CmaCh03G001940 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G001940
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	UPF0481 protein At3g47200-like
Location	Cma_Chr03: 2900882 .. 2901332 (+)
RNA-Seq Expression	CmaCh03G001940
Synteny	CmaCh03G001940

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATATGAGCTTCAAAAATGGAGTTTTTGAAATCCCACCTATACTTATTGATTATTACTTTGAAACCATGATGCAAAACTTGATAGCGTTTGAGCATTTTTACGTTGGAAATGACAACAAATGTATCCAATGTGTCATTACTGGAACATTTGAGTTTACTTGTGAAAGTCGGAATCATAGTCAACAAAATTGTAGGTAGTAATATAGAAGTTTTAGAACTGTTTAACAATCTCTATAAATTTGTTACCGTCCCAAATTGTTGCCACTTCAACGATATCAACAAAGCTTTACGAGAACATTGCAATAGACGATGGAACAAGGTGATAGCTACACTCAAACATAACTATTTCAATACGCCATGGGCAATTGTCTCCTTCCATGGTGCAATTTTCCTCCTTAGTTTTGACAATGCTTCAAACTATATTTTTTGGTATATTCACATTTCTTAA

mRNA sequence

ATGAATATGAGCTTCAAAAATGGAGTTTTTGAAATCCCACCTATACTTATTGATTATTACTTTGAAACCATGATGCAAAACTTGATAGCGTTTGAGCATTTTTACGTTGGAAATGACAACAAATGTATCCAATGTGTCATTACTGGAACATTTGAGTTTACTTGTGAAAGTCGGAATCATAGTCAACAAAATTGTAGTAATATAGAAGTTTTAGAACTGTTTAACAATCTCTATAAATTTGTTACCGTCCCAAATTGTTGCCACTTCAACGATATCAACAAAGCTTTACGAGAACATTGCAATAGACGATGGAACAAGGTGATAGCTACACTCAAACATAACTATTTCAATACGCCATGGGCAATTGTCTCCTTCCATGGTGCAATTTTCCTCCTTAGTTTTGACAATGCTTCAAACTATATTTTTTGGTATATTCACATTTCTTAA

Coding sequence (CDS)

ATGAATATGAGCTTCAAAAATGGAGTTTTTGAAATCCCACCTATACTTATTGATTATTACTTTGAAACCATGATGCAAAACTTGATAGCGTTTGAGCATTTTTACGTTGGAAATGACAACAAATGTATCCAATGTGTCATTACTGGAACATTTGAGTTTACTTGTGAAAGTCGGAATCATAGTCAACAAAATTGTAGTAATATAGAAGTTTTAGAACTGTTTAACAATCTCTATAAATTTGTTACCGTCCCAAATTGTTGCCACTTCAACGATATCAACAAAGCTTTACGAGAACATTGCAATAGACGATGGAACAAGGTGATAGCTACACTCAAACATAACTATTTCAATACGCCATGGGCAATTGTCTCCTTCCATGGTGCAATTTTCCTCCTTAGTTTTGACAATGCTTCAAACTATATTTTTTGGTATATTCACATTTCTTAA

Protein sequence

MNMSFKNGVFEIPPILIDYYFETMMQNLIAFEHFYVGNDNKCIQCVITGTFEFTCESRNHSQQNCSNIEVLELFNNLYKFVTVPNCCHFNDINKALREHCNRRWNKVIATLKHNYFNTPWAIVSFHGAIFLLSFDNASNYIFWYIHIS

Homology

[Close]

BLAST of CmaCh03G001940 vs. ExPASy TrEMBL
Match: A0A6J1EY59 (UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111439558 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 3.0e-49
Identity = 101/144 (70.14%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 1   MNMSFKNGVFEIPPILIDYYFETMMQNLIAFEHFYVGNDNKCIQCVITGTFEFTCESRNH 60
           MN+SFKNGVFEIPPILID YFETMM+NLIAFEHFYVGNDNKCIQ  ++      C  ++ 
Sbjct: 276 MNVSFKNGVFEIPPILIDDYFETMMRNLIAFEHFYVGNDNKCIQ-YVSLLDHLICTEKDV 335

Query: 61  S----------QQNCSNIEVLELFNNLYKFVTVPNCCHFNDINKALREHCNRRWNKVIAT 120
           S          +   S+IEV ELFNNL KFVT+PNCCHFNDINKAL+EHC+RRWNK IAT
Sbjct: 336 SVLVKAGIIINEIGGSSIEVSELFNNLCKFVTIPNCCHFNDINKALQEHCSRRWNKAIAT 395

Query: 121 LKHNYFNTPWAIVSFHGAIFLLSF 135
           LKHNYFNTPW +VSF GAIFLL F
Sbjct: 396 LKHNYFNTPWTVVSFVGAIFLLIF 418

[Close]

BLAST of CmaCh03G001940 vs. ExPASy TrEMBL
Match: A0A6J1IHF5 (UPF0481 protein At3g47200-like OS=Cucurbita maxima OX=3661 GN=LOC111473012 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 6.7e-49
Identity = 103/144 (71.53%), Postives = 112/144 (77.78%), Query Frame = 0


Query: 1   MNMSFKNGVFEIPPILIDYYFETMMQNLIAFEHFYVGNDNKCIQCVITGTFEFTCESRNH 60
           MN+SFKNGVFEIPPIL D YFE MM+NLIAFEHFYVGNDNKCIQ  ++      C  ++ 
Sbjct: 189 MNVSFKNGVFEIPPILNDDYFEPMMRNLIAFEHFYVGNDNKCIQ-YVSLLDHLICTEKDV 248

Query: 61  S----------QQNCSNIEVLELFNNLYKFVTVPNCCHFNDINKALREHCNRRWNKVIAT 120
           S          +   S+IEV ELFNNL KFVTVPNCCHFNDINKALREHC+RRWNK IAT
Sbjct: 249 SVLVKAGIVINEIGGSSIEVSELFNNLCKFVTVPNCCHFNDINKALREHCSRRWNKAIAT 308

Query: 121 LKHNYFNTPWAIVSFHGAIFLLSF 135
           LKHNYFNTPWAIVSF GAIFLL F
Sbjct: 309 LKHNYFNTPWAIVSFVGAIFLLIF 331

[Close]

BLAST of CmaCh03G001940 vs. ExPASy TrEMBL
Match: A0A6J1EXW9 (UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111439625 PE=4 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 7.4e-48
Identity = 101/142 (71.13%), Postives = 110/142 (77.46%), Query Frame = 0


Query: 1   MNMSFKNGVFEIPPILIDYYFETMMQNLIAFEHFYVGNDNKCIQCVITGTFEFTCESRNH 60
           MN+SFKNGVFEIPPILID YFETMM+NLIAFEHFYVGNDNKCIQ  ++      C  ++ 
Sbjct: 279 MNVSFKNGVFEIPPILIDDYFETMMRNLIAFEHFYVGNDNKCIQ-YVSLLEHLICTEKDV 338

Query: 61  S----------QQNCSNIEVLELFNNLYKFVTVPNCCHFNDINKALREHCNRRWNKVIAT 120
           S          +   SNIEV E+FNNL KFVTVPNC HFN INK+LREHCNRRWNK IAT
Sbjct: 339 SLLVKAGIIVNEIGGSNIEVSEMFNNLCKFVTVPNCRHFNHINKSLREHCNRRWNKAIAT 398

Query: 121 LKHNYFNTPWAIVSFHGAIFLL 133
           LKHNYFNTPWAIVSF G IFLL
Sbjct: 399 LKHNYFNTPWAIVSFLGVIFLL 419

[Close]

BLAST of CmaCh03G001940 vs. ExPASy TrEMBL
Match: A0A6J1IDP8 (UPF0481 protein At3g47200-like OS=Cucurbita maxima OX=3661 GN=LOC111472222 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 7.7e-45
Identity = 97/138 (70.29%), Postives = 105/138 (76.09%), Query Frame = 0


Query: 7   NGVFEIPPILIDYYFETMMQNLIAFEHFYVGNDNKCIQCVITGTFEFTCESRNHS----- 66
           NGVFEIPPIL D YFE MMQNLIAFEH YVGNDNKCIQ  ++      C  ++ S     
Sbjct: 209 NGVFEIPPILNDDYFEPMMQNLIAFEHVYVGNDNKCIQ-YVSLLDHLICTEKDVSVLVKA 268

Query: 67  -----QQNCSNIEVLELFNNLYKFVTVPNCCHFNDINKALREHCNRRWNKVIATLKHNYF 126
                +   S+IEV +LFNNL KFVTVPNCCHFNDINKALREHC+RRWNK IATLKHNYF
Sbjct: 269 RIIINEIGGSSIEVSKLFNNLCKFVTVPNCCHFNDINKALREHCSRRWNKAIATLKHNYF 328

Query: 127 NTPWAIVSFHGAIFLLSF 135
           NTPWAIVSF GAIFLL F
Sbjct: 329 NTPWAIVSFVGAIFLLIF 345

[Close]

BLAST of CmaCh03G001940 vs. ExPASy TrEMBL
Match: A0A6J1HBC7 (UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111462532 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 5.0e-28
Identity = 70/141 (49.65%), Postives = 92/141 (65.25%), Query Frame = 0


Query: 1   MNMSFKNGVFEIPPILIDYYFETMMQNLIAFEHFYVGNDNKCIQCVITGTFEFTCESRNH 60
           M+++FKNG+  IPP++ID +FE +M+NLIAFEHF +GN +KCIQ +       + E    
Sbjct: 294 MDINFKNGILTIPPLVIDDFFEPIMRNLIAFEHFPLGNKSKCIQYIAFMDDLISTEKDVS 353

Query: 61  ---------SQQNCSNIEVLELFNNLYKFVTVPNCCHFNDINKALREHCNRRWNKVIATL 120
                    +    SN EV +LFNNL KFV       FN+I+KALR+HCN+RWNK  A+L
Sbjct: 354 LLVQAEIIINDIGGSNKEVSKLFNNLCKFVEERCDDKFNEISKALRDHCNKRWNKAKASL 413

Query: 121 KHNYFNTPWAIVSFHGAIFLL 133
           KHNYFNTPWA +SF  A  L+
Sbjct: 414 KHNYFNTPWAAISFIAANLLI 434

[Close]

BLAST of CmaCh03G001940 vs. NCBI nr
Match: XP_022932942.1 (UPF0481 protein At3g47200-like [Cucurbita moschata])

HSP 1 Score: 204.5 bits (519), Expect = 6.2e-49
Identity = 101/144 (70.14%), Postives = 113/144 (78.47%), Query Frame = 0


Query: 1   MNMSFKNGVFEIPPILIDYYFETMMQNLIAFEHFYVGNDNKCIQCVITGTFEFTCESRNH 60
           MN+SFKNGVFEIPPILID YFETMM+NLIAFEHFYVGNDNKCIQ  ++      C  ++ 
Sbjct: 276 MNVSFKNGVFEIPPILIDDYFETMMRNLIAFEHFYVGNDNKCIQ-YVSLLDHLICTEKDV 335

Query: 61  S----------QQNCSNIEVLELFNNLYKFVTVPNCCHFNDINKALREHCNRRWNKVIAT 120
           S          +   S+IEV ELFNNL KFVT+PNCCHFNDINKAL+EHC+RRWNK IAT
Sbjct: 336 SVLVKAGIIINEIGGSSIEVSELFNNLCKFVTIPNCCHFNDINKALQEHCSRRWNKAIAT 395

Query: 121 LKHNYFNTPWAIVSFHGAIFLLSF 135
           LKHNYFNTPW +VSF GAIFLL F
Sbjct: 396 LKHNYFNTPWTVVSFVGAIFLLIF 418

[Close]

BLAST of CmaCh03G001940 vs. NCBI nr
Match: XP_022974374.1 (UPF0481 protein At3g47200-like [Cucurbita maxima])

HSP 1 Score: 203.4 bits (516), Expect = 1.4e-48
Identity = 103/144 (71.53%), Postives = 112/144 (77.78%), Query Frame = 0


Query: 1   MNMSFKNGVFEIPPILIDYYFETMMQNLIAFEHFYVGNDNKCIQCVITGTFEFTCESRNH 60
           MN+SFKNGVFEIPPIL D YFE MM+NLIAFEHFYVGNDNKCIQ  ++      C  ++ 
Sbjct: 189 MNVSFKNGVFEIPPILNDDYFEPMMRNLIAFEHFYVGNDNKCIQ-YVSLLDHLICTEKDV 248

Query: 61  S----------QQNCSNIEVLELFNNLYKFVTVPNCCHFNDINKALREHCNRRWNKVIAT 120
           S          +   S+IEV ELFNNL KFVTVPNCCHFNDINKALREHC+RRWNK IAT
Sbjct: 249 SVLVKAGIVINEIGGSSIEVSELFNNLCKFVTVPNCCHFNDINKALREHCSRRWNKAIAT 308

Query: 121 LKHNYFNTPWAIVSFHGAIFLLSF 135
           LKHNYFNTPWAIVSF GAIFLL F
Sbjct: 309 LKHNYFNTPWAIVSFVGAIFLLIF 331

[Close]

BLAST of CmaCh03G001940 vs. NCBI nr
Match: XP_022932991.1 (UPF0481 protein At3g47200-like [Cucurbita moschata])

HSP 1 Score: 199.9 bits (507), Expect = 1.5e-47
Identity = 101/142 (71.13%), Postives = 110/142 (77.46%), Query Frame = 0


Query: 1   MNMSFKNGVFEIPPILIDYYFETMMQNLIAFEHFYVGNDNKCIQCVITGTFEFTCESRNH 60
           MN+SFKNGVFEIPPILID YFETMM+NLIAFEHFYVGNDNKCIQ  ++      C  ++ 
Sbjct: 279 MNVSFKNGVFEIPPILIDDYFETMMRNLIAFEHFYVGNDNKCIQ-YVSLLEHLICTEKDV 338

Query: 61  S----------QQNCSNIEVLELFNNLYKFVTVPNCCHFNDINKALREHCNRRWNKVIAT 120
           S          +   SNIEV E+FNNL KFVTVPNC HFN INK+LREHCNRRWNK IAT
Sbjct: 339 SLLVKAGIIVNEIGGSNIEVSEMFNNLCKFVTVPNCRHFNHINKSLREHCNRRWNKAIAT 398

Query: 121 LKHNYFNTPWAIVSFHGAIFLL 133
           LKHNYFNTPWAIVSF G IFLL
Sbjct: 399 LKHNYFNTPWAIVSFLGVIFLL 419

[Close]

BLAST of CmaCh03G001940 vs. NCBI nr
Match: XP_023548424.1 (UPF0481 protein At3g47200-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.5 bits (506), Expect = 2.0e-47
Identity = 101/142 (71.13%), Postives = 109/142 (76.76%), Query Frame = 0


Query: 1   MNMSFKNGVFEIPPILIDYYFETMMQNLIAFEHFYVGNDNKCIQCVITGTFEFTCESRNH 60
           MNMSF+NGVFE+PPILID YFETMM+NLIAFEHFYVGNDNKCIQ  ++      C  ++ 
Sbjct: 279 MNMSFENGVFEMPPILIDDYFETMMRNLIAFEHFYVGNDNKCIQ-YMSLLEHLICTEKDV 338

Query: 61  S----------QQNCSNIEVLELFNNLYKFVTVPNCCHFNDINKALREHCNRRWNKVIAT 120
           S          +   SNIEV ELFNNL KFVTVPNCCHFN INK LREHCNRRWNK IAT
Sbjct: 339 SLLVKAGIIVNKIGGSNIEVSELFNNLGKFVTVPNCCHFNHINKPLREHCNRRWNKAIAT 398

Query: 121 LKHNYFNTPWAIVSFHGAIFLL 133
           LKHNYFNTPW IVSF GAI LL
Sbjct: 399 LKHNYFNTPWTIVSFLGAILLL 419

[Close]

BLAST of CmaCh03G001940 vs. NCBI nr
Match: XP_023548954.1 (UPF0481 protein At3g47200-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.1 bits (505), Expect = 2.6e-47
Identity = 100/142 (70.42%), Postives = 110/142 (77.46%), Query Frame = 0


Query: 1   MNMSFKNGVFEIPPILIDYYFETMMQNLIAFEHFYVGNDNKCIQCVITGTFEFTCESRNH 60
           MN+SFKNGVFEIPPILID YFETMM+NLIAFEHFYVGNDNKCIQ  ++      C  ++ 
Sbjct: 276 MNVSFKNGVFEIPPILIDDYFETMMRNLIAFEHFYVGNDNKCIQ-YVSLLDHLICTEKDV 335

Query: 61  S----------QQNCSNIEVLELFNNLYKFVTVPNCCHFNDINKALREHCNRRWNKVIAT 120
           S          +   S+IEV ELFNNL KFVTVPNCCHFNDINKALREHC+RRWNK  AT
Sbjct: 336 SVLVQAGIIINEIGGSSIEVSELFNNLCKFVTVPNCCHFNDINKALREHCSRRWNKAKAT 395

Query: 121 LKHNYFNTPWAIVSFHGAIFLL 133
           LKHNYFNTPWA+VS  GAI LL
Sbjct: 396 LKHNYFNTPWAVVSLVGAILLL 416

[Close]

BLAST of CmaCh03G001940 vs. TAIR 10
Match: AT3G50170.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 76.6 bits (187), Expect = 1.8e-14
Identity = 47/140 (33.57%), Postives = 68/140 (48.57%), Query Frame = 0


Query: 2   NMSFKNGVFEIPPILIDYYFETMMQNLIAFEHFYVGNDNKCIQCVITGTFEFTCESRNHS 61
           ++ FKNG  EIP +LI    +++  NLIAFE  ++ + N     +I              
Sbjct: 381 DIEFKNGYLEIPKLLIHDGTKSLFSNLIAFEQCHIESSNHITSYIIFMDNLINSSEDVSY 440

Query: 62  QQNC--------SNIEVLELFNNLYKFVTV-PNCCHFNDINKALREHCNRRWNKVIATLK 121
              C        S+ EV +LFN L + V   P   H + ++  +  + NR+WN + ATL 
Sbjct: 441 LHYCGIIEHWLGSDSEVADLFNRLCQEVVFDPKDSHLSRLSGDVNRYYNRKWNVLKATLT 500

Query: 122 HNYFNTPWAIVSFHGAIFLL 133
           H YFN PWA  SF  A+ LL
Sbjct: 501 HKYFNNPWAYFSFSAAVILL 520

[Close]

BLAST of CmaCh03G001940 vs. TAIR 10
Match: AT3G50150.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 73.2 bits (178), Expect = 2.0e-13
Identity = 48/145 (33.10%), Postives = 71/145 (48.97%), Query Frame = 0


Query: 2   NMSFKNGVFEIPPILIDYYFETMMQNLIAFEHFYVGNDNKCIQCVITGTFEFTCESRNHS 61
           ++ FKNG  +IP +LI    +++  NLIAFE  +  + N      IT    F     N S
Sbjct: 351 DIEFKNGYLKIPKLLIHDGTKSLFSNLIAFEQCHTQSSNN-----ITSYIIFMDNLINSS 410

Query: 62  QQNC-------------SNIEVLELFNNLYKFVTV-PNCCHFNDINKALREHCNRRWNKV 121
           Q                S+ EV +LFN L K V   P   + + +++ +  + +R+WN +
Sbjct: 411 QDVSYLHHDGIIEHWLGSDSEVADLFNRLCKEVIFDPKDGYLSQLSREVNRYYSRKWNSL 470

Query: 122 IATLKHNYFNTPWAIVSFHGAIFLL 133
            ATL+  YFN PWA  SF  A+ LL
Sbjct: 471 KATLRQKYFNNPWAYFSFSAAVILL 490

[Close]

BLAST of CmaCh03G001940 vs. TAIR 10
Match: AT3G50130.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 72.0 bits (175), Expect = 4.5e-13
Identity = 46/142 (32.39%), Postives = 70/142 (49.30%), Query Frame = 0


Query: 2   NMSFKNGVFEIPPILIDYYFETMMQNLIAFEHFYVGNDNKCIQCVI----------TGTF 61
           ++ FKNG  EIP +LI    +++  NLIAFE  ++ + N     +I             +
Sbjct: 406 DIRFKNGYLEIPKLLIHDGTKSLFSNLIAFEQCHIDSSNDITSYIIFMDNLIDSSEDVRY 465

Query: 62  EFTCESRNHSQQNCSNIEVLELFNNLYKFVTV-PNCCHFNDINKALREHCNRRWNKVIAT 121
              C    H   N  + EV +LFN L + V   P   + + ++  +  + +R+WN + A 
Sbjct: 466 LHYCGIIEHWLGN--DYEVADLFNRLCQEVAFDPQNSYLSQLSNKVDRNYSRKWNVLKAI 525

Query: 122 LKHNYFNTPWAIVSFHGAIFLL 133
           LKH YFN PWA  SF  A+ LL
Sbjct: 526 LKHKYFNNPWAYFSFFAALVLL 545

[Close]

BLAST of CmaCh03G001940 vs. TAIR 10
Match: AT3G50160.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 71.6 bits (174), Expect = 5.9e-13
Identity = 50/147 (34.01%), Postives = 72/147 (48.98%), Query Frame = 0


Query: 2   NMSFKNGVFEIPPILIDYYFETMMQNLIAFEHFYVGNDNKCIQCVITGTFEFTCESRNHS 61
           ++ FKNG  +IP +LI    +++  NLIAFE  ++ +  K     IT    F     N S
Sbjct: 343 DIEFKNGYLKIPKLLIHDGTKSLFLNLIAFEQCHIKSSKK-----ITSYIIFMDNLINSS 402

Query: 62  QQNC-------------SNIEVLELFNNLYKFVTV-PNCCHFNDINKALREHCNRRWNKV 121
           +                S+ EV +LFN L K V   PN  + + +   +  +  R+WN +
Sbjct: 403 EDVSYLHHYGIIENWLGSDSEVSDLFNGLGKEVIFDPNDGYLSALTGEVNIYYRRKWNYL 462

Query: 122 IATLKHNYFNTPWAIVSFHGAIFLLSF 135
            ATL+H YFN PWA  SF  A+ LL F
Sbjct: 463 KATLRHKYFNNPWAYFSFIAAVTLLIF 484

[Close]

BLAST of CmaCh03G001940 vs. TAIR 10
Match: AT3G50120.1 (Plant protein of unknown function (DUF247) )

HSP 1 Score: 71.2 bits (173), Expect = 7.6e-13
Identity = 48/154 (31.17%), Postives = 73/154 (47.40%), Query Frame = 0


Query: 2   NMSFKNGVFEIPPILIDYYFETMMQNLIAFEHFYVGNDNKCIQCVITGTFEFTCESRNHS 61
           +M FKNG  EIP +LI    +++  NLIAFE  ++ + N     +I              
Sbjct: 373 DMQFKNGYLEIPRLLIHDGTKSLFLNLIAFEQCHIDSSNDITSYIIFMDNLIDSHEDVSY 432

Query: 62  QQNC--------SNIEVLELFNNLYKFVTV-PNCCHFNDINKALREHCNRRWNKVIATLK 121
              C        S+ EV +LFN L + V       + + ++  +  + + +WN   ATLK
Sbjct: 433 LHYCGIIEHWLGSDSEVADLFNRLCQEVVFDTEDSYLSRLSIEVNRYYDHKWNAWRATLK 492

Query: 122 HNYFNTPWAIVSFHGAIFLLSFDNASNYIFWYIH 147
           H YFN PWAIVSF  A+ LL    + ++   Y +
Sbjct: 493 HKYFNNPWAIVSFCAAVILLVLTFSQSFYAVYAY 526

The following BLAST results are available for this feature:

BLAST of CmaCh03G001940 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G001940 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EY59	3.0e-49	70.14	UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111439558 PE=...	[more]
A0A6J1IHF5	6.7e-49	71.53	UPF0481 protein At3g47200-like OS=Cucurbita maxima OX=3661 GN=LOC111473012 PE=4 ...	[more]
A0A6J1EXW9	7.4e-48	71.13	UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111439625 PE=...	[more]
A0A6J1IDP8	7.7e-45	70.29	UPF0481 protein At3g47200-like OS=Cucurbita maxima OX=3661 GN=LOC111472222 PE=4 ...	[more]
A0A6J1HBC7	5.0e-28	49.65	UPF0481 protein At3g47200-like OS=Cucurbita moschata OX=3662 GN=LOC111462532 PE=...	[more]

BLAST of CmaCh03G001940 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022932942.1	6.2e-49	70.14	UPF0481 protein At3g47200-like [Cucurbita moschata]	[more]
XP_022974374.1	1.4e-48	71.53	UPF0481 protein At3g47200-like [Cucurbita maxima]	[more]
XP_022932991.1	1.5e-47	71.13	UPF0481 protein At3g47200-like [Cucurbita moschata]	[more]
XP_023548424.1	2.0e-47	71.13	UPF0481 protein At3g47200-like [Cucurbita pepo subsp. pepo]	[more]
XP_023548954.1	2.6e-47	70.42	UPF0481 protein At3g47200-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmaCh03G001940 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50170.1	1.8e-14	33.57	Plant protein of unknown function (DUF247)	[more]
AT3G50150.1	2.0e-13	33.10	Plant protein of unknown function (DUF247)	[more]
AT3G50130.1	4.5e-13	32.39	Plant protein of unknown function (DUF247)	[more]
AT3G50160.1	5.9e-13	34.01	Plant protein of unknown function (DUF247)	[more]
AT3G50120.1	7.6e-13	31.17	Plant protein of unknown function (DUF247)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004158	Protein of unknown function DUF247, plant	PFAM	PF03140	DUF247	coord: 2..38 e-value: 6.9E-7 score: 28.9 coord: 66..132 e-value: 1.0E-13 score: 51.4
None	No IPR available	PANTHER	PTHR31170	BNAC04G53230D PROTEIN	coord: 2..132
None	No IPR available	PANTHER	PTHR31170:SF13	BNAC04G53230D PROTEIN	coord: 2..132

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G001940.1	CmaCh03G001940.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane