CmaCh03G001960 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAAATCTAGGATGGTACAAAGCTAGCTTTAAGACTCCTTTGGGAACTAACCCAGTAGCATTCGACATGCAAGGGATGGGAAAAGGTCAGGCTTGGGTAAATGGGCAAAGTGACAATTTTGGCCTTCTTTCATTACTAGAAATGATGATTGCAGTTCGACCTGTGACTATAGAGGTGCATATGACCCTAGTAATTGTGTTAAAAATTGTGGGAATCCCTCTCAAAGATGGTATCACGTTCTAAGATCGTTTCTGTCAGATGACACTAACACATTGATTTTATTTGAAGAAATTGGTGGAAGAACTCAACCAGTCGCAATTCAAACCATCACTATAGGAACTATGTGTGGAAATGGTAATGAATGAAGCATCTTAGAATTGTTTGGGAGAGAGGACGTATCATTTCTGAAATCCAATATGCTAACTATGAAAATCCCATTTAAGCAAGGTTCATGGGATGTGACAAATAACACTATTTTGGTGGAAAAGTGCTCGACTTTGCTCAAATGA ATGAAAAATCTAGGATGGTACAAAGCTAGCTTTAAGACTCCTTTGGGAACTAACCCAGTAGCATTCGACATGCAAGGGATGGGAAAAGGTCAGGCTTGGGTAAATGGGCAAAGTGACAATTTTGGCCTTCTTTCATTACTAGAAATGATGATTGCAGTTCGACCTGTGACTATAGAGGTGCATATGACCCTAGTAATTGTGTTAAAAATTGTGGGAATCCCTCTCAAAGATGATGACACTAACACATTGATTTTATTTGAAGAAATTGGTGGAAGAACTCAACCAGTCGCAATTCAAACCATCACTATAGGAACTATGTGTGGAAATGAATTGTTTGGGAGAGAGGACGTATCATTTCTGAAATCCAATATGCTAACTATGAAAATCCCATTTAAGCAAGGTTCATGGGATGTGACAAATAACACTATTTTGGTGGAAAAGTGCTCGACTTTGCTCAAATGA ATGAAAAATCTAGGATGGTACAAAGCTAGCTTTAAGACTCCTTTGGGAACTAACCCAGTAGCATTCGACATGCAAGGGATGGGAAAAGGTCAGGCTTGGGTAAATGGGCAAAGTGACAATTTTGGCCTTCTTTCATTACTAGAAATGATGATTGCAGTTCGACCTGTGACTATAGAGGTGCATATGACCCTAGTAATTGTGTTAAAAATTGTGGGAATCCCTCTCAAAGATGATGACACTAACACATTGATTTTATTTGAAGAAATTGGTGGAAGAACTCAACCAGTCGCAATTCAAACCATCACTATAGGAACTATGTGTGGAAATGAATTGTTTGGGAGAGAGGACGTATCATTTCTGAAATCCAATATGCTAACTATGAAAATCCCATTTAAGCAAGGTTCATGGGATGTGACAAATAACACTATTTTGGTGGAAAAGTGCTCGACTTTGCTCAAATGA MKNLGWYKASFKTPLGTNPVAFDMQGMGKGQAWVNGQSDNFGLLSLLEMMIAVRPVTIEVHMTLVIVLKIVGIPLKDDDTNTLILFEEIGGRTQPVAIQTITIGTMCGNELFGREDVSFLKSNMLTMKIPFKQGSWDVTNNTILVEKCSTLLK Homology
BLAST of CmaCh03G001960 vs. ExPASy Swiss-Prot
Match: Q9SCV5 (Beta-galactosidase 7 OS=Arabidopsis thaliana OX=3702 GN=BGAL7 PE=2 SV=2) HSP 1 Score: 63.9 bits (154), Expect = 1.8e-09 Identity = 41/124 (33.06%), Postives = 55/124 (44.35%), Query Frame = 0
BLAST of CmaCh03G001960 vs. ExPASy Swiss-Prot
Match: P49676 (Beta-galactosidase OS=Brassica oleracea OX=3712 PE=2 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 5.2e-09 Identity = 39/124 (31.45%), Postives = 55/124 (44.35%), Query Frame = 0
BLAST of CmaCh03G001960 vs. ExPASy Swiss-Prot
Match: Q9C6W4 (Beta-galactosidase 15 OS=Arabidopsis thaliana OX=3702 GN=BGAL15 PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08 Identity = 36/101 (35.64%), Postives = 53/101 (52.48%), Query Frame = 0
BLAST of CmaCh03G001960 vs. ExPASy Swiss-Prot
Match: Q8GX69 (Beta-galactosidase 16 OS=Arabidopsis thaliana OX=3702 GN=BGAL16 PE=2 SV=2) HSP 1 Score: 60.1 bits (144), Expect = 2.6e-08 Identity = 39/106 (36.79%), Postives = 53/106 (50.00%), Query Frame = 0
BLAST of CmaCh03G001960 vs. ExPASy Swiss-Prot
Match: Q9SCV3 (Beta-galactosidase 9 OS=Arabidopsis thaliana OX=3702 GN=BGAL9 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 3.3e-08 Identity = 38/122 (31.15%), Postives = 53/122 (43.44%), Query Frame = 0
BLAST of CmaCh03G001960 vs. ExPASy TrEMBL
Match: A0A5D3CJ19 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G003860 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 5.5e-22 Identity = 77/171 (45.03%), Postives = 89/171 (52.05%), Query Frame = 0
BLAST of CmaCh03G001960 vs. ExPASy TrEMBL
Match: A0A1S3BQ87 (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103492519 PE=3 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 5.5e-22 Identity = 77/171 (45.03%), Postives = 89/171 (52.05%), Query Frame = 0
BLAST of CmaCh03G001960 vs. ExPASy TrEMBL
Match: A0A5A7U918 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold761G00120 PE=3 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 7.2e-22 Identity = 76/171 (44.44%), Postives = 89/171 (52.05%), Query Frame = 0
BLAST of CmaCh03G001960 vs. ExPASy TrEMBL
Match: A0A5A7UNA7 (Beta-galactosidase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold480G001360 PE=3 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 3.6e-21 Identity = 74/182 (40.66%), Postives = 88/182 (48.35%), Query Frame = 0
BLAST of CmaCh03G001960 vs. ExPASy TrEMBL
Match: A0A1S3C8Z9 (Beta-galactosidase OS=Cucumis melo OX=3656 GN=LOC103498345 PE=3 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 6.1e-21 Identity = 71/171 (41.52%), Postives = 89/171 (52.05%), Query Frame = 0
BLAST of CmaCh03G001960 vs. NCBI nr
Match: XP_008451143.1 (PREDICTED: beta-galactosidase 15-like [Cucumis melo]) HSP 1 Score: 114.0 bits (284), Expect = 1.1e-21 Identity = 77/171 (45.03%), Postives = 89/171 (52.05%), Query Frame = 0
BLAST of CmaCh03G001960 vs. NCBI nr
Match: TYK10239.1 (beta-galactosidase 15-like [Cucumis melo var. makuwa]) HSP 1 Score: 114.0 bits (284), Expect = 1.1e-21 Identity = 77/171 (45.03%), Postives = 89/171 (52.05%), Query Frame = 0
BLAST of CmaCh03G001960 vs. NCBI nr
Match: KAA0050887.1 (beta-galactosidase 15-like [Cucumis melo var. makuwa]) HSP 1 Score: 113.6 bits (283), Expect = 1.5e-21 Identity = 76/171 (44.44%), Postives = 89/171 (52.05%), Query Frame = 0
BLAST of CmaCh03G001960 vs. NCBI nr
Match: XP_031741738.1 (beta-galactosidase 7-like [Cucumis sativus]) HSP 1 Score: 111.7 bits (278), Expect = 5.7e-21 Identity = 75/182 (41.21%), Postives = 88/182 (48.35%), Query Frame = 0
BLAST of CmaCh03G001960 vs. NCBI nr
Match: KAA0055125.1 (beta-galactosidase 7-like [Cucumis melo var. makuwa] >TYK20734.1 beta-galactosidase 7-like [Cucumis melo var. makuwa]) HSP 1 Score: 111.3 bits (277), Expect = 7.4e-21 Identity = 74/182 (40.66%), Postives = 88/182 (48.35%), Query Frame = 0
BLAST of CmaCh03G001960 vs. TAIR 10
Match: AT5G20710.1 (beta-galactosidase 7 ) HSP 1 Score: 63.9 bits (154), Expect = 1.3e-10 Identity = 41/124 (33.06%), Postives = 55/124 (44.35%), Query Frame = 0
BLAST of CmaCh03G001960 vs. TAIR 10
Match: AT1G77410.1 (beta-galactosidase 16 ) HSP 1 Score: 60.1 bits (144), Expect = 1.8e-09 Identity = 39/106 (36.79%), Postives = 53/106 (50.00%), Query Frame = 0
BLAST of CmaCh03G001960 vs. TAIR 10
Match: AT2G32810.1 (beta galactosidase 9 ) HSP 1 Score: 59.7 bits (143), Expect = 2.4e-09 Identity = 38/122 (31.15%), Postives = 53/122 (43.44%), Query Frame = 0
BLAST of CmaCh03G001960 vs. TAIR 10
Match: AT2G32810.2 (beta galactosidase 9 ) HSP 1 Score: 59.7 bits (143), Expect = 2.4e-09 Identity = 38/122 (31.15%), Postives = 53/122 (43.44%), Query Frame = 0
BLAST of CmaCh03G001960 vs. TAIR 10
Match: AT1G31740.1 (beta-galactosidase 15 ) HSP 1 Score: 58.5 bits (140), Expect = 5.3e-09 Identity = 36/102 (35.29%), Postives = 49/102 (48.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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