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CmaCh03G001040 (gene) Cucurbita maxima (Rimu) v1.1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTGAGAAGAAGAAAATGAAGGTAAAGAAAGGATGGTTAGCTGTGGAAGTAGGGTTGCTAGAGGAAGATGGAAGAATAGAACGATTTGTGGTTCCGATATCCTACTTACATCACCCTCTTTTCAAGAACCTCTTGGACAAAGCTCAAGAAGTCTATGGCTACCATGCCAATGGCCCTCTTCGACTTCCGTGCTCGGTCGACGACTTTCTCCAACTTCGATGGCAGATTGAGAAAGAATCCGACCAAAACAACGACAAACAAAACCACCAGAACCATCGCCATCGTCATTACCCTTACCACTATTACGTTCCGCTTGCTTTGTCTTTCCAGTCTTGTTGA ATGCCTGAGAAGAAGAAAATGAAGGTAAAGAAAGGATGGTTAGCTGTGGAAGTAGGGTTGCTAGAGGAAGATGGAAGAATAGAACGATTTGTGGTTCCGATATCCTACTTACATCACCCTCTTTTCAAGAACCTCTTGGACAAAGCTCAAGAAGTCTATGGCTACCATGCCAATGGCCCTCTTCGACTTCCGTGCTCGGTCGACGACTTTCTCCAACTTCGATGGCAGATTGAGAAAGAATCCGACCAAAACAACGACAAACAAAACCACCAGAACCATCGCCATCGTCATTACCCTTACCACTATTACGTTCCGCTTGCTTTGTCTTTCCAGTCTTGTTGA ATGCCTGAGAAGAAGAAAATGAAGGTAAAGAAAGGATGGTTAGCTGTGGAAGTAGGGTTGCTAGAGGAAGATGGAAGAATAGAACGATTTGTGGTTCCGATATCCTACTTACATCACCCTCTTTTCAAGAACCTCTTGGACAAAGCTCAAGAAGTCTATGGCTACCATGCCAATGGCCCTCTTCGACTTCCGTGCTCGGTCGACGACTTTCTCCAACTTCGATGGCAGATTGAGAAAGAATCCGACCAAAACAACGACAAACAAAACCACCAGAACCATCGCCATCGTCATTACCCTTACCACTATTACGTTCCGCTTGCTTTGTCTTTCCAGTCTTGTTGA MPEKKKMKVKKGWLAVEVGLLEEDGRIERFVVPISYLHHPLFKNLLDKAQEVYGYHANGPLRLPCSVDDFLQLRWQIEKESDQNNDKQNHQNHRHRHYPYHYYVPLALSFQSC Homology
BLAST of CmaCh03G001040 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 9.1e-11 Identity = 39/104 (37.50%), Postives = 61/104 (58.65%), Query Frame = 0
BLAST of CmaCh03G001040 vs. ExPASy Swiss-Prot
Match: P33083 (Auxin-induced protein 6B OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 5.9e-10 Identity = 33/67 (49.25%), Postives = 47/67 (70.15%), Query Frame = 0
BLAST of CmaCh03G001040 vs. ExPASy Swiss-Prot
Match: P33080 (Auxin-induced protein X10A OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 2.2e-09 Identity = 30/68 (44.12%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of CmaCh03G001040 vs. ExPASy Swiss-Prot
Match: Q41220 (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana OX=3702 GN=SAUR15 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.1e-08 Identity = 31/76 (40.79%), Postives = 48/76 (63.16%), Query Frame = 0
BLAST of CmaCh03G001040 vs. ExPASy Swiss-Prot
Match: P33079 (Auxin-induced protein 10A5 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.5e-08 Identity = 29/70 (41.43%), Postives = 45/70 (64.29%), Query Frame = 0
BLAST of CmaCh03G001040 vs. ExPASy TrEMBL
Match: A0A0A0L2M8 (SAUR family protein OS=Cucumis sativus OX=3659 GN=Csa_4G556180 PE=3 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 4.2e-51 Identity = 98/113 (86.73%), Postives = 107/113 (94.69%), Query Frame = 0
BLAST of CmaCh03G001040 vs. ExPASy TrEMBL
Match: A0A6J1DN07 (auxin-responsive protein SAUR32-like OS=Momordica charantia OX=3673 GN=LOC111022073 PE=3 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 8.5e-44 Identity = 94/114 (82.46%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of CmaCh03G001040 vs. ExPASy TrEMBL
Match: A0A7N2MR82 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 157.1 bits (396), Expect = 4.2e-35 Identity = 75/113 (66.37%), Postives = 87/113 (76.99%), Query Frame = 0
BLAST of CmaCh03G001040 vs. ExPASy TrEMBL
Match: A0A2I4DN05 (auxin-induced protein 6B-like OS=Juglans regia OX=51240 GN=LOC108981711 PE=3 SV=1) HSP 1 Score: 156.0 bits (393), Expect = 9.4e-35 Identity = 74/113 (65.49%), Postives = 85/113 (75.22%), Query Frame = 0
BLAST of CmaCh03G001040 vs. ExPASy TrEMBL
Match: A0A7J0EXZ6 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_07g0015060 PE=3 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 1.6e-34 Identity = 73/113 (64.60%), Postives = 87/113 (76.99%), Query Frame = 0
BLAST of CmaCh03G001040 vs. NCBI nr
Match: KAG6603262.1 (Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 236.5 bits (602), Expect = 1.1e-58 Identity = 110/113 (97.35%), Postives = 112/113 (99.12%), Query Frame = 0
BLAST of CmaCh03G001040 vs. NCBI nr
Match: KAG6603263.1 (Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 234.2 bits (596), Expect = 5.6e-58 Identity = 110/113 (97.35%), Postives = 111/113 (98.23%), Query Frame = 0
BLAST of CmaCh03G001040 vs. NCBI nr
Match: KGN54862.1 (hypothetical protein Csa_012431 [Cucumis sativus]) HSP 1 Score: 210.3 bits (534), Expect = 8.6e-51 Identity = 98/113 (86.73%), Postives = 107/113 (94.69%), Query Frame = 0
BLAST of CmaCh03G001040 vs. NCBI nr
Match: XP_022154927.1 (auxin-responsive protein SAUR32-like [Momordica charantia]) HSP 1 Score: 186.0 bits (471), Expect = 1.7e-43 Identity = 94/114 (82.46%), Postives = 103/114 (90.35%), Query Frame = 0
BLAST of CmaCh03G001040 vs. NCBI nr
Match: KAF3972041.1 (hypothetical protein CMV_004413 [Castanea mollissima]) HSP 1 Score: 157.1 bits (396), Expect = 8.7e-35 Identity = 75/113 (66.37%), Postives = 87/113 (76.99%), Query Frame = 0
BLAST of CmaCh03G001040 vs. TAIR 10
Match: AT5G53590.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 76.3 bits (186), Expect = 1.8e-14 Identity = 34/93 (36.56%), Postives = 61/93 (65.59%), Query Frame = 0
BLAST of CmaCh03G001040 vs. TAIR 10
Match: AT4G00880.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 72.8 bits (177), Expect = 2.0e-13 Identity = 37/92 (40.22%), Postives = 58/92 (63.04%), Query Frame = 0
BLAST of CmaCh03G001040 vs. TAIR 10
Match: AT3G61900.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 68.6 bits (166), Expect = 3.8e-12 Identity = 33/78 (42.31%), Postives = 50/78 (64.10%), Query Frame = 0
BLAST of CmaCh03G001040 vs. TAIR 10
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 67.8 bits (164), Expect = 6.5e-12 Identity = 39/104 (37.50%), Postives = 61/104 (58.65%), Query Frame = 0
BLAST of CmaCh03G001040 vs. TAIR 10
Match: AT4G22620.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 65.1 bits (157), Expect = 4.2e-11 Identity = 33/75 (44.00%), Postives = 46/75 (61.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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