CmaCh02G017140 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G017140
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	WD repeat-containing protein 70
Location	Cma_Chr02: 9646319 .. 9650920 (-)
RNA-Seq Expression	CmaCh02G017140
Synteny	CmaCh02G017140

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTTCAGCGTTCGTTAATGGCGAAGGTATAGATAGATACACGATATCGTGTTTAGGGTGAACAAGAAAAAGCTTCTTTGGAAGAATATGGAGGACGAGGCGGAGATATACGATGGCATCAGAGCTCAATTCCCTCTCACATTCGGGAAGCAATCGAAAGCTCAGACCTCTCTCGAAGCCATCCATAACACCACTCGTCGTAACACTTCAGCGACTGTTTCAGAAAAATCTTCTTCCGCTCAGAATAACAATGGTCTCCCTTCTATCTCTTCCTCCTCCAAAGCCTGGCTCGACTCACTTCGCACTTCCAAAAACCCTAACACACATGTTTCGGGCGATTCTGAACCTAGTAAGATCACGCGTGACGTTGACGCTGACGAAGGTCCGAGGATTGGCCCGCCTCGCCCGCGCACGGAGTTGAAATTGAATGATGACAGCGATGACAACGATGATGATGATGCAATGGTTGGGCCTCCGCCGCCGCCGCCGCGTGGCGAGGGTTCGGATGATGATGAGGATGACGACGGGGAAATGATTGGACCACCACGTCCACCGCCGAGCTCGAATTTGGATGATTCGGATGCGGAGGAGGAAGAATATGAGGAGAATCGGTATCGAATTCCGCAGAGCAACGAGATTGTGCTCAAAGGACATACGAAGGTATGAATTACCCTAATTTCACCCTATTCAGCTTCTTGTTAATTTGTTTAATGCCCAAAACCAAGGAAAGAATGAACTTATTGTGCATTTTCAGTTGGCATCTCTAGATTTGGGGTATCGAAGTGTATAGGCTTGGCTTGTTTTCAATACCGAAGTAGCTTGAATTAGTCAAGTTGCTGAAGTTGGGTTTTGTGGAAATAATTTTGTTCTCTGCCTATTCCAAACATTCACTAGCTCTGCTTGACTTCTGGACGAATTTAATGAACCATTTTGAGCTGCTTATAGCTGAAGTATGAGTGTAAATTGAAGATTGTTTTCTTTTCCGACCTACTTTTTTGGTTTATATAGTTTTGTCAAGTGATTTCATTGTTATTGCTCTCCCAGGAGAGTGAACTTTCAAGAATAAGTCTTCAAGGACTTGCATTATGTTCAGAAGCATAGGAGTTTTAGGATGTTCGTTTTATCTTCAATTGGTTTTTCAGTAGGGTGATAGTACAAAAGATTCTGGAAAGATTAGAATATTAGCTCACTACAGCGTAGCTCAACAGGTCAAGGCGTATACCCTCGACTAAGAGGTCAAAGGTTCGAATCGCTCCACTCCATATGTTATTAAGCTAAAAAATATTCTACCAGAAAATCTATTTTTTCTTTTCAATATTGACATTCCAGCAAAATCCTGACCAGATAGTTAATAATTGTTGACATTAGGAGTTCCAAGTTAATAGGGCCTTGTTTGATAACTTTTATGAAATTACCTCCGGAACATGAGCAATTATCAGCAAGAGAAATACAAAAAGACGAGAAAAGAAATAACATAGTGTTGTAGTGGTTCGGATTATGGAAGGGGCCTAGATTTCATACATATTTACTTTTTAGCATGAGGTTTGGCTTTACCCGTAAACTGAAAGGTCAAAAGCTTGTATATTAATTTTGAATGATTTTTGACAGGTGGTTTCTGCTCTTGCTGTTGACCACACTGGGTCTAGAGTTCTTTCTGGTAGTTATGACTATACGGTACGTATGTATGACTTTCAAGGGATGAATTCTCGTTTGCAATCCTTCAGACAGCTGGAACCATTTGAAGGTCACCAAATTCGTAATCTTAGCTGGAGCCCATCTGCTGACCGCTTTTTGTGTGTGACGGGCTCAGCTCAAGCCAAGGTGCAGAATGAAGATTTTCAATTCTTGTACGAGCCTGTAGCTTATGGAAGTGTCTAGTATTTAACTAACGTTCATCTTACTGGCATTTCAGATTTATGACCGTGATGGACTTACTCTAGGAGAGTTTATGAAGGGTGATATGTATATACGTGATCTCAAGAACACTAAAGGGCACATATCTGGACTGACTTGTGGAGAATGGCATCCTAAAAATAAAGAGACGATTTTGACATCATCAGAAGATGGATCCCTGCGAATATGGGATGTAAATGACTTCAAAAGTCAAAAGCAGGTTGTCATTTTTCTCTAACTATTTCTGTTTCATTCTTCCTTGCCATTGCCGATTTGTAATGTATGCTGCTGAGGGTGTGGAACGGATCAAGACCTTTCATTTATGCTTGCGGTAAATCAATGTGTAGGTTATCAAACCAAAGTTGGCTAGGCCGGGAAGGATTCCAGTGACGACATGTGCTTGGGATCGTGAAGGAAAAAGCATCGTGGGTGGCATGGGTGATGGTTCTATTCAGGTCTCATTGATTTTCATCCCGATTCATTTCTCTTAGCACTTTACTTCAATGCTCCAAACTACATTTTAATTCTTGCTTCCCCCATATGGAGCTCTCTGTATTCTCGTCAGTTTCGTTCAGTTTGTTTTAAATTTACTTTGCCATCATATGCATTATCATCCTTGCTCTATGTTTTTGCAGATATGGAACCTTAAGCCTGGATGGGGAAGCAGGCCAGACATACACGTTGAAAATAGTCATTCGGACGATATCACTGCTCTTAAGTTTTCAAGTGATGGGACAATTTTACTGTCAAGAAGCCTTGATGGATCACTGAAGGTACGTCGTCAATGCATTTAGAGAATTCACTTTCACTTGTTTCTTTTTGTTCATTTGGCAACATCCTTCCTACTTATAATTGTATCCCGTTTCTCAGGTTTGGGATTTGCGCCAGATCAAAAAACCTCTCAAGGAGTTTGATGATCTCCCAAATAACTATGCCCAAACAAATATTGCATTTAGTCCTGATGAGCAACTCTTTCTGACTGGAACATCTGTCGAGAAAGAGAGCCAAACGGGCGGTCTGCTCTGCTTCTATGACAGGACAAAGCTGGAACTTGTTTCTAGGGTAGGGATATCCACTACTAGTGTTGTGCAGTGTGCTTGGCACTCAAAGCTAAATCAGGTAAGCTACTCATCATGTCGCATGAAATATTTTATATTCGTATTATTTTATAGTTTAAAAACGTGCGTGGTGGGCTCCAACTCGAGCATAGTTCAATTAATTAAGGCATTGTACCTTCAACCAGGAAGTCAGAGTTTTGAATATTCACCGTTACATGTGCTTGAAGATATATGTTTTATCCCGTGACCTAGAAGATACAGACATATCATCTTTTGGACTTACAAGCACACTAAATATGATGTCATTGAAGCTTACTCTTGTTTGATTTCTTTATCGTGAAATTGATTTCATTCATGATTTCAAGATGTATTTAACCTAAATCTTTGCTGAACATCGGCAATCTGTCCCGATGTGTAATGGCATTTTTCCATGGTGAACTGCCATGTTTCATCCCCAATATAGCCCCAAAACATTTTCCTATGCATGGATGGTTGTACTGGGGACAATTTTCTGTTCACATGTACATAAATATTTTAACGTTTGCACTCTGTATTTATGTTGTGCCCGAGCTAGGTCGATGCCAATAGAGGATGTCGTATTATTTAGTTTAAGATCTTTTCTACTCTGCAAGTTGTAACAACGCTATTTATTTTTCTTTTTTTGTCAAGATATTTGCTACTTCTGGAGACAAAAGCCAGGGAGGAACTCACATATTGTATGATCCAACACTAAGTGAGAGAGGAGCTCTAGTTTGTGTTGCCCGTGCACCAAGGAAAAAATCTGTTGATGATTTTGAGGCCAAACCTGTTATTCACAACCCGCATGCCCTGCCTTTATTTAGAGACGCACCGAGCCGAAAGCGACAGCGTGAGAAAATACTCAAGGACCCACTTAAGTCTCATAAACCCGAACTCCCGATTACTGGACCAGGCTTCGGAGGAAGGGTTGGTGTTACCCAAGGAAGCTTATTAACCCAGTATCTTATGAAGGTAACTGTCTTTCATTTTTCTTCAACTCAAATCACAGCTTTTTTTAGGGGAAAAACACAGCCTTTTGTACTCTGTTTGCTGTTGGAGCTGGGAATGAATTGATTGTCTTGCATCATTATAGCAAGGAGGCATGATTAAGGAGACATGGATGGAGGAAGATCCAAGAGAAGCCATTCTGAAGTATGCTGATGTTGCAGCAAAGGATCCAAAGTTCATTGCACCTGCGTATTCGCATACTCAACCTGAACCTGTTTTTGCGAAGTCCGATTCCGAGGAGGAAGATAAATGATCTTATGCGATGCTTCTTCTCCTTGGGTTTGCTTGGCAGCTGTTGGGAGATGAAAAATTGAAGATGGTTGACTGCTGTAGATCCTTCGGCTCACGACGGGGTTCGAGTTTTGCCAGTCCCAGGTTCGATTTCATATAACAGCCTACTGTTAACAAGCAGTAGGAATTTAGGGTTGTTCCATTTTTAACTGTTGTAAGAAATGAGCTACAGAAGAGTGTATTCCTTGTGTACATTATTTGTGCAACACCATTGTCGTAGCTAAAAATATACAAGTTTGAGATGAATTTTTAAATGGTGATAGTTTTTTGTTTTTATATAATTTAAAGTATTTGGTTAAAAGTGAGTTTGAAAATTCTATAAATAATTTGAAAA

mRNA sequence

ATTTTCAGCGTTCGTTAATGGCGAAGGTATAGATAGATACACGATATCGTGTTTAGGGTGAACAAGAAAAAGCTTCTTTGGAAGAATATGGAGGACGAGGCGGAGATATACGATGGCATCAGAGCTCAATTCCCTCTCACATTCGGGAAGCAATCGAAAGCTCAGACCTCTCTCGAAGCCATCCATAACACCACTCGTCGTAACACTTCAGCGACTGTTTCAGAAAAATCTTCTTCCGCTCAGAATAACAATGGTCTCCCTTCTATCTCTTCCTCCTCCAAAGCCTGGCTCGACTCACTTCGCACTTCCAAAAACCCTAACACACATGTTTCGGGCGATTCTGAACCTAGTAAGATCACGCGTGACGTTGACGCTGACGAAGGTCCGAGGATTGGCCCGCCTCGCCCGCGCACGGAGTTGAAATTGAATGATGACAGCGATGACAACGATGATGATGATGCAATGGTTGGGCCTCCGCCGCCGCCGCCGCGTGGCGAGGGTTCGGATGATGATGAGGATGACGACGGGGAAATGATTGGACCACCACGTCCACCGCCGAGCTCGAATTTGGATGATTCGGATGCGGAGGAGGAAGAATATGAGGAGAATCGGTATCGAATTCCGCAGAGCAACGAGATTGTGCTCAAAGGACATACGAAGGTGGTTTCTGCTCTTGCTGTTGACCACACTGGGTCTAGAGTTCTTTCTGGTAGTTATGACTATACGGTACGTATGTATGACTTTCAAGGGATGAATTCTCGTTTGCAATCCTTCAGACAGCTGGAACCATTTGAAGGTCACCAAATTCGTAATCTTAGCTGGAGCCCATCTGCTGACCGCTTTTTGTGTGTGACGGGCTCAGCTCAAGCCAAGATTTATGACCGTGATGGACTTACTCTAGGAGAGTTTATGAAGGGTGATATGTATATACGTGATCTCAAGAACACTAAAGGGCACATATCTGGACTGACTTGTGGAGAATGGCATCCTAAAAATAAAGAGACGATTTTGACATCATCAGAAGATGGATCCCTGCGAATATGGGATGTAAATGACTTCAAAAGTCAAAAGCAGGTTATCAAACCAAAGTTGGCTAGGCCGGGAAGGATTCCAGTGACGACATGTGCTTGGGATCGTGAAGGAAAAAGCATCGTGGGTGGCATGGGTGATGGTTCTATTCAGATATGGAACCTTAAGCCTGGATGGGGAAGCAGGCCAGACATACACGTTGAAAATAGTCATTCGGACGATATCACTGCTCTTAAGTTTTCAAGTGATGGGACAATTTTACTGTCAAGAAGCCTTGATGGATCACTGAAGGTTTGGGATTTGCGCCAGATCAAAAAACCTCTCAAGGAGTTTGATGATCTCCCAAATAACTATGCCCAAACAAATATTGCATTTAGTCCTGATGAGCAACTCTTTCTGACTGGAACATCTGTCGAGAAAGAGAGCCAAACGGGCGGTCTGCTCTGCTTCTATGACAGGACAAAGCTGGAACTTGTTTCTAGGGTAGGGATATCCACTACTAGTGTTGTGCAGTGTGCTTGGCACTCAAAGCTAAATCAGATATTTGCTACTTCTGGAGACAAAAGCCAGGGAGGAACTCACATATTGTATGATCCAACACTAAGTGAGAGAGGAGCTCTAGTTTGTGTTGCCCGTGCACCAAGGAAAAAATCTGTTGATGATTTTGAGGCCAAACCTGTTATTCACAACCCGCATGCCCTGCCTTTATTTAGAGACGCACCGAGCCGAAAGCGACAGCGTGAGAAAATACTCAAGGACCCACTTAAGTCTCATAAACCCGAACTCCCGATTACTGGACCAGGCTTCGGAGGAAGGGTTGGTGTTACCCAAGGAAGCTTATTAACCCAGTATCTTATGAAGCAAGGAGGCATGATTAAGGAGACATGGATGGAGGAAGATCCAAGAGAAGCCATTCTGAAGTATGCTGATGTTGCAGCAAAGGATCCAAAGTTCATTGCACCTGCGTATTCGCATACTCAACCTGAACCTGTTTTTGCGAAGTCCGATTCCGAGGAGGAAGATAAATGATCTTATGCGATGCTTCTTCTCCTTGGGTTTGCTTGGCAGCTGTTGGGAGATGAAAAATTGAAGATGGTTGACTGCTGTAGATCCTTCGGCTCACGACGGGGTTCGAGTTTTGCCAGTCCCAGGTTCGATTTCATATAACAGCCTACTGTTAACAAGCAGTAGGAATTTAGGGTTGTTCCATTTTTAACTGTTGTAAGAAATGAGCTACAGAAGAGTGTATTCCTTGTGTACATTATTTGTGCAACACCATTGTCGTAGCTAAAAATATACAAGTTTGAGATGAATTTTTAAATGGTGATAGTTTTTTGTTTTTATATAATTTAAAGTATTTGGTTAAAAGTGAGTTTGAAAATTCTATAAATAATTTGAAAA

Coding sequence (CDS)

ATGGAGGACGAGGCGGAGATATACGATGGCATCAGAGCTCAATTCCCTCTCACATTCGGGAAGCAATCGAAAGCTCAGACCTCTCTCGAAGCCATCCATAACACCACTCGTCGTAACACTTCAGCGACTGTTTCAGAAAAATCTTCTTCCGCTCAGAATAACAATGGTCTCCCTTCTATCTCTTCCTCCTCCAAAGCCTGGCTCGACTCACTTCGCACTTCCAAAAACCCTAACACACATGTTTCGGGCGATTCTGAACCTAGTAAGATCACGCGTGACGTTGACGCTGACGAAGGTCCGAGGATTGGCCCGCCTCGCCCGCGCACGGAGTTGAAATTGAATGATGACAGCGATGACAACGATGATGATGATGCAATGGTTGGGCCTCCGCCGCCGCCGCCGCGTGGCGAGGGTTCGGATGATGATGAGGATGACGACGGGGAAATGATTGGACCACCACGTCCACCGCCGAGCTCGAATTTGGATGATTCGGATGCGGAGGAGGAAGAATATGAGGAGAATCGGTATCGAATTCCGCAGAGCAACGAGATTGTGCTCAAAGGACATACGAAGGTGGTTTCTGCTCTTGCTGTTGACCACACTGGGTCTAGAGTTCTTTCTGGTAGTTATGACTATACGGTACGTATGTATGACTTTCAAGGGATGAATTCTCGTTTGCAATCCTTCAGACAGCTGGAACCATTTGAAGGTCACCAAATTCGTAATCTTAGCTGGAGCCCATCTGCTGACCGCTTTTTGTGTGTGACGGGCTCAGCTCAAGCCAAGATTTATGACCGTGATGGACTTACTCTAGGAGAGTTTATGAAGGGTGATATGTATATACGTGATCTCAAGAACACTAAAGGGCACATATCTGGACTGACTTGTGGAGAATGGCATCCTAAAAATAAAGAGACGATTTTGACATCATCAGAAGATGGATCCCTGCGAATATGGGATGTAAATGACTTCAAAAGTCAAAAGCAGGTTATCAAACCAAAGTTGGCTAGGCCGGGAAGGATTCCAGTGACGACATGTGCTTGGGATCGTGAAGGAAAAAGCATCGTGGGTGGCATGGGTGATGGTTCTATTCAGATATGGAACCTTAAGCCTGGATGGGGAAGCAGGCCAGACATACACGTTGAAAATAGTCATTCGGACGATATCACTGCTCTTAAGTTTTCAAGTGATGGGACAATTTTACTGTCAAGAAGCCTTGATGGATCACTGAAGGTTTGGGATTTGCGCCAGATCAAAAAACCTCTCAAGGAGTTTGATGATCTCCCAAATAACTATGCCCAAACAAATATTGCATTTAGTCCTGATGAGCAACTCTTTCTGACTGGAACATCTGTCGAGAAAGAGAGCCAAACGGGCGGTCTGCTCTGCTTCTATGACAGGACAAAGCTGGAACTTGTTTCTAGGGTAGGGATATCCACTACTAGTGTTGTGCAGTGTGCTTGGCACTCAAAGCTAAATCAGATATTTGCTACTTCTGGAGACAAAAGCCAGGGAGGAACTCACATATTGTATGATCCAACACTAAGTGAGAGAGGAGCTCTAGTTTGTGTTGCCCGTGCACCAAGGAAAAAATCTGTTGATGATTTTGAGGCCAAACCTGTTATTCACAACCCGCATGCCCTGCCTTTATTTAGAGACGCACCGAGCCGAAAGCGACAGCGTGAGAAAATACTCAAGGACCCACTTAAGTCTCATAAACCCGAACTCCCGATTACTGGACCAGGCTTCGGAGGAAGGGTTGGTGTTACCCAAGGAAGCTTATTAACCCAGTATCTTATGAAGCAAGGAGGCATGATTAAGGAGACATGGATGGAGGAAGATCCAAGAGAAGCCATTCTGAAGTATGCTGATGTTGCAGCAAAGGATCCAAAGTTCATTGCACCTGCGTATTCGCATACTCAACCTGAACCTGTTTTTGCGAAGTCCGATTCCGAGGAGGAAGATAAATGA

Protein sequence

MEDEAEIYDGIRAQFPLTFGKQSKAQTSLEAIHNTTRRNTSATVSEKSSSAQNNNGLPSISSSSKAWLDSLRTSKNPNTHVSGDSEPSKITRDVDADEGPRIGPPRPRTELKLNDDSDDNDDDDAMVGPPPPPPRGEGSDDDEDDDGEMIGPPRPPPSSNLDDSDAEEEEYEENRYRIPQSNEIVLKGHTKVVSALAVDHTGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQIRNLSWSPSADRFLCVTGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHISGLTCGEWHPKNKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLARPGRIPVTTCAWDREGKSIVGGMGDGSIQIWNLKPGWGSRPDIHVENSHSDDITALKFSSDGTILLSRSLDGSLKVWDLRQIKKPLKEFDDLPNNYAQTNIAFSPDEQLFLTGTSVEKESQTGGLLCFYDRTKLELVSRVGISTTSVVQCAWHSKLNQIFATSGDKSQGGTHILYDPTLSERGALVCVARAPRKKSVDDFEAKPVIHNPHALPLFRDAPSRKRQREKILKDPLKSHKPELPITGPGFGGRVGVTQGSLLTQYLMKQGGMIKETWMEEDPREAILKYADVAAKDPKFIAPAYSHTQPEPVFAKSDSEEEDK

Homology

[Close]

BLAST of CmaCh02G017140 vs. ExPASy Swiss-Prot
Match: Q6GPP0 (WD repeat-containing protein 70 OS=Xenopus laevis OX=8355 GN=wdr70 PE=2 SV=2)

HSP 1 Score: 424.1 bits (1089), Expect = 2.9e-117
Identity = 231/551 (41.92%), Postives = 336/551 (60.98%), Query Frame = 0


Query: 108 RTELKLNDDSDDNDDDDAMVGPPPPPPRGEGSDDDEDDDGEMIGPPRPPPSSNLDDSDAE 167
           +T+   +    ++  DD ++GPP PP      +   D   E+IGPP PP   + DD D E
Sbjct: 73  KTKASGSSSGSEDSSDDELIGPPLPP------NVTGDHGDELIGPPLPPGYKDSDDEDDE 132

Query: 168 EEEYEENRYR-IPQSNEIVLKGHTKVVSALAVDHTGSRVLSGSYDYTVRMYDFQGMNSRL 227
           E E ++N  + IP S+EI L+  TK VSAL +D +G+R+++G YDY VR +DF GM++ L
Sbjct: 133 EHEDDDNPVKDIPDSHEITLQHGTKTVSALGLDPSGARLVTGGYDYDVRFWDFAGMDASL 192

Query: 228 QSFRQLEPFEGHQIRNLSWSPSADRFLCVTGSAQAKIYDRDGLTLGEFMKGDMYIRDLKN 287
           Q+FR L+P E HQI++L +S + D  L V G++QAK+ DRDG  + E +KGD YI D+ N
Sbjct: 193 QAFRSLQPCECHQIKSLQYSNTGDVILVVAGNSQAKVLDRDGFPVMECVKGDQYIVDMAN 252

Query: 288 TKGHISGLTCGEWHPKNKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLARPGRIPVTTC 347
           TKGH + L  G WHPK KE  +T S DG++R WDV++ K  K + KP+  +   +  T C
Sbjct: 253 TKGHTAMLNGGCWHPKIKEEFMTCSNDGTVRTWDVSNEKKHKGIFKPRSVQGKPVIPTCC 312

Query: 348 AWDREGKSIVGGMGDGSIQIWNLKPGWGSRPDIHVENSHSDDITALKFSSDGTILLSRSL 407
            + R+GK I  G  DGSIQIW+      ++      ++   D + + FS  G +L +R  
Sbjct: 313 TYSRDGKFIAAGCQDGSIQIWDRNMSVHTKFHCRQAHTPGTDTSCVTFSYGGNVLATRGG 372

Query: 408 DGSLKVWDLRQIKKPLKEFDDLPNNYAQTNIAFSPDEQLFLTGTSVEKESQTGGLLCFYD 467
           D +LK WD+R+ K PL     L N +  T+  FSPD++L +TGTSV++    G LL F+D
Sbjct: 373 DDTLKTWDIRKFKNPLNVASGLENFFPMTDCCFSPDDKLLITGTSVKRGIGDGKLL-FFD 432

Query: 468 RTKLELVSRVGISTTSVVQCAWHSKLNQIFATSGDKSQGGTHILYDPTLSERGALVCVAR 527
               + +  + ++  SVV+C WH KLNQI   +G+   G   + YDP  S+RGA +CV +
Sbjct: 433 VVTFQKIYEIQVTEASVVRCLWHPKLNQIMVGTGN---GLAKVYYDPNRSQRGAKLCVVK 492

Query: 528 APRKKSVDDFEAKPVIHNPHALPLFRDAPSR--KRQREKILKDPLKSHKPELPITGPGFG 587
             RK+   +   +  I  PHALP+FR+   R  ++Q EK   DP+KSHKPE P+ GPG G
Sbjct: 493 TQRKERQAETLTQDYIITPHALPMFREPRQRSTRKQLEKDRLDPVKSHKPEPPVAGPGRG 552

Query: 588 GRVGVTQGSLLTQYLMKQGGMIKETWMEEDPREAILKYADVAAKDPKFIAPAYSHTQPEP 647
           GRVG T G  L+ +++K   + K    + + REAIL++A  A ++P ++APAYS TQP  
Sbjct: 553 GRVG-THGGTLSSFIVKNIALDKTD--DSNAREAILRHAKDAEQNPYWVAPAYSKTQPNT 610

Query: 648 VFAKSDSEEED 656
           VFA+ DS+EE+
Sbjct: 613 VFAEVDSDEEE 610

[Close]

BLAST of CmaCh02G017140 vs. ExPASy Swiss-Prot
Match: Q9NW82 (WD repeat-containing protein 70 OS=Homo sapiens OX=9606 GN=WDR70 PE=1 SV=1)

HSP 1 Score: 420.6 bits (1080), Expect = 3.2e-116
Identity = 251/645 (38.91%), Postives = 375/645 (58.14%), Query Frame = 0


Query: 19  FGKQSKAQTSLEAIHNTTRRNTSATVSEKSSSAQNNNGLPSISSSSKAWLDSLRTSKNPN 78
           FGK+++    LEA+   TRR T+   S K+  A+            +  ++  +  +  N
Sbjct: 30  FGKKART-FDLEAMFEQTRR-TAVERSRKTLEAR----------EKEEEMNREKELRRQN 89

Query: 79  THVSGDSEPSKITRDVDADEGPRIGPPRPRTELKLNDDSDDNDDDDAMVGPPPPPPR-GE 138
             +   S  S + RD            R  +  +    SD +DD+  ++GPP PP   G+
Sbjct: 90  EDIEPTSSRSNVVRDCSKSSS------RDTSSSESEQSSDSSDDE--LIGPPLPPKMVGK 149

Query: 139 GSDDDEDDDGEMIGPPRPPPSSNLDDSDAEEEEYEENR---YRIPQSNEIVLKGHTKVVS 198
             +  E+D   ++GP  PP +   ++++ EEEE EE     ++IP S+EI LK  TK VS
Sbjct: 150 PVNFMEED---ILGPLPPPLNEEEEEAEEEEEEEEEEENPVHKIPDSHEITLKHGTKTVS 209

Query: 199 ALAVDHTGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQIRNLSWSPSADRFLC 258
           AL +D +G+R+++G YDY V+ +DF GM++  ++FR L+P E HQI++L +S + D  L 
Sbjct: 210 ALGLDPSGARLVTGGYDYDVKFWDFAGMDASFKAFRSLQPCECHQIKSLQYSNTGDMILV 269

Query: 259 VTGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHISGLTCGEWHPKNKETILTSSEDG 318
           V+GS+QAK+ DRDG  + E +KGD YI D+ NTKGH + L  G WHPK K   +T S D 
Sbjct: 270 VSGSSQAKVIDRDGFEVMECIKGDQYIVDMANTKGHTAMLHTGSWHPKIKGEFMTCSNDA 329

Query: 319 SLRIWDVNDFKSQKQVIKPKLARPGRIPVTTCAWDREGKSIVGGMGDGSIQIWNLKPGWG 378
           ++R W+V + K QK V KP+  +  ++  TTC + R+G  I     +GSIQIW+      
Sbjct: 330 TVRTWEVENPKKQKSVFKPRTMQGKKVIPTTCTYSRDGNLIAAACQNGSIQIWD--RNLT 389

Query: 379 SRPDIHVENSHSD--DITALKFSSDGTILLSRSLDGSLKVWDLRQIKKPLKEFDDLPNNY 438
             P  H + +H    D + + FS DG +L SR  D SLK+WD+RQ  KPL     LP  +
Sbjct: 390 VHPKFHYKQAHDSGTDTSCVTFSYDGNVLASRGGDDSLKLWDIRQFNKPLFSASGLPTMF 449

Query: 439 AQTNIAFSPDEQLFLTGTSVEKESQTGGLLCFYDRTKLELVSRVGISTTSVVQCAWHSKL 498
             T+  FSPD++L +TGTS+++   +G L+ F++R   + V  + I+  SVV+C WH KL
Sbjct: 450 PMTDCCFSPDDKLIVTGTSIQRGCGSGKLV-FFERRTFQRVYEIDITDASVVRCLWHPKL 509

Query: 499 NQIFATSGDKSQGGTHILYDPTLSERGALVCVARAPRKKSVDDFEAKPVIHNPHALPLFR 558
           NQI   +G+   G   + YDP  S+RGA +CV +  RK    +   +  I  PHALP+FR
Sbjct: 510 NQIMVGTGN---GLAKVYYDPNKSQRGAKLCVVKTQRKAKQAETLTQDYIITPHALPMFR 569

Query: 559 DAPSR--KRQREKILKDPLKSHKPELPITGPGFGGRVGVTQGSLLTQYLMKQGGMIKETW 618
           +   R  ++Q EK   DPLKSHKPE P+ GPG GGRVG T G  L+ Y++K   + K   
Sbjct: 570 EPRQRSTRKQLEKDRLDPLKSHKPEPPVAGPGRGGRVG-THGGTLSSYIVKNIALDKTD- 629

Query: 619 MEEDPREAILKYADVAAKDPKFIAPAYSHTQPEPVFAKSDSEEED 656
            + +PREAIL++A  A   P +++PAYS TQP+ +FA+ +S++E+
Sbjct: 630 -DSNPREAILRHAKAAEDSPYWVSPAYSKTQPKTMFAQVESDDEE 642

[Close]

BLAST of CmaCh02G017140 vs. ExPASy Swiss-Prot
Match: Q5EB92 (WD repeat-containing protein 70 OS=Rattus norvegicus OX=10116 GN=Wdr70 PE=1 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 4.2e-116
Identity = 252/645 (39.07%), Postives = 377/645 (58.45%), Query Frame = 0


Query: 19  FGKQSKAQTSLEAIHNTTRRNTSATVSEKSSSAQNNNGLPSISSSSKAWLDSLRTSKNPN 78
           FGK+++    LEA+   TRR T+   S K+  A+      +     +  L+ +  + + +
Sbjct: 30  FGKKART-FDLEAMFEQTRR-TAVERSRKTLEAREKEEEMNREKELRKQLEDIEPTPSSS 89

Query: 79  THVSGDSEPSKITRDVDADEGPRIGPPRPRTELKLNDDSDDNDDDDAMVGPPPPPPRGEG 138
           + V   S+ S  +RD  + +                 D      DD ++GPP PP    G
Sbjct: 90  SAVRERSKSS--SRDTSSSD----------------SDHSSGSSDDELIGPPLPPEMVGG 149

Query: 139 SDDDEDDDGEMIGPPRPP---PSSNLDDSDAEEEEYEENR-YRIPQSNEIVLKGHTKVVS 198
             +  D+D  ++GP  PP      + DD D E+E  E+N  +RIP S+EI LK  TK VS
Sbjct: 150 PVNTVDED--ILGPLPPPLCEEGEDDDDDDLEDEGEEDNPIHRIPDSHEITLKHGTKTVS 209

Query: 199 ALAVDHTGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQIRNLSWSPSADRFLC 258
           AL +D +G+R+++G YDY V+ +DF GM++  ++FR L+P E HQI++L +S + D  L 
Sbjct: 210 ALGLDPSGARLVTGGYDYDVKFWDFAGMDASFKAFRSLQPCECHQIKSLQYSNTGDMILV 269

Query: 259 VTGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHISGLTCGEWHPKNKETILTSSEDG 318
           V+GS+QAK+ DRDG  + E +KGD YI D+ NTKGH + L  G WHPK K   +T S D 
Sbjct: 270 VSGSSQAKVIDRDGFEVMECIKGDQYIVDMANTKGHTAMLHTGSWHPKIKGEFMTCSNDA 329

Query: 319 SLRIWDVNDFKSQKQVIKPKLARPGRIPVTTCAWDREGKSIVGGMGDGSIQIWNLKPGWG 378
           ++R+W+V + K QK V KP+  +  ++  TTC + R+G  +     +GSIQIW+      
Sbjct: 330 TVRLWEVENPKKQKSVFKPRTMQGKKVIPTTCTYSRDGNLVAAACQNGSIQIWD--RNLT 389

Query: 379 SRPDIHVENSHS--DDITALKFSSDGTILLSRSLDGSLKVWDLRQIKKPLKEFDDLPNNY 438
             P  H + +H+   D + + FS DG +L SR  D +LK+WD+RQ  KPL    DLP  +
Sbjct: 390 VHPKFHYKQAHAPGTDTSCVAFSYDGNVLASRGGDDTLKLWDVRQFNKPLFSASDLPTLF 449

Query: 439 AQTNIAFSPDEQLFLTGTSVEKESQTGGLLCFYDRTKLELVSRVGISTTSVVQCAWHSKL 498
             T+  FSPD++L +TGTSV++   +G L+ F++R   + V  + I+  SVV+C WH KL
Sbjct: 450 PMTDCCFSPDDKLIVTGTSVQRGCGSGKLV-FFERRTFQRVYEIHITDASVVRCLWHPKL 509

Query: 499 NQIFATSGDKSQGGTHILYDPTLSERGALVCVARAPRKKSVDDFEAKPVIHNPHALPLFR 558
           NQI   +G+   G   + YDP  S+RGA +CV +  RK    +   +  I  PHALP+FR
Sbjct: 510 NQIMVGTGN---GLAKVYYDPNKSQRGAKLCVVKTQRKAKQAETLTQDYIITPHALPMFR 569

Query: 559 DAPSR--KRQREKILKDPLKSHKPELPITGPGFGGRVGVTQGSLLTQYLMKQGGMIKETW 618
           +   R  ++Q EK   DPLKSHKPE P+ GPG GGRVG T G  L+ Y++K   + K   
Sbjct: 570 EPRQRSTRKQLEKDRLDPLKSHKPEPPVAGPGRGGRVG-THGGTLSSYIVKNIALDKTD- 629

Query: 619 MEEDPREAILKYADVAAKDPKFIAPAYSHTQPEPVFAKSDSEEED 656
            + +PREAIL++A  A  +P +++PAYS TQP+ +FA+ +S++E+
Sbjct: 630 -DSNPREAILRHAKAAEDNPYWVSPAYSKTQPKTMFAQVESDDEE 643

[Close]

BLAST of CmaCh02G017140 vs. ExPASy Swiss-Prot
Match: Q0VA16 (WD repeat-containing protein 70 OS=Xenopus tropicalis OX=8364 GN=wdr70 PE=2 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 9.3e-116
Identity = 254/640 (39.69%), Postives = 366/640 (57.19%), Query Frame = 0


Query: 19  FGKQSKAQTSLEAIHNTTRRNTSATVSEKSSSAQNNNGLPSISSSSKAWLDSLRTSKNPN 78
           FGK+++    LEA+   TRR T+   S+K+  A+       IS+ S    D   +S+  N
Sbjct: 18  FGKKART-FDLEAMFEQTRR-TAVERSKKTLEAREKE--EQISNKSPVMKDVPSSSRQKN 77

Query: 79  THVSGDSEPSKITRDVDADEGPRIGPPRPRTELKLNDDSDDNDDDDAMVGPPPPPPRGEG 138
           T  S  S  S                              ++  DD ++GPP P      
Sbjct: 78  TDTSSSSSGS------------------------------EDSSDDELIGPPVP------ 137

Query: 139 SDDDEDDDGEMIGPPRPPPSSNLDDSDAEEEEYEENRYR-IPQSNEIVLKGHTKVVSALA 198
           S+   D   E+IGPP P    + DD D E+ E ++N  + IP S+EI L+  TK VSAL 
Sbjct: 138 SNLTGDHGDELIGPPLPSGYKDSDDEDEEQHEDDDNPVKGIPDSHEITLQHGTKTVSALG 197

Query: 199 VDHTGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQIRNLSWSPSADRFLCVTG 258
           +D +G+R+++G +DY VR +DF GM++ LQ+FR L+P E HQI++L +S + D  L V G
Sbjct: 198 LDPSGARLVTGGFDYDVRFWDFAGMDASLQAFRSLQPCECHQIKSLQYSNTGDVILVVAG 257

Query: 259 SAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHISGLTCGEWHPKNKETILTSSEDGSLR 318
           ++QAK+ DRDG  + E +KGD YI D+ NTKGH + L  G WHPK KE  +T S DG++R
Sbjct: 258 NSQAKVLDRDGFPVMECVKGDQYIVDMANTKGHTAMLNGGCWHPKIKEEFMTCSNDGTVR 317

Query: 319 IWDVNDFKSQKQVIKPKLARPGRIPVTTCAWDREGKSIVGGMGDGSIQIWNLKPGWGSRP 378
            WDV++ K  K V KP+  +  R+  T C + R+GK I  G  DGSIQIW+      ++ 
Sbjct: 318 TWDVSNEKKHKGVFKPRSMQGKRVIPTCCTYSRDGKFIAAGCQDGSIQIWDRNMSVHTKF 377

Query: 379 DIHVENSHSDDITALKFSSDGTILLSRSLDGSLKVWDLRQIKKPLKEFDDLPNNYAQTNI 438
                ++   D + + FS  G IL +R  D +LK WD+R+ K PL     L N +  T+ 
Sbjct: 378 HCRQAHTPGTDTSCVTFSYAGNILATRGGDDTLKTWDIRKFKNPLNVASGLANYFPMTDC 437

Query: 439 AFSPDEQLFLTGTSVEKESQTGGLLCFYDRTKLELVSRVGISTTSVVQCAWHSKLNQIFA 498
            FSPD++L +TGTSV++    G L+ F+D    + V  + ++  SVV+C WH KLNQI  
Sbjct: 438 CFSPDDKLLITGTSVKRGGGDGKLM-FFDVGTFQKVYEIQVTEASVVRCLWHPKLNQIMV 497

Query: 499 TSGDKSQGGTHILYDPTLSERGALVCVARAPRKKSVDDFEAKPVIHNPHALPLFRDAPSR 558
            +G+   G   + YDP  S+RGA +CV +  RK    +   +  I  PHALP+FR+   R
Sbjct: 498 GTGN---GLAKVYYDPNRSQRGAKLCVVKTQRKARQAETLTQDYIITPHALPMFREPRQR 557

Query: 559 --KRQREKILKDPLKSHKPELPITGPGFGGRVGVTQGSLLTQYLMKQGGMIKETWMEEDP 618
             ++Q EK   DP+KSHKPE P+ GPG GGRVG T G  L+ +++K   + K    + +P
Sbjct: 558 STRKQLEKDRLDPVKSHKPEPPVAGPGRGGRVG-THGGTLSSFIVKNIALDKTD--DSNP 610

Query: 619 REAILKYADVAAKDPKFIAPAYSHTQPEPVFAKSDSEEED 656
           REAIL++A  A K+P ++APAYS TQP  VFA+ +S+EE+
Sbjct: 618 REAILRHAKDAEKNPYWVAPAYSKTQPNTVFAEVESDEEE 610

[Close]

BLAST of CmaCh02G017140 vs. ExPASy Swiss-Prot
Match: Q32LB0 (WD repeat-containing protein 70 OS=Bos taurus OX=9913 GN=WDR70 PE=2 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 3.0e-114
Identity = 258/656 (39.33%), Postives = 380/656 (57.93%), Query Frame = 0


Query: 19  FGKQSKAQTSLEAIHNTTRRNTSATVSEKSSSA---------------QNNNGLPSISSS 78
           FGK+++    LEA+   TRR T+   S K+  A               QN +  P+ S S
Sbjct: 28  FGKKART-FDLEAMFEQTRR-TAVERSRKTLEAREREEEMNREKELRRQNEDLEPTSSGS 87

Query: 79  SKAWLDSLRTSKNPNTHVSGDSEPSKITRDVDADEGPRIGPPRPRTELKLNDDSDDNDDD 138
           + A   S  +S++ ++  S +S         D+ +   IGPP P   LK+ ++   N  +
Sbjct: 88  NVARACSKSSSRDTSSSESDESS--------DSSDDELIGPPLP---LKMVEE-PVNPME 147

Query: 139 DAMVGPPPPPPRGEGSDDDEDDDGEMIGPPRPPPSSNLDDSDAEEEEYEENRYRIPQSNE 198
           + ++GP PPP      D +E+DD               DD D+EEEE      +IP S+E
Sbjct: 148 EGVLGPLPPP---LAEDVEEEDD---------------DDGDSEEEENPVR--KIPDSHE 207

Query: 199 IVLKGHTKVVSALAVDHTGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQIRNL 258
           I +K  TK VSAL +D +G+R+++G YDY V+ +DF GM++  ++FR L+P E HQI++L
Sbjct: 208 ITIKHGTKTVSALGLDPSGARLVTGGYDYDVKFWDFAGMDASFKAFRSLQPCECHQIKSL 267

Query: 259 SWSPSADRFLCVTGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHISGLTCGEWHPKN 318
            +S + D  L V+GS+QAK+ DRDG  + E +KGD YI D+ NTKGH + L  G WHPK 
Sbjct: 268 QYSNTGDMILVVSGSSQAKVIDRDGFEVMECIKGDQYIVDMANTKGHTAMLHTGSWHPKI 327

Query: 319 KETILTSSEDGSLRIWDVNDFKSQKQVIKPKLARPGRIPVTTCAWDREGKSIVGGMGDGS 378
           K   +T S D ++R W+V + K QK V KP+  +  ++  TTC + R+G  I     +GS
Sbjct: 328 KGEFMTCSNDATVRTWEVENPKKQKSVFKPRTMQGKKVIPTTCTYSRDGSLIAAACQNGS 387

Query: 379 IQIWNLKPGWGSRPDIHVENSH--SDDITALKFSSDGTILLSRSLDGSLKVWDLRQIKKP 438
           IQIW+        P  H + +H    D + + FS DGT+L SR  D +LK+WD+RQ  KP
Sbjct: 388 IQIWD--RNLTVHPKFHYKQAHDPGTDTSCVTFSYDGTVLASRGGDDTLKLWDIRQFNKP 447

Query: 439 LKEFDDLPNNYAQTNIAFSPDEQLFLTGTSVEKESQTGGLLCFYDRTKLELVSRVGISTT 498
           L     LP  +  T+  FSPD++L +TGTSV++   +G L+ F++R   + V  + I+  
Sbjct: 448 LFSASGLPTMFPMTDCCFSPDDKLIVTGTSVQRGCGSGKLV-FFERRTFQRVYEIDITDA 507

Query: 499 SVVQCAWHSKLNQIFATSGDKSQGGTHILYDPTLSERGALVCVARAPRKKSVDDFEAKPV 558
           SVV+C WH KLNQI   +G+   G   + YDP  S+RGA +CV +  RK    +   +  
Sbjct: 508 SVVRCLWHPKLNQIMVGTGN---GLAKVYYDPNKSQRGAKLCVVKTQRKAKQAETLTQDY 567

Query: 559 IHNPHALPLFRDAPSR--KRQREKILKDPLKSHKPELPITGPGFGGRVGVTQGSLLTQYL 618
           I  PHALP+FR+   R  ++Q EK   DPLKSHKPE P+ GPG GGRVG T G  L+ Y+
Sbjct: 568 IITPHALPMFREPRQRSTRKQLEKDRLDPLKSHKPEPPVAGPGRGGRVG-THGGTLSSYI 627

Query: 619 MKQGGMIKETWMEEDPREAILKYADVAAKDPKFIAPAYSHTQPEPVFAKSDSEEED 656
           +K   + K    + +PREAIL++A  A  +P +++PAYS TQP+ +FA+ +S++E+
Sbjct: 628 VKNIALDKTD--DSNPREAILRHAKAAEDNPYWVSPAYSKTQPKTMFAQVESDDEE 640

[Close]

BLAST of CmaCh02G017140 vs. TAIR 10
Match: AT2G20330.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 934.5 bits (2414), Expect = 4.7e-272
Identity = 471/666 (70.72%), Postives = 551/666 (82.73%), Query Frame = 0


Query: 1   MEDEAEIYDGIRAQFPLTFGKQSKAQTSLEAIHNTTRRNTSATVSEKSSSA------QNN 60
           MEDE E   G+RA FP++FGK SK   S EAIH+ TRR   A  +  SS         + 
Sbjct: 1   MEDELE---GLRAHFPVSFGKTSKVSASTEAIHSATRRTDVANDAGVSSDITTKKPDSDK 60

Query: 61  NGLPSISSSSKAWLDSLR-TSKNPNTHVSGDSEPSKITRDVDADEGPRIGPPRPRTELKL 120
           +G PS+SSSS+ WL S+R  ++NPN+  SGD                 +GPP P +  + 
Sbjct: 61  SGFPSLSSSSQTWLRSVRGPNRNPNS--SGD---------------VAMGPPPPPSSKRT 120

Query: 121 NDDSDDNDDDDAMVGPPPPPPRGEGSDDDEDDDGEMIGPPRPPPS---SNLDDSDAEEEE 180
            +  ++ +D++ M+G PPPPP+G G+ +D DD+G+MIGPP PPP+   S+ D  D ++ +
Sbjct: 121 QE--EEEEDEEVMMG-PPPPPKGLGNINDSDDEGDMIGPPPPPPAARDSDEDSDDDDDND 180

Query: 181 YEENRYRIPQSNEIVLKGHTKVVSALAVDHTGSRVLSGSYDYTVRMYDFQGMNSRLQSFR 240
            EENRY+IP SNEI LKGHTK+VS+LAVD  G+RVLSGSYDYTVRMYDFQGMNSRLQSFR
Sbjct: 181 NEENRYQIPLSNEIQLKGHTKIVSSLAVDSAGARVLSGSYDYTVRMYDFQGMNSRLQSFR 240

Query: 241 QLEPFEGHQIRNLSWSPSADRFLCVTGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGH 300
           Q+EP EGHQ+R++SWSP++ +FLCVTGSAQAKI+DRDGLTLGEFMKGDMYIRDLKNTKGH
Sbjct: 241 QIEPSEGHQVRSVSWSPTSGQFLCVTGSAQAKIFDRDGLTLGEFMKGDMYIRDLKNTKGH 300

Query: 301 ISGLTCGEWHPKNKETILTSSEDGSLRIWDVNDFKSQKQVIKPKLARPGRIPVTTCAWDR 360
           I GLTCGEWHP+ KET+LTSSEDGSLRIWDVN+F SQ QVIKPKLARPGR+PVTTCAWDR
Sbjct: 301 ICGLTCGEWHPRTKETVLTSSEDGSLRIWDVNNFLSQTQVIKPKLARPGRVPVTTCAWDR 360

Query: 361 EGKSIVGGMGDGSIQIWNLKPGWGSRPDIHVENSHSDDITALKFSSDGTILLSRSLDGSL 420
           +GK I GG+GDGSIQIW+LKPGWGSRPDI+V  +H+DDIT++KFSSDG ILLSRS DGSL
Sbjct: 361 DGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRSFDGSL 420

Query: 421 KVWDLRQIKKPLKEFDDLPNNYAQTNIAFSPDEQLFLTGTSVEKESQTGGLLCFYDRTKL 480
           KVWDLRQ+K+ LK F+ LPN Y QTN+AFSPDEQ+ LTGTSVEK+S TGGLLCFYDRTKL
Sbjct: 421 KVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQIILTGTSVEKDSTTGGLLCFYDRTKL 480

Query: 481 ELVSRVGIS-TTSVVQCAWHSKLNQIFATSGDKSQGGTHILYDPTLSERGALVCVARAPR 540
           E+V +VGIS T+SVVQCAWH +LNQIFATSGDKSQGGTHILYDP+ SERGA VCVARAPR
Sbjct: 481 EIVQKVGISPTSSVVQCAWHPRLNQIFATSGDKSQGGTHILYDPSQSERGACVCVARAPR 540

Query: 541 KKSVDDFEAKPVIHNPHALPLFRDAPSRKRQREKILKDPLKSHKPELPITGPGFGGRVGV 600
           KKSVDD++ +PVIHNPHALPLFRDAPSRKR+REK LKDP+KSHKPE+P+TGPG GGRVG 
Sbjct: 541 KKSVDDYQPEPVIHNPHALPLFRDAPSRKREREKALKDPMKSHKPEIPMTGPGHGGRVGT 600

Query: 601 TQGSLLTQYLMKQGGMIKETWMEEDPREAILKYADVAAKDPKFIAPAYSHTQPEPVFAKS 656
           T   LLTQYL+KQGGMIKETWMEEDPREAILKYA+VA KDPKFIAPAYS TQP+ +FAKS
Sbjct: 601 TGSGLLTQYLLKQGGMIKETWMEEDPREAILKYAEVAVKDPKFIAPAYSQTQPKTIFAKS 643

[Close]

BLAST of CmaCh02G017140 vs. TAIR 10
Match: AT5G25150.1 (TBP-associated factor 5 )

HSP 1 Score: 87.0 bits (214), Expect = 6.0e-17
Identity = 63/239 (26.36%), Postives = 110/239 (46.03%), Query Frame = 0


Query: 185 VLKGHTKVVSALAVDHTGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQIRNLS 244
           +L GH+  V +      G  VLS S D T+R++  + +N+ L  ++       + + +  
Sbjct: 413 LLLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTK-LNANLVCYKG----HNYPVWDAQ 472

Query: 245 WSPSADRFLCVTGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHISGLTCGEWHPKNK 304
           +SP    F   +    A+I+  D             I+ L+   GH+S + C +WHP N 
Sbjct: 473 FSPFGHYFASCSHDRTARIWSMD------------RIQPLRIMAGHLSDVDCVQWHP-NC 532

Query: 305 ETILTSSEDGSLRIWDVNDFKSQKQVIKPKLARPGRIPVTTCAWDREGKSIVGGMGDGSI 364
             I T S D ++R+WDV   +  +  I        R  V + A   +G+ +  G  DG+I
Sbjct: 533 NYIATGSSDKTVRLWDVQTGECVRIFI------GHRSMVLSLAMSPDGRYMASGDEDGTI 592

Query: 365 QIWNLKPGWGSRPDIHVENSHSDDITALKFSSDGTILLSRSLDGSLKVWDLRQIKKPLK 424
            +W+L       P +     H+  + +L +S +G++L S S D ++K+WD+    K  K
Sbjct: 593 MMWDLSTARCITPLM----GHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTK 623

[Close]

BLAST of CmaCh02G017140 vs. TAIR 10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 1.1e-15
Identity = 74/326 (22.70%), Postives = 140/326 (42.94%), Query Frame = 0


Query: 186 LKGHTKVVSALAVDHTGSRVLSGSYDYTVRMYDFQGMNSRLQSFRQLEPFEGHQ--IRNL 245
           L+GHT  +S +   + G+ + S S D T+ ++          ++  +  +EGH   I +L
Sbjct: 39  LEGHTAAISCVKFSNDGNLLASASVDKTMILWS-------ATNYSLIHRYEGHSSGISDL 98

Query: 246 SWSPSADRFLCVTGSAQAKIYDRDGLTLGEFMKGDMYIRDLKNTKGHISGLTCGEWHPKN 305
           +WS  +      +     +I+D                  LK  +GH + + C  ++P +
Sbjct: 99  AWSSDSHYTCSASDDCTLRIWD-----------ARSPYECLKVLRGHTNFVFCVNFNPPS 158

Query: 306 KETILTSSEDGSLRIWDVNDFKSQKQVIKPKLARPGRIPVTTCAWDREGKSIVGGMGDGS 365
              I++ S D ++RIW+V   K  + +      +   +P+++  ++R+G  IV    DGS
Sbjct: 159 -NLIVSGSFDETIRIWEVKTGKCVRMI------KAHSMPISSVHFNRDGSLIVSASHDGS 218

Query: 366 IQIWNLKPGWGSRPDIHVENSHSDDITALKFSSDGTILLSRSLDGSLKVWDLRQIKKPLK 425
            +IW+ K G   +  I   +  S  ++  KFS +G  +L  +LD +LK+ +     K LK
Sbjct: 219 CKIWDAKEGTCLKTLI---DDKSPAVSFAKFSPNGKFILVATLDSTLKLSNY-ATGKFLK 278

Query: 426 EFDDLPNNYAQTNIAFSPDEQLFLTGTSVEKESQTGGLLCFYDRTKLELVSRVGISTTSV 485
            +    N       AFS     ++   S +        +  +D     ++ R+   T +V
Sbjct: 279 VYTGHTNKVFCITSAFSVTNGKYIVSGSED------NCVYLWDLQARNILQRLEGHTDAV 322

Query: 486 VQCAWHSKLNQIFATSGDKSQGGTHI 510
           +  + H   N+I       S  G H+
Sbjct: 339 ISVSCHPVQNEI-------SSSGNHL 322

[Close]

BLAST of CmaCh02G017140 vs. TAIR 10
Match: AT2G43770.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 82.4 bits (202), Expect = 1.5e-15
Identity = 77/360 (21.39%), Postives = 153/360 (42.50%), Query Frame = 0


Query: 153 PRPPPSSNLDDSDAE-EEEYEENRYRIPQSNEIVLKGHTKVVSALAVDHTGSRVLSGSYD 212
           PRP   S +  S ++      +NR    ++  ++L GH   V  +  +  G+ + SGS+D
Sbjct: 15  PRPMEWSTVPHSASQGPGPNGKNRTSSLEAPIMLLSGHPSAVYTMKFNPAGTLIASGSHD 74

Query: 213 YTVRMYDFQGMNSRLQSFRQLEPFEGHQ--IRNLSWSPSADRFLCVTGSAQAKIYD-RDG 272
             + ++   G        +     +GH+  I +L W+    + +  +     + +D   G
Sbjct: 75  REIFLWRVHG------DCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETG 134

Query: 273 LTLGEFMKGDMYIRDLKNTKGHISGLTCGEWHPKNKETILTSSEDGSLRIWDVNDFKSQK 332
             + +  +   ++     T+             +    I++ S+DG+ ++WD+     Q+
Sbjct: 135 KQIKKMAEHSSFVNSCCPTR-------------RGPPLIISGSDDGTAKLWDMR----QR 194

Query: 333 QVIKPKLARPGRIPVTTCAWDREGKSIVGGMGDGSIQIWNLKPGWGSRPDIHVENSHSDD 392
             I+     P +  +T  ++      I  G  D  +++W+L+ G  +         H D 
Sbjct: 195 GAIQ---TFPDKYQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATM----TLEGHQDT 254

Query: 393 ITALKFSSDGTILLSRSLDGSLKVWDLRQI---KKPLKEFDDLPNNYAQT--NIAFSPDE 452
           IT +  S DG+ LL+  +D  L VWD+R      + +K F+   +N+ +     ++SPD 
Sbjct: 255 ITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPD- 314

Query: 453 QLFLTGTSVEKESQTGGLLCFYDRTKLELVSRVGISTTSVVQCAWHSKLNQIFATSGDKS 504
                GT V   S +  ++  +D T    + ++   T SV +C +H     I + S DK+
Sbjct: 315 -----GTKVTAGS-SDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKN 337

[Close]

BLAST of CmaCh02G017140 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 66.2 bits (160), Expect = 1.1e-10
Identity = 42/147 (28.57%), Postives = 77/147 (52.38%), Query Frame = 0


Query: 307 ILTSSEDGSLRIWDVNDFKSQKQVIKPKLARPGRIPVTTCA-WDREGKSIVGGMGDGSIQ 366
           I+++S+D +L++WDV      K +I       G      C  ++ +   IV G  D +++
Sbjct: 86  IVSASDDKTLKLWDVETGSLIKTLI-------GHTNYAFCVNFNPQSNMIVSGSFDETVR 145

Query: 367 IWNLKPGWGSRPDIHVENSHSDDITALKFSSDGTILLSRSLDGSLKVWD--LRQIKKPLK 426
           IW++  G      + V  +HSD +TA+ F+ DG++++S S DG  ++WD       K L 
Sbjct: 146 IWDVTTG----KCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLI 205

Query: 427 EFDDLPNNYAQTNIAFSPDEQLFLTGT 451
           + ++ P ++    + FSP+ +  L GT
Sbjct: 206 DDENPPVSF----VRFSPNGKFILVGT 217

The following BLAST results are available for this feature:

BLAST of CmaCh02G017140 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6GPP0	2.9e-117	41.92	WD repeat-containing protein 70 OS=Xenopus laevis OX=8355 GN=wdr70 PE=2 SV=2	[more]
Q9NW82	3.2e-116	38.91	WD repeat-containing protein 70 OS=Homo sapiens OX=9606 GN=WDR70 PE=1 SV=1	[more]
Q5EB92	4.2e-116	39.07	WD repeat-containing protein 70 OS=Rattus norvegicus OX=10116 GN=Wdr70 PE=1 SV=1	[more]
Q0VA16	9.3e-116	39.69	WD repeat-containing protein 70 OS=Xenopus tropicalis OX=8364 GN=wdr70 PE=2 SV=1	[more]
Q32LB0	3.0e-114	39.33	WD repeat-containing protein 70 OS=Bos taurus OX=9913 GN=WDR70 PE=2 SV=1	[more]

BLAST of CmaCh02G017140 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G20330.1	4.7e-272	70.72	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G25150.1	6.0e-17	26.36	TBP-associated factor 5	[more]
AT4G02730.1	1.1e-15	22.70	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G43770.1	1.5e-15	21.39	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49660.1	1.1e-10	28.57	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 307..321 score: 36.37 coord: 355..369 score: 27.54 coord: 401..415 score: 39.26
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 469..512 e-value: 280.0 score: 1.5 coord: 179..218 e-value: 2.0E-6 score: 37.3 coord: 277..320 e-value: 1.8E-4 score: 30.8 coord: 228..265 e-value: 4.7 score: 12.8 coord: 375..414 e-value: 1.1E-5 score: 34.9 coord: 324..368 e-value: 3.7 score: 13.4
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 384..414 e-value: 2.0E-4 score: 22.1 coord: 184..218 e-value: 3.4E-4 score: 21.4 coord: 285..320 e-value: 0.0026 score: 18.6 coord: 343..368 e-value: 0.05 score: 14.5
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 186..227 score: 11.577833
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 382..416 score: 14.852817
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 287..329 score: 12.246197
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 343..370 score: 8.837541
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 275..514 e-value: 1.6E-37 score: 131.4 coord: 21..274 e-value: 3.0E-13 score: 51.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..177
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 634..656
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..115
None	No IPR available	PANTHER	PTHR16017	GASTRULATION DEFECTIVE PROTEIN 1-RELATED	coord: 3..656
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 186..220 score: 9.651964
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 287..322 score: 9.862871
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 382..416 score: 12.26195
None	No IPR available	CDD	cd00200	WD40	coord: 185..503 e-value: 3.05722E-43 score: 155.571
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 355..369
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 307..321
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 169..502

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G017140.1	CmaCh02G017140.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1903775	regulation of DNA double-strand break processing
biological_process	GO:2001173	regulation of histone H2B conserved C-terminal lysine ubiquitination
cellular_component	GO:0005634	nucleus
cellular_component	GO:0035861	site of double-strand break
molecular_function	GO:0005515	protein binding