CmaCh02G017430 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G017430
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like
Location	Cma_Chr02: 9777906 .. 9778942 (-)
RNA-Seq Expression	CmaCh02G017430
Synteny	CmaCh02G017430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTCCCTCTCTCTTTGTGTACAGTTTGGATGAGAGGGAATGGAAGAACAATCCCATCAATCACCAAAAAACTTAGTTGTTCTACCTTTTTTAGAAAACCCCAAACAAAACCAATATCCTTTCAACTACACAAATCCAAACAATACGCCCTTCTTCACATCTTCTTCCCAATCTCATCAAAAATCCACCTTTTACTTTACCCTCCTCACCTTCTTCCTTACAATCCCCATATCACTGCCCTATAACAACAGCAACAACAACAACCCTGATTTTGTCTCTTCAAAAATCAGCTGCAACCAACAGTCTTTAACAAACAGACCAAAAAAGAAAAGGAAAGGAAATTAGGATGGACTTCTCAGGGAGTAGCAGCAATAGCATCAACATCAACAACAACAACAACAACAACATCGCCATGAACCACCAACACTCCGCAACAGCCTCCTCTTCCAGCAGCAGATATGAGAATCAAAAGCGCCGTGACTGGAAAACTTTCGGTCAATACCTCAACAATCATCGCCCACCGCTCGCCCTCTCACGATGTAGCGGAGCTCATGTCCTCGAATTCCTCAGGTACTAAATTACTTCAAATAAAAAATGAACTGAATTGCTTCAAAGTTACAAGCTTTGTGAGTGAGCGCAGGTACCTAGATCAATTTGGAAAGACGAAAGTGCACACACCCATCTGCCCTTTCTACGGCCTTCCGAACCCTCCCGCACCCTGCCCATGCCCTCTTCGGCAGGCGTGGGGGAGCCTCGACGCTTTGGTGGGGCGGCTTCGAGCCGCTTTTGAAGAGAATGGAGGGAAGCCTGAAGCCAATCCATTTGGGGCTAGAGCTGTGAGGCTGTATCTTCGTGAGGTTCGTGATGTGCAGTCAAAGGCCAGAGGGATCAGCTACGACAAGAAAAGAAAGCGCCCACCATCTCAACACCCCTTGCCTCCTCCTCACGCTGCACCTTCATGAGATCAAATCATATCACAAAAGGACCAAAATTTCCCCAATTGGTTATTGCTCTAAACCTCTTCCAAAATCATGGGG

mRNA sequence

CTTTCCCTCTCTCTTTGTGTACAGTTTGGATGAGAGGGAATGGAAGAACAATCCCATCAATCACCAAAAAACTTAGTTGTTCTACCTTTTTTAGAAAACCCCAAACAAAACCAATATCCTTTCAACTACACAAATCCAAACAATACGCCCTTCTTCACATCTTCTTCCCAATCTCATCAAAAATCCACCTTTTACTTTACCCTCCTCACCTTCTTCCTTACAATCCCCATATCACTGCCCTATAACAACAGCAACAACAACAACCCTGATTTTGTCTCTTCAAAAATCAGCTGCAACCAACAGTCTTTAACAAACAGACCAAAAAAGAAAAGGAAAGGAAATTAGGATGGACTTCTCAGGGAGTAGCAGCAATAGCATCAACATCAACAACAACAACAACAACAACATCGCCATGAACCACCAACACTCCGCAACAGCCTCCTCTTCCAGCAGCAGATATGAGAATCAAAAGCGCCGTGACTGGAAAACTTTCGGTCAATACCTCAACAATCATCGCCCACCGCTCGCCCTCTCACGATGTAGCGGAGCTCATGTCCTCGAATTCCTCAGGTACCTAGATCAATTTGGAAAGACGAAAGTGCACACACCCATCTGCCCTTTCTACGGCCTTCCGAACCCTCCCGCACCCTGCCCATGCCCTCTTCGGCAGGCGTGGGGGAGCCTCGACGCTTTGGTGGGGCGGCTTCGAGCCGCTTTTGAAGAGAATGGAGGGAAGCCTGAAGCCAATCCATTTGGGGCTAGAGCTGTGAGGCTGTATCTTCGTGAGGTTCGTGATGTGCAGTCAAAGGCCAGAGGGATCAGCTACGACAAGAAAAGAAAGCGCCCACCATCTCAACACCCCTTGCCTCCTCCTCACGCTGCACCTTCATGAGATCAAATCATATCACAAAAGGACCAAAATTTCCCCAATTGGTTATTGCTCTAAACCTCTTCCAAAATCATGGGG

Coding sequence (CDS)

ATGGACTTCTCAGGGAGTAGCAGCAATAGCATCAACATCAACAACAACAACAACAACAACATCGCCATGAACCACCAACACTCCGCAACAGCCTCCTCTTCCAGCAGCAGATATGAGAATCAAAAGCGCCGTGACTGGAAAACTTTCGGTCAATACCTCAACAATCATCGCCCACCGCTCGCCCTCTCACGATGTAGCGGAGCTCATGTCCTCGAATTCCTCAGGTACCTAGATCAATTTGGAAAGACGAAAGTGCACACACCCATCTGCCCTTTCTACGGCCTTCCGAACCCTCCCGCACCCTGCCCATGCCCTCTTCGGCAGGCGTGGGGGAGCCTCGACGCTTTGGTGGGGCGGCTTCGAGCCGCTTTTGAAGAGAATGGAGGGAAGCCTGAAGCCAATCCATTTGGGGCTAGAGCTGTGAGGCTGTATCTTCGTGAGGTTCGTGATGTGCAGTCAAAGGCCAGAGGGATCAGCTACGACAAGAAAAGAAAGCGCCCACCATCTCAACACCCCTTGCCTCCTCCTCACGCTGCACCTTCATGA

Protein sequence

MDFSGSSSNSININNNNNNNIAMNHQHSATASSSSSRYENQKRRDWKTFGQYLNNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDVQSKARGISYDKKRKRPPSQHPLPPPHAAPS

Homology

[Close]

BLAST of CmaCh02G017430 vs. ExPASy Swiss-Prot
Match: O82268 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 OS=Arabidopsis thaliana OX=3702 GN=LSH3 PE=1 SV=1)

HSP 1 Score: 256.1 bits (653), Expect = 2.9e-67
Identity = 124/162 (76.54%), Postives = 139/162 (85.80%), Query Frame = 0


Query: 7   SSNSININNNNNNNIAMNHQHSATASSSSSRYENQKRRDWKTFGQYLNNHRPPLALSRCS 66
           S+NS ++              S++ S++SSRYENQKRRDW TFGQYL NHRPPL+LSRCS
Sbjct: 24  SNNSSSVTGATGGEATQPLSSSSSPSANSSRYENQKRRDWNTFGQYLRNHRPPLSLSRCS 83

Query: 67  GAHVLEFLRYLDQFGKTKVHTPICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEE 126
           GAHVLEFLRYLDQFGKTKVHT IC FYG PNPPAPCPCPLRQAWGSLDAL+GRLRAAFEE
Sbjct: 84  GAHVLEFLRYLDQFGKTKVHTNICHFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEE 143

Query: 127 NGGKPEANPFGARAVRLYLREVRDVQSKARGISYDKKRKRPP 169
           NGGKPE NPFGARAVRLYLREVRD+QSKARG+SY+KK+++ P
Sbjct: 144 NGGKPETNPFGARAVRLYLREVRDMQSKARGVSYEKKKRKRP 185

[Close]

BLAST of CmaCh02G017430 vs. ExPASy Swiss-Prot
Match: Q9LW68 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LSH4 PE=1 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 4.2e-66
Identity = 137/193 (70.98%), Postives = 149/193 (77.20%), Query Frame = 0


Query: 1   MDFSGSSSNSININNNNNNNIAMNHQHSATASSSS-----------SRYENQKRRDWKTF 60
           MD       + N+++N N  IA     + T+SSSS           SRYENQKRRDW TF
Sbjct: 1   MDHIIGFMGTTNMSHNTNLMIAAAATTTTTSSSSSSSSGGSGTNQLSRYENQKRRDWNTF 60

Query: 61  GQYLNNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGLPNPPAPCPCPLRQA 120
           GQYL NHRPPL+LSRCSGAHVLEFLRYLDQFGKTKVHT +CPF+G PNPPAPC CPLRQA
Sbjct: 61  GQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQA 120

Query: 121 WGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDVQSKARGISYD-KKRKRPP 180
           WGSLDAL+GRLRAAFEENGG PE NPFGARAVRLYLREVRD Q+KARGISY+ KKRKRPP
Sbjct: 121 WGSLDALIGRLRAAFEENGGSPETNPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPP 180

Query: 181 SQHPLPPPHAAPS 182
              PLPP   A S
Sbjct: 181 P--PLPPAQPAIS 191

[Close]

BLAST of CmaCh02G017430 vs. ExPASy Swiss-Prot
Match: A2YG32 (Protein G1-like2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_24078 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 6.0e-65
Identity = 117/135 (86.67%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 36  SRYENQKRRDWKTFGQYLNNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGL 95
           SRYE+QKRRDW TFGQYL NHRPPL LSRCSGAHVLEFLRYLDQFGKTKVH   CPF+G 
Sbjct: 21  SRYESQKRRDWHTFGQYLRNHRPPLELSRCSGAHVLEFLRYLDQFGKTKVHAAGCPFFGH 80

Query: 96  PNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDVQSKA 155
           P+PPAPCPCPLRQAWGSLDALVGRLRAAFEE+GG+PEANPFGARAVRLYLREVRD Q+KA
Sbjct: 81  PSPPAPCPCPLRQAWGSLDALVGRLRAAFEEHGGRPEANPFGARAVRLYLREVRDSQAKA 140

Query: 156 RGISYDKK-RKRPPS 170
           RGI+Y+KK RKRPP+
Sbjct: 141 RGIAYEKKRRKRPPT 155

[Close]

BLAST of CmaCh02G017430 vs. ExPASy Swiss-Prot
Match: Q652I1 (Protein G1-like2 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L2 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 6.0e-65
Identity = 117/135 (86.67%), Postives = 126/135 (93.33%), Query Frame = 0


Query: 36  SRYENQKRRDWKTFGQYLNNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGL 95
           SRYE+QKRRDW TFGQYL NHRPPL LSRCSGAHVLEFLRYLDQFGKTKVH   CPF+G 
Sbjct: 21  SRYESQKRRDWHTFGQYLRNHRPPLELSRCSGAHVLEFLRYLDQFGKTKVHAAGCPFFGH 80

Query: 96  PNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDVQSKA 155
           P+PPAPCPCPLRQAWGSLDALVGRLRAAFEE+GG+PEANPFGARAVRLYLREVRD Q+KA
Sbjct: 81  PSPPAPCPCPLRQAWGSLDALVGRLRAAFEEHGGRPEANPFGARAVRLYLREVRDSQAKA 140

Query: 156 RGISYDKK-RKRPPS 170
           RGI+Y+KK RKRPP+
Sbjct: 141 RGIAYEKKRRKRPPT 155

[Close]

BLAST of CmaCh02G017430 vs. ExPASy Swiss-Prot
Match: A2XAV5 (Protein G1-like6 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_09389 PE=3 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 1.0e-64
Identity = 120/167 (71.86%), Postives = 140/167 (83.83%), Query Frame = 0


Query: 3   FSGSSSNSININNNNNNNIAMNHQHSATASSSSSRYENQKRRDWKTFGQYLNNHRPPLAL 62
           FSG+ S+S     +            +++S S SRYE+QKRRDW TFGQYL NHRPPL+L
Sbjct: 48  FSGAGSSSSGAGTSAGG--GGGGPSPSSSSPSLSRYESQKRRDWNTFGQYLRNHRPPLSL 107

Query: 63  SRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRA 122
           SRCSGAHVLEFL+Y+DQFGKTKVHTP+CPFYG PNPPAPCPCPLRQAWGSLDAL+GRLRA
Sbjct: 108 SRCSGAHVLEFLKYMDQFGKTKVHTPVCPFYGHPNPPAPCPCPLRQAWGSLDALIGRLRA 167

Query: 123 AFEENGGKPEANPFGARAVRLYLREVRDVQSKARGISYDKKRKRPPS 170
           A+EENGG PE NPFGARAVRLYLREVR+ Q++ARGISY+KK+++ PS
Sbjct: 168 AYEENGGTPEMNPFGARAVRLYLREVRETQARARGISYEKKKRKKPS 212

[Close]

BLAST of CmaCh02G017430 vs. TAIR 10
Match: AT2G31160.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 256.1 bits (653), Expect = 2.0e-68
Identity = 124/162 (76.54%), Postives = 139/162 (85.80%), Query Frame = 0


Query: 7   SSNSININNNNNNNIAMNHQHSATASSSSSRYENQKRRDWKTFGQYLNNHRPPLALSRCS 66
           S+NS ++              S++ S++SSRYENQKRRDW TFGQYL NHRPPL+LSRCS
Sbjct: 24  SNNSSSVTGATGGEATQPLSSSSSPSANSSRYENQKRRDWNTFGQYLRNHRPPLSLSRCS 83

Query: 67  GAHVLEFLRYLDQFGKTKVHTPICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEE 126
           GAHVLEFLRYLDQFGKTKVHT IC FYG PNPPAPCPCPLRQAWGSLDAL+GRLRAAFEE
Sbjct: 84  GAHVLEFLRYLDQFGKTKVHTNICHFYGHPNPPAPCPCPLRQAWGSLDALIGRLRAAFEE 143

Query: 127 NGGKPEANPFGARAVRLYLREVRDVQSKARGISYDKKRKRPP 169
           NGGKPE NPFGARAVRLYLREVRD+QSKARG+SY+KK+++ P
Sbjct: 144 NGGKPETNPFGARAVRLYLREVRDMQSKARGVSYEKKKRKRP 185

[Close]

BLAST of CmaCh02G017430 vs. TAIR 10
Match: AT3G23290.2 (Protein of unknown function (DUF640) )

HSP 1 Score: 252.3 bits (643), Expect = 3.0e-67
Identity = 137/193 (70.98%), Postives = 149/193 (77.20%), Query Frame = 0


Query: 1   MDFSGSSSNSININNNNNNNIAMNHQHSATASSSS-----------SRYENQKRRDWKTF 60
           MD       + N+++N N  IA     + T+SSSS           SRYENQKRRDW TF
Sbjct: 1   MDHIIGFMGTTNMSHNTNLMIAAAATTTTTSSSSSSSSGGSGTNQLSRYENQKRRDWNTF 60

Query: 61  GQYLNNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFYGLPNPPAPCPCPLRQA 120
           GQYL NHRPPL+LSRCSGAHVLEFLRYLDQFGKTKVHT +CPF+G PNPPAPC CPLRQA
Sbjct: 61  GQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKTKVHTHLCPFFGHPNPPAPCACPLRQA 120

Query: 121 WGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDVQSKARGISYD-KKRKRPP 180
           WGSLDAL+GRLRAAFEENGG PE NPFGARAVRLYLREVRD Q+KARGISY+ KKRKRPP
Sbjct: 121 WGSLDALIGRLRAAFEENGGSPETNPFGARAVRLYLREVRDSQAKARGISYEKKKRKRPP 180

Query: 181 SQHPLPPPHAAPS 182
              PLPP   A S
Sbjct: 181 P--PLPPAQPAIS 191

[Close]

BLAST of CmaCh02G017430 vs. TAIR 10
Match: AT5G28490.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 245.4 bits (625), Expect = 3.6e-65
Identity = 116/143 (81.12%), Postives = 125/143 (87.41%), Query Frame = 0


Query: 34  SSSRYENQKRRDWKTFGQYLNNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPFY 93
           SSSRYENQKRRDW TF QYL NHRPPL+L  CSGAHVLEFLRYLDQFGKTKVH   C F+
Sbjct: 22  SSSRYENQKRRDWNTFCQYLRNHRPPLSLPSCSGAHVLEFLRYLDQFGKTKVHHQNCAFF 81

Query: 94  GLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDVQS 153
           GLPNPPAPCPCPLRQAWGSLDAL+GRLRAA+EENGG PEANPFG+RAVRL+LREVRD Q+
Sbjct: 82  GLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGPPEANPFGSRAVRLFLREVRDFQA 141

Query: 154 KARGISYDKKRKRPPSQHPLPPP 177
           KARG+SY+KKRKR   Q P   P
Sbjct: 142 KARGVSYEKKRKRVNRQKPQTQP 164

[Close]

BLAST of CmaCh02G017430 vs. TAIR 10
Match: AT3G04510.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 238.8 bits (608), Expect = 3.4e-63
Identity = 119/173 (68.79%), Postives = 140/173 (80.92%), Query Frame = 0


Query: 14  NNNNNNNIAMNHQHSATASS--SSSRYENQKRRDWKTFGQYLNNHRPPLALSRCSGAHVL 73
           +NN N N +++ Q  ++ SS  SSSRYENQKRRDW TF QYL NH PPL+L+ CSGAHVL
Sbjct: 8   HNNRNPNTSLSTQTPSSFSSPPSSSRYENQKRRDWNTFCQYLRNHHPPLSLASCSGAHVL 67

Query: 74  EFLRYLDQFGKTKVHTPICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKP 133
           +FLRYLDQFGKTKVH   C F+GLPNPPAPCPCPLRQAWGSLDAL+GRLRAA+EENGG P
Sbjct: 68  DFLRYLDQFGKTKVHHQNCAFFGLPNPPAPCPCPLRQAWGSLDALIGRLRAAYEENGGAP 127

Query: 134 EANPFGARAVRLYLREVRDVQSKARGISYDKKRKR----------PPSQHPLP 175
           E +PFG+R+VR++LREVRD Q+K+RG+SY+KKRKR          P SQ PLP
Sbjct: 128 ETSPFGSRSVRIFLREVRDFQAKSRGVSYEKKRKRVNNKQITQSQPQSQPPLP 180

[Close]

BLAST of CmaCh02G017430 vs. TAIR 10
Match: AT1G07090.1 (Protein of unknown function (DUF640) )

HSP 1 Score: 227.3 bits (578), Expect = 1.0e-59
Identity = 103/138 (74.64%), Postives = 123/138 (89.13%), Query Frame = 0


Query: 33  SSSSRYENQKRRDWKTFGQYLNNHRPPLALSRCSGAHVLEFLRYLDQFGKTKVHTPICPF 92
           ++ SRYE+QKRRDW TF QYL NH+PPLALSRCSGAHV+EFL+YLDQFGKTKVH   CP+
Sbjct: 27  ATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIEFLKYLDQFGKTKVHVAACPY 86

Query: 93  YGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDVQ 152
           +G   PP+PC CPL+QAWGSLDAL+GRLRAA+EENGG+P++NPF ARAVR+YLREVR+ Q
Sbjct: 87  FGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPDSNPFAARAVRIYLREVRESQ 146

Query: 153 SKARGISYD-KKRKRPPS 170
           +KARGI Y+ KKRKRPP+
Sbjct: 147 AKARGIPYEKKKRKRPPT 164

The following BLAST results are available for this feature:

BLAST of CmaCh02G017430 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82268	2.9e-67	76.54	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
Q9LW68	4.2e-66	70.98	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
A2YG32	6.0e-65	86.67	Protein G1-like2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_24078 PE=3 SV=1	[more]
Q652I1	6.0e-65	86.67	Protein G1-like2 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L2 PE=1 SV=1	[more]
A2XAV5	1.0e-64	71.86	Protein G1-like6 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_09389 PE=3 SV=1	[more]

BLAST of CmaCh02G017430 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31160.1	2.0e-68	76.54	Protein of unknown function (DUF640)	[more]
AT3G23290.2	3.0e-67	70.98	Protein of unknown function (DUF640)	[more]
AT5G28490.1	3.6e-65	81.12	Protein of unknown function (DUF640)	[more]
AT3G04510.1	3.4e-63	68.79	Protein of unknown function (DUF640)	[more]
AT1G07090.1	1.0e-59	74.64	Protein of unknown function (DUF640)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 30..150 e-value: 5.7E-65 score: 217.2
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 37..164 score: 82.885216
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..181
None	No IPR available	PANTHER	PTHR31165:SF80	PROTEIN G1-LIKE6	coord: 10..170
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 10..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G017430.1	CmaCh02G017430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus