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CmaCh03G001620 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GGGTTTCTTCTGTCGTCTGAAGCTGTCCGAAGGGTTCTGTGGTTTTTTTTTCCCGGTTGTCTCGCTTATCTTCTACTCTTCACCAACGCCATGACTGCTCAGACTCAGGAAGAGCTTCTCGCCGCCCAGCTTGATGAGCAAAAGATTAATGTAATCTTTCTCTTTTACTCCCTCTGTCGTGTCCTTTCCTTGCTAGAACTGAAAGATTTGTCACAAGAAACTCAGTCTTAGATCATTTTTTCCCCTTTTTCTTAAGAGTTGCTTCTGATTTGTGGTAGTTTGAAATCAGCTGCAATGATGGATTTTTTTTTTCAGCTCATTTTGTGATCTGAGCAATTTCGTTCTTCGAATCCAATGTTTTATTAGTTCGAAATTCCAGTACATGAAGCAATTTTCTCGCTCTGTTTCAAGTCATGTTCGTGTTAGTTTTGGAGGAGATTAGCTTGTGGTGACTGAATCCGTCGCGATGTAATTTCTTTTTTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTGTTGTTGCTAAATCAGTTTTATTGAAAGCGTTTGGGGTGCATTTAATTGGAATATCTGCATTTTAGAATCACGTGATTGTATTGTATTAATGATGTATGTGTTAGAAGAACACAACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAAGTCTCGTGGCTTTGCTTTGGGCTTCCCCCAAAGGCCTCATACAAATGGAGAGAGTATTCCTTCATTATAAACCTATGATCATTCCTAAATTAACCAATGTGGGACCTTGGTCATCCAATGTATCATCATTCAGTTGTTCATTTTCCAAGATAACAAAATGCTAACTACTTGGTATTTTCCACCGTAAGACTTACAAGTATATTTTCATAATTTTTTAATCAATGTTCTGCTAATGATATTGCAGTCTGATGAACCTGTAATTGAGGACGATGACGACGAAGATGATGAAGAAGATGATGACAAGGACGAGGATGATGCTGAAGGTAGGTGAATATTGAACAAGTAACCTTGTACATGGATTTCCTCATAAATTTCTTTATTTAACTCTTAAGTTCCTTACTTTTTCCTGTATTGTGCATATGATTACGCATTATAGCCTTTTCCAAATCTCATCAATTCATTTGGTTGATTCTGATATAAGGTGAATACAAGAAGGAGCCTTGGGAGTTGAGTTATTGTTTTCTTCAGCATTTTCTCCACTCGGTTGCTTTCTAAAGCTAAATATGATTGAATTTGTGGAATTCTTTATGTTATTTTCTTATTCATTGTTCATGTGCAGTGGTGCAGGGCATATAAACGAGTTTAAGTTTTGATTAACAGAGACTTGATCAGTAATTTTATCTAGTGAATGCAGATAATTTATGTTTCTTTCCATTTAGTTTGGAATGTTGCCTTGATCTCTCTCTGTCTTGTGTCCGTGTGTTGCACATGCATTACTTGGTTAGTATCTGTTGTGAGAATAGAGTTTCTTGTGGCAGGGCACGGAGAGGCCAGTGGCAGGTCGAAGCAAAGCAGAAGCGAAAAAAAGAGTCGCAAAGCAATGCTGAAACTTGGAATGAAGCCAATCCCGAGTGTGAGCCGTGTCACGGTCAAGAAGAGCAAGAATGTTGGTTTTCTCGACATCTGAAGTTCGATTTTCTAAATCGATTCAGTCCCAGATACGTCTAATATCGATGTCATTTTCATTGCAGATTCTTTTTGTCATTTCGAAACCAGATGTCTTCAAGAGCCCGACTTCCGATACCTACGTCATTTTTGGGGAAGCAAAGATTGAAGATTTGAGCTCCCAGCTACAGACCCAGGCTGCAGAGCAGTTCAAGGCTCCTAATTTGAGTAATTTGACATCAAAGCCTGAGGCACCAACCATTGCTCAAGATGACGAAGTAGTCGATGAGTCCGGGGTTGAACCGAAGGACATCGAACTGGTGATGACTCAAGCTGGGGTATCGAGACCAAGGGCCGTGAAAGCACTCAAAGCAGCGGATGGTGATATCGTGTCTGCCATTATGGAACTTACAAATTAATAAGAGAGCTCTATCAGGTGGAGTGTTGGAATCTTTTCTTCCTTCTTTTCCCCCCTCTGTTTCAGCTGCAGAATTTGAAGTTCTGAGATTTTAATGTTTTATAAACTCTGGATTGATTATGAGTTCAACTATGTACTATTTCTTTCATGGGGTTCTTCACATTGGATAATAGGATCATTTTACTTAAAACACGAAAGGATAATAGTAATTATTCTAGAACATAACATCGGCCTAGCATTCTCTGGTGCTCTTGTTGGACACCCAGTAAGAATAGTGACCGTTGTAGCTTTCTCTGGTGCTCTTGTTGGACATCCAGTAAGAATAGTGACCGTTGTAG GGGTTTCTTCTGTCGTCTGAAGCTGTCCGAAGGGTTCTGTGGTTTTTTTTTCCCGGTTGTCTCGCTTATCTTCTACTCTTCACCAACGCCATGACTGCTCAGACTCAGGAAGAGCTTCTCGCCGCCCAGCTTGATGAGCAAAAGATTAATTCTGATGAACCTGTAATTGAGGACGATGACGACGAAGATGATGAAGAAGATGATGACAAGGACGAGGATGATGCTGAAGGGCACGGAGAGGCCAGTGGCAGGTCGAAGCAAAGCAGAAGCGAAAAAAAGAGTCGCAAAGCAATGCTGAAACTTGGAATGAAGCCAATCCCGAGTGTGAGCCGTGTCACGGTCAAGAAGAGCAAGAATATTCTTTTTGTCATTTCGAAACCAGATGTCTTCAAGAGCCCGACTTCCGATACCTACGTCATTTTTGGGGAAGCAAAGATTGAAGATTTGAGCTCCCAGCTACAGACCCAGGCTGCAGAGCAGTTCAAGGCTCCTAATTTGAGTAATTTGACATCAAAGCCTGAGGCACCAACCATTGCTCAAGATGACGAAGTAGTCGATGAGTCCGGGGTTGAACCGAAGGACATCGAACTGGTGATGACTCAAGCTGGGGTATCGAGACCAAGGGCCGTGAAAGCACTCAAAGCAGCGGATGGTGATATCGTGTCTGCCATTATGGAACTTACAAATTAATAAGAGAGCTCTATCAGGTGGAGTGTTGGAATCTTTTCTTCCTTCTTTTCCCCCCTCTGTTTCAGCTGCAGAATTTGAAGTTCTGAGATTTTAATGTTTTATAAACTCTGGATTGATTATGAGTTCAACTATGTACTATTTCTTTCATGGGGTTCTTCACATTGGATAATAGGATCATTTTACTTAAAACACGAAAGGATAATAGTAATTATTCTAGAACATAACATCGGCCTAGCATTCTCTGGTGCTCTTGTTGGACACCCAGTAAGAATAGTGACCGTTGTAGCTTTCTCTGGTGCTCTTGTTGGACATCCAGTAAGAATAGTGACCGTTGTAG ATGACTGCTCAGACTCAGGAAGAGCTTCTCGCCGCCCAGCTTGATGAGCAAAAGATTAATTCTGATGAACCTGTAATTGAGGACGATGACGACGAAGATGATGAAGAAGATGATGACAAGGACGAGGATGATGCTGAAGGGCACGGAGAGGCCAGTGGCAGGTCGAAGCAAAGCAGAAGCGAAAAAAAGAGTCGCAAAGCAATGCTGAAACTTGGAATGAAGCCAATCCCGAGTGTGAGCCGTGTCACGGTCAAGAAGAGCAAGAATATTCTTTTTGTCATTTCGAAACCAGATGTCTTCAAGAGCCCGACTTCCGATACCTACGTCATTTTTGGGGAAGCAAAGATTGAAGATTTGAGCTCCCAGCTACAGACCCAGGCTGCAGAGCAGTTCAAGGCTCCTAATTTGAGTAATTTGACATCAAAGCCTGAGGCACCAACCATTGCTCAAGATGACGAAGTAGTCGATGAGTCCGGGGTTGAACCGAAGGACATCGAACTGGTGATGACTCAAGCTGGGGTATCGAGACCAAGGGCCGTGAAAGCACTCAAAGCAGCGGATGGTGATATCGTGTCTGCCATTATGGAACTTACAAATTAA MTAQTQEELLAAQLDEQKINSDEPVIEDDDDEDDEEDDDKDEDDAEGHGEASGRSKQSRSEKKSRKAMLKLGMKPIPSVSRVTVKKSKNILFVISKPDVFKSPTSDTYVIFGEAKIEDLSSQLQTQAAEQFKAPNLSNLTSKPEAPTIAQDDEVVDESGVEPKDIELVMTQAGVSRPRAVKALKAADGDIVSAIMELTN Homology
BLAST of CmaCh03G001620 vs. ExPASy Swiss-Prot
Match: Q9LHG9 (Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1) HSP 1 Score: 263.8 bits (673), Expect = 1.5e-69 Identity = 157/198 (79.29%), Postives = 178/198 (89.90%), Query Frame = 0
BLAST of CmaCh03G001620 vs. ExPASy Swiss-Prot
Match: Q6ICZ8 (Nascent polypeptide-associated complex subunit alpha-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g13850 PE=1 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 1.1e-67 Identity = 160/206 (77.67%), Postives = 176/206 (85.44%), Query Frame = 0
BLAST of CmaCh03G001620 vs. ExPASy Swiss-Prot
Match: Q9M612 (Nascent polypeptide-associated complex subunit alpha-like protein OS=Pinus taeda OX=3352 PE=2 SV=1) HSP 1 Score: 257.3 bits (656), Expect = 1.4e-67 Identity = 151/195 (77.44%), Postives = 176/195 (90.26%), Query Frame = 0
BLAST of CmaCh03G001620 vs. ExPASy Swiss-Prot
Match: Q94JX9 (Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At3g49470 PE=2 SV=2) HSP 1 Score: 214.5 bits (545), Expect = 1.1e-54 Identity = 124/189 (65.61%), Postives = 157/189 (83.07%), Query Frame = 0
BLAST of CmaCh03G001620 vs. ExPASy Swiss-Prot
Match: Q9SZY1 (Nascent polypeptide-associated complex subunit alpha-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g10480 PE=1 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 2.2e-52 Identity = 130/202 (64.36%), Postives = 163/202 (80.69%), Query Frame = 0
BLAST of CmaCh03G001620 vs. ExPASy TrEMBL
Match: A0A6J1HTD9 (nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111467280 PE=4 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 6.0e-93 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of CmaCh03G001620 vs. ExPASy TrEMBL
Match: A0A6J1GEH6 (nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111453435 PE=4 SV=1) HSP 1 Score: 345.5 bits (885), Expect = 1.5e-91 Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of CmaCh03G001620 vs. ExPASy TrEMBL
Match: A0A5D3CE91 (Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold447G00610 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 1.4e-86 Identity = 187/200 (93.50%), Postives = 195/200 (97.50%), Query Frame = 0
BLAST of CmaCh03G001620 vs. ExPASy TrEMBL
Match: A0A1S3C2B6 (nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103495855 PE=4 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 1.4e-86 Identity = 187/200 (93.50%), Postives = 195/200 (97.50%), Query Frame = 0
BLAST of CmaCh03G001620 vs. ExPASy TrEMBL
Match: A0A6J1GFD6 (nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111453434 PE=4 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 2.4e-86 Identity = 186/200 (93.00%), Postives = 194/200 (97.00%), Query Frame = 0
BLAST of CmaCh03G001620 vs. NCBI nr
Match: XP_022967906.1 (nascent polypeptide-associated complex subunit alpha-like protein 1 [Cucurbita maxima]) HSP 1 Score: 350.1 bits (897), Expect = 1.2e-92 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of CmaCh03G001620 vs. NCBI nr
Match: XP_022950316.1 (nascent polypeptide-associated complex subunit alpha-like protein 1 [Cucurbita moschata] >XP_023543494.1 nascent polypeptide-associated complex subunit alpha-like protein 1 [Cucurbita pepo subsp. pepo] >KAG6603422.1 hypothetical protein SDJN03_04031, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 345.5 bits (885), Expect = 3.0e-91 Identity = 199/200 (99.50%), Postives = 199/200 (99.50%), Query Frame = 0
BLAST of CmaCh03G001620 vs. NCBI nr
Match: KAG7013853.1 (hypothetical protein SDJN02_24022 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 329.7 bits (844), Expect = 1.7e-86 Identity = 190/191 (99.48%), Postives = 190/191 (99.48%), Query Frame = 0
BLAST of CmaCh03G001620 vs. NCBI nr
Match: XP_008455754.2 (PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 1 [Cucumis melo]) HSP 1 Score: 328.9 bits (842), Expect = 2.9e-86 Identity = 187/200 (93.50%), Postives = 195/200 (97.50%), Query Frame = 0
BLAST of CmaCh03G001620 vs. NCBI nr
Match: KAA0025796.1 (nascent polypeptide-associated complex subunit alpha-like protein 1 [Cucumis melo var. makuwa] >TYK09660.1 nascent polypeptide-associated complex subunit alpha-like protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 328.9 bits (842), Expect = 2.9e-86 Identity = 187/200 (93.50%), Postives = 195/200 (97.50%), Query Frame = 0
BLAST of CmaCh03G001620 vs. TAIR 10
Match: AT3G12390.1 (Nascent polypeptide-associated complex (NAC), alpha subunit family protein ) HSP 1 Score: 263.8 bits (673), Expect = 1.1e-70 Identity = 157/198 (79.29%), Postives = 178/198 (89.90%), Query Frame = 0
BLAST of CmaCh03G001620 vs. TAIR 10
Match: AT5G13850.1 (nascent polypeptide-associated complex subunit alpha-like protein 3 ) HSP 1 Score: 257.7 bits (657), Expect = 7.7e-69 Identity = 160/206 (77.67%), Postives = 176/206 (85.44%), Query Frame = 0
BLAST of CmaCh03G001620 vs. TAIR 10
Match: AT3G49470.1 (nascent polypeptide-associated complex subunit alpha-like protein 2 ) HSP 1 Score: 214.5 bits (545), Expect = 7.5e-56 Identity = 124/189 (65.61%), Postives = 157/189 (83.07%), Query Frame = 0
BLAST of CmaCh03G001620 vs. TAIR 10
Match: AT4G10480.1 (Nascent polypeptide-associated complex (NAC), alpha subunit family protein ) HSP 1 Score: 206.8 bits (525), Expect = 1.6e-53 Identity = 130/202 (64.36%), Postives = 163/202 (80.69%), Query Frame = 0
BLAST of CmaCh03G001620 vs. TAIR 10
Match: AT4G10480.2 (Nascent polypeptide-associated complex (NAC), alpha subunit family protein ) HSP 1 Score: 206.1 bits (523), Expect = 2.7e-53 Identity = 130/203 (64.04%), Postives = 161/203 (79.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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