CmaCh03G001860 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G001860
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	ATP synthase subunit alpha, chloroplastic
Location	Cma_Chr03: 2632608 .. 2632973 (-)
RNA-Seq Expression	CmaCh03G001860
Synteny	CmaCh03G001860

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGAATTGCTCACATACCAGTAAGCGAGGCTTATTTAGGTCGCGTTATAAACGCCCTGGCTAAACCTATTGATGGCCGAGGTGAAATTTCAGCTTCTGACTCTCGGTTAATTGAATCCCCCGCTCCTAGTATTATTTCGAAACGTTCTGTATATGAGCCTCTTCAAACAAGACTTATTGCTATTGATGCGATGATTCCTATCGATCGTGGTGAGCAAGAATTAATTATTGGTGACAGGCAGACCCATAAAACTGCAGTAGCCACGGATATGATTCTGAATCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTATTGGTCAAAAAGCCTCTTCTGTGGCTCAAGTAGTTACTACTTGA

mRNA sequence

ATGGGAAGAATTGCTCACATACCAGTAAGCGAGGCTTATTTAGGTCGCGTTATAAACGCCCTGGCTAAACCTATTGATGGCCGAGGTGAAATTTCAGCTTCTGACTCTCGGTTAATTGAATCCCCCGCTCCTAGTATTATTTCGAAACGTTCTGTATATGAGCCTCTTCAAACAAGACTTATTGCTATTGATGCGATGATTCCTATCGATCGTGGTGAGCAAGAATTAATTATTGGTGACAGGCAGACCCATAAAACTGCAGTAGCCACGGATATGATTCTGAATCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTATTGGTCAAAAAGCCTCTTCTGTGGCTCAAGTAGTTACTACTTGA

Coding sequence (CDS)

ATGGGAAGAATTGCTCACATACCAGTAAGCGAGGCTTATTTAGGTCGCGTTATAAACGCCCTGGCTAAACCTATTGATGGCCGAGGTGAAATTTCAGCTTCTGACTCTCGGTTAATTGAATCCCCCGCTCCTAGTATTATTTCGAAACGTTCTGTATATGAGCCTCTTCAAACAAGACTTATTGCTATTGATGCGATGATTCCTATCGATCGTGGTGAGCAAGAATTAATTATTGGTGACAGGCAGACCCATAAAACTGCAGTAGCCACGGATATGATTCTGAATCAACAAGGGCAAAATGTAATATGTGTTTATGTAGCTATTGGTCAAAAAGCCTCTTCTGTGGCTCAAGTAGTTACTACTTGA

Protein sequence

MGRIAHIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLIAIDAMIPIDRGEQELIIGDRQTHKTAVATDMILNQQGQNVICVYVAIGQKASSVAQVVTT

Homology

[Close]

BLAST of CmaCh03G001860 vs. ExPASy Swiss-Prot
Match: A0A320 (ATP synthase subunit alpha, chloroplastic OS=Coffea arabica OX=13443 GN=atpA PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.3e-52
Identity = 109/120 (90.83%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 2   GRIAHIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLI 61
           GRIA IPVSEAYLGRVINALAKPIDGRGEISAS+SRLIESPAP IIS+RSVYEPLQT LI
Sbjct: 93  GRIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLI 152

Query: 62  AIDAMIPIDRGEQELIIGDRQTHKTAVATDMILNQQGQNVICVYVAIGQKASSVAQVVTT 121
           AID+MIPI RG++ELIIGDRQT KTAVATD ILNQQGQNVICVYVAIGQKASSVAQVVTT
Sbjct: 153 AIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTT 212

[Close]

BLAST of CmaCh03G001860 vs. ExPASy Swiss-Prot
Match: B1NWD5 (ATP synthase subunit alpha, chloroplastic OS=Manihot esculenta OX=3983 GN=atpA PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.3e-52
Identity = 109/120 (90.83%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 2   GRIAHIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLI 61
           GRIA IPVSEAYLGRVINALAKPIDGRGEISAS+SRLIESPAP IIS+RSVYEPLQT LI
Sbjct: 93  GRIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLI 152

Query: 62  AIDAMIPIDRGEQELIIGDRQTHKTAVATDMILNQQGQNVICVYVAIGQKASSVAQVVTT 121
           AID+MIPI RG++ELIIGDRQT KTAVATD ILNQQGQNVICVYVAIGQKASSVAQVVTT
Sbjct: 153 AIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTT 212

[Close]

BLAST of CmaCh03G001860 vs. ExPASy Swiss-Prot
Match: Q0ZJ35 (ATP synthase subunit alpha, chloroplastic OS=Vitis vinifera OX=29760 GN=atpA PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.3e-52
Identity = 109/120 (90.83%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 2   GRIAHIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLI 61
           GRIA IPVSEAYLGRVINALAKPIDGRGEISAS+SRLIESPAP IIS+RSVYEPLQT LI
Sbjct: 93  GRIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLI 152

Query: 62  AIDAMIPIDRGEQELIIGDRQTHKTAVATDMILNQQGQNVICVYVAIGQKASSVAQVVTT 121
           AID+MIPI RG++ELIIGDRQT KTAVATD ILNQQGQNVICVYVAIGQKASSVAQVVTT
Sbjct: 153 AIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTT 212

[Close]

BLAST of CmaCh03G001860 vs. ExPASy Swiss-Prot
Match: B1A920 (ATP synthase subunit alpha, chloroplastic OS=Carica papaya OX=3649 GN=atpA PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.0e-52
Identity = 108/120 (90.00%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 2   GRIAHIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLI 61
           G+IA IPVSEAYLGRVINALAKPIDGRGEISAS+SRLIESPAP IIS+RSVYEPLQT LI
Sbjct: 93  GKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLI 152

Query: 62  AIDAMIPIDRGEQELIIGDRQTHKTAVATDMILNQQGQNVICVYVAIGQKASSVAQVVTT 121
           AID+MIPI RG++ELIIGDRQT KTAVATD ILNQQGQNVICVYVAIGQKASSVAQVVTT
Sbjct: 153 AIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTT 212

[Close]

BLAST of CmaCh03G001860 vs. ExPASy Swiss-Prot
Match: Q2L8Z1 (ATP synthase subunit alpha, chloroplastic OS=Gossypium hirsutum OX=3635 GN=atpA PE=3 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 3.0e-52
Identity = 108/120 (90.00%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 2   GRIAHIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLI 61
           G+IA IPVSEAYLGRVINALAKPIDGRGEISAS+SRLIESPAP IIS+RSVYEPLQT LI
Sbjct: 93  GKIAQIPVSEAYLGRVINALAKPIDGRGEISASESRLIESPAPGIISRRSVYEPLQTGLI 152

Query: 62  AIDAMIPIDRGEQELIIGDRQTHKTAVATDMILNQQGQNVICVYVAIGQKASSVAQVVTT 121
           AID+MIPI RG++ELIIGDRQT KTAVATD ILNQQGQNVICVYVAIGQKASSVAQVVTT
Sbjct: 153 AIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTT 212

[Close]

BLAST of CmaCh03G001860 vs. ExPASy TrEMBL
Match: A0A0S2IG79 (ATP synthase subunit alpha OS=Cucurbita moschata OX=3662 GN=atpA PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.6e-51
Identity = 111/120 (92.50%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 2   GRIAHIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLI 61
           GRIA IPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAP IIS+RSVYEPLQT LI
Sbjct: 93  GRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPGIISRRSVYEPLQTGLI 152

Query: 62  AIDAMIPIDRGEQELIIGDRQTHKTAVATDMILNQQGQNVICVYVAIGQKASSVAQVVTT 121
           AIDAMIPI RG++ELIIGDRQT KTAVATD ILNQQGQNVICVYVAIGQKASSVAQVVTT
Sbjct: 153 AIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTT 212

[Close]

BLAST of CmaCh03G001860 vs. ExPASy TrEMBL
Match: A0A0S2IE22 (ATP synthase subunit alpha OS=Cucurbita argyrosperma OX=34294 GN=atpA PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.6e-51
Identity = 111/120 (92.50%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 2   GRIAHIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLI 61
           GRIA IPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAP IIS+RSVYEPLQT LI
Sbjct: 93  GRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPGIISRRSVYEPLQTGLI 152

Query: 62  AIDAMIPIDRGEQELIIGDRQTHKTAVATDMILNQQGQNVICVYVAIGQKASSVAQVVTT 121
           AIDAMIPI RG++ELIIGDRQT KTAVATD ILNQQGQNVICVYVAIGQKASSVAQVVTT
Sbjct: 153 AIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTT 212

[Close]

BLAST of CmaCh03G001860 vs. ExPASy TrEMBL
Match: A0A2H4T1V9 (ATP synthase subunit alpha, chloroplastic OS=Cucurbita maxima OX=3661 GN=atpA PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.6e-51
Identity = 111/120 (92.50%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 2   GRIAHIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLI 61
           GRIA IPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAP IIS+RSVYEPLQT LI
Sbjct: 93  GRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPGIISRRSVYEPLQTGLI 152

Query: 62  AIDAMIPIDRGEQELIIGDRQTHKTAVATDMILNQQGQNVICVYVAIGQKASSVAQVVTT 121
           AIDAMIPI RG++ELIIGDRQT KTAVATD ILNQQGQNVICVYVAIGQKASSVAQVVTT
Sbjct: 153 AIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTT 212

[Close]

BLAST of CmaCh03G001860 vs. ExPASy TrEMBL
Match: A0A0S2IHI4 (ATP synthase subunit alpha OS=Cucurbita pepo var. texana OX=37651 GN=atpA PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.6e-51
Identity = 111/120 (92.50%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 2   GRIAHIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLI 61
           GRIA IPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAP IIS+RSVYEPLQT LI
Sbjct: 93  GRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPGIISRRSVYEPLQTGLI 152

Query: 62  AIDAMIPIDRGEQELIIGDRQTHKTAVATDMILNQQGQNVICVYVAIGQKASSVAQVVTT 121
           AIDAMIPI RG++ELIIGDRQT KTAVATD ILNQQGQNVICVYVAIGQKASSVAQVVTT
Sbjct: 153 AIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTT 212

[Close]

BLAST of CmaCh03G001860 vs. ExPASy TrEMBL
Match: A0A0S2IH79 (ATP synthase subunit alpha OS=Cucurbita pepo subsp. fraterna OX=37649 GN=atpA PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 7.6e-51
Identity = 111/120 (92.50%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 2   GRIAHIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLI 61
           GRIA IPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAP IIS+RSVYEPLQT LI
Sbjct: 93  GRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPGIISRRSVYEPLQTGLI 152

Query: 62  AIDAMIPIDRGEQELIIGDRQTHKTAVATDMILNQQGQNVICVYVAIGQKASSVAQVVTT 121
           AIDAMIPI RG++ELIIGDRQT KTAVATD ILNQQGQNVICVYVAIGQKASSVAQVVTT
Sbjct: 153 AIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTT 212

[Close]

BLAST of CmaCh03G001860 vs. NCBI nr
Match: YP_009505065.1 (ATP synthase CF1 alpha subunit [Cucurbita pepo] >ALO21744.1 AtpA [Cucurbita argyrosperma] >ALO21775.1 AtpA [Cucurbita argyrosperma var. palmeri] >ALO21877.1 AtpA [Cucurbita argyrosperma subsp. sororia] >ALO22589.1 AtpA [Cucurbita pepo subsp. fraterna] >ALO22636.1 AtpA [Cucurbita pepo subsp. ovifera] >ALO22733.1 AtpA [Cucurbita pepo var. ozarkana] >ALO22734.1 AtpA [Cucurbita pepo subsp. pepo] >ALO22815.1 AtpA [Cucurbita pepo var. texana])

HSP 1 Score: 209.5 bits (532), Expect = 1.6e-50
Identity = 111/120 (92.50%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 2   GRIAHIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLI 61
           GRIA IPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAP IIS+RSVYEPLQT LI
Sbjct: 93  GRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPGIISRRSVYEPLQTGLI 152

Query: 62  AIDAMIPIDRGEQELIIGDRQTHKTAVATDMILNQQGQNVICVYVAIGQKASSVAQVVTT 121
           AIDAMIPI RG++ELIIGDRQT KTAVATD ILNQQGQNVICVYVAIGQKASSVAQVVTT
Sbjct: 153 AIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTT 212

[Close]

BLAST of CmaCh03G001860 vs. NCBI nr
Match: YP_009447520.1 (ATP synthase CF1 alpha subunit [Cucurbita moschata] >ALO22375.1 AtpA [Cucurbita moschata] >ATY69952.1 ATP synthase CF1 alpha subunit [Cucurbita moschata])

HSP 1 Score: 209.5 bits (532), Expect = 1.6e-50
Identity = 111/120 (92.50%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 2   GRIAHIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLI 61
           GRIA IPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAP IIS+RSVYEPLQT LI
Sbjct: 93  GRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPGIISRRSVYEPLQTGLI 152

Query: 62  AIDAMIPIDRGEQELIIGDRQTHKTAVATDMILNQQGQNVICVYVAIGQKASSVAQVVTT 121
           AIDAMIPI RG++ELIIGDRQT KTAVATD ILNQQGQNVICVYVAIGQKASSVAQVVTT
Sbjct: 153 AIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTT 212

[Close]

BLAST of CmaCh03G001860 vs. NCBI nr
Match: YP_009447435.1 (ATP synthase CF1 alpha subunit [Cucurbita maxima] >ALO22292.1 AtpA [Cucurbita maxima subsp. andreana] >ATY69869.1 ATP synthase CF1 alpha subunit [Cucurbita maxima])

HSP 1 Score: 209.5 bits (532), Expect = 1.6e-50
Identity = 111/120 (92.50%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 2   GRIAHIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLI 61
           GRIA IPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAP IIS+RSVYEPLQT LI
Sbjct: 93  GRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPGIISRRSVYEPLQTGLI 152

Query: 62  AIDAMIPIDRGEQELIIGDRQTHKTAVATDMILNQQGQNVICVYVAIGQKASSVAQVVTT 121
           AIDAMIPI RG++ELIIGDRQT KTAVATD ILNQQGQNVICVYVAIGQKASSVAQVVTT
Sbjct: 153 AIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTT 212

[Close]

BLAST of CmaCh03G001860 vs. NCBI nr
Match: ALO22253.1 (AtpA [Cucurbita lundelliana] >ALO22414.1 AtpA [Cucurbita okeechobeensis] >ALO22492.1 AtpA [Cucurbita okeechobeensis subsp. martinezii])

HSP 1 Score: 209.5 bits (532), Expect = 1.6e-50
Identity = 111/120 (92.50%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 2   GRIAHIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLI 61
           GRIA IPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAP IIS+RSVYEPLQT LI
Sbjct: 93  GRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPGIISRRSVYEPLQTGLI 152

Query: 62  AIDAMIPIDRGEQELIIGDRQTHKTAVATDMILNQQGQNVICVYVAIGQKASSVAQVVTT 121
           AIDAMIPI RG++ELIIGDRQT KTAVATD ILNQQGQNVICVYVAIGQKASSVAQVVTT
Sbjct: 153 AIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTT 212

[Close]

BLAST of CmaCh03G001860 vs. NCBI nr
Match: ALO22033.1 (AtpA [Cucurbita ecuadorensis])

HSP 1 Score: 209.5 bits (532), Expect = 1.6e-50
Identity = 111/120 (92.50%), Postives = 114/120 (95.00%), Query Frame = 0


Query: 2   GRIAHIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLI 61
           GRIA IPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAP IIS+RSVYEPLQT LI
Sbjct: 93  GRIAQIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPGIISRRSVYEPLQTGLI 152

Query: 62  AIDAMIPIDRGEQELIIGDRQTHKTAVATDMILNQQGQNVICVYVAIGQKASSVAQVVTT 121
           AIDAMIPI RG++ELIIGDRQT KTAVATD ILNQQGQNVICVYVAIGQKASSVAQVVTT
Sbjct: 153 AIDAMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTT 212

[Close]

BLAST of CmaCh03G001860 vs. TAIR 10
Match: ATCG00120.1 (ATP synthase subunit alpha )

HSP 1 Score: 200.7 bits (509), Expect = 6.8e-52
Identity = 105/120 (87.50%), Postives = 113/120 (94.17%), Query Frame = 0


Query: 2   GRIAHIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLI 61
           G+IA IPVSEAYLGRVINALA PIDGRG+ISAS+SRLIESPAP IIS+RSVYEPLQT LI
Sbjct: 93  GKIAQIPVSEAYLGRVINALANPIDGRGKISASESRLIESPAPGIISRRSVYEPLQTGLI 152

Query: 62  AIDAMIPIDRGEQELIIGDRQTHKTAVATDMILNQQGQNVICVYVAIGQKASSVAQVVTT 121
           AID+MIPI RG++ELIIGDRQT KTAVATD ILNQQGQNVICVYVAIGQKASSVAQVVT+
Sbjct: 153 AIDSMIPIGRGQRELIIGDRQTGKTAVATDTILNQQGQNVICVYVAIGQKASSVAQVVTS 212

[Close]

BLAST of CmaCh03G001860 vs. TAIR 10
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein )

HSP 1 Score: 127.1 bits (318), Expect = 9.6e-30
Identity = 62/129 (48.06%), Postives = 90/129 (69.77%), Query Frame = 0


Query: 2   GRIAHIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLI 61
           G I  +P  +A LGRV++A+  PIDG+G +S  + R +E  AP I+ ++SV+EP+QT L 
Sbjct: 364 GSIVDVPAGKAMLGRVVDAMGVPIDGKGALSDHEQRRVEVKAPGILERKSVHEPMQTGLK 423

Query: 62  AIDAMIPIDRGEQELIIGDRQTHKTAVATDMILNQ---------QGQNVICVYVAIGQKA 121
           A+D+++PI RG++EL+IGDRQT KT +A D ILNQ         + + + CVYVAIGQK 
Sbjct: 424 AVDSLVPIGRGQRELLIGDRQTGKTTIAIDTILNQKQINSRATSESETMYCVYVAIGQKR 483

[Close]

BLAST of CmaCh03G001860 vs. TAIR 10
Match: ATMG01190.1 (ATP synthase subunit 1 )

HSP 1 Score: 124.4 bits (311), Expect = 6.2e-29
Identity = 61/129 (47.29%), Postives = 89/129 (68.99%), Query Frame = 0


Query: 2   GRIAHIPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLI 61
           G I  +P  +A LGRV++A+  PIDG+G +S  + R +E  AP I+ ++SV+EP+QT L 
Sbjct: 94  GSIVDVPAGKAMLGRVVDAMGVPIDGKGALSDHEQRRVEVKAPGILERKSVHEPMQTGLK 153

Query: 62  AIDAMIPIDRGEQELIIGDRQTHKTAVATDMILNQ---------QGQNVICVYVAIGQKA 121
           A+D+++PI RG++EL+IG RQT KT +A D ILNQ         + + + CVYVAIGQK 
Sbjct: 154 AVDSLVPIGRGQRELLIGGRQTGKTTIAIDTILNQKQINSRATSESETMYCVYVAIGQKR 213

[Close]

BLAST of CmaCh03G001860 vs. TAIR 10
Match: AT5G08670.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-08
Identity = 32/106 (30.19%), Postives = 53/106 (50.00%), Query Frame = 0


Query: 7   IPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLIAIDAM 66
           +PV  A LGR++N L +PID RGEI       I   AP+++   +  E L T +  +D +
Sbjct: 159 VPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKVVDLL 218

Query: 67  IPIDRGEQELIIGDRQTHKTAVATDMILN-QQGQNVICVYVAIGQK 112
            P  RG +  + G     KT +  ++I N  +      V+  +G++
Sbjct: 219 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 264

[Close]

BLAST of CmaCh03G001860 vs. TAIR 10
Match: AT5G08680.1 (ATP synthase alpha/beta family protein )

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-08
Identity = 32/106 (30.19%), Postives = 53/106 (50.00%), Query Frame = 0


Query: 7   IPVSEAYLGRVINALAKPIDGRGEISASDSRLIESPAPSIISKRSVYEPLQTRLIAIDAM 66
           +PV  A LGR++N L +PID RGEI       I   AP+++   +  E L T +  +D +
Sbjct: 162 VPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKVVDLL 221

Query: 67  IPIDRGEQELIIGDRQTHKTAVATDMILN-QQGQNVICVYVAIGQK 112
            P  RG +  + G     KT +  ++I N  +      V+  +G++
Sbjct: 222 APYQRGGKIGLFGGAGVGKTVLIMELINNVAKAHGGFSVFAGVGER 267

The following BLAST results are available for this feature:

BLAST of CmaCh03G001860 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0A320	1.3e-52	90.83	ATP synthase subunit alpha, chloroplastic OS=Coffea arabica OX=13443 GN=atpA PE=...	[more]
B1NWD5	1.3e-52	90.83	ATP synthase subunit alpha, chloroplastic OS=Manihot esculenta OX=3983 GN=atpA P...	[more]
Q0ZJ35	1.3e-52	90.83	ATP synthase subunit alpha, chloroplastic OS=Vitis vinifera OX=29760 GN=atpA PE=...	[more]
B1A920	3.0e-52	90.00	ATP synthase subunit alpha, chloroplastic OS=Carica papaya OX=3649 GN=atpA PE=3 ...	[more]
Q2L8Z1	3.0e-52	90.00	ATP synthase subunit alpha, chloroplastic OS=Gossypium hirsutum OX=3635 GN=atpA ...	[more]

BLAST of CmaCh03G001860 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0S2IG79	7.6e-51	92.50	ATP synthase subunit alpha OS=Cucurbita moschata OX=3662 GN=atpA PE=3 SV=1	[more]
A0A0S2IE22	7.6e-51	92.50	ATP synthase subunit alpha OS=Cucurbita argyrosperma OX=34294 GN=atpA PE=3 SV=1	[more]
A0A2H4T1V9	7.6e-51	92.50	ATP synthase subunit alpha, chloroplastic OS=Cucurbita maxima OX=3661 GN=atpA PE...	[more]
A0A0S2IHI4	7.6e-51	92.50	ATP synthase subunit alpha OS=Cucurbita pepo var. texana OX=37651 GN=atpA PE=3 S...	[more]
A0A0S2IH79	7.6e-51	92.50	ATP synthase subunit alpha OS=Cucurbita pepo subsp. fraterna OX=37649 GN=atpA PE...	[more]

BLAST of CmaCh03G001860 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_009505065.1	1.6e-50	92.50	ATP synthase CF1 alpha subunit [Cucurbita pepo] >ALO21744.1 AtpA [Cucurbita argy...	[more]
YP_009447520.1	1.6e-50	92.50	ATP synthase CF1 alpha subunit [Cucurbita moschata] >ALO22375.1 AtpA [Cucurbita ...	[more]
YP_009447435.1	1.6e-50	92.50	ATP synthase CF1 alpha subunit [Cucurbita maxima] >ALO22292.1 AtpA [Cucurbita ma...	[more]
ALO22253.1	1.6e-50	92.50	AtpA [Cucurbita lundelliana] >ALO22414.1 AtpA [Cucurbita okeechobeensis] >ALO224...	[more]
ALO22033.1	1.6e-50	92.50	AtpA [Cucurbita ecuadorensis]	[more]

BLAST of CmaCh03G001860 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00120.1	6.8e-52	87.50	ATP synthase subunit alpha	[more]
AT2G07698.1	9.6e-30	48.06	ATPase, F1 complex, alpha subunit protein	[more]
ATMG01190.1	6.2e-29	47.29	ATP synthase subunit 1	[more]
AT5G08670.1	1.2e-08	30.19	ATP synthase alpha/beta family protein	[more]
AT5G08680.1	1.2e-08	30.19	ATP synthase alpha/beta family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	PFAM	PF00006	ATP-synt_ab	coord: 62..120 e-value: 2.7E-11 score: 43.6
None	No IPR available	GENE3D	3.40.50.12240		coord: 1..121 e-value: 2.5E-40 score: 140.5
None	No IPR available	PANTHER	PTHR48082:SF6	ATP SYNTHASE SUBUNIT ALPHA, CHLOROPLASTIC	coord: 2..121
None	No IPR available	PANTHER	PTHR48082	ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL	coord: 2..121
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 6..120

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G001860.1	CmaCh03G001860.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046961	proton-transporting ATPase activity, rotational mechanism
molecular_function	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism