CmaCh03G001960 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G001960
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Beta-galactosidase
Location	Cma_Chr03: 3014075 .. 3014586 (-)
RNA-Seq Expression	CmaCh03G001960
Synteny	CmaCh03G001960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAAATCTAGGATGGTACAAAGCTAGCTTTAAGACTCCTTTGGGAACTAACCCAGTAGCATTCGACATGCAAGGGATGGGAAAAGGTCAGGCTTGGGTAAATGGGCAAAGTGACAATTTTGGCCTTCTTTCATTACTAGAAATGATGATTGCAGTTCGACCTGTGACTATAGAGGTGCATATGACCCTAGTAATTGTGTTAAAAATTGTGGGAATCCCTCTCAAAGATGGTATCACGTTCTAAGATCGTTTCTGTCAGATGACACTAACACATTGATTTTATTTGAAGAAATTGGTGGAAGAACTCAACCAGTCGCAATTCAAACCATCACTATAGGAACTATGTGTGGAAATGGTAATGAATGAAGCATCTTAGAATTGTTTGGGAGAGAGGACGTATCATTTCTGAAATCCAATATGCTAACTATGAAAATCCCATTTAAGCAAGGTTCATGGGATGTGACAAATAACACTATTTTGGTGGAAAAGTGCTCGACTTTGCTCAAATGA

mRNA sequence

ATGAAAAATCTAGGATGGTACAAAGCTAGCTTTAAGACTCCTTTGGGAACTAACCCAGTAGCATTCGACATGCAAGGGATGGGAAAAGGTCAGGCTTGGGTAAATGGGCAAAGTGACAATTTTGGCCTTCTTTCATTACTAGAAATGATGATTGCAGTTCGACCTGTGACTATAGAGGTGCATATGACCCTAGTAATTGTGTTAAAAATTGTGGGAATCCCTCTCAAAGATGATGACACTAACACATTGATTTTATTTGAAGAAATTGGTGGAAGAACTCAACCAGTCGCAATTCAAACCATCACTATAGGAACTATGTGTGGAAATGAATTGTTTGGGAGAGAGGACGTATCATTTCTGAAATCCAATATGCTAACTATGAAAATCCCATTTAAGCAAGGTTCATGGGATGTGACAAATAACACTATTTTGGTGGAAAAGTGCTCGACTTTGCTCAAATGA

Coding sequence (CDS)

ATGAAAAATCTAGGATGGTACAAAGCTAGCTTTAAGACTCCTTTGGGAACTAACCCAGTAGCATTCGACATGCAAGGGATGGGAAAAGGTCAGGCTTGGGTAAATGGGCAAAGTGACAATTTTGGCCTTCTTTCATTACTAGAAATGATGATTGCAGTTCGACCTGTGACTATAGAGGTGCATATGACCCTAGTAATTGTGTTAAAAATTGTGGGAATCCCTCTCAAAGATGATGACACTAACACATTGATTTTATTTGAAGAAATTGGTGGAAGAACTCAACCAGTCGCAATTCAAACCATCACTATAGGAACTATGTGTGGAAATGAATTGTTTGGGAGAGAGGACGTATCATTTCTGAAATCCAATATGCTAACTATGAAAATCCCATTTAAGCAAGGTTCATGGGATGTGACAAATAACACTATTTTGGTGGAAAAGTGCTCGACTTTGCTCAAATGA

Protein sequence

MKNLGWYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQSDNFGLLSLLEMMIAVRPVTIEVHMTLVIVLKIVGIPLKDDDTNTLILFEEIGGRTQPVAIQTITIGTMCGNELFGREDVSFLKSNMLTMKIPFKQGSWDVTNNTILVEKCSTLLK

Homology

[Close]

BLAST of CmaCh03G001960 vs. ExPASy Swiss-Prot
Match: Q9SCV5 (Beta-galactosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BGAL7 PE=2 SV=2)

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09
Identity = 41/124 (33.06%), Postives = 55/124 (44.35%), Query Frame = 0


Query: 4   LGWYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQS-------------------DNFGLL 63
           L WYKA FK PLG  PV  D+ G+GKG+AW+NGQS                   D  G  
Sbjct: 622 LTWYKAKFKAPLGKEPVIVDLNGLGKGEAWINGQSIGRYWPSFNSSDDGCKDECDYRGAY 681

Query: 64  SLLE-MMIAVRPVTIEVHMTLVIVLKIVGIPLKDDDTNTLILFEEIGGRTQPVAIQTITI 108
              +   +  +P     H+            L     NT+ LFEE+GG    V  +T+ +
Sbjct: 682 GSDKCAFMCGKPTQRWYHVPRSF--------LNASGHNTITLFEEMGGNPSMVNFKTVVV 737

[Close]

BLAST of CmaCh03G001960 vs. ExPASy Swiss-Prot
Match: P49676 (Beta-galactosidase OS=Brassica oleracea OX=3712 PE=2 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 5.2e-09
Identity = 39/124 (31.45%), Postives = 55/124 (44.35%), Query Frame = 0


Query: 4   LGWYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQ----------SDNFGLLSLLE----- 63
           L WYKA+FK PLG +PV  D+ G+GKG+ W+NGQ          S + G     +     
Sbjct: 624 LSWYKANFKAPLGKDPVIVDLNGLGKGEVWINGQSIGRYWPSFNSSDEGCTEECDYRGEY 683

Query: 64  -----MMIAVRPVTIEVHMTLVIVLKIVGIPLKDDDTNTLILFEEIGGRTQPVAIQTITI 108
                  +  +P     H+            L D   NT+ LFEE+GG    V  +T+  
Sbjct: 684 GSDKCAFMCGKPTQRWYHVPRSF--------LNDKGHNTITLFEEMGGDPSMVKFKTVVT 739

[Close]

BLAST of CmaCh03G001960 vs. ExPASy Swiss-Prot
Match: Q9C6W4 (Beta-galactosidase 15 OS=Arabidopsis thaliana OX=3702 GN=BGAL15 PE=2 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08
Identity = 36/101 (35.64%), Postives = 53/101 (52.48%), Query Frame = 0


Query: 9   ASFKTPLGTNPVAFDMQGMGKGQAWVNGQSDNFGLLSLLEMMIAVRPVTIEVHMTLVIVL 68
           +++  PLG+ PV  D+ G+GKG AW+NG  +N G       +  +   + E H+      
Sbjct: 604 STWSAPLGSEPVVVDLLGLGKGTAWING--NNIGRY-WPAFLSDIDGCSAEYHVPRSF-- 663

Query: 69  KIVGIPLKDDDTNTLILFEEIGGRTQPVAIQTITIGTMCGN 110
                 L  +  NTL+LFEEIGG    V  QTI +G++C N
Sbjct: 664 ------LNSEGDNTLVLFEEIGGNPSLVNFQTIGVGSVCAN 693

[Close]

BLAST of CmaCh03G001960 vs. ExPASy Swiss-Prot
Match: Q8GX69 (Beta-galactosidase 16 OS=Arabidopsis thaliana OX=3702 GN=BGAL16 PE=2 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 2.6e-08
Identity = 39/106 (36.79%), Postives = 53/106 (50.00%), Query Frame = 0


Query: 4   LGWYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQSDNFGLLSLLEMMIAVRPVTIEVHMT 63
           L WYKASF TP G +PVA ++  MGKG+AWVNGQS   G   +        P  I  H+ 
Sbjct: 608 LTWYKASFDTPEGEDPVALNLGSMGKGEAWVNGQS--IGRYWVSFHTYKGNPSQIWYHIP 667

Query: 64  LVIVLKIVGIPLKDDDTNTLILFEEIGGRTQPVAIQTITIGTMCGN 110
                      LK +    +IL EE  G    + I T+++  +CG+
Sbjct: 668 RSF--------LKPNSNLLVILEEEREGNPLGITIDTVSVTEVCGH 703

[Close]

BLAST of CmaCh03G001960 vs. ExPASy Swiss-Prot
Match: Q9SCV3 (Beta-galactosidase 9 OS=Arabidopsis thaliana OX=3702 GN=BGAL9 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.3e-08
Identity = 38/122 (31.15%), Postives = 53/122 (43.44%), Query Frame = 0


Query: 6   WYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQ---------SDNFGLLSLLEMMIAV--- 65
           WYK  F  P GT+PV  +++ MG+GQAWVNGQ         S   G     +   A    
Sbjct: 653 WYKTYFDPPAGTDPVVLNLESMGRGQAWVNGQHIGRYWNIISQKDGCDRTCDYRGAYNSD 712

Query: 66  -------RPVTIEVHMTLVIVLKIVGIPLKDDDTNTLILFEEIGGRTQPVAIQTITIGTM 109
                  +P     H         V        +N L+LFEE GG    ++++T+T G +
Sbjct: 713 KCTTNCGKPTQTRYH---------VPRSWLKPSSNLLVLFEETGGNPFKISVKTVTAGIL 765

[Close]

BLAST of CmaCh03G001960 vs. ExPASy TrEMBL
Match: A0A5D3CJ19 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003860 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 5.5e-22
Identity = 77/171 (45.03%), Postives = 89/171 (52.05%), Query Frame = 0


Query: 2   KNLGWYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQS----------DNFGLLSLLEMMI 61
           + + WYK SFKTP GT+PV  DMQGMGKGQAWVNGQS           N    +  +   
Sbjct: 572 RRMTWYKTSFKTPPGTDPVTLDMQGMGKGQAWVNGQSIGRFWPSFIAGNDSCSTTCDYRG 631

Query: 62  AVRPVTIEVHMTLVIVLKIVGIP--LKDDDTNTLILFEEIGGRTQPVAIQTITIGTMCGN 121
           A  P    V        +   IP     DDTNTLILFEEIGG  Q V++QTITIGT+CGN
Sbjct: 632 AYNPSKC-VENCGNPSQRWYHIPRSFLSDDTNTLILFEEIGGNPQQVSVQTITIGTICGN 691

Query: 122 ELFGR------------EDVSFLKSNMLTMKI-PFKQGSWDVTNNTILVEK 148
              G              ++ F        K   FKQGSWDV N+ ILVEK
Sbjct: 692 ANEGSTLELSCQGGHIISEIQFASYGNPEGKCGSFKQGSWDVINSAILVEK 741

[Close]

BLAST of CmaCh03G001960 vs. ExPASy TrEMBL
Match: A0A1S3BQ87 (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103492519 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 5.5e-22
Identity = 77/171 (45.03%), Postives = 89/171 (52.05%), Query Frame = 0


Query: 2   KNLGWYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQS----------DNFGLLSLLEMMI 61
           + + WYK SFKTP GT+PV  DMQGMGKGQAWVNGQS           N    +  +   
Sbjct: 733 RRMTWYKTSFKTPPGTDPVTLDMQGMGKGQAWVNGQSIGRFWPSFIAGNDSCSTTCDYRG 792

Query: 62  AVRPVTIEVHMTLVIVLKIVGIP--LKDDDTNTLILFEEIGGRTQPVAIQTITIGTMCGN 121
           A  P    V        +   IP     DDTNTLILFEEIGG  Q V++QTITIGT+CGN
Sbjct: 793 AYNPSKC-VENCGNPSQRWYHIPRSFLSDDTNTLILFEEIGGNPQQVSVQTITIGTICGN 852

Query: 122 ELFGR------------EDVSFLKSNMLTMKI-PFKQGSWDVTNNTILVEK 148
              G              ++ F        K   FKQGSWDV N+ ILVEK
Sbjct: 853 ANEGSTLELSCQGGHIISEIQFASYGNPEGKCGSFKQGSWDVINSAILVEK 902

[Close]

BLAST of CmaCh03G001960 vs. ExPASy TrEMBL
Match: A0A5A7U918 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold761G00120 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 7.2e-22
Identity = 76/171 (44.44%), Postives = 89/171 (52.05%), Query Frame = 0


Query: 2   KNLGWYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQS----------DNFGLLSLLEMMI 61
           + + WYK SFKTP GT+PV  DMQGMGKGQAWVNGQS           N    +  +   
Sbjct: 572 RRMTWYKTSFKTPPGTDPVTLDMQGMGKGQAWVNGQSIGRFWPSFIAGNDSCSTTCDYRG 631

Query: 62  AVRPVTIEVHMTLVIVLKIVGIP--LKDDDTNTLILFEEIGGRTQPVAIQTITIGTMCGN 121
           A  P    V        +   IP     DDTNTL+LFEEIGG  Q V++QTITIGT+CGN
Sbjct: 632 AYNPSKC-VENCGNPSQRWYHIPRSFLSDDTNTLVLFEEIGGNPQQVSVQTITIGTICGN 691

Query: 122 ELFGR------------EDVSFLKSNMLTMKI-PFKQGSWDVTNNTILVEK 148
              G              ++ F        K   FKQGSWDV N+ ILVEK
Sbjct: 692 ANEGSTLELSCQGGHIISEIQFASYGNPEGKCGSFKQGSWDVINSAILVEK 741

[Close]

BLAST of CmaCh03G001960 vs. ExPASy TrEMBL
Match: A0A5A7UNA7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001360 PE=3 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 3.6e-21
Identity = 74/182 (40.66%), Postives = 88/182 (48.35%), Query Frame = 0


Query: 2   KNLGWYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQS----------DNFGLLSLLEMMI 61
           + + WYK SFKTP G +PV  DMQGMGKGQAWVNGQS           N    +  +   
Sbjct: 614 RRMTWYKTSFKTPAGIDPVVLDMQGMGKGQAWVNGQSIGRFWPSFIAGNDSCSATCDYRG 673

Query: 62  AVRPVTIEVHMTLVIVLKIVG-----------IP--LKDDDTNTLILFEEIGGRTQPVAI 121
           A  P             K VG           +P      DTNTLILFEEIGG  Q V++
Sbjct: 674 AYNP------------SKCVGNCGNPSQRWYHVPRSFLSSDTNTLILFEEIGGNPQQVSV 733

Query: 122 QTITIGTMCGNELFGR------------EDVSFLKSNMLTMKI-PFKQGSWDVTNNTILV 148
           QTITIGT+CGN   G              ++ F        K   FK+GSWDVTN+ + V
Sbjct: 734 QTITIGTICGNANEGSTLELSCQGGHVISEIQFASYGNPEGKCGSFKEGSWDVTNSALFV 783

[Close]

BLAST of CmaCh03G001960 vs. ExPASy TrEMBL
Match: A0A1S3C8Z9 (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103498345 PE=3 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 6.1e-21
Identity = 71/171 (41.52%), Postives = 89/171 (52.05%), Query Frame = 0


Query: 2   KNLGWYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQ----------SDNFGLLSLLEMMI 61
           + + WYK +FKTP GTNPVA DMQGMGKGQAWVNG           S N    +  +   
Sbjct: 617 RRMTWYKTNFKTPSGTNPVALDMQGMGKGQAWVNGVSIGRFWPSFISGNDSCSANCDYRG 676

Query: 62  AVRPVTIEVHMTLVIVLKIVGIP--LKDDDTNTLILFEEIGGRTQPVAIQTITIGTMCGN 121
              P     +       +   +P     +DTNTLILFEEIGG  Q V+IQTI +GT+CGN
Sbjct: 677 GYNPKKCADNCGNP-SQRWYHVPRSFLSNDTNTLILFEEIGGNPQQVSIQTIALGTICGN 736

Query: 122 ELFGREDVSFLKSNMLTMKI-------------PFKQGSWDVTNNTILVEK 148
              G       +   +  +I              FK+GSWDVTN+T+LVEK
Sbjct: 737 AYEGSTLELSCQEGRIISEIQFASYGNPDGKCGSFKKGSWDVTNSTVLVEK 786

[Close]

BLAST of CmaCh03G001960 vs. NCBI nr
Match: XP_008451143.1 (PREDICTED: beta-galactosidase 15-like [Cucumis melo])

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-21
Identity = 77/171 (45.03%), Postives = 89/171 (52.05%), Query Frame = 0


Query: 2   KNLGWYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQS----------DNFGLLSLLEMMI 61
           + + WYK SFKTP GT+PV  DMQGMGKGQAWVNGQS           N    +  +   
Sbjct: 733 RRMTWYKTSFKTPPGTDPVTLDMQGMGKGQAWVNGQSIGRFWPSFIAGNDSCSTTCDYRG 792

Query: 62  AVRPVTIEVHMTLVIVLKIVGIP--LKDDDTNTLILFEEIGGRTQPVAIQTITIGTMCGN 121
           A  P    V        +   IP     DDTNTLILFEEIGG  Q V++QTITIGT+CGN
Sbjct: 793 AYNPSKC-VENCGNPSQRWYHIPRSFLSDDTNTLILFEEIGGNPQQVSVQTITIGTICGN 852

Query: 122 ELFGR------------EDVSFLKSNMLTMKI-PFKQGSWDVTNNTILVEK 148
              G              ++ F        K   FKQGSWDV N+ ILVEK
Sbjct: 853 ANEGSTLELSCQGGHIISEIQFASYGNPEGKCGSFKQGSWDVINSAILVEK 902

[Close]

BLAST of CmaCh03G001960 vs. NCBI nr
Match: TYK10239.1 (beta-galactosidase 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 114.0 bits (284), Expect = 1.1e-21
Identity = 77/171 (45.03%), Postives = 89/171 (52.05%), Query Frame = 0


Query: 2   KNLGWYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQS----------DNFGLLSLLEMMI 61
           + + WYK SFKTP GT+PV  DMQGMGKGQAWVNGQS           N    +  +   
Sbjct: 572 RRMTWYKTSFKTPPGTDPVTLDMQGMGKGQAWVNGQSIGRFWPSFIAGNDSCSTTCDYRG 631

Query: 62  AVRPVTIEVHMTLVIVLKIVGIP--LKDDDTNTLILFEEIGGRTQPVAIQTITIGTMCGN 121
           A  P    V        +   IP     DDTNTLILFEEIGG  Q V++QTITIGT+CGN
Sbjct: 632 AYNPSKC-VENCGNPSQRWYHIPRSFLSDDTNTLILFEEIGGNPQQVSVQTITIGTICGN 691

Query: 122 ELFGR------------EDVSFLKSNMLTMKI-PFKQGSWDVTNNTILVEK 148
              G              ++ F        K   FKQGSWDV N+ ILVEK
Sbjct: 692 ANEGSTLELSCQGGHIISEIQFASYGNPEGKCGSFKQGSWDVINSAILVEK 741

[Close]

BLAST of CmaCh03G001960 vs. NCBI nr
Match: KAA0050887.1 (beta-galactosidase 15-like [Cucumis melo var. makuwa])

HSP 1 Score: 113.6 bits (283), Expect = 1.5e-21
Identity = 76/171 (44.44%), Postives = 89/171 (52.05%), Query Frame = 0


Query: 2   KNLGWYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQS----------DNFGLLSLLEMMI 61
           + + WYK SFKTP GT+PV  DMQGMGKGQAWVNGQS           N    +  +   
Sbjct: 572 RRMTWYKTSFKTPPGTDPVTLDMQGMGKGQAWVNGQSIGRFWPSFIAGNDSCSTTCDYRG 631

Query: 62  AVRPVTIEVHMTLVIVLKIVGIP--LKDDDTNTLILFEEIGGRTQPVAIQTITIGTMCGN 121
           A  P    V        +   IP     DDTNTL+LFEEIGG  Q V++QTITIGT+CGN
Sbjct: 632 AYNPSKC-VENCGNPSQRWYHIPRSFLSDDTNTLVLFEEIGGNPQQVSVQTITIGTICGN 691

Query: 122 ELFGR------------EDVSFLKSNMLTMKI-PFKQGSWDVTNNTILVEK 148
              G              ++ F        K   FKQGSWDV N+ ILVEK
Sbjct: 692 ANEGSTLELSCQGGHIISEIQFASYGNPEGKCGSFKQGSWDVINSAILVEK 741

[Close]

BLAST of CmaCh03G001960 vs. NCBI nr
Match: XP_031741738.1 (beta-galactosidase 7-like [Cucumis sativus])

HSP 1 Score: 111.7 bits (278), Expect = 5.7e-21
Identity = 75/182 (41.21%), Postives = 88/182 (48.35%), Query Frame = 0


Query: 2   KNLGWYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQS----------DNFGLLSLLEMMI 61
           + + WYK SFKTP G +PV  DMQGMGKGQAWVNGQS           N    +  +   
Sbjct: 614 RRMTWYKTSFKTPAGIDPVVLDMQGMGKGQAWVNGQSIGRFWPSFVAGNDSCSATCDYRG 673

Query: 62  AVRPVTIEVHMTLVIVLKIVG-----------IP--LKDDDTNTLILFEEIGGRTQPVAI 121
           A  P             K VG           +P      +TNTLILFEEIGG  Q V++
Sbjct: 674 AYNP------------SKCVGNCGNPSQRWYHVPRSFLSSNTNTLILFEEIGGNPQHVSV 733

Query: 122 QTITIGTMCGNELFGR------------EDVSFLKSNMLTMKI-PFKQGSWDVTNNTILV 148
           QTITIGT+CGN   G              D+ F        K   FKQGSWDVTN+ + V
Sbjct: 734 QTITIGTICGNANEGSTLDLSCQGGHVISDIQFASYGNPEGKCGSFKQGSWDVTNSALFV 783

[Close]

BLAST of CmaCh03G001960 vs. NCBI nr
Match: KAA0055125.1 (beta-galactosidase 7-like [Cucumis melo var. makuwa] >TYK20734.1 beta-galactosidase 7-like [Cucumis melo var. makuwa])

HSP 1 Score: 111.3 bits (277), Expect = 7.4e-21
Identity = 74/182 (40.66%), Postives = 88/182 (48.35%), Query Frame = 0


Query: 2   KNLGWYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQS----------DNFGLLSLLEMMI 61
           + + WYK SFKTP G +PV  DMQGMGKGQAWVNGQS           N    +  +   
Sbjct: 614 RRMTWYKTSFKTPAGIDPVVLDMQGMGKGQAWVNGQSIGRFWPSFIAGNDSCSATCDYRG 673

Query: 62  AVRPVTIEVHMTLVIVLKIVG-----------IP--LKDDDTNTLILFEEIGGRTQPVAI 121
           A  P             K VG           +P      DTNTLILFEEIGG  Q V++
Sbjct: 674 AYNP------------SKCVGNCGNPSQRWYHVPRSFLSSDTNTLILFEEIGGNPQQVSV 733

Query: 122 QTITIGTMCGNELFGR------------EDVSFLKSNMLTMKI-PFKQGSWDVTNNTILV 148
           QTITIGT+CGN   G              ++ F        K   FK+GSWDVTN+ + V
Sbjct: 734 QTITIGTICGNANEGSTLELSCQGGHVISEIQFASYGNPEGKCGSFKEGSWDVTNSALFV 783

[Close]

BLAST of CmaCh03G001960 vs. TAIR 10
Match: AT5G20710.1 (beta-galactosidase 7 )

HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10
Identity = 41/124 (33.06%), Postives = 55/124 (44.35%), Query Frame = 0


Query: 4   LGWYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQS-------------------DNFGLL 63
           L WYKA FK PLG  PV  D+ G+GKG+AW+NGQS                   D  G  
Sbjct: 622 LTWYKAKFKAPLGKEPVIVDLNGLGKGEAWINGQSIGRYWPSFNSSDDGCKDECDYRGAY 681

Query: 64  SLLE-MMIAVRPVTIEVHMTLVIVLKIVGIPLKDDDTNTLILFEEIGGRTQPVAIQTITI 108
              +   +  +P     H+            L     NT+ LFEE+GG    V  +T+ +
Sbjct: 682 GSDKCAFMCGKPTQRWYHVPRSF--------LNASGHNTITLFEEMGGNPSMVNFKTVVV 737

[Close]

BLAST of CmaCh03G001960 vs. TAIR 10
Match: AT1G77410.1 (beta-galactosidase 16 )

HSP 1 Score: 60.1 bits (144), Expect = 1.8e-09
Identity = 39/106 (36.79%), Postives = 53/106 (50.00%), Query Frame = 0


Query: 4   LGWYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQSDNFGLLSLLEMMIAVRPVTIEVHMT 63
           L WYKASF TP G +PVA ++  MGKG+AWVNGQS   G   +        P  I  H+ 
Sbjct: 608 LTWYKASFDTPEGEDPVALNLGSMGKGEAWVNGQS--IGRYWVSFHTYKGNPSQIWYHIP 667

Query: 64  LVIVLKIVGIPLKDDDTNTLILFEEIGGRTQPVAIQTITIGTMCGN 110
                      LK +    +IL EE  G    + I T+++  +CG+
Sbjct: 668 RSF--------LKPNSNLLVILEEEREGNPLGITIDTVSVTEVCGH 703

[Close]

BLAST of CmaCh03G001960 vs. TAIR 10
Match: AT2G32810.1 (beta galactosidase 9 )

HSP 1 Score: 59.7 bits (143), Expect = 2.4e-09
Identity = 38/122 (31.15%), Postives = 53/122 (43.44%), Query Frame = 0


Query: 6   WYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQ---------SDNFGLLSLLEMMIAV--- 65
           WYK  F  P GT+PV  +++ MG+GQAWVNGQ         S   G     +   A    
Sbjct: 653 WYKTYFDPPAGTDPVVLNLESMGRGQAWVNGQHIGRYWNIISQKDGCDRTCDYRGAYNSD 712

Query: 66  -------RPVTIEVHMTLVIVLKIVGIPLKDDDTNTLILFEEIGGRTQPVAIQTITIGTM 109
                  +P     H         V        +N L+LFEE GG    ++++T+T G +
Sbjct: 713 KCTTNCGKPTQTRYH---------VPRSWLKPSSNLLVLFEETGGNPFKISVKTVTAGIL 765

[Close]

BLAST of CmaCh03G001960 vs. TAIR 10
Match: AT2G32810.2 (beta galactosidase 9 )

HSP 1 Score: 59.7 bits (143), Expect = 2.4e-09
Identity = 38/122 (31.15%), Postives = 53/122 (43.44%), Query Frame = 0


Query: 6   WYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQ---------SDNFGLLSLLEMMIAV--- 65
           WYK  F  P GT+PV  +++ MG+GQAWVNGQ         S   G     +   A    
Sbjct: 653 WYKTYFDPPAGTDPVVLNLESMGRGQAWVNGQHIGRYWNIISQKDGCDRTCDYRGAYNSD 712

Query: 66  -------RPVTIEVHMTLVIVLKIVGIPLKDDDTNTLILFEEIGGRTQPVAIQTITIGTM 109
                  +P     H         V        +N L+LFEE GG    ++++T+T G +
Sbjct: 713 KCTTNCGKPTQTRYH---------VPRSWLKPSSNLLVLFEETGGNPFKISVKTVTAGIL 765

[Close]

BLAST of CmaCh03G001960 vs. TAIR 10
Match: AT1G31740.1 (beta-galactosidase 15 )

HSP 1 Score: 58.5 bits (140), Expect = 5.3e-09
Identity = 36/102 (35.29%), Postives = 49/102 (48.04%), Query Frame = 0


Query: 9   ASFKTPLGTNPVAFDMQGMGKGQAWVNGQSDNFGLLSLLEMMIAVRPVTIEVHMTLVIVL 68
           +++  PLG+ PV  D+ G+GKG AW+NG  +N G                          
Sbjct: 627 STWSAPLGSEPVVVDLLGLGKGTAWING--NNIG-------------------------- 686

Query: 69  KIVGIPLKD-DDTNTLILFEEIGGRTQPVAIQTITIGTMCGN 110
           +     L D D  NTL+LFEEIGG    V  QTI +G++C N
Sbjct: 687 RYWPAFLSDIDGDNTLVLFEEIGGNPSLVNFQTIGVGSVCAN 700

The following BLAST results are available for this feature:

BLAST of CmaCh03G001960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCV5	1.8e-09	33.06	Beta-galactosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BGAL7 PE=2 SV=2	[more]
P49676	5.2e-09	31.45	Beta-galactosidase OS=Brassica oleracea OX=3712 PE=2 SV=1	[more]
Q9C6W4	1.5e-08	35.64	Beta-galactosidase 15 OS=Arabidopsis thaliana OX=3702 GN=BGAL15 PE=2 SV=1	[more]
Q8GX69	2.6e-08	36.79	Beta-galactosidase 16 OS=Arabidopsis thaliana OX=3702 GN=BGAL16 PE=2 SV=2	[more]
Q9SCV3	3.3e-08	31.15	Beta-galactosidase 9 OS=Arabidopsis thaliana OX=3702 GN=BGAL9 PE=2 SV=1	[more]

BLAST of CmaCh03G001960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CJ19	5.5e-22	45.03	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00...	[more]
A0A1S3BQ87	5.5e-22	45.03	Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103492519 PE=3 SV=1	[more]
A0A5A7U918	7.2e-22	44.44	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold761G0...	[more]
A0A5A7UNA7	3.6e-21	40.66	Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G0...	[more]
A0A1S3C8Z9	6.1e-21	41.52	Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103498345 PE=3 SV=1	[more]

BLAST of CmaCh03G001960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451143.1	1.1e-21	45.03	PREDICTED: beta-galactosidase 15-like [Cucumis melo]	[more]
TYK10239.1	1.1e-21	45.03	beta-galactosidase 15-like [Cucumis melo var. makuwa]	[more]
KAA0050887.1	1.5e-21	44.44	beta-galactosidase 15-like [Cucumis melo var. makuwa]	[more]
XP_031741738.1	5.7e-21	41.21	beta-galactosidase 7-like [Cucumis sativus]	[more]
KAA0055125.1	7.4e-21	40.66	beta-galactosidase 7-like [Cucumis melo var. makuwa] >TYK20734.1 beta-galactosid...	[more]

BLAST of CmaCh03G001960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20710.1	1.3e-10	33.06	beta-galactosidase 7	[more]
AT1G77410.1	1.8e-09	36.79	beta-galactosidase 16	[more]
AT2G32810.1	2.4e-09	31.15	beta galactosidase 9	[more]
AT2G32810.2	2.4e-09	31.15	beta galactosidase 9	[more]
AT1G31740.1	5.3e-09	35.29	beta-galactosidase 15	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23421:SF88	BETA-GALACTOSIDASE 14	coord: 3..110
IPR001944	Glycoside hydrolase, family 35	PANTHER	PTHR23421	BETA-GALACTOSIDASE RELATED	coord: 3..110
IPR008979	Galactose-binding-like domain superfamily	SUPERFAMILY	49785	Galactose-binding domain-like	coord: 3..38

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G001960.1	CmaCh03G001960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
cellular_component	GO:0110165	cellular anatomical entity
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds