CmaCh03G000290 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh03G000290
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	zinc finger CCCH domain-containing protein 14-like
Location	Cma_Chr03: 283917 .. 290092 (-)
RNA-Seq Expression	CmaCh03G000290
Synteny	CmaCh03G000290

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCCATCTCTCTAATTTTCTCCATAGCTTTTAAGAAACCTCGATTTCCTTCCCCGCCATAACTCTCCGACTCCACACTTAGGGTTTTCTTCTTCTTCTTCTTCTTCTTCCTCCAATTATTCTTGCGTTCTCTCTGATCTCTGCAACTCTTGTTCCACTGCTTGCTTTCTTTCTCGATTTACTTTCTCGATCTCGATCTGTACTTCCTTACAATGGATATGCGCAAGCGAGGGAGGCCTGAAGCTGCCTTCAATTCTAATGGTTCCTTTAAGAAGCATAAGCAAGGTTCGTTTTTTTTGTTTTTTGTTTTTTGTTTTGTTTTATTTTCTGTTTTTGGGATTGTGTTCGTTGTTCTGTTTGTTGGAGTGGTAGTTCGATGCTTTGTCTCGTTCGTTTGTACCACTAGTTTGAGCTTTATCTGGTTGCTTATATCTGGGAGGAGAGAACATTTATGTGCTTAGCTAGTGCTTTGCTTTGTTCGTTGTTGGGGGAGGATGGTTTTTTTGGCCTCTGTTTGTTATTCGTTTCTTTTCTGAAGTTGGAACTTTTCGCTTTTACTGTCTCACTGGTTCTTCTTTTATTTGTTTCTACGGATTTTTTAGTTAGTGGCGCCACGTGTTCGAGCTCCGTGATCTACCCGTATATATGCGTTTGATCCAATGTCATTTTACTATACTTCTTCAATTAGGGATAACTGGCATACTCCTTTAGTAAGTGCATCTGCTTTAAGTAATTGAAGACGGTTGTTGTTTGTAGGTTATGAGAGGGGTTAGATATAACTAGTGGCGTAATAGGAGGGTTAGTAATTGGACGACTTTTAAAATTGTGCCTGTTAGTGGTGAGATGTGGGACCATGTGAGGGTTTGTCTCCATTGTCATCCTTCAGCAAAGTGTGCGTAGGGTTCAATAATCGAATTACAAGTATGGTGGAGCGTGGAGCCTGCCCTTTTCTTGTTTTCCATCACTTCTGTGTTTTTCATCAACATTCTCAACAGACCATGGTTTGGTCTCTCTCCACTTTTAACACCTCAGAGTCGGTCATTATTGCTTCATCCAGTAGTATGTTGAGAATGTTGATGAAAAGCAAAGAATTGGGAAAGAATATCTCTAGTTGAGTGCCTCTTATTTCAACTATTCTCCTTGGACTAGAATCTAGAATTGGCAATGCAGATTTGAATCCAATTTTTTTCCATTTATTATGAACTTGAAATTGTCGTAAAAAAATTCCAATCAGTTTGATCCCTCCTTTTGTTTTATTTAATGTTCTGCCTTGATCCACTTGGCTACATCCGCCCCTACCCCCGCACAGGTTTAAGCATCGAGTTTTTTATTCTTTATTCTTGATTACAACTTTCGAGTCTTATATTATGGAAAAACCCTTGGTTTTTAAAGCTCTAGGATTGTTGTAACTCAGAAGTACTGGTCACCATCCATCAAAGTCGCTAGTTACCCTGTCATTAGGTGACTAGCTCCTCAGCCTTCCAGCATATTTGAGTTGTATACACTTTGAAGGGAATATGGGTTGAATATGGAAAAGATCTATTTAAAAAATTATGACTTTAAGAACAATTCCTGAATATCTTGTTCATTTGCTGCAATATTTTTTCTTTGAGCGATGAGTGAGGGAAACAATTGTTTGCATCATATTTATTTATGGAAAAGGTACTCTTTGGATCAAGAAAAAAAAAAATTGTTCTCGGAATAATTTTATTTTATCCTTAGGTCAGTCATTAAGCTTGGAGTGGAGGGTTAAAATGCTTCATCTACCATTGACAAAATTTGGATCTAGGTGGTTTTTTTTTTGTTTGTTAAAAAAAAAAACTTTGTTTTGGTGTTGGGCCTTATTGTATATATAAACCTAGGTAACCCCACAATTCAACTGAAACAGTTGAAGTTACCAATCATATATTTAGATTGTTACCCTACAGTAACAGAAAGCTACAAATTATTTAGTAATTGTTTTAGTTGCCTAAATAATTTAAGTGTGAAGATGTATTAAAGTATTAGAGTAAAAATCTTAACAAACTGTAACTGAGAAAGAATAATTAATGTTTTGCAACAGAACTGGAGTCCTTATCAACTGTAGGGGGCAAATCGAAGCCATGCACCAAGTTTTTCAGGTTCATATCTTACCTACCTAAATAAGTATTTAAGCTGCATATTATCTCTCCCTAATCATCTAAACTTGTTGTAAGAATTTAATTGATCATGAATTACAAGATAAAGCTGAGTAATTGCGCCTCTAAAAACTGGGAATACAGGTATAAATTATTACTCTAAGCCTTCAACCAAGTCAATAAAATTTTAAAACTAAACCTATTAATGAATTATAGTAAGTTAAAATTTTTCTCAGTTACTACAAAACACAGGCTCTCTCTCTCTGTTTCATTTATATTTTGCACTGCACGTGGGATACAATCTCATTCTCATTGGTTACAAATTAGTTTGATCTGTTCTTTTTTTTATTTTTAATTTTGGTCGATTATTATTCCCTTTTGATCCAGTTCTATTTTACTAGCTTGCGTCCATCATTTATCTTTGTAATGAGGTTTTGAGCCCTAATTTTTTTTGTCTACACATCTCTTATCTGAATAGAGATGACTTACCTTCCTTTTCCTTGTGAATCTCTCCACTTAGTAATAGAAATGCCCCAGTCAAAAAAAAAAAGAGAGAGAGTAGAGAGAAATATGGTCAGCATCTAACCTTTAAGCAAAAATTGTTTTTTAATAAAAGAAGAATAGAGGAAAAAATCAATTTTGTACCCCTATACTTCGAGGCTTGTATCAAATAAAACTCCAGAGCAATAATTGTATAAATTTGAATCCTAAACTTTCATAAGTGAATCAATGTAGACCCTATATTAGTGAGTTATAACAATTTTAACTTAATTTCATTTCAAATCAACTCATAGTTGGGTAAATATAATTCTTCTTCCAAAAGTCTGCTAAAATAGTAGGAAAACGTATCACAGAATTCTTTCTTAATAAGTAAAGAAAAATAGAGGAAGAAGAAAAGATGGAACCACTCATAAATAGTGAGAGTTGCTACTATCCATTTGATTTCTCTCTATTAATGTCATATACATGTGTGAGAATTATGCATTAAAGGTCTTAAAATAGAATCCTAATGAAGGGTCTAAATTGATTCACTTGAAAGTTTAGATTTTCATTGATATAATTATTAGTTTGAGGATTTAATTGATACAACTCTAAAATTTGGAGGTGTAATTTGATTTTTATTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAGAAAAAAGAAAAGTTATTACAGTTGCCTTTGCATCGTTTTTCCTTCTAGCAGCTAATTCAACTAGAGCATGCCATTTGCTTCAATTTTTAGTACCTCTATTTAATATTCTTCAGTATATTGATGGCTTGTAGAAATATGGGTAGAAAGTATGGGTGGAGGGATTGAGGCTTAAAAGTATTTTGTGATCTGTGTTCCAATTTGCCACTTTGTATTCCATCGATGTTTGAGTTGTTTGTTATCAGCTGTGAGTTTTCTAGTATTAATGGATCATGCTGATGGATTTTCCTTATCTTTGTATTTGTTGGCAATTCATGTCTTTCAATCTCTTTTTTTTCGTCGCCATAAATCATTGTAAGTGTGCATCTTTATTCTTTTTAAAAGGACACAGGCCTCTATTTTTTCTTGTCCCAGTAACAATTGATTTTCTAATTGTTTGTGACGATCTACTAAGTGCCTATAGTTTTGAATTTCTTGAATGGATTAGACCACTTACCAATAGATTTATTGTCTGCTTATCTCGTGAAAAGTGTTAAGTTTTCATATCTTTCTCCCAAGATTTCAACTCATGTCTGAAATAGATTTTCTTGTAGGGCAATAATCAGCCATAAGAGCTTCCTATTCACTCTCCTGATTGCATTGTGTTTAATCTTTTATCAAGATGTGAAGATTTAGTTTGAGTTATTTGATTTGCTTAAGCTTCTCTTTGAGGTGTGGCAATTTGATTTGGTTACTTGATATGCTTTTTTAAACGCTTGCTAACCTTATACTTGATACACGGGGTCCTACTTAAGATACTAGGTTGAACGTTTAAAAATAGTTTTCTGTTACCAAGTATAATTTTTTTTTTTTTTAATATGGATAACCTGTTTGGCAGGATAAATTTTCATCAGAATAAAAAACGGTAGAAACTAGAAATGAAAAAGAACAGAAAATAGTTTTATACTATTGATTTAGAAAACAGTTTCTAAAGTAATATGTAGTCTAATGTTGGGACTGATTGGAAGCTGTTTCTAAAAGATGAAGTCTTGTTTCCAAAAATGAAAAGAATTAACTGTGCTTTTAAGTTTCAAACGTTGGTGGTGGTGGGTTTTTTACTTTCATTTCTAAGCTAATTCTTAAAAATAATTTTGATCTTATAATAAAATAAAAATTATTTTGGTAGCACGGTGAGGGAGTAAACTGTTCCGATAGAAAAAAAAGGATGGGATCTTTTAGCACTAACAAGGAGTTGGGGCTTGATGGGAGGTTGGTTGACAGATTTGGTACTTGTCACCCCAAAGGGGAGAAAAACTGCTAAAGGTTGCCAAGTTAATTGCAAAAGACAAAAAAGGTCTTTGTGAAGAAGCTCGAGTATTCTTTCTATTTGCAACTTCGTTTCTAGTGGGGCTGCATTTTACAAAAAGGCTGTTTATAGTTTCTTTTTCCAGTAGAGTAGATCTTTGTTTTATTTGTTTCGTTCTAAAGTTTCTTTCTATACTGAAGGGAGCCATTTTTCAAAACTTCCTGAAATATCTCAGAAAATTTTTATGCTATTTCTCAATAACATACAACTTCTGGAGGAGTTTGAACATTTAGAAAGAGGAAAACATGATATTACTTTATTCAAAAGATATGCATGCGGTTCTTGCGGAGATTGATTGCTCCTATTTGTATGCTGGAGTTTGATTTCTCCGAGTGAATACTAATCTTTAGATTTATGAATTTCCGAGGGATTCTGGTTCGGAGGTTTGGTTGATCTAATAGTGTTGTGTTCATCTTTTTGGATTTCAGCACTGCTGGTTGCCCATTTGGTGAAAGCTGCCACTTTTTGCATTACGTTCCTGGTGGTTATAATGCTGTTGCTCAAATGATGAATCTTGCTCCTGTTGGTTCTCAACCATCCAGAAATATGGCTGCCCCTCCTGTCTCCAATGGCGGGTCCTCTGCTCCGTCCCAAATCAAAACTCGCATGTGTAACAAGTTCAACAGCGCTGAAGGCTGCAAGTTCGGTGATAAATGTAACTTTGCCCATGGAGAGTGGGAACTCGGGAGGCCTACCCCTCCATCTCACGATAATCCCCGTGGTATGGGAGGAGGACATATGGTTGGTCGTATGGGTGGGCGAATGGACCTGCCACCACCAGGTCCTGCTGCAAGCTTTGGCGCTTCAGCTACTGCGAAGATTAGTATAGATGCATCCCTCGCCGGAGCGATCATTGGGAAGGGTGGGATTAACTCGAAGCAGATTTGTCGCCAAACGGGTGCCAAACTCTCCATCAGGGACAATGAATCAGACCCAAATCTCAGGAACATAGAACTGGAGGGCACTTTTGAGCAAATCAACGAAGCAAGTGCAATGGTGAGGGAGCTCATTATCACAGTTTCAATGTCAGGACCCGGCAAAGCCCATGGTGCGATGGGAGGAGGAGGCCCTGCTCCTTCAGGTAGCAACTATAAAACAAAGCTATGTGATAATTTTGCAAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCGCACGGAGCTGCTGAGTTACGTAAGTCTGGAGTATGATCAAGTTCCCGATTTTGTCGAGCTTTTATTGTTATAAGGGAGTTTTTGCTTTAAAGCGTGTCATCGACGACACGAGTGCGATATTGAAGTTGAAGTTGAGGAGGGTTGGCGGTTCTTGTTCTTGTTATGTTGTAGCTTTATGAGTGTCTTAATATTTGTTGATTAGAAGATAATTAAGTTAAATCATTTTCTTTAATGTCCATTGCATCAGATGTTTTCATAATTTACATAATTTGGTTAAATGTTTGTCCCTTTCAATCGTAGAACAGCACATAGCTAAACACGGACTTTGATATTTTTTTTTGTAAAGATCTTCTCCTTAAGGATTAAATCGAAATTTTGAGTTGGTTGGGTT

mRNA sequence

TTCCCCATCTCTCTAATTTTCTCCATAGCTTTTAAGAAACCTCGATTTCCTTCCCCGCCATAACTCTCCGACTCCACACTTAGGGTTTTCTTCTTCTTCTTCTTCTTCTTCCTCCAATTATTCTTGCGTTCTCTCTGATCTCTGCAACTCTTGTTCCACTGCTTGCTTTCTTTCTCGATTTACTTTCTCGATCTCGATCTGTACTTCCTTACAATGGATATGCGCAAGCGAGGGAGGCCTGAAGCTGCCTTCAATTCTAATGGTTCCTTTAAGAAGCATAAGCAAGAACTGGAGTCCTTATCAACTGTAGGGGGCAAATCGAAGCCATGCACCAAGTTTTTCAGCACTGCTGGTTGCCCATTTGGTGAAAGCTGCCACTTTTTGCATTACGTTCCTGGTGGTTATAATGCTGTTGCTCAAATGATGAATCTTGCTCCTGTTGGTTCTCAACCATCCAGAAATATGGCTGCCCCTCCTGTCTCCAATGGCGGGTCCTCTGCTCCGTCCCAAATCAAAACTCGCATGTGTAACAAGTTCAACAGCGCTGAAGGCTGCAAGTTCGGTGATAAATGTAACTTTGCCCATGGAGAGTGGGAACTCGGGAGGCCTACCCCTCCATCTCACGATAATCCCCGTGGTATGGGAGGAGGACATATGGTTGGTCGTATGGGTGGGCGAATGGACCTGCCACCACCAGGTCCTGCTGCAAGCTTTGGCGCTTCAGCTACTGCGAAGATTAGTATAGATGCATCCCTCGCCGGAGCGATCATTGGGAAGGGTGGGATTAACTCGAAGCAGATTTGTCGCCAAACGGGTGCCAAACTCTCCATCAGGGACAATGAATCAGACCCAAATCTCAGGAACATAGAACTGGAGGGCACTTTTGAGCAAATCAACGAAGCAAGTGCAATGGTGAGGGAGCTCATTATCACAGTTTCAATGTCAGGACCCGGCAAAGCCCATGGTGCGATGGGAGGAGGAGGCCCTGCTCCTTCAGGTAGCAACTATAAAACAAAGCTATGTGATAATTTTGCAAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCGCACGGAGCTGCTGAGTTACGTAAGTCTGGAGTATGATCAAGTTCCCGATTTTGTCGAGCTTTTATTGTTATAAGGGAGTTTTTGCTTTAAAGCGTGTCATCGACGACACGAGTGCGATATTGAAGTTGAAGTTGAGGAGGGTTGGCGGTTCTTGTTCTTGTTATGTTGTAGCTTTATGAGTGTCTTAATATTTGTTGATTAGAAGATAATTAAGTTAAATCATTTTCTTTAATGTCCATTGCATCAGATGTTTTCATAATTTACATAATTTGGTTAAATGTTTGTCCCTTTCAATCGTAGAACAGCACATAGCTAAACACGGACTTTGATATTTTTTTTTGTAAAGATCTTCTCCTTAAGGATTAAATCGAAATTTTGAGTTGGTTGGGTT

Coding sequence (CDS)

ATGGATATGCGCAAGCGAGGGAGGCCTGAAGCTGCCTTCAATTCTAATGGTTCCTTTAAGAAGCATAAGCAAGAACTGGAGTCCTTATCAACTGTAGGGGGCAAATCGAAGCCATGCACCAAGTTTTTCAGCACTGCTGGTTGCCCATTTGGTGAAAGCTGCCACTTTTTGCATTACGTTCCTGGTGGTTATAATGCTGTTGCTCAAATGATGAATCTTGCTCCTGTTGGTTCTCAACCATCCAGAAATATGGCTGCCCCTCCTGTCTCCAATGGCGGGTCCTCTGCTCCGTCCCAAATCAAAACTCGCATGTGTAACAAGTTCAACAGCGCTGAAGGCTGCAAGTTCGGTGATAAATGTAACTTTGCCCATGGAGAGTGGGAACTCGGGAGGCCTACCCCTCCATCTCACGATAATCCCCGTGGTATGGGAGGAGGACATATGGTTGGTCGTATGGGTGGGCGAATGGACCTGCCACCACCAGGTCCTGCTGCAAGCTTTGGCGCTTCAGCTACTGCGAAGATTAGTATAGATGCATCCCTCGCCGGAGCGATCATTGGGAAGGGTGGGATTAACTCGAAGCAGATTTGTCGCCAAACGGGTGCCAAACTCTCCATCAGGGACAATGAATCAGACCCAAATCTCAGGAACATAGAACTGGAGGGCACTTTTGAGCAAATCAACGAAGCAAGTGCAATGGTGAGGGAGCTCATTATCACAGTTTCAATGTCAGGACCCGGCAAAGCCCATGGTGCGATGGGAGGAGGAGGCCCTGCTCCTTCAGGTAGCAACTATAAAACAAAGCTATGTGATAATTTTGCAAAAGGTTCTTGTACTTTTGGTGAGAGATGCCATTTTGCGCACGGAGCTGCTGAGTTACGTAAGTCTGGAGTATGA

Protein sequence

MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYVPGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKCNFAHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVRELIITVSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV

Homology

[Close]

BLAST of CmaCh03G000290 vs. ExPASy Swiss-Prot
Match: Q7XPK1 (Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0665700 PE=2 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 4.6e-86
Identity = 184/305 (60.33%), Postives = 213/305 (69.84%), Query Frame = 0


Query: 4   RKRGRPEAAFNSNGSFKKHKQELESLST-VGGKSKPCTKFFSTAGCPFGESCHFLHYVPG 63
           RKR RP+ A N   +  K  +E ES  T +  K KPCTKFFST GCPFGE CHF H+VPG
Sbjct: 8   RKRSRPDTA-NGGAAGGKRSRETESFQTGLSSKLKPCTKFFSTIGCPFGEGCHFSHFVPG 67

Query: 64  GYNAVAQMMNLA-PVGSQPSRNMAAPPVSNGGSSAP-SQIKTRMCNKFNSAEGCKFGDKC 123
           GY AVA+ +NL  P    P+R  A    + GG+S P S  KTRMC K+N+AEGCKFGDKC
Sbjct: 68  GYQAVAKTLNLGNPAVPAPAR--APMDHAAGGNSHPASSGKTRMCTKYNTAEGCKFGDKC 127

Query: 124 NFAHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPPPG----PAASFGASATAKIS 183
           +FAHGE ELG+P   SH++      G   GR GGR + PPP     PA +FGASATAKIS
Sbjct: 128 HFAHGERELGKPAYMSHESAMAPPMG---GRYGGRPEPPPPAAMGPPAGNFGASATAKIS 187

Query: 184 IDASLAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVRE 243
           +DASLAG IIGKGG+N+KQICR TG KLSIRD+ESD NL+NIELEG F+QI +AS MV E
Sbjct: 188 VDASLAGGIIGKGGVNTKQICRVTGVKLSIRDHESDSNLKNIELEGNFDQIKQASNMVGE 247

Query: 244 LIITVSMSGP-----GKAHGAMGGGGPAPSG-SNYKTKLCDNFAKGSCTFGERCHFAHGA 296
           LI T+S S P     G A GA   G   P G SNYKTKLC+NF KG+CTFG+RCHFAHG 
Sbjct: 248 LIATISPSTPAKKPAGSAAGAAPAGRGGPGGRSNYKTKLCENFVKGTCTFGDRCHFAHGE 306

[Close]

BLAST of CmaCh03G000290 vs. ExPASy Swiss-Prot
Match: Q7F8R0 (Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0194200 PE=2 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 7.8e-86
Identity = 182/304 (59.87%), Postives = 214/304 (70.39%), Query Frame = 0


Query: 4   RKRGRPEAAFNSNGSFKKHKQELESLST-VGGKSKPCTKFFSTAGCPFGESCHFLHYVPG 63
           RKRG+P+ A   NG+  K  +E ES  T VG KSKPCTKFFST+GCPFGE CHFLH+ PG
Sbjct: 6   RKRGKPDGA---NGAGGKRARESESFQTGVGSKSKPCTKFFSTSGCPFGEGCHFLHHFPG 65

Query: 64  GYNAVAQMMNL-APVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKCN 123
           GY AVA+M NL  P  + P   M        G   P+ +KTR+CNK+N+AEGCK+GDKC+
Sbjct: 66  GYQAVAKMTNLGGPAIAPPPGRMPMGNAVPDGPPTPT-VKTRLCNKYNTAEGCKWGDKCH 125

Query: 124 FAHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPP-PGPA----ASFGASATAKIS 183
           FAHGE ELG+P       P  MG      R  G    PP P PA    ASFGASATAKIS
Sbjct: 126 FAHGERELGKPMLMDSSMPPPMG-----PRPTGHFAPPPMPSPAMSTPASFGASATAKIS 185

Query: 184 IDASLAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVRE 243
           +DASLAG IIG+GG+N+KQI R TGAKL+IRD+ESD NL+NIELEGTF+QI  ASAMVRE
Sbjct: 186 VDASLAGGIIGRGGVNTKQISRVTGAKLAIRDHESDTNLKNIELEGTFDQIKNASAMVRE 245

Query: 244 LIITVSMSGPGKAHGAMG----GGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAE 297
           LI+++    P +    +G    GGGP   GSN+KTKLC+NF KGSCTFG+RCHFAHG  E
Sbjct: 246 LIVSIGGGAPPQGKKPVGGSHRGGGP---GSNFKTKLCENFTKGSCTFGDRCHFAHGENE 297

[Close]

BLAST of CmaCh03G000290 vs. ExPASy Swiss-Prot
Match: Q69XQ3 (Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0618100 PE=2 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 4.9e-80
Identity = 168/295 (56.95%), Postives = 201/295 (68.14%), Query Frame = 0


Query: 5   KRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYVPGGY 64
           KR  PE    +NG+ K+ +    S   VG K KPCTKFFST+GCPFG SCHFLH  PGGY
Sbjct: 7   KRAAPE---GTNGAAKRARASESSQVGVGSKLKPCTKFFSTSGCPFGSSCHFLHNFPGGY 66

Query: 65  NAVAQMMNL--APVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKCNF 124
            A A+M +     V + P R    P   NG  +  S +KTRMCNK+N+AEGCK+G KC+F
Sbjct: 67  QAAAKMTSHGGTAVAAPPGRMPLGPGAPNGPPT--SSVKTRMCNKYNTAEGCKWGSKCHF 126

Query: 125 AHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDASLA 184
           AHGE ELG+P    +  P  MG            D+ PP   ++FGASATAKIS+DASLA
Sbjct: 127 AHGERELGKPMLLDNSMPHPMGSMPFEAPPMPGPDIVPP---STFGASATAKISVDASLA 186

Query: 185 GAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVRELIITVS 244
           G IIGKGG N+K I R TGAKL+IRDNES+PNL+NIELEGTF+QI  ASAMV ELI+ +S
Sbjct: 187 GGIIGKGGTNTKHISRMTGAKLAIRDNESNPNLKNIELEGTFDQIKHASAMVTELIVRIS 246

Query: 245 MSGPGKAHGAMG--GGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRK 296
            + P   +   G   GGP   GSN+KTKLC+NF KGSCTFG+RCHFAHG +ELRK
Sbjct: 247 GNAPPAKNPGRGSHAGGP---GSNFKTKLCENFNKGSCTFGDRCHFAHGESELRK 290

[Close]

BLAST of CmaCh03G000290 vs. ExPASy Swiss-Prot
Match: Q9FG30 (Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=At5g06770 PE=1 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 1.4e-74
Identity = 166/301 (55.15%), Postives = 191/301 (63.46%), Query Frame = 0


Query: 1   MDMRKRGRPEAA--FNSNGSFKKHKQELESLST-VGGKSKPCTKFFSTAGCPFGESCHFL 60
           MD RKRGRPEAA   NSNG FK+ KQE+ES+ST +G KSKPCTKFFST+GCPFG++CHFL
Sbjct: 1   MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60

Query: 61  HYVPGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFG 120
           HYVPGGYNA AQM NL P  SQ SRNM                                 
Sbjct: 61  HYVPGGYNAAAQMTNLRPPVSQVSRNM--------------------------------- 120

Query: 121 DKCNFAHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPPPGPAASFGASATAKISI 180
                                     G G   GR  GR D P  GP + FGAS T+KIS+
Sbjct: 121 -------------------------QGSGGPGGRFSGRGD-PGSGPVSIFGAS-TSKISV 180

Query: 181 DASLAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVREL 240
           DASLAGAIIGKGGI+SKQICR+TGAKLSI+D+E DPNL+ IELEGTFEQIN AS MVREL
Sbjct: 181 DASLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVREL 239

Query: 241 IITVSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 299
           I    +    K  G  G  G    GSNYKTK+CD ++KG+CT+G+RCHFAHG +ELR+SG
Sbjct: 241 I--GRLGSVKKPQGIGGPEGKPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSG 239

[Close]

BLAST of CmaCh03G000290 vs. ExPASy Swiss-Prot
Match: Q9C7C3 (Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=At3g12130 PE=2 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 8.9e-74
Identity = 165/308 (53.57%), Postives = 198/308 (64.29%), Query Frame = 0


Query: 1   MDMRKRGRPEA-AFNSN-GSFKKHKQELESLST-VGGKSKPCTKFFSTAGCPFGESCHFL 60
           MD RKRGRPEA +FNSN G +KK KQE+ES ST +G KSKPCTKFFST+GCPFGE+CHFL
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60

Query: 61  HYVPGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFG 120
           HYVPGGYNAV+QM N+ P   Q SRNM                                 
Sbjct: 61  HYVPGGYNAVSQMTNMGPPIPQVSRNM--------------------------------- 120

Query: 121 DKCNFAHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPPPGPAASFGASATAKISI 180
                                  +G G G   GR  GR +   PG  ++FG SATA+ S+
Sbjct: 121 -----------------------QGSGNG---GRFSGRGE-SGPGHVSNFGDSATARFSV 180

Query: 181 DASLAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVREL 240
           DASLAGAIIGKGG++SKQICRQTG KLSI+D+E DPNL+NI LEGT EQI+EASAMV++L
Sbjct: 181 DASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDL 240

Query: 241 IITVSMSGPGKAHGAMGGGG-------PAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGA 299
           I  ++ +      G +GGGG       P P GSN+KTK+C+ F+KG+CTFG+RCHFAHG 
Sbjct: 241 IGRLNSAAKKPPGGGLGGGGGMGSEGKPHP-GSNFKTKICERFSKGNCTFGDRCHFAHGE 247

[Close]

BLAST of CmaCh03G000290 vs. ExPASy TrEMBL
Match: A0A6J1HVM0 (zinc finger CCCH domain-containing protein 31 OS=Cucurbita maxima OX=3661 GN=LOC111467244 PE=4 SV=1)

HSP 1 Score: 604.7 bits (1558), Expect = 2.0e-169
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120
           PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC
Sbjct: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120

Query: 121 NFAHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDAS 180
           NFAHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDAS
Sbjct: 121 NFAHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDAS 180

Query: 181 LAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVRELIIT 240
           LAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVRELIIT
Sbjct: 181 LAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVRELIIT 240

Query: 241 VSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 299
           VSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 VSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 298

[Close]

BLAST of CmaCh03G000290 vs. ExPASy TrEMBL
Match: A0A6J1ESD4 (zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111435541 PE=4 SV=1)

HSP 1 Score: 594.7 bits (1532), Expect = 2.1e-166
Identity = 295/298 (98.99%), Postives = 296/298 (99.33%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120
           PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC
Sbjct: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120

Query: 121 NFAHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDAS 180
           NFAHGEWELGRPTPPSHDNPRGM GGHMVGRMGGRMDLPPPGPAASFGASATAKISIDAS
Sbjct: 121 NFAHGEWELGRPTPPSHDNPRGM-GGHMVGRMGGRMDLPPPGPAASFGASATAKISIDAS 180

Query: 181 LAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVRELIIT 240
           LAGAIIGKGGINSKQICRQTGAKLSIRD+ESDPNLRNIELEGTFEQINEASAMVRELIIT
Sbjct: 181 LAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIIT 240

Query: 241 VSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 299
           VSMSGPGK HGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 VSMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297

[Close]

BLAST of CmaCh03G000290 vs. ExPASy TrEMBL
Match: A0A1S3B4W9 (zinc finger CCCH domain-containing protein 36-like OS=Cucumis melo OX=3656 GN=LOC103486060 PE=4 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 3.0e-157
Identity = 283/305 (92.79%), Postives = 291/305 (95.41%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVG KSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPP-VSNGGSSAPSQIKTRMCNKFNSAEGCKFGDK 120
           PGGYN VAQMMNLAPVG+QPSRN+AAPP V+NGGSSAPSQ+KTRMCNKFN+AEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPTPPSHDNPRGMGGG------HMVGRMGGRMDLPPPGPAASFGASATA 180
           CNFAHGEWELGRP PPSHDNPR MGGG      HMVGRMGGRMDLPPPGPAASFGASATA
Sbjct: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATA 180

Query: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAM 240
           KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRD+ESDPNLRNIELEGTFEQINEASAM
Sbjct: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240

Query: 241 VRELIITVSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 299
           VRELIITVSM+GPGKA G M GGGPAP+GSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
Sbjct: 241 VRELIITVSMAGPGKASGGM-GGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 300

[Close]

BLAST of CmaCh03G000290 vs. ExPASy TrEMBL
Match: A0A0A0KZ79 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507380 PE=4 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 3.3e-156
Identity = 281/306 (91.83%), Postives = 290/306 (94.77%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVG KSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPP-VSNGGSSAPSQIKTRMCNKFNSAEGCKFGDK 120
           PGGYN VAQMMNLAPVG+QPSRN+AAPP V+NGG SAPSQ+KTRMCNK+N+AEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLAPVGAQPSRNIAAPPSVTNGGPSAPSQVKTRMCNKYNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPTPPSHDNPRGMGGG-------HMVGRMGGRMDLPPPGPAASFGASAT 180
           CNFAHGEWELGRP PPSHDNPR MGGG       HMVGRMGGRMDLPPPGPAASFGASAT
Sbjct: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASAT 180

Query: 181 AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASA 240
           AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRD+ESDPNLRNIELEGTFEQINEASA
Sbjct: 181 AKISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASA 240

Query: 241 MVRELIITVSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAE 299
           MVRELIITVSM+GPGKA G M GGGPAP+GSNYKTKLCDNFAKGSCTFGERCHFAHGAAE
Sbjct: 241 MVRELIITVSMAGPGKASGGM-GGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAE 300

[Close]

BLAST of CmaCh03G000290 vs. ExPASy TrEMBL
Match: A0A6J1EBA5 (zinc finger CCCH domain-containing protein 31-like OS=Cucurbita moschata OX=3662 GN=LOC111432553 PE=4 SV=1)

HSP 1 Score: 538.5 bits (1386), Expect = 1.8e-149
Identity = 275/299 (91.97%), Postives = 285/299 (95.32%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKR RPE+AFNSNG+FKKHKQELE LSTVG KSKPCTKFFSTAGCPFGESCHFLH+V
Sbjct: 1   MDMRKR-RPESAFNSNGTFKKHKQELEPLSTVGSKSKPCTKFFSTAGCPFGESCHFLHHV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPP-VSNGGSSAPSQIKTRMCNKFNSAEGCKFGDK 120
           PGGYN VAQMMNL PVGSQPSRNMAAPP V+NGGSSAPSQ+KTRMCNK+N+AEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLPPVGSQPSRNMAAPPSVTNGGSSAPSQVKTRMCNKYNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDA 180
           CNFAHGEWELGR  PPSHDNPR M GGHMVGRMGGRMDLP PGPAASFGASATAKISIDA
Sbjct: 121 CNFAHGEWELGR--PPSHDNPRAM-GGHMVGRMGGRMDLPQPGPAASFGASATAKISIDA 180

Query: 181 SLAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVRELII 240
           SLAGAIIGKGGINSKQICRQTGAKLSIRD+ESD NLRNIELEGTFEQINEASAMVRELII
Sbjct: 181 SLAGAIIGKGGINSKQICRQTGAKLSIRDHESDTNLRNIELEGTFEQINEASAMVRELII 240

Query: 241 TVSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 299
           TVSM+GPGKA GAM GGGPAPSGSNYKTK+CDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 TVSMAGPGKAPGAM-GGGPAPSGSNYKTKMCDNFAKGSCTFGERCHFAHGAAELRKSGV 294

[Close]

BLAST of CmaCh03G000290 vs. NCBI nr
Match: XP_022967865.1 (zinc finger CCCH domain-containing protein 31 [Cucurbita maxima])

HSP 1 Score: 604.7 bits (1558), Expect = 4.2e-169
Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120
           PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC
Sbjct: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120

Query: 121 NFAHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDAS 180
           NFAHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDAS
Sbjct: 121 NFAHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDAS 180

Query: 181 LAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVRELIIT 240
           LAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVRELIIT
Sbjct: 181 LAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVRELIIT 240

Query: 241 VSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 299
           VSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 VSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 298

[Close]

BLAST of CmaCh03G000290 vs. NCBI nr
Match: XP_023545090.1 (zinc finger CCCH domain-containing protein 31-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 595.1 bits (1533), Expect = 3.3e-166
Identity = 295/298 (98.99%), Postives = 297/298 (99.66%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120
           PGGYNAVAQMMNLAPVGSQPSRNMAAPPV+NGGSSAPSQIKTRMCNKFNSAEGCKFGDKC
Sbjct: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVTNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120

Query: 121 NFAHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDAS 180
           NFAHGEWELGRPTPPSHDNPRGM GGHMVGRMGGRMDLPPPGPAASFGASATAKISIDAS
Sbjct: 121 NFAHGEWELGRPTPPSHDNPRGM-GGHMVGRMGGRMDLPPPGPAASFGASATAKISIDAS 180

Query: 181 LAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVRELIIT 240
           LAGAIIGKGGINSKQICRQTGAKLSIRD+ESDPNLRNIELEGTFEQINEASAMVRELIIT
Sbjct: 181 LAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIIT 240

Query: 241 VSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 299
           VSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 VSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297

[Close]

BLAST of CmaCh03G000290 vs. NCBI nr
Match: XP_022928715.1 (zinc finger CCCH domain-containing protein 14-like [Cucurbita moschata] >KAG6603175.1 Zinc finger CCCH domain-containing protein 14, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033487.1 Zinc finger CCCH domain-containing protein 14 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 594.7 bits (1532), Expect = 4.3e-166
Identity = 295/298 (98.99%), Postives = 296/298 (99.33%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120
           PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC
Sbjct: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120

Query: 121 NFAHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDAS 180
           NFAHGEWELGRPTPPSHDNPRGM GGHMVGRMGGRMDLPPPGPAASFGASATAKISIDAS
Sbjct: 121 NFAHGEWELGRPTPPSHDNPRGM-GGHMVGRMGGRMDLPPPGPAASFGASATAKISIDAS 180

Query: 181 LAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVRELIIT 240
           LAGAIIGKGGINSKQICRQTGAKLSIRD+ESDPNLRNIELEGTFEQINEASAMVRELIIT
Sbjct: 181 LAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAMVRELIIT 240

Query: 241 VSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 299
           VSMSGPGK HGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV
Sbjct: 241 VSMSGPGKGHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSGV 297

[Close]

BLAST of CmaCh03G000290 vs. NCBI nr
Match: XP_008442098.1 (PREDICTED: zinc finger CCCH domain-containing protein 36-like [Cucumis melo])

HSP 1 Score: 564.3 bits (1453), Expect = 6.2e-157
Identity = 283/305 (92.79%), Postives = 291/305 (95.41%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVG KSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPP-VSNGGSSAPSQIKTRMCNKFNSAEGCKFGDK 120
           PGGYN VAQMMNLAPVG+QPSRN+AAPP V+NGGSSAPSQ+KTRMCNKFN+AEGCKFGDK
Sbjct: 61  PGGYNVVAQMMNLAPVGAQPSRNVAAPPSVTNGGSSAPSQVKTRMCNKFNTAEGCKFGDK 120

Query: 121 CNFAHGEWELGRPTPPSHDNPRGMGGG------HMVGRMGGRMDLPPPGPAASFGASATA 180
           CNFAHGEWELGRP PPSHDNPR MGGG      HMVGRMGGRMDLPPPGPAASFGASATA
Sbjct: 121 CNFAHGEWELGRPNPPSHDNPRAMGGGGGGGGVHMVGRMGGRMDLPPPGPAASFGASATA 180

Query: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAM 240
           KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRD+ESDPNLRNIELEGTFEQINEASAM
Sbjct: 181 KISIDASLAGAIIGKGGINSKQICRQTGAKLSIRDHESDPNLRNIELEGTFEQINEASAM 240

Query: 241 VRELIITVSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 299
           VRELIITVSM+GPGKA G M GGGPAP+GSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL
Sbjct: 241 VRELIITVSMAGPGKASGGM-GGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAEL 300

[Close]

BLAST of CmaCh03G000290 vs. NCBI nr
Match: XP_038882544.1 (zinc finger CCCH domain-containing protein 31 [Benincasa hispida])

HSP 1 Score: 561.6 bits (1446), Expect = 4.0e-156
Identity = 278/302 (92.05%), Postives = 289/302 (95.70%), Query Frame = 0


Query: 1   MDMRKRGRPEAAFNSNGSFKKHKQELESLSTVGGKSKPCTKFFSTAGCPFGESCHFLHYV 60
           MDMRKRGRP+AAFN+NG+FKKHKQELESLSTVG KSKPCTKFFSTAGCPFGESCHFLHYV
Sbjct: 1   MDMRKRGRPDAAFNTNGAFKKHKQELESLSTVGSKSKPCTKFFSTAGCPFGESCHFLHYV 60

Query: 61  PGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFGDKC 120
           PGGYN VAQMMNLAPVGSQPSRNM APPV+NGGSSAPSQ+K+RMCNK+N+AEGCKFGDKC
Sbjct: 61  PGGYNVVAQMMNLAPVGSQPSRNMPAPPVTNGGSSAPSQVKSRMCNKYNTAEGCKFGDKC 120

Query: 121 NFAHGEWELGRPTPPSHDNPRGM----GGGHMVGRMGGRMDLPPPGPAASFGASATAKIS 180
           NFAHGEWELGRP PPSHDNPR M    GGGHMVGRMGGRMDLPPPGPAASFGASATAKIS
Sbjct: 121 NFAHGEWELGRPNPPSHDNPRAMGGGGGGGHMVGRMGGRMDLPPPGPAASFGASATAKIS 180

Query: 181 IDASLAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVRE 240
           IDASLAGAIIGKGGINSKQICRQTGAKLSIRD+E DPNLRNIELEGTFEQINEASAMVRE
Sbjct: 181 IDASLAGAIIGKGGINSKQICRQTGAKLSIRDHELDPNLRNIELEGTFEQINEASAMVRE 240

Query: 241 LIITVSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKS 299
           LIITVSM+GPGKA G M GGGPAP+GSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKS
Sbjct: 241 LIITVSMTGPGKAPGGM-GGGPAPTGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKS 300

[Close]

BLAST of CmaCh03G000290 vs. TAIR 10
Match: AT5G06770.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 281.2 bits (718), Expect = 9.8e-76
Identity = 166/301 (55.15%), Postives = 191/301 (63.46%), Query Frame = 0


Query: 1   MDMRKRGRPEAA--FNSNGSFKKHKQELESLST-VGGKSKPCTKFFSTAGCPFGESCHFL 60
           MD RKRGRPEAA   NSNG FK+ KQE+ES+ST +G KSKPCTKFFST+GCPFG++CHFL
Sbjct: 1   MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60

Query: 61  HYVPGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFG 120
           HYVPGGYNA AQM NL P  SQ SRNM                                 
Sbjct: 61  HYVPGGYNAAAQMTNLRPPVSQVSRNM--------------------------------- 120

Query: 121 DKCNFAHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPPPGPAASFGASATAKISI 180
                                     G G   GR  GR D P  GP + FGAS T+KIS+
Sbjct: 121 -------------------------QGSGGPGGRFSGRGD-PGSGPVSIFGAS-TSKISV 180

Query: 181 DASLAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVREL 240
           DASLAGAIIGKGGI+SKQICR+TGAKLSI+D+E DPNL+ IELEGTFEQIN AS MVREL
Sbjct: 181 DASLAGAIIGKGGIHSKQICRETGAKLSIKDHERDPNLKIIELEGTFEQINVASGMVREL 239

Query: 241 IITVSMSGPGKAHGAMGGGGPAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGAAELRKSG 299
           I    +    K  G  G  G    GSNYKTK+CD ++KG+CT+G+RCHFAHG +ELR+SG
Sbjct: 241 I--GRLGSVKKPQGIGGPEGKPHPGSNYKTKICDRYSKGNCTYGDRCHFAHGESELRRSG 239

[Close]

BLAST of CmaCh03G000290 vs. TAIR 10
Match: AT3G12130.1 (KH domain-containing protein / zinc finger (CCCH type) family protein )

HSP 1 Score: 278.5 bits (711), Expect = 6.3e-75
Identity = 165/308 (53.57%), Postives = 198/308 (64.29%), Query Frame = 0


Query: 1   MDMRKRGRPEA-AFNSN-GSFKKHKQELESLST-VGGKSKPCTKFFSTAGCPFGESCHFL 60
           MD RKRGRPEA +FNSN G +KK KQE+ES ST +G KSKPCTKFFST+GCPFGE+CHFL
Sbjct: 1   MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60

Query: 61  HYVPGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEGCKFG 120
           HYVPGGYNAV+QM N+ P   Q SRNM                                 
Sbjct: 61  HYVPGGYNAVSQMTNMGPPIPQVSRNM--------------------------------- 120

Query: 121 DKCNFAHGEWELGRPTPPSHDNPRGMGGGHMVGRMGGRMDLPPPGPAASFGASATAKISI 180
                                  +G G G   GR  GR +   PG  ++FG SATA+ S+
Sbjct: 121 -----------------------QGSGNG---GRFSGRGE-SGPGHVSNFGDSATARFSV 180

Query: 181 DASLAGAIIGKGGINSKQICRQTGAKLSIRDNESDPNLRNIELEGTFEQINEASAMVREL 240
           DASLAGAIIGKGG++SKQICRQTG KLSI+D+E DPNL+NI LEGT EQI+EASAMV++L
Sbjct: 181 DASLAGAIIGKGGVSSKQICRQTGVKLSIQDHERDPNLKNIVLEGTLEQISEASAMVKDL 240

Query: 241 IITVSMSGPGKAHGAMGGGG-------PAPSGSNYKTKLCDNFAKGSCTFGERCHFAHGA 299
           I  ++ +      G +GGGG       P P GSN+KTK+C+ F+KG+CTFG+RCHFAHG 
Sbjct: 241 IGRLNSAAKKPPGGGLGGGGGMGSEGKPHP-GSNFKTKICERFSKGNCTFGDRCHFAHGE 247

[Close]

BLAST of CmaCh03G000290 vs. TAIR 10
Match: AT1G32360.1 (Zinc finger (CCCH-type) family protein )

HSP 1 Score: 65.9 bits (159), Expect = 6.5e-11
Identity = 43/119 (36.13%), Postives = 53/119 (44.54%), Query Frame = 0


Query: 35  KSKPCTKFFSTAGCPFGESCHFLH-YVPGGYNAVAQMMNLAPVGSQPSRNMAAPPVSNGG 94
           K + C KF++  GCP+GESC FLH        +VA  +     GS          V  GG
Sbjct: 174 KGRHCKKFYTEEGCPYGESCTFLHDEASRNRESVAISLGPGGYGSGGGGGSGGGSVGGGG 233

Query: 95  SSA---------------------PSQIKTRMCNKFNSAEGCKFGDKCNFAHGEWELGR 132
           SS+                     PS  KTR+CNK+     C FG KC+FAHG  EL R
Sbjct: 234 SSSNVVVLGGGGGSGSGSGIQILKPSNWKTRICNKWEITGYCPFGAKCHFAHGAAELHR 292

[Close]

BLAST of CmaCh03G000290 vs. TAIR 10
Match: AT2G35430.1 (Zinc finger C-x8-C-x5-C-x3-H type family protein )

HSP 1 Score: 52.8 bits (125), Expect = 5.7e-07
Identity = 45/129 (34.88%), Postives = 58/129 (44.96%), Query Frame = 0


Query: 12  AFNSNGSFKKHKQELESLSTVGGKS----KPCTKFFSTAGCPF-GESCHFLHYVPGGYNA 71
           A NS+G+    K+   S S+  GKS    K C K F    CP+   SCHF H        
Sbjct: 46  AINSDGAESPSKKTRSSSSSEIGKSFFKTKLCFK-FRAGTCPYSASSCHFAHSAEELRLP 105

Query: 72  VAQMMNLAPVGSQPSRNMAAPPVSNGGSSAPSQI------KTRMCNKFNSAEGCKFGDKC 130
                N     ++ SRN  +  VS G     +Q       KTR+CNK+ +   C FG  C
Sbjct: 106 PPPPPNWQETVTEASRNRESFAVSLGPRGNVAQTLKSPNWKTRICNKWQTTGYCPFGSHC 165

[Close]

BLAST of CmaCh03G000290 vs. TAIR 10
Match: AT2G25970.1 (KH domain-containing protein )

HSP 1 Score: 48.1 bits (113), Expect = 1.4e-05
Identity = 55/194 (28.35%), Postives = 87/194 (44.85%), Query Frame = 0


Query: 74  APVGSQPSRNMAAPPVSNGGSSAPSQIKTRMCNKFNSAEG--CKFGDKCNFAHGEWELGR 133
           AP G  PS   + PP  +    A  + +       NSA+    +  +  ++ +G+   G 
Sbjct: 48  APTGLPPSSYNSVPPPMDEIQIAKQKAQEIAARLLNSADAKRPRVDNGASYDYGD-NKGF 107

Query: 134 PTPPSHDNPRGMGGGHMVGRMGGRMDLPPPGPAASFGASATAKISIDASLAGAIIGKGGI 193
            + PS              +M G +    P    SF    T KI I     G IIGKGG 
Sbjct: 108 SSYPSEGK-----------QMSGTVPSSIPVSYGSF-QGTTKKIDIPNMRVGVIIGKGGE 167

Query: 194 NSKQICRQTGAKLSI-RDNESDPN--LRNIELEGTFEQINEASAMVRELIITVSMSGPGK 253
             K +  Q+GAK+ + RD ++DPN   R ++L GT +QI++A  ++ +++     +  G 
Sbjct: 168 TIKYLQLQSGAKIQVTRDMDADPNCATRTVDLTGTPDQISKAEQLITDVL---QEAEAGN 225

Query: 254 AHGAMGGGGPAPSG 263
             G+ GGGG    G
Sbjct: 228 TAGSGGGGGRRMGG 225

The following BLAST results are available for this feature:

BLAST of CmaCh03G000290 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q7XPK1	4.6e-86	60.33	Zinc finger CCCH domain-containing protein 31 OS=Oryza sativa subsp. japonica OX...	[more]
Q7F8R0	7.8e-86	59.87	Zinc finger CCCH domain-containing protein 14 OS=Oryza sativa subsp. japonica OX...	[more]
Q69XQ3	4.9e-80	56.95	Zinc finger CCCH domain-containing protein 44 OS=Oryza sativa subsp. japonica OX...	[more]
Q9FG30	1.4e-74	55.15	Zinc finger CCCH domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9C7C3	8.9e-74	53.57	Zinc finger CCCH domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of CmaCh03G000290 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HVM0	2.0e-169	100.00	zinc finger CCCH domain-containing protein 31 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]
A0A6J1ESD4	2.1e-166	98.99	zinc finger CCCH domain-containing protein 14-like OS=Cucurbita moschata OX=3662...	[more]
A0A1S3B4W9	3.0e-157	92.79	zinc finger CCCH domain-containing protein 36-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A0A0KZ79	3.3e-156	91.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G507380 PE=4 SV=1	[more]
A0A6J1EBA5	1.8e-149	91.97	zinc finger CCCH domain-containing protein 31-like OS=Cucurbita moschata OX=3662...	[more]

BLAST of CmaCh03G000290 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022967865.1	4.2e-169	100.00	zinc finger CCCH domain-containing protein 31 [Cucurbita maxima]	[more]
XP_023545090.1	3.3e-166	98.99	zinc finger CCCH domain-containing protein 31-like [Cucurbita pepo subsp. pepo]	[more]
XP_022928715.1	4.3e-166	98.99	zinc finger CCCH domain-containing protein 14-like [Cucurbita moschata] >KAG6603...	[more]
XP_008442098.1	6.2e-157	92.79	PREDICTED: zinc finger CCCH domain-containing protein 36-like [Cucumis melo]	[more]
XP_038882544.1	4.0e-156	92.05	zinc finger CCCH domain-containing protein 31 [Benincasa hispida]	[more]

BLAST of CmaCh03G000290 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06770.1	9.8e-76	55.15	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT3G12130.1	6.3e-75	53.57	KH domain-containing protein / zinc finger (CCCH type) family protein	[more]
AT1G32360.1	6.5e-11	36.13	Zinc finger (CCCH-type) family protein	[more]
AT2G35430.1	5.7e-07	34.88	Zinc finger C-x8-C-x5-C-x3-H type family protein	[more]
AT2G25970.1	1.4e-05	28.35	KH domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 169..239 e-value: 6.7E-13 score: 58.9
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 99..126 e-value: 0.02 score: 24.1 coord: 35..60 e-value: 1.1 score: 16.1 coord: 264..290 e-value: 6.0E-8 score: 42.4
IPR000571	Zinc finger, CCCH-type	PFAM	PF00642	zf-CCCH	coord: 101..126 e-value: 1.6E-5 score: 24.6 coord: 35..58 e-value: 3.0E-4 score: 20.6 coord: 265..289 e-value: 1.3E-9 score: 37.8
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 33..61 score: 12.380093
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 99..127 score: 13.516174
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 264..291 score: 16.558243
None	No IPR available	GENE3D	4.10.1000.10		coord: 94..131 e-value: 3.9E-11 score: 44.1 coord: 263..296 e-value: 2.9E-14 score: 54.1
None	No IPR available	PANTHER	PTHR10288:SF273	TRANSCRIPTION FACTOR C3H FAMILY-RELATED	coord: 9..297
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 9..297
None	No IPR available	PROSITE	PS50084	KH_TYPE_1	coord: 170..234 score: 14.885542
None	No IPR available	CDD	cd00105	KH-I	coord: 172..234 e-value: 1.361E-15 score: 67.9703
IPR036612	K Homology domain, type 1 superfamily	GENE3D	3.30.1370.10	K Homology domain, type 1	coord: 166..262 e-value: 3.2E-16 score: 61.0
IPR036612	K Homology domain, type 1 superfamily	SUPERFAMILY	54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 159..240
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 173..236 e-value: 3.5E-12 score: 46.0
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 263..294
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 98..130
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 34..59

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh03G000290.1	CmaCh03G000290.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding