CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 160
           C+V+AP Y+E+S+ YP  MFL +DVDEL DFS++WDI+ATPTFFFLK G+Q+DKLVGANK
Sbjct: 61  CRVIAPVYAEMSQTYPQFMFLTIDVDELMDFSSSWDIRATPTFFFLKNGEQVDKLVGANK 120

Query: 161 PELELKVTALADS 174
           PELE KV ALADS
Sbjct: 121 PELEKKVAALADS 130

[Close]

BLAST of CmaCh03G002870 vs. ExPASy Swiss-Prot
Match: Q0DKF1 (Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 6.2e-46
Identity = 84/132 (63.64%), Postives = 107/132 (81.06%), Query Frame = 0


Query: 41  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGP 100
           MG C  K     +E +  ++F  GNV +IT+KE W++K+EEANKDGKIV+ANFSA WCGP
Sbjct: 1   MGGCVGKGRRHIEEDK--LDFKGGNVHVITSKEDWDRKIEEANKDGKIVVANFSASWCGP 60

Query: 101 CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 160
           C+V+AP Y+E+S+ YP LMFL +DVD+L DFS++WDI+ATPTFFF+K  +Q+DKLVGANK
Sbjct: 61  CRVIAPIYAEMSKTYPQLMFLTIDVDDLMDFSSSWDIRATPTFFFIKNEKQVDKLVGANK 120

Query: 161 PELELKVTALAD 173
           PELE KV ALAD
Sbjct: 121 PELEKKVQALAD 130

[Close]

BLAST of CmaCh03G002870 vs. ExPASy Swiss-Prot
Match: Q9LXZ8 (Putative thioredoxin H10 OS=Arabidopsis thaliana OX=3702 GN=At3g56420 PE=3 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-29
Identity = 58/129 (44.96%), Postives = 83/129 (64.34%), Query Frame = 0


Query: 44  CASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGPCKV 103
           C S +             + G V  ++  E WE+K+ EAN  GKI++ NFSA WC PCK 
Sbjct: 20  CCSNNNNNSYGQTRSQHGSKGKVHPVSRIEKWEEKITEANNHGKILVVNFSAPWCVPCKK 79

Query: 104 VAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANKPEL 163
           + P + +L+ +YPS++F+ VDV+EL +FS  W+++ATPT  FLK+G+Q+DKLVGA   EL
Sbjct: 80  IEPVFRDLASRYPSMIFVTVDVEELAEFSNEWNVEATPTVVFLKDGRQMDKLVGAETSEL 139

Query: 164 ELKVTALAD 173
           + K  A AD
Sbjct: 140 QKKTAAAAD 148

[Close]

BLAST of CmaCh03G002870 vs. ExPASy TrEMBL
Match: A0A6J1IPQ7 (thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111478337 PE=4 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.5e-74
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 41  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGP 100
           MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGP
Sbjct: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGP 60

Query: 101 CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 160
           CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK
Sbjct: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120

Query: 161 PELELKVTALADSLPPNQV 180
           PELELKVTALADSLPPNQV
Sbjct: 121 PELELKVTALADSLPPNQV 139

[Close]

BLAST of CmaCh03G002870 vs. ExPASy TrEMBL
Match: A0A6J1GEY7 (thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111453320 PE=4 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 1.1e-72
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 41  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGP 100
           MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQK+EEANKDGKIVIANFSA WCGP
Sbjct: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60

Query: 101 CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 160
           CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK
Sbjct: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120

Query: 161 PELELKVTALADSLPPNQV 180
           PELELKVTALADSLPPNQV
Sbjct: 121 PELELKVTALADSLPPNQV 139

[Close]

BLAST of CmaCh03G002870 vs. ExPASy TrEMBL
Match: A0A5A7SL29 (Thioredoxin H-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00370 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.0e-63
Identity = 120/139 (86.33%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 41  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGP 100
           MGLC SKSET+DD+SEHHVEFA GNV LITTKE+W+QKLEEAN  GKIVIANFSA WCGP
Sbjct: 1   MGLCFSKSETRDDDSEHHVEFAAGNVHLITTKESWDQKLEEANTSGKIVIANFSATWCGP 60

Query: 101 CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 160
           CKVVAPFYSELSEKY SLMFLVVDVDELTDFST+WDIKATPTFFFLKEGQQIDKLVGANK
Sbjct: 61  CKVVAPFYSELSEKYESLMFLVVDVDELTDFSTSWDIKATPTFFFLKEGQQIDKLVGANK 120

Query: 161 PELELKVTALADSLPPNQV 180
            ELE K+ A+ADSLPPN++
Sbjct: 121 IELEKKIIAVADSLPPNRI 139

[Close]

BLAST of CmaCh03G002870 vs. ExPASy TrEMBL
Match: A0A0A0L068 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G334700 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.0e-63
Identity = 120/139 (86.33%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 41  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGP 100
           MGLC SK+ETKDD+S+HHVEFA G V LITTKEAW+QKLEEAN  GKIVIANFSA WCGP
Sbjct: 1   MGLCFSKAETKDDDSDHHVEFAAGKVHLITTKEAWDQKLEEANTSGKIVIANFSATWCGP 60

Query: 101 CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 160
           CKVVAPFYSELSEKY SLMFLVVDVDELTDFST+WDIKATPTFFFLKEGQQIDKLVGANK
Sbjct: 61  CKVVAPFYSELSEKYESLMFLVVDVDELTDFSTSWDIKATPTFFFLKEGQQIDKLVGANK 120

Query: 161 PELELKVTALADSLPPNQV 180
            ELE K+TA+ADSLPPN++
Sbjct: 121 IELEKKITAVADSLPPNRI 139

[Close]

BLAST of CmaCh03G002870 vs. ExPASy TrEMBL
Match: A0A1S3CKE7 (thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103501473 PE=4 SV=1)

HSP 1 Score: 251.9 bits (642), Expect = 2.0e-63
Identity = 120/139 (86.33%), Postives = 129/139 (92.81%), Query Frame = 0


Query: 41  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGP 100
           MGLC SKSET+DD+SEHHVEFA GNV LITTKE+W+QKLEEAN  GKIVIANFSA WCGP
Sbjct: 1   MGLCFSKSETRDDDSEHHVEFAAGNVHLITTKESWDQKLEEANTSGKIVIANFSATWCGP 60

Query: 101 CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 160
           CKVVAPFYSELSEKY SLMFLVVDVDELTDFST+WDIKATPTFFFLKEGQQIDKLVGANK
Sbjct: 61  CKVVAPFYSELSEKYESLMFLVVDVDELTDFSTSWDIKATPTFFFLKEGQQIDKLVGANK 120

Query: 161 PELELKVTALADSLPPNQV 180
            ELE K+ A+ADSLPPN++
Sbjct: 121 IELEKKIIAVADSLPPNRI 139

[Close]

BLAST of CmaCh03G002870 vs. NCBI nr
Match: KAG6603527.1 (Ubiquitin-conjugating enzyme E2 28, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 316.2 bits (809), Expect = 1.8e-82
Identity = 153/158 (96.84%), Postives = 156/158 (98.73%), Query Frame = 0


Query: 23  KANLWYLGHFK-HLHLDRQMGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEE 82
           +ANLWYLGHF+ HLHLDRQMGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQK+EE
Sbjct: 189 RANLWYLGHFEHHLHLDRQMGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEE 248

Query: 83  ANKDGKIVIANFSAWWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATP 142
           ANKDGKIVIANFSA WCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATP
Sbjct: 249 ANKDGKIVIANFSASWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATP 308

Query: 143 TFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQV 180
           TFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQV
Sbjct: 309 TFFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQV 346

[Close]

BLAST of CmaCh03G002870 vs. NCBI nr
Match: XP_022978310.1 (thioredoxin H-type-like [Cucurbita maxima] >XP_022978312.1 thioredoxin H-type-like [Cucurbita maxima])

HSP 1 Score: 288.9 bits (738), Expect = 3.0e-74
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0


Query: 41  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGP 100
           MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGP
Sbjct: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGP 60

Query: 101 CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 160
           CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK
Sbjct: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120

Query: 161 PELELKVTALADSLPPNQV 180
           PELELKVTALADSLPPNQV
Sbjct: 121 PELELKVTALADSLPPNQV 139

[Close]

BLAST of CmaCh03G002870 vs. NCBI nr
Match: XP_022950143.1 (thioredoxin H-type-like [Cucurbita moschata] >XP_022950144.1 thioredoxin H-type-like [Cucurbita moschata] >XP_023543289.1 thioredoxin H-type-like [Cucurbita pepo subsp. pepo] >XP_023543290.1 thioredoxin H-type-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.7 bits (722), Expect = 2.2e-72
Identity = 137/139 (98.56%), Postives = 138/139 (99.28%), Query Frame = 0


Query: 41  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGP 100
           MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQK+EEANKDGKIVIANFSA WCGP
Sbjct: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60

Query: 101 CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 160
           CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK
Sbjct: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120

Query: 161 PELELKVTALADSLPPNQV 180
           PELELKVTALADSLPPNQV
Sbjct: 121 PELELKVTALADSLPPNQV 139

[Close]

BLAST of CmaCh03G002870 vs. NCBI nr
Match: KAG7033711.1 (hypothetical protein SDJN02_03436, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 281.2 bits (718), Expect = 6.3e-72
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 41  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGP 100
           MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQK+EEANKDGKIVIANFSA WCGP
Sbjct: 1   MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKMEEANKDGKIVIANFSASWCGP 60

Query: 101 CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 160
           CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK
Sbjct: 61  CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 120

Query: 161 PELELKVTALADSLPPNQ 179
           PELELKVTALADSLPPNQ
Sbjct: 121 PELELKVTALADSLPPNQ 138

[Close]

BLAST of CmaCh03G002870 vs. NCBI nr
Match: KAG6595640.1 (hypothetical protein SDJN03_12193, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 267.3 bits (682), Expect = 9.4e-68
Identity = 122/156 (78.21%), Postives = 140/156 (89.74%), Query Frame = 0


Query: 23  KANLWYLGHFKHLHLDRQMGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEA 82
           +  LW++GHF+ LH+DRQMGLC SK + KD+ESEHHVEF  GNV LITTK AW+QKLEEA
Sbjct: 27  RPTLWFIGHFEILHVDRQMGLCCSKPDIKDEESEHHVEFGAGNVHLITTKVAWDQKLEEA 86

Query: 83  NKDGKIVIANFSAWWCGPCKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPT 142
             DGKIVIANFSA WCGPCK++APFY ELSEKYPSLMFLVVDVDEL+DFST+WDIKATPT
Sbjct: 87  RSDGKIVIANFSATWCGPCKMIAPFYCELSEKYPSLMFLVVDVDELSDFSTSWDIKATPT 146

Query: 143 FFFLKEGQQIDKLVGANKPELELKVTALADSLPPNQ 179
           FFFLK+GQQIDKLVGANKPEL+ K+TA+ADSL P++
Sbjct: 147 FFFLKDGQQIDKLVGANKPELQQKITAMADSLVPDR 182

[Close]

BLAST of CmaCh03G002870 vs. TAIR 10
Match: AT3G08710.1 (thioredoxin H-type 9 )

HSP 1 Score: 208.8 bits (530), Expect = 3.7e-54
Identity = 98/135 (72.59%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 41  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGP 100
           MG C SK +  DD+S H+VEF+ GNV LITTKE+W+ KL EA++DGKIV+ANFSA WCGP
Sbjct: 1   MGSCVSKGK-GDDDSVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGP 60

Query: 101 CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 160
           CK+VAPF+ ELSEK+ SLMFL+VDVDEL+DFS++WDIKATPTFFFLK GQQI KLVGANK
Sbjct: 61  CKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANK 120

Query: 161 PELELKVTALADSLP 176
           PEL+ KVT++ DS+P
Sbjct: 121 PELQKKVTSIIDSVP 134

[Close]

BLAST of CmaCh03G002870 vs. TAIR 10
Match: AT3G08710.2 (thioredoxin H-type 9 )

HSP 1 Score: 208.8 bits (530), Expect = 3.7e-54
Identity = 98/135 (72.59%), Postives = 118/135 (87.41%), Query Frame = 0


Query: 41  MGLCASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGP 100
           MG C SK +  DD+S H+VEF+ GNV LITTKE+W+ KL EA++DGKIV+ANFSA WCGP
Sbjct: 1   MGSCVSKGK-GDDDSVHNVEFSGGNVHLITTKESWDDKLAEADRDGKIVVANFSATWCGP 60

Query: 101 CKVVAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANK 160
           CK+VAPF+ ELSEK+ SLMFL+VDVDEL+DFS++WDIKATPTFFFLK GQQI KLVGANK
Sbjct: 61  CKIVAPFFIELSEKHSSLMFLLVDVDELSDFSSSWDIKATPTFFFLKNGQQIGKLVGANK 120

Query: 161 PELELKVTALADSLP 176
           PEL+ KVT++ DS+P
Sbjct: 121 PELQKKVTSIIDSVP 134

[Close]

BLAST of CmaCh03G002870 vs. TAIR 10
Match: AT3G56420.1 (Thioredoxin superfamily protein )

HSP 1 Score: 131.0 bits (328), Expect = 9.8e-31
Identity = 58/129 (44.96%), Postives = 83/129 (64.34%), Query Frame = 0


Query: 44  CASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGPCKV 103
           C S +             + G V  ++  E WE+K+ EAN  GKI++ NFSA WC PCK 
Sbjct: 20  CCSNNNNNSYGQTRSQHGSKGKVHPVSRIEKWEEKITEANNHGKILVVNFSAPWCVPCKK 79

Query: 104 VAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANKPEL 163
           + P + +L+ +YPS++F+ VDV+EL +FS  W+++ATPT  FLK+G+Q+DKLVGA   EL
Sbjct: 80  IEPVFRDLASRYPSMIFVTVDVEELAEFSNEWNVEATPTVVFLKDGRQMDKLVGAETSEL 139

Query: 164 ELKVTALAD 173
           + K  A AD
Sbjct: 140 QKKTAAAAD 148

[Close]

BLAST of CmaCh03G002870 vs. TAIR 10
Match: AT2G40790.1 (C-terminal cysteine residue is changed to a serine 2 )

HSP 1 Score: 125.2 bits (313), Expect = 5.4e-29
Identity = 56/131 (42.75%), Postives = 81/131 (61.83%), Query Frame = 0


Query: 44  CASKSETKDDESEHHVEFATGNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGPCKV 103
           C ++       S+    F  G V  ++  E WE+K+ EAN  GKI++ NF A WC P K 
Sbjct: 20  CCNRRNKTQARSQKGSYFIKGKVHPVSRMEKWEEKITEANSHGKILVVNFKASWCLPSKT 79

Query: 104 VAPFYSELSEKYPSLMFLVVDVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANKPEL 163
           + P Y EL+  Y S++F+ +DV+EL +FS  W++ ATPT  FLK+G+Q+DKLVG +  EL
Sbjct: 80  ILPIYQELASTYTSMIFVTIDVEELAEFSHEWNVDATPTVVFLKDGRQMDKLVGGDAAEL 139

Query: 164 ELKVTALADSL 175
           + K  A A+ L
Sbjct: 140 QKKTAAAANLL 150

[Close]

BLAST of CmaCh03G002870 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 )

HSP 1 Score: 115.2 bits (287), Expect = 5.6e-26
Identity = 48/101 (47.52%), Postives = 74/101 (73.27%), Query Frame = 0


Query: 64  GNVQLITTKEAWEQKLEEANKDGKIVIANFSAWWCGPCKVVAPFYSELSEKYPSLMFLVV 123
           G V    T E W ++L++AN+   +V+ +F+A WCGPC+ +APF+++L++K P+++FL V
Sbjct: 6   GQVIACHTVETWNEQLQKANESKTLVVVDFTASWCGPCRFIAPFFADLAKKLPNVLFLKV 65

Query: 124 DVDELTDFSTTWDIKATPTFFFLKEGQQIDKLVGANKPELE 165
           D DEL   ++ W I+A PTF FLKEG+ +DK+VGA K EL+
Sbjct: 66  DTDELKSVASDWAIQAMPTFMFLKEGKILDKVVGAKKDELQ 106

The following BLAST results are available for this feature:

BLAST of CmaCh03G002870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P85801	5.6e-55	70.80	Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1	[more]
Q9C9Y6	5.2e-53	72.59	Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1	[more]
Q9AS75	3.3e-47	66.17	Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 S...	[more]
Q0DKF1	6.2e-46	63.64	Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 S...	[more]
Q9LXZ8	1.4e-29	44.96	Putative thioredoxin H10 OS=Arabidopsis thaliana OX=3702 GN=At3g56420 PE=3 SV=2	[more]

BLAST of CmaCh03G002870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IPQ7	1.5e-74	100.00	thioredoxin H-type-like OS=Cucurbita maxima OX=3661 GN=LOC111478337 PE=4 SV=1	[more]
A0A6J1GEY7	1.1e-72	98.56	thioredoxin H-type-like OS=Cucurbita moschata OX=3662 GN=LOC111453320 PE=4 SV=1	[more]
A0A5A7SL29	2.0e-63	86.33	Thioredoxin H-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G0...	[more]
A0A0A0L068	2.0e-63	86.33	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G334700...	[more]
A0A1S3CKE7	2.0e-63	86.33	thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103501473 PE=4 SV=1	[more]

BLAST of CmaCh03G002870 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6603527.1	1.8e-82	96.84	Ubiquitin-conjugating enzyme E2 28, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_022978310.1	3.0e-74	100.00	thioredoxin H-type-like [Cucurbita maxima] >XP_022978312.1 thioredoxin H-type-li...	[more]
XP_022950143.1	2.2e-72	98.56	thioredoxin H-type-like [Cucurbita moschata] >XP_022950144.1 thioredoxin H-type-...	[more]
KAG7033711.1	6.3e-72	98.55	hypothetical protein SDJN02_03436, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6595640.1	9.4e-68	78.21	hypothetical protein SDJN03_12193, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmaCh03G002870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08710.1	3.7e-54	72.59	thioredoxin H-type 9	[more]
AT3G08710.2	3.7e-54	72.59	thioredoxin H-type 9	[more]
AT3G56420.1	9.8e-31	44.96	Thioredoxin superfamily protein	[more]
AT2G40790.1	5.4e-29	42.75	C-terminal cysteine residue is changed to a serine 2	[more]
AT3G51030.1	5.6e-26	47.52	thioredoxin H-type 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 65..85
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 97..106 score: 64.83 coord: 136..147 score: 31.39 coord: 89..97 score: 42.1
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 41..178 e-value: 3.8E-43 score: 148.4
None	No IPR available	PANTHER	PTHR10438:SF438	THIOREDOXIN	coord: 41..177
None	No IPR available	PANTHER	PTHR10438	THIOREDOXIN	coord: 41..177
None	No IPR available	CDD	cd02947	TRX_family	coord: 79..162 e-value: 9.70411E-29 score: 100.325
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 69..162 e-value: 2.0E-22 score: 79.1
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 48..172 score: 11.383299
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 90..108
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 58..167

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G002870.1	CmaCh03G002870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007154	cell communication
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0009536	plastid
molecular_function	GO:0016491	oxidoreductase activity