CmaCh03G000920 (gene) Cucurbita maxima (Rimu) v1.1

Overview
NameCmaCh03G000920
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description40S ribosomal protein S25
LocationCma_Chr03: 907056 .. 910304 (+)
RNA-Seq ExpressionCmaCh03G000920
SyntenyCmaCh03G000920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTATTTTCCTCTGGTTTGAGCTCTCCAGCTAGAGTTCTTCGCCTCTGTAATCAACGTTCTGCGTAGTCTTCCAACCAGATTCTCAGCGGCTGACCCCTCAACATGGTATGTTATTGCTTCAAAATCCTACAAATTATCTTCTTTTGCCTTGTATTACTTCATTTTTCTTACGGAATCGAGTAAGGCTGGTGTAGAATCATCTTGCGATGTGCTGCAATTTTTCTACATTGTCATTCTGTAGTTTAAGCTATGCTAGATCACTGGGTATTTGTCTGGTTTTGTGAAAATTTGCGACGTAAGTCATTGTCGGAGTTCGTCGTTCTATTGTATTGTTATTTACTGGAAAACAAAGCAGAATAGACACATTAGGTTTGCGATATGATTGTTGTGTGTTTGTGTAATGATTTAAGACGATTTATCTGTTTCAATTTTCTATTCATAAGGTCCAATGGTAAAATTACAAGTAATGTTTTTACTTAGTGTGGAACAGTTGGGAAGTTCTAAGTGTTTATCTGATTTATGAACACAAGTGATGTAAATTTTCTCCTACTTGGTATCCATCTGGCAGGCACCGAAGAAGGATAAGGCTCCTCCTCCGTCCTCCAAGCCTGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGGTAATTTGTTTTGTGAGGACTGCTTTGTTTTTAATGTTTAGGCCCGTTGATAACCATTTAATTTTTGGTTTTTGAAAATTAAGCTCATAAACTCTACTTCCACCCATAAAACAATTTGTTTTTAAATATGTTTTTCAAAATCTAAGCCAAAATTTGCAAAGCTAAAAAACTTAAGGGCCTGTTTGATAACACCATTGTATAAACATTTTAGAGATGTTTTCAAAATCTAAGTCAAGTTTTGAAAGCTGAAGAAGTAGTTCTTATAAACTTGTTTTTGTTTTGGAATTTAGTTATGAATTCAAAATGTTTCTCATGAATGATGATGAAAACCTTTGAAATAAATTATAAGAAAATTAGCCCATTTTTCAAAAACTAAAAATAAAAAATCAAAATGGTTATCAAACTAGATCATCGTATTTTAAAAGCTTGTTTTCTTTTCTTGGAATTTGACATTCGAGTGTTTCTTCAAGAAGTGTGAAATCAAAGTAAAGAAATGGTAAGGAAATAAACACAATTTTTTAAACCGTTATCAAATGAGACCATAGTCATTAGGGCTAGTGAGTATTCAGGTACATCTTTCTTTCAGGCCTGTTACTGGTTAGGATGTTTTTTTTTTTTTTTTTTTTTTTTTGCAAATCTTACTTTTGGTTCTGTTATTTTATTTCTTGTGATGTTTATTGCACAGAAATGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTATTGTTTGATCAGGGAAGCTATGACAAGCTTCTTTCAGAAGTTCCAAAATACAAGCTTATTACTCCTTCCATCCTTTCAGACAGATTAAGGGTATGGCTTGCTCAATCCCATTTAGCTTGTATCTTCACATGTTGTAAATGCATGTCTTTTGATTGTTGAATATGGACCATGCATCTTAATGTTAGTTTGAAATTTGTGTCCCCTACAATACTTCTCTCTTCAATTAGTTTTTTTAATAAGACCTGTGAGATCTCATATCGATTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTTGAAACCTCTCCCTAGCAGACGTGTTTCAAAAACCTTGAGGGGAAACCCAAAGAGGACAATATCTGTTAGTGGTGGGCTTGGTCCGTTACAAATGGTATCAAAGTCAGACATTGGGTGATGTGCCAGCAAGGAAGCTGTTCCTCGAAGGGGGTGGACACTAGGCGATGTGCTTGCAAGGACGCTGGGCCCCGAAGGAGGGGGACTCTGAGATCCCACATTGATTGGGGAGGAAAACGAAACATTCTTTATAAGGATGTGGAAATCTCTCCCTAGTAGACACGTTTTAAAAACTTTGAGGAGAAGCCTAAAAAGGAAAGCCCAAAGAGGAAAATATCTGCTAGTTGTTAGCTTCTGCGGTTACAAAACCAATCCCCACTATCCACTAAAAACGGAATGGAAAAGAAGTTGGGGGCAGATGATCATACATTGAGCTTTTTTTTTTTTGGTCTGCTTTTATGAATTCCAATGTATGATTATCACATCCAAGTCAAAGACTTCTTGTACTATAATGTTATAGATCAACCTTTATTTGTTAAATCTTCATTTAAGTAAGCATGTAATCGTGTTTCTATCCGTTTCTAAAAACATAATCGGACTCATTCGAGCGATGATTGAAATTATAGTTGCATTGTATTACACTTTCATAATTTCTGTCTTCTGTTTTCTCATACCATATTCCAAATGTGTCATTTATTTGAGATGTTGCACTAGTCCCATGTTTAAACTACATATCCATATGGGTAACACAATTACAAAGTGATCTCTGTTGGTTTGATTTCATGACAGCAAGGTGTTGTATTGTGTACGTTATTAATCCATGTGTATAAGAAATTATTCTTAAACCATAAGAGTTGGGTATCTTTTGTAACTATCCCTTGATGTGAAGTATCTGATATCTCTAGTCAATATAAAGTGCCAAATGTCCTCCATATGACCCGTTTTTTAGACGTATTCGTTTGGTTAGCATGTCATTCATGTAATCAAACCGAACTGTAGCTGGTTCTACTTGGATGGATCGTTGTCGAGATGGTAAATTGCTAAAAAAATTTCTCTGTTCGTTGTTCATTACTGTTCATCAGATCAATGGATCGTTGGCTCGTCGGGCAATAAAGGATTTAATGGCGAGAGGCTCTATTAGGCTCGTATCTGCTCATGCTAGCCAGCTAATATACACTAGAGCCACAAACACATGATCAAAGCGTTGGCGTTGGAAAGAGGAACATCTTGTTATTTTTGTGAGCTTCCTATCAAGAACTCTCTATGCTTTTGTATCTTCTGCATTCATGGAACGCATGCTGCTGTGAAAACTTCTTGAATTATTTGCACTGCTTACTTTCTTATCTATGGATTAACATTTCCTCCTGTCCTGAGTTTCTCTGAAACTAGACAGACATCCTATCGTGATCCTTCATTGATTGGTTATTCCTCCCCGTTCTTTCTCTTTTTTCAAATGCGGTATTGTTTAGTTTACAAGATTTAATGACTTTGATTTTGTATTAATACAATACCTATCTTTACTTCACCGGCATCACATTCTATTTAGGTAAGACAAGTAATCTAGTTCGGGATATTTTTCA

mRNA sequence

TGTATTTTCCTCTGGTTTGAGCTCTCCAGCTAGAGTTCTTCGCCTCTGTAATCAACGTTCTGCGTAGTCTTCCAACCAGATTCTCAGCGGCTGACCCCTCAACATGGCACCGAAGAAGGATAAGGCTCCTCCTCCGTCCTCCAAGCCTGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTATTGTTTGATCAGGGAAGCTATGACAAGCTTCTTTCAGAAGTTCCAAAATACAAGCTTATTACTCCTTCCATCCTTTCAGACAGATTAAGGATCAATGGATCGTTGGCTCGTCGGGCAATAAAGGATTTAATGGCGAGAGGCTCTATTAGGCTCGTATCTGCTCATGCTAGCCAGCTAATATACACTAGAGCCACAAACACATGATCAAAGCGTTGGCGTTGGAAAGAGGAACATCTTGTTATTTTTGTGAGCTTCCTATCAAGAACTCTCTATGCTTTTGTATCTTCTGCATTCATGGAACGCATGCTGCTGTGAAAACTTCTTGAATTATTTGCACTGCTTACTTTCTTATCTATGGATTAACATTTCCTCCTGTCCTGAGTTTCTCTGAAACTAGACAGACATCCTATCGTGATCCTTCATTGATTGGTTATTCCTCCCCGTTCTTTCTCTTTTTTCAAATGCGGTATTGTTTAGTTTACAAGATTTAATGACTTTGATTTTGTATTAATACAATACCTATCTTTACTTCACCGGCATCACATTCTATTTAGGTAAGACAAGTAATCTAGTTCGGGATATTTTTCA

Coding sequence (CDS)

ATGGCACCGAAGAAGGATAAGGCTCCTCCTCCGTCCTCCAAGCCTGCTAAATCTGGCGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAGCAAAAGGAGAAGGTGAACAACATGGTATTGTTTGATCAGGGAAGCTATGACAAGCTTCTTTCAGAAGTTCCAAAATACAAGCTTATTACTCCTTCCATCCTTTCAGACAGATTAAGGATCAATGGATCGTTGGCTCGTCGGGCAATAAAGGATTTAATGGCGAGAGGCTCTATTAGGCTCGTATCTGCTCATGCTAGCCAGCTAATATACACTAGAGCCACAAACACATGA

Protein sequence

MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKLITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT
Homology
[Close]
BLAST of CmaCh03G000920 vs. ExPASy Swiss-Prot
Match: Q9SIK2 (40S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 3.2e-45
Identity = 95/108 (87.96%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDR+RINGSLARRAI++LMA+G IR+VSAH+SQ IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]
BLAST of CmaCh03G000920 vs. ExPASy Swiss-Prot
Match: P46301 (40S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 5.4e-45
Identity = 96/108 (88.89%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+ +YDKLLSE PKYKL
Sbjct: 1   MAPKKAQAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDKSTYDKLLSEAPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPS+LSDRLRI+GSLAR+AI+DLMARGSIR+VSAHASQ IYTRATNT
Sbjct: 61  ITPSVLSDRLRISGSLARKAIRDLMARGSIRMVSAHASQQIYTRATNT 108

[Close]
BLAST of CmaCh03G000920 vs. ExPASy Swiss-Prot
Match: Q8GYL5 (40S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2)

HSP 1 Score: 179.5 bits (454), Expect = 2.0e-44
Identity = 94/107 (87.85%), Postives = 103/107 (96.26%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ +YDKLLSE PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATN 108
           ITPSILSDRLRINGSLARRAI++LMA+G+IR+VSAH+SQ IYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]
BLAST of CmaCh03G000920 vs. ExPASy Swiss-Prot
Match: Q9T029 (40S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 3.5e-44
Identity = 93/108 (86.11%), Postives = 103/108 (95.37%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ +YDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDR+RINGSLARRAI++LMA+G IR+V+AH+SQ IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]
BLAST of CmaCh03G000920 vs. ExPASy Swiss-Prot
Match: Q9SIW5 (40S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3)

HSP 1 Score: 172.2 bits (435), Expect = 3.3e-42
Identity = 90/106 (84.91%), Postives = 99/106 (93.40%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ +YDKL+SE PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRAT 107
           ITPSILSDRLRINGSLAR+AI+DLM +G+IR+VS H+SQ I TRAT
Sbjct: 61  ITPSILSDRLRINGSLARKAIRDLMVKGTIRMVSTHSSQQINTRAT 106

[Close]
BLAST of CmaCh03G000920 vs. ExPASy TrEMBL
Match: A0A6J1HY46 (40S ribosomal protein S25 OS=Cucurbita maxima OX=3661 GN=LOC111467295 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.1e-48
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 108

[Close]
BLAST of CmaCh03G000920 vs. ExPASy TrEMBL
Match: A0A6J1EKT2 (40S ribosomal protein S25 OS=Cucurbita moschata OX=3662 GN=LOC111435474 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 4.1e-48
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 108

[Close]
BLAST of CmaCh03G000920 vs. ExPASy TrEMBL
Match: A0A498IJ67 (40S ribosomal protein S25 OS=Malus domestica OX=3750 GN=DVH24_005659 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.3e-46
Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDRLRINGSLARRAIKDLMARGSIRL++AHASQ IYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLIAAHASQQIYTRATNT 108

[Close]
BLAST of CmaCh03G000920 vs. ExPASy TrEMBL
Match: A0A5N5H9J7 (40S ribosomal protein S25 OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_040484 PE=3 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.3e-46
Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDRLRINGSLARRAIKDLMARGSIRL++AHASQ IYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLIAAHASQQIYTRATNT 108

[Close]
BLAST of CmaCh03G000920 vs. ExPASy TrEMBL
Match: A0A5B7BSZ6 (40S ribosomal protein S25 OS=Davidia involucrata OX=16924 GN=Din_041531 PE=3 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 2.3e-46
Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSEVPKYKL
Sbjct: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDRLRINGSLARRAIKDLMARGSIR+VSAHASQ IYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRMVSAHASQQIYTRATNT 108

[Close]
BLAST of CmaCh03G000920 vs. NCBI nr
Match: XP_022928621.1 (40S ribosomal protein S25-like [Cucurbita moschata] >XP_022967929.1 40S ribosomal protein S25 [Cucurbita maxima] >XP_023543611.1 40S ribosomal protein S25-like [Cucurbita pepo subsp. pepo] >KAG6603251.1 40S ribosomal protein S25-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 200.3 bits (508), Expect = 8.5e-48
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 108

[Close]
BLAST of CmaCh03G000920 vs. NCBI nr
Match: XP_008391134.1 (40S ribosomal protein S25-like [Malus domestica] >XP_028955746.1 40S ribosomal protein S25-like [Malus domestica] >KAB2619834.1 40S ribosomal protein S25-like [Pyrus ussuriensis x Pyrus communis] >RXH83406.1 hypothetical protein DVH24_005659 [Malus domestica] >RXI04825.1 hypothetical protein DVH24_039099 [Malus domestica] >RXI09942.1 hypothetical protein DVH24_018971 [Malus domestica])

HSP 1 Score: 195.3 bits (495), Expect = 2.7e-46
Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDRLRINGSLARRAIKDLMARGSIRL++AHASQ IYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLIAAHASQQIYTRATNT 108

[Close]
BLAST of CmaCh03G000920 vs. NCBI nr
Match: XP_008456601.1 (PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo] >XP_022134525.1 40S ribosomal protein S25-2-like [Momordica charantia] >TYK11764.1 40S ribosomal protein S25-2-like [Cucumis melo var. makuwa])

HSP 1 Score: 194.1 bits (492), Expect = 6.1e-46
Identity = 102/108 (94.44%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           +TPSILSDRLRINGSLARRAIKDLMARGSIR++SAH+SQ IYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRATNT 108

[Close]
BLAST of CmaCh03G000920 vs. NCBI nr
Match: KAG9440264.1 (hypothetical protein H6P81_020429 [Aristolochia fimbriata])

HSP 1 Score: 194.1 bits (492), Expect = 6.1e-46
Identity = 104/108 (96.30%), Postives = 107/108 (99.07%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKK+KAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSEVPKYKL
Sbjct: 1   MAPKKEKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDRLRINGSLARRAIKDLM+RGSIRLVSAHASQ IYTRATNT
Sbjct: 61  ITPSILSDRLRINGSLARRAIKDLMSRGSIRLVSAHASQQIYTRATNT 108

[Close]
BLAST of CmaCh03G000920 vs. NCBI nr
Match: XP_038885543.1 (40S ribosomal protein S25 [Benincasa hispida])

HSP 1 Score: 193.4 bits (490), Expect = 1.0e-45
Identity = 102/108 (94.44%), Postives = 106/108 (98.15%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLLSEVPKYKL
Sbjct: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLSEVPKYKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           +TPSILSDRLRINGSLARRAIKDLMARGSIR++SAH SQ IYTRATNT
Sbjct: 61  VTPSILSDRLRINGSLARRAIKDLMARGSIRMISAHPSQQIYTRATNT 108

[Close]
BLAST of CmaCh03G000920 vs. TAIR 10
Match: AT2G21580.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 182.2 bits (461), Expect = 2.2e-46
Identity = 95/108 (87.96%), Postives = 104/108 (96.30%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQG+YDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDR+RINGSLARRAI++LMA+G IR+VSAH+SQ IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108

[Close]
BLAST of CmaCh03G000920 vs. TAIR 10
Match: AT4G34555.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 179.5 bits (454), Expect = 1.5e-45
Identity = 94/107 (87.85%), Postives = 103/107 (96.26%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ +YDKLLSE PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATN 108
           ITPSILSDRLRINGSLARRAI++LMA+G+IR+VSAH+SQ IYTRAT+
Sbjct: 61  ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107

[Close]
BLAST of CmaCh03G000920 vs. TAIR 10
Match: AT4G39200.1 (Ribosomal protein S25 family protein )

HSP 1 Score: 178.7 bits (452), Expect = 2.5e-45
Identity = 93/108 (86.11%), Postives = 103/108 (95.37%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ +YDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDR+RINGSLARRAI++LMA+G IR+V+AH+SQ IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108

[Close]
BLAST of CmaCh03G000920 vs. TAIR 10
Match: AT2G21580.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 176.4 bits (446), Expect = 1.2e-44
Identity = 94/108 (87.04%), Postives = 103/108 (95.37%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQG+YDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDR+RINGSLARRAI++LMA+G IR+VSAH+SQ IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 107

[Close]
BLAST of CmaCh03G000920 vs. TAIR 10
Match: AT4G39200.2 (Ribosomal protein S25 family protein )

HSP 1 Score: 172.9 bits (437), Expect = 1.4e-43
Identity = 92/108 (85.19%), Postives = 102/108 (94.44%), Query Frame = 0 

Query: 1   MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGSYDKLLSEVPKYKL 60
           MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ +YDKLL+E PK+KL
Sbjct: 1   MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60

Query: 61  ITPSILSDRLRINGSLARRAIKDLMARGSIRLVSAHASQLIYTRATNT 109
           ITPSILSDR+RINGSLARRAI++LMA+G IR+V+AH+SQ IYTRATNT
Sbjct: 61  ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 107

The following BLAST results are available for this feature:
BLAST of CmaCh03G000920 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SIK23.2e-4587.9640S ribosomal protein S25-2 OS=Arabidopsis thaliana OX=3702 GN=RPS25B PE=3 SV=1[more]
P463015.4e-4588.8940S ribosomal protein S25 OS=Solanum lycopersicum OX=4081 GN=RPS25 PE=3 SV=1[more]
Q8GYL52.0e-4487.8540S ribosomal protein S25-3 OS=Arabidopsis thaliana OX=3702 GN=RPS25D PE=3 SV=2[more]
Q9T0293.5e-4486.1140S ribosomal protein S25-4 OS=Arabidopsis thaliana OX=3702 GN=RPS25E PE=3 SV=1[more]
Q9SIW53.3e-4284.9140S ribosomal protein S25-1 OS=Arabidopsis thaliana OX=3702 GN=RPS25A PE=3 SV=3[more]
BLAST of CmaCh03G000920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1HY464.1e-48100.0040S ribosomal protein S25 OS=Cucurbita maxima OX=3661 GN=LOC111467295 PE=3 SV=1[more]
A0A6J1EKT24.1e-48100.0040S ribosomal protein S25 OS=Cucurbita moschata OX=3662 GN=LOC111435474 PE=3 SV=... [more]
A0A498IJ671.3e-4696.3040S ribosomal protein S25 OS=Malus domestica OX=3750 GN=DVH24_005659 PE=3 SV=1[more]
A0A5N5H9J71.3e-4696.3040S ribosomal protein S25 OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8... [more]
A0A5B7BSZ62.3e-4696.3040S ribosomal protein S25 OS=Davidia involucrata OX=16924 GN=Din_041531 PE=3 SV=... [more]
BLAST of CmaCh03G000920 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022928621.18.5e-48100.0040S ribosomal protein S25-like [Cucurbita moschata] >XP_022967929.1 40S ribosoma... [more]
XP_008391134.12.7e-4696.3040S ribosomal protein S25-like [Malus domestica] >XP_028955746.1 40S ribosomal p... [more]
XP_008456601.16.1e-4694.44PREDICTED: 40S ribosomal protein S25-2-like [Cucumis melo] >XP_022134525.1 40S r... [more]
KAG9440264.16.1e-4696.30hypothetical protein H6P81_020429 [Aristolochia fimbriata][more]
XP_038885543.11.0e-4594.4440S ribosomal protein S25 [Benincasa hispida][more]
BLAST of CmaCh03G000920 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G21580.12.2e-4687.96Ribosomal protein S25 family protein [more]
AT4G34555.11.5e-4587.85Ribosomal protein S25 family protein [more]
AT4G39200.12.5e-4586.11Ribosomal protein S25 family protein [more]
AT2G21580.21.2e-4487.04Ribosomal protein S25 family protein [more]
AT4G39200.21.4e-4385.19Ribosomal protein S25 family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004977Ribosomal protein S25PFAMPF03297Ribosomal_S25coord: 7..105
e-value: 1.6E-41
score: 140.6
IPR004977Ribosomal protein S25PANTHERPTHR1285040S RIBOSOMAL PROTEIN S25coord: 2..108
NoneNo IPR availableGENE3D3.30.63.20coord: 21..108
e-value: 2.3E-40
score: 138.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availablePANTHERPTHR12850:SF31BNAA04G12260D PROTEINcoord: 2..108

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh03G000920.1CmaCh03G000920.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0022627 cytosolic small ribosomal subunit
molecular_function GO:0003735 structural constituent of ribosome