CmaCh03G001080 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G001080
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	Unknown protein
Location	Cma_Chr03: 1109564 .. 1110741 (-)
RNA-Seq Expression	CmaCh03G001080
Synteny	CmaCh03G001080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGTCTTATTGGTCTCGAAGCTCTTTAGCTAAAACCCCTAAAACCCCTAAAACCTCTGCAGCGAACTTGGACGTCGTCGACGAACTCACAGAGGCCCGTCCATTGCCCGTCCACGACATCCACCTCCGACAGGGTTCTCTGCAACAAACCATCTGTGCGACGGCGACGCGATTCTCGACGGTGGGGGGACAACAAGGGTATCCTTTAACGAATCTGAAATTGCTTTGGTTTATGAATAACGCTTCGTTTGACTTCAAATCTGAAAATTATGGTCTATGATTGATTTTGGGTAAGAATATCCCTCCAGTACAATCGTATGCCAATTCAAGAAATTTAAGAAATTTTTGTTCTCATATCTATGAACAACTAAATTTCTTGAAAGTCTTGAAAGTTCTGTTTTCATGTTAGTCTTTGGAATTTTTTTCTTTTAAGATATTCAAGGTTTGATAGTTTTAATTTGCAAGTTTTGGTTGAGTGGAAGCTTTGTTCATTGACATTTGGTTTTGAAAGCATCATTTGTAACGAAATTTTTAGCTGAAGGTTTTATGAAAGATTGCGTTGCTTTAAAAGTGTTGTAAATGGGTGTATTTTCTTGTTTACAATTTTTTTTTTGAAAGAAAATGAATGTGAGATCCCATATCCATTGGGGAGGAGAAGGAAACCCCCTTTATAAGGGTGTGGAAACCTCTCCCTATTAGATCCGTTTTAAAAATTTTGAGAGGAAGCCCGAAAGGGAAAGCCCGAAGTGGACAATATTTTCAAGCGGTGGGTTTGAACCCTTACAAATGGTATTAGAGCCAGACACCGGGCGATGTGTGAGCGAAGAGGCTGAGCCCCGAATGGGGTGGATTTGGTGAGGGTCTCACATCAATTGGAGAACAGAATGAGTGCCAGTGAGGACAATGGGCCCCATAGGGGGGTGGATTGTGAGATCTCACGTCGGTTGGGAAGGAGAAGGAAACACCCTTTATAAGGATGTGGAAACCTCTCCTTAGTGGACGCGTTTTAAAAACCTTGAGAGGAAGCCCGAAAGGAAAAACTCAAAGAGGACAACATTTGCTAGCGGTGGGCTTGAGCTATTATAATGAATTTCAAAATTTGATATGGGAATGGCTTATTGAGTATTTTTATATTCATTTTTGCTTTTCCAAAATGTTTTCAGATGGAGGTTCTGA

mRNA sequence

ATGGTGTCTTATTGGTCTCGAAGCTCTTTAGCTAAAACCCCTAAAACCCCTAAAACCTCTGCAGCGAACTTGGACGTCGTCGACGAACTCACAGAGGCCCGTCCATTGCCCGTCCACGACATCCACCTCCGACAGGGTTCTCTGCAACAAACCATCTGTGCGACGGCGACGCGATTCTCGACGGTGGGGGGACAACAAGGATGGAGGTTCTGA

Coding sequence (CDS)

ATGGTGTCTTATTGGTCTCGAAGCTCTTTAGCTAAAACCCCTAAAACCCCTAAAACCTCTGCAGCGAACTTGGACGTCGTCGACGAACTCACAGAGGCCCGTCCATTGCCCGTCCACGACATCCACCTCCGACAGGGTTCTCTGCAACAAACCATCTGTGCGACGGCGACGCGATTCTCGACGGTGGGGGGACAACAAGGATGGAGGTTCTGA

Protein sequence

MVSYWSRSSLAKTPKTPKTSAANLDVVDELTEARPLPVHDIHLRQGSLQQTICATATRFSTVGGQQGWRF

Homology

The following BLAST results are available for this feature:

BLAST of CmaCh03G001080 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G001080 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G001080 vs.


Match Name	E-value	Identity	Description

BLAST of CmaCh03G001080 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G001080.1	CmaCh03G001080.1	mRNA