CmaCh02G017010 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G017010
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	26S proteasome regulatory subunit 4 homolog
Location	Cma_Chr02: 9581918 .. 9585091 (+)
RNA-Seq Expression	CmaCh02G017010
Synteny	CmaCh02G017010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTGAATATTAGCTTCAAGCGGCTGCCATTTATCGGAATCCCTCTCATCTATTTCGGATTGCAAGAAATGGGTCAAGGAACTCCAGGTGGTCTCAACCGGCAAGCTCCCGGCGACCGGAAATCCGACGGCGATAAAAAGAAAGACAAGAAATATGAACCGGCGGCACCCCCGACTCGAGTTGGCCGGAAACAGCGGAAGCAGAAAGGACCGGAGGCGGCGGCTCGGCTGCCGACAGTGACGCCTCACACGAAGTGCAGGCTGAGGCTTCTGAAGCTTGAGCGTGTGAAGGATTACCTGTTAATGGAAGAGGAATTTGTCACTAATCAGGAACGTCTTAAGCCGCAGGAGGAGAAGGCGGAGGAGGATCGCTCTAAAGTCGATGATCTGAGAGGATCTCCAATGAGTGTTGGAAATTTGGAGGAGTTAATTGATGAAAATCATGCGATTGTTTCCTCCTCTGTTGGACCGGAGTATTACGTTGGTATTATGTCTTTTGTTGATAAAGATCAACTTGAGCCTGGGTGTGCAATTTTGATGCATAATAAGGTATAGGGCTTTCAGATTTTTTTGAATATTTTTTGGAATTCTCTCTTGTTAATTGTTTTTTGGCATTTGATTTTTTGTTGGAGTTCATTCCATTTCCTTTTGATGTATTAGATTGTTAGTATTAACTTGTGTAGTTTGATGTTGCAATTTCGAGACTTACTTCTAGTTTGGATGGGGACATAATGTGGTAGGCATAAGTGCATTTGACTTGTGGGAATGGCTTCAAATATTGATGATATTCCAAGTCTAGTAATCCCAATTCAGTTTATGTCGTGCTTCATTACATGTTACTGTGATTTAGGTATTACCACTTAGCCAACTGTTGTGGAATCTAAAATGCTGGCAGTTAAAAAGTTTTAGTTCAAAATTTGTCCACAGAACTTATGTTCAGGTCTTAATCATTTCCACTTTTCTTTTATCAACTGTGAAGTCTTTGAAGTGTTGTTGTCGAATAGTAGTGATGGAAACCACTTTGCGAGTCGGCGCTTTGTACGAAATTAGGCACATGTCCTTTAGTTTCTTAGTTGGAATATGATCAAGACATTTGCTGATCATTTTGCCTACTGTCGTCGGTTCCTTTCAGGTACTTTCTGTTGTTGGACTTCTCCAAGATGAGGTTGATCCAATGGTGTCTGTGATGAAAGTTGAGAAGGCCCCTTTAGAGTCATACGCTGATATTGGAGGATTGGATGCTCAAATACAAGAGATTAAAGAAGCTGTTGAGTTGCCATTGACTCATCCTGAGTTATATGAGGACATAGGTATTAGGCCTCCTAAAGGTGTGATACTTTATGGGGAGCCAGGAACAGGCAAGACTTTGCTTGCAAAGGTGAGTGTTTATTCTTCTCCCTTCAAAACTTTGATGCCCACAAGTTCAATAGATTTATTACTTATTGTGTTATACGGTATCATTTGTGTAAACTTTTAATCATTCAGACTTTCTAGGATGCTATGTAGAAATATAATGGTGTAAGTTAAAAATTTTCTCTGAGTTTGTAAACCATATTTCCCTTCTTTTAGGCAGTTGCGAACTCAACTTCAGCCACTTTCCTGCGCGTGGTTGGGAGTGAACTCATCCAGAAGTACTTGGGAGATGGTCCAAAGTTAGTAAGAGAGCTCTTCAGGGTTGCTGATGATCTTTCACCTTCCATTGTTTTTATTGATGAGATCGATGCTGTCGGCACAAAAAGGTCAGTTGTTTGACATTCATATTTCAAAAGAAGGATGGTGGTTTCTTATTCATGCTCCCTGCAGGTATGATGCTCACTCTGGAGGTGAACGCGAGATCCAAAGGACAATGTTGGAATTGCTGAACCAATTGGATGGTTTTGATTCAAGAGGAGATGTTAAAGTGATACTAGCTACAAACAGAATCGAAAGTCTCGATCCAGCTTTGCTTCGACCAGGCCGAATCGATAGGAAGATTGAGTTTCCCTTGCCTGACATAAAAACCAGGAGACGAATTTTTCAGGTCTAGTTGTCAATCGAAAGCATTTTAATTTGGAAGCTGCGTATTAACTACACCATTCTTTAGTTCGGGTTGCTTAGATCTTTAAAAATGTTTCTTGTTTATTTAACTCCTCGAAACGTCTGATTTGCAGATACACACATCAAGGATGACATTAGCAGACGATGTCAACCTGGAGGAATTTGTTATGACCAAAGATGAATTCTCTGGTGCTGATATAAAGGCCATATGTACTGAAGCTGGGTTGCTGGCTTTGAGAGAACGGCGCATGAAGGTAAGAGATGCCTCAGTTTCCAATTGAACTATGTTGCAAGAAAATCTCCTGTTTTTAGCTTTTCATTATTTAGAACTATGCTTGTTTCCCCCCGTTTCTTTTAATATGGTTTTCACCCGTTAAAGATACATTAGAATTCTTAACCAAGTTCTGAAAATTAAAAAATATTTTCAGAAAGTAGAGGACAAAACAAACAAATTCAAATTCGTGGTGAAAGTAGTATTTATAAGTTTAATTTTTTAAAATTGAATGGTTATCTAGTTGGTCTGTTGTTTACTGGACCTACGATGTCAATATGACCGCAATTGGACGGTTTATCTCGAGTCGTTGTGTACATTGTTTGTCTTGAGTCGATTGAATGACGGTGAACAGTAGCTTAAGCTGTTCTTTTGATGTTTATTTCACTCCAGGTCACACATGCCGACTTCAAAAAGGCAAAGGAGAAGGTTATGTACAAGAAGAAAGAAGGCGTACCAGAAGGCTTATATATGTAACGAAGATTATGGATAGTGTGTTTGAAATTGTTCGAAGTAATGTCTGAATATCAAGACAAGACTTTCAACTCTCAAAATTCCATACATACAATCCATTCGCTTTCCTTTCAATTTGTTTATTTCTTTTGTTTATTTCTTTGCAAGCAGTTAAATATAGATTTATAAATAACGAGGAGAAGGAAAGAGGAAAAAAAAACATTGCCATCCTTTTGTCAAAAACATGTCTTTCTACAAACTAATAAGTCCAGAAAGACAATTATATATTGTTGTACCACTGGTTTGGTTGTTCTACAAACTAATAACTAACAAACAGCTTTGGTTGATCCTCTCAAAGTGGCATTTTCCCGTGTAGAGTTGTATCACTGGTAGATCATTAGACGGAGTCTGCCG

mRNA sequence

GACTGAATATTAGCTTCAAGCGGCTGCCATTTATCGGAATCCCTCTCATCTATTTCGGATTGCAAGAAATGGGTCAAGGAACTCCAGGTGGTCTCAACCGGCAAGCTCCCGGCGACCGGAAATCCGACGGCGATAAAAAGAAAGACAAGAAATATGAACCGGCGGCACCCCCGACTCGAGTTGGCCGGAAACAGCGGAAGCAGAAAGGACCGGAGGCGGCGGCTCGGCTGCCGACAGTGACGCCTCACACGAAGTGCAGGCTGAGGCTTCTGAAGCTTGAGCGTGTGAAGGATTACCTGTTAATGGAAGAGGAATTTGTCACTAATCAGGAACGTCTTAAGCCGCAGGAGGAGAAGGCGGAGGAGGATCGCTCTAAAGTCGATGATCTGAGAGGATCTCCAATGAGTGTTGGAAATTTGGAGGAGTTAATTGATGAAAATCATGCGATTGTTTCCTCCTCTGTTGGACCGGAGTATTACGTTGGTATTATGTCTTTTGTTGATAAAGATCAACTTGAGCCTGGGTGTGCAATTTTGATGCATAATAAGGTACTTTCTGTTGTTGGACTTCTCCAAGATGAGGTTGATCCAATGGTGTCTGTGATGAAAGTTGAGAAGGCCCCTTTAGAGTCATACGCTGATATTGGAGGATTGGATGCTCAAATACAAGAGATTAAAGAAGCTGTTGAGTTGCCATTGACTCATCCTGAGTTATATGAGGACATAGGTATTAGGCCTCCTAAAGGTGTGATACTTTATGGGGAGCCAGGAACAGGCAAGACTTTGCTTGCAAAGGCAGTTGCGAACTCAACTTCAGCCACTTTCCTGCGCGTGGTTGGGAGTGAACTCATCCAGAAGTACTTGGGAGATGGTCCAAAGTTAGTAAGAGAGCTCTTCAGGGTTGCTGATGATCTTTCACCTTCCATTGTTTTTATTGATGAGATCGATGCTGTCGGCACAAAAAGGTATGATGCTCACTCTGGAGGTGAACGCGAGATCCAAAGGACAATGTTGGAATTGCTGAACCAATTGGATGGTTTTGATTCAAGAGGAGATGTTAAAGTGATACTAGCTACAAACAGAATCGAAAGTCTCGATCCAGCTTTGCTTCGACCAGGCCGAATCGATAGGAAGATTGAGTTTCCCTTGCCTGACATAAAAACCAGGAGACGAATTTTTCAGATACACACATCAAGGATGACATTAGCAGACGATGTCAACCTGGAGGAATTTGTTATGACCAAAGATGAATTCTCTGGTGCTGATATAAAGGCCATATGTACTGAAGCTGGGTCACACATGCCGACTTCAAAAAGGCAAAGGAGAAGGTTATGTACAAGAAGAAAGAAGGCGTACCAGAAGGCTTATATATGTAACGAAGATTATGGATAGTGTGTTTGAAATTGTTCGAAGTAATGTCTGAATATCAAGACAAGACTTTCAACTCTCAAAATTCCATACATACAATCCATTCGCTTTCCTTTCAATTTGTTTATTTCTTTTGTTTATTTCTTTGCAAGCAGTTAAATATAGATTTATAAATAACGAGGAGAAGGAAAGAGGAAAAAAAAACATTGCCATCCTTTTGTCAAAAACATGTCTTTCTACAAACTAATAAGTCCAGAAAGACAATTATATATTGTTGTACCACTGGTTTGGTTGTTCTACAAACTAATAACTAACAAACAGCTTTGGTTGATCCTCTCAAAGTGGCATTTTCCCGTGTAGAGTTGTATCACTGGTAGATCATTAGACGGAGTCTGCCG

Coding sequence (CDS)

ATGGGTCAAGGAACTCCAGGTGGTCTCAACCGGCAAGCTCCCGGCGACCGGAAATCCGACGGCGATAAAAAGAAAGACAAGAAATATGAACCGGCGGCACCCCCGACTCGAGTTGGCCGGAAACAGCGGAAGCAGAAAGGACCGGAGGCGGCGGCTCGGCTGCCGACAGTGACGCCTCACACGAAGTGCAGGCTGAGGCTTCTGAAGCTTGAGCGTGTGAAGGATTACCTGTTAATGGAAGAGGAATTTGTCACTAATCAGGAACGTCTTAAGCCGCAGGAGGAGAAGGCGGAGGAGGATCGCTCTAAAGTCGATGATCTGAGAGGATCTCCAATGAGTGTTGGAAATTTGGAGGAGTTAATTGATGAAAATCATGCGATTGTTTCCTCCTCTGTTGGACCGGAGTATTACGTTGGTATTATGTCTTTTGTTGATAAAGATCAACTTGAGCCTGGGTGTGCAATTTTGATGCATAATAAGGTACTTTCTGTTGTTGGACTTCTCCAAGATGAGGTTGATCCAATGGTGTCTGTGATGAAAGTTGAGAAGGCCCCTTTAGAGTCATACGCTGATATTGGAGGATTGGATGCTCAAATACAAGAGATTAAAGAAGCTGTTGAGTTGCCATTGACTCATCCTGAGTTATATGAGGACATAGGTATTAGGCCTCCTAAAGGTGTGATACTTTATGGGGAGCCAGGAACAGGCAAGACTTTGCTTGCAAAGGCAGTTGCGAACTCAACTTCAGCCACTTTCCTGCGCGTGGTTGGGAGTGAACTCATCCAGAAGTACTTGGGAGATGGTCCAAAGTTAGTAAGAGAGCTCTTCAGGGTTGCTGATGATCTTTCACCTTCCATTGTTTTTATTGATGAGATCGATGCTGTCGGCACAAAAAGGTATGATGCTCACTCTGGAGGTGAACGCGAGATCCAAAGGACAATGTTGGAATTGCTGAACCAATTGGATGGTTTTGATTCAAGAGGAGATGTTAAAGTGATACTAGCTACAAACAGAATCGAAAGTCTCGATCCAGCTTTGCTTCGACCAGGCCGAATCGATAGGAAGATTGAGTTTCCCTTGCCTGACATAAAAACCAGGAGACGAATTTTTCAGATACACACATCAAGGATGACATTAGCAGACGATGTCAACCTGGAGGAATTTGTTATGACCAAAGATGAATTCTCTGGTGCTGATATAAAGGCCATATGTACTGAAGCTGGGTCACACATGCCGACTTCAAAAAGGCAAAGGAGAAGGTTATGTACAAGAAGAAAGAAGGCGTACCAGAAGGCTTATATATGTAACGAAGATTATGGATAG

Protein sequence

MGQGTPGGLNRQAPGDRKSDGDKKKDKKYEPAAPPTRVGRKQRKQKGPEAAARLPTVTPHTKCRLRLLKLERVKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGPEYYVGIMSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGSHMPTSKRQRRRLCTRRKKAYQKAYICNEDYG

Homology

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BLAST of CmaCh02G017010 vs. ExPASy Swiss-Prot
Match: Q9SZD4 (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana OX=3702 GN=RPT2A PE=1 SV=1)

HSP 1 Score: 747.7 bits (1929), Expect = 7.7e-215
Identity = 393/433 (90.76%), Postives = 409/433 (94.46%), Query Frame = 0


Query: 1   MGQGTPGGLNRQAPGDRKSDGDKKKDKKYEPAAPPTRVGRKQRKQKGPEAAARLPTVTPH 60
           MGQG  GGLNRQ  GDRK DG  KK+KK+EPAAPP RVGRKQRKQKGPEAAARLPTVTP 
Sbjct: 1   MGQGPSGGLNRQ--GDRKPDGGDKKEKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPS 60

Query: 61  TKCRLRLLKLERVKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEEL 120
           TKC+LRLLKLER+KDYLLMEEEFV NQERLKPQEEKAEEDRSKVDDLRG+PMSVGNLEEL
Sbjct: 61  TKCKLRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEEL 120

Query: 121 IDENHAIVSSSVGPEYYVGIMSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMK 180
           IDENHAIVSSSVGPEYYVGI+SFVDKDQLEPGC+ILMHNKVLSVVG+LQDEVDPMVSVMK
Sbjct: 121 IDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMK 180

Query: 181 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLL 240
           VEKAPLESYADIGGL+AQIQEIKEAVELPLTHPELYEDIGI+PPKGVILYGEPGTGKTLL
Sbjct: 181 VEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLL 240

Query: 241 AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRY 300
           AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRY
Sbjct: 241 AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRY 300

Query: 301 DAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL 360
           DAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL
Sbjct: 301 DAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL 360

Query: 361 PDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGSHMPTSKRQRRR 420
           PDIKTRRRIFQIHTS+MTL++DVNLEEFVMTKDEFSGADIKAICTEAG     + R+RR 
Sbjct: 361 PDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGL---LALRERRM 420

Query: 421 LCTRR--KKAYQK 432
             T    KKA +K
Sbjct: 421 KVTHPDFKKAKEK 428

[Close]

BLAST of CmaCh02G017010 vs. ExPASy Swiss-Prot
Match: Q9SL67 (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana OX=3702 GN=RPT2B PE=1 SV=1)

HSP 1 Score: 746.5 bits (1926), Expect = 1.7e-214
Identity = 393/433 (90.76%), Postives = 410/433 (94.69%), Query Frame = 0


Query: 1   MGQGTPGGLNRQAPGDRKSDGDKKKDKKYEPAAPPTRVGRKQRKQKGPEAAARLPTVTPH 60
           MGQG  GGLNRQ  GDRK DG +KK+KK+EPAAPP RVGRKQRKQKGPEAAARLPTVTP 
Sbjct: 1   MGQGPSGGLNRQ--GDRKPDGGEKKEKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPS 60

Query: 61  TKCRLRLLKLERVKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEEL 120
           TKC+LRLLKLER+KDYLLMEEEFV NQERLKPQEEKAEEDRSKVDDLRG+PMSVGNLEEL
Sbjct: 61  TKCKLRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEEL 120

Query: 121 IDENHAIVSSSVGPEYYVGIMSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMK 180
           IDENHAIVSSSVGPEYYVGI+SFVDKDQLEPGC+ILMHNKVLSVVG+LQDEVDPMVSVMK
Sbjct: 121 IDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMK 180

Query: 181 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLL 240
           VEKAPLESYADIGGL+AQIQEIKEAVELPLTHPELYEDIGI+PPKGVILYGEPGTGKTLL
Sbjct: 181 VEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLL 240

Query: 241 AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRY 300
           AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRY
Sbjct: 241 AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRY 300

Query: 301 DAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL 360
           DA+SGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL
Sbjct: 301 DANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL 360

Query: 361 PDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGSHMPTSKRQRRR 420
           PDIKTRRRIFQIHTS+MTLA+DVNLEEFVMTKDEFSGADIKAICTEAG     + R+RR 
Sbjct: 361 PDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGL---LALRERRM 420

Query: 421 LCTR--RKKAYQK 432
             T    KKA +K
Sbjct: 421 KVTHVDFKKAKEK 428

[Close]

BLAST of CmaCh02G017010 vs. ExPASy Swiss-Prot
Match: P46466 (26S proteasome regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=TBP2 PE=2 SV=2)

HSP 1 Score: 729.9 bits (1883), Expect = 1.7e-209
Identity = 386/436 (88.53%), Postives = 406/436 (93.12%), Query Frame = 0


Query: 1   MGQGTPGGLNRQ--APGDRKSDGD-KKKDKKYEPAAPPTRVGRKQRKQKGPEAAARLPTV 60
           MGQGTPGG+ +Q  APGDRK  GD  KKD+K+EP A P+RVGRKQRKQKGPEAAARLP V
Sbjct: 1   MGQGTPGGMGKQGGAPGDRKPGGDGDKKDRKFEPPAAPSRVGRKQRKQKGPEAAARLPNV 60

Query: 61  TPHTKCRLRLLKLERVKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNL 120
            P +KCRLRLLKLERVKDYLLMEEEFV  QERL+P E+K EEDRSKVDDLRG+PMSVG+L
Sbjct: 61  APLSKCRLRLLKLERVKDYLLMEEEFVAAQERLRPTEDKTEEDRSKVDDLRGTPMSVGSL 120

Query: 121 EELIDENHAIVSSSVGPEYYVGIMSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVS 180
           EE+IDE+HAIVSSSVGPEYYVGI+SFVDKDQLEPGC+ILMHNKVLSVVG+LQDEVDPMVS
Sbjct: 121 EEIIDESHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVS 180

Query: 181 VMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGK 240
           VMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGK
Sbjct: 181 VMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGK 240

Query: 241 TLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGT 300
           TLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVAD+LSPSIVFIDEIDAVGT
Sbjct: 241 TLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADELSPSIVFIDEIDAVGT 300

Query: 301 KRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIE 360
           KRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIE
Sbjct: 301 KRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIE 360

Query: 361 FPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGSHMPTSKRQ 420
           FPLPDIKTRRRIFQIHTS+MTLADDVNLEEFVMTKDEFSGADIKAICTEAG     + R+
Sbjct: 361 FPLPDIKTRRRIFQIHTSKMTLADDVNLEEFVMTKDEFSGADIKAICTEAGL---LALRE 420

Query: 421 RRRLCTRR--KKAYQK 432
           RR   T    KKA +K
Sbjct: 421 RRMKVTHADFKKAKEK 433

[Close]

BLAST of CmaCh02G017010 vs. ExPASy Swiss-Prot
Match: P48601 (26S proteasome regulatory subunit 4 OS=Drosophila melanogaster OX=7227 GN=Rpt2 PE=1 SV=2)

HSP 1 Score: 634.8 bits (1636), Expect = 7.3e-181
Identity = 317/394 (80.46%), Postives = 365/394 (92.64%), Query Frame = 0


Query: 15  GDRKSDGDKKKDKKYEPAAPPTRVGRKQRKQKGPEAAARLPTVTPHTKCRLRLLKLERVK 74
           G++K D DKK  KKYEP   PTRVG+K+R+ KGP+AA +LP VTPHT+CRL+LLKLER+K
Sbjct: 12  GEKKDDKDKK--KKYEPPI-PTRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIK 71

Query: 75  DYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENHAIVSSSVGP 134
           DYL+ME+EF+ NQERLKPQ+EK EE+RSKVDDLRG+PMSVGNLEE+ID+NHAIVS+SVG 
Sbjct: 72  DYLMMEDEFIRNQERLKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGS 131

Query: 135 EYYVGIMSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKAPLESYADIGG 194
           E+YV I+SFVDKDQLEPGC++L+++KV +VVG+L D+ DPMV+VMK+EKAP E+YADIGG
Sbjct: 132 EHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGG 191

Query: 195 LDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAVANSTSATFLR 254
           LD QIQEIKE+VELPLTHPE YE++GI+PPKGVILYG PGTGKTLLAKAVAN TSATFLR
Sbjct: 192 LDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLR 251

Query: 255 VVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHSGGEREIQRTM 314
           VVGSELIQKYLGDGPKLVRELFRVA++ +PSIVFIDEIDAVGTKRYD++SGGEREIQRTM
Sbjct: 252 VVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTM 311

Query: 315 LELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIKTRRRIFQIHT 374
           LELLNQLDGFDSRGDVKVI+ATNRIE+LDPAL+RPGRIDRKIEFPLPD KT+RRIF IHT
Sbjct: 312 LELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKTKRRIFTIHT 371

Query: 375 SRMTLADDVNLEEFVMTKDEFSGADIKAICTEAG 409
           SRMTLA+DVNL E +M KD+ SGADIKAICTEAG
Sbjct: 372 SRMTLAEDVNLSELIMAKDDLSGADIKAICTEAG 402

[Close]

BLAST of CmaCh02G017010 vs. ExPASy Swiss-Prot
Match: P62191 (26S proteasome regulatory subunit 4 OS=Homo sapiens OX=9606 GN=PSMC1 PE=1 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 1.8e-179
Identity = 318/408 (77.94%), Postives = 368/408 (90.20%), Query Frame = 0


Query: 1   MGQGTPGGLNRQAPGDRKSDGDKKKDKKYEPAAPPTRVGRKQRKQKGPEAAARLPTVTPH 60
           MGQ   GG     PG  K D DK K KKYEP   PTRVG+K++K KGP+AA++LP VTPH
Sbjct: 1   MGQSQSGG---HGPGGGKKD-DKDKKKKYEPPV-PTRVGKKKKKTKGPDAASKLPLVTPH 60

Query: 61  TKCRLRLLKLERVKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEEL 120
           T+CRL+LLKLER+KDYLLMEEEF+ NQE++KP EEK EE+RSKVDDLRG+PMSVG LEE+
Sbjct: 61  TQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEI 120

Query: 121 IDENHAIVSSSVGPEYYVGIMSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMK 180
           ID+NHAIVS+SVG E+YV I+SFVDKD LEPGC++L+++KV +V+G+L D+ DP+V+VMK
Sbjct: 121 IDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMK 180

Query: 181 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLL 240
           VEKAP E+YADIGGLD QIQEIKE+VELPLTHPE YE++GI+PPKGVILYG PGTGKTLL
Sbjct: 181 VEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLL 240

Query: 241 AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRY 300
           AKAVAN TSATFLRVVGSELIQKYLGDGPKLVRELFRVA++ +PSIVFIDEIDA+GTKRY
Sbjct: 241 AKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRY 300

Query: 301 DAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL 360
           D++SGGEREIQRTMLELLNQLDGFDSRGDVKVI+ATNRIE+LDPAL+RPGRIDRKIEFPL
Sbjct: 301 DSNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPL 360

Query: 361 PDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAG 409
           PD KT++RIFQIHTSRMTLADDV L++ +M KD+ SGADIKAICTEAG
Sbjct: 361 PDEKTKKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAG 403

[Close]

BLAST of CmaCh02G017010 vs. TAIR 10
Match: AT4G29040.1 (regulatory particle AAA-ATPase 2A )

HSP 1 Score: 747.7 bits (1929), Expect = 5.5e-216
Identity = 393/433 (90.76%), Postives = 409/433 (94.46%), Query Frame = 0


Query: 1   MGQGTPGGLNRQAPGDRKSDGDKKKDKKYEPAAPPTRVGRKQRKQKGPEAAARLPTVTPH 60
           MGQG  GGLNRQ  GDRK DG  KK+KK+EPAAPP RVGRKQRKQKGPEAAARLPTVTP 
Sbjct: 1   MGQGPSGGLNRQ--GDRKPDGGDKKEKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPS 60

Query: 61  TKCRLRLLKLERVKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEEL 120
           TKC+LRLLKLER+KDYLLMEEEFV NQERLKPQEEKAEEDRSKVDDLRG+PMSVGNLEEL
Sbjct: 61  TKCKLRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEEL 120

Query: 121 IDENHAIVSSSVGPEYYVGIMSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMK 180
           IDENHAIVSSSVGPEYYVGI+SFVDKDQLEPGC+ILMHNKVLSVVG+LQDEVDPMVSVMK
Sbjct: 121 IDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMK 180

Query: 181 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLL 240
           VEKAPLESYADIGGL+AQIQEIKEAVELPLTHPELYEDIGI+PPKGVILYGEPGTGKTLL
Sbjct: 181 VEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLL 240

Query: 241 AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRY 300
           AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRY
Sbjct: 241 AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRY 300

Query: 301 DAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL 360
           DAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL
Sbjct: 301 DAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL 360

Query: 361 PDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGSHMPTSKRQRRR 420
           PDIKTRRRIFQIHTS+MTL++DVNLEEFVMTKDEFSGADIKAICTEAG     + R+RR 
Sbjct: 361 PDIKTRRRIFQIHTSKMTLSEDVNLEEFVMTKDEFSGADIKAICTEAGL---LALRERRM 420

Query: 421 LCTRR--KKAYQK 432
             T    KKA +K
Sbjct: 421 KVTHPDFKKAKEK 428

[Close]

BLAST of CmaCh02G017010 vs. TAIR 10
Match: AT2G20140.1 (AAA-type ATPase family protein )

HSP 1 Score: 746.5 bits (1926), Expect = 1.2e-215
Identity = 393/433 (90.76%), Postives = 410/433 (94.69%), Query Frame = 0


Query: 1   MGQGTPGGLNRQAPGDRKSDGDKKKDKKYEPAAPPTRVGRKQRKQKGPEAAARLPTVTPH 60
           MGQG  GGLNRQ  GDRK DG +KK+KK+EPAAPP RVGRKQRKQKGPEAAARLPTVTP 
Sbjct: 1   MGQGPSGGLNRQ--GDRKPDGGEKKEKKFEPAAPPARVGRKQRKQKGPEAAARLPTVTPS 60

Query: 61  TKCRLRLLKLERVKDYLLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEEL 120
           TKC+LRLLKLER+KDYLLMEEEFV NQERLKPQEEKAEEDRSKVDDLRG+PMSVGNLEEL
Sbjct: 61  TKCKLRLLKLERIKDYLLMEEEFVANQERLKPQEEKAEEDRSKVDDLRGTPMSVGNLEEL 120

Query: 121 IDENHAIVSSSVGPEYYVGIMSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMK 180
           IDENHAIVSSSVGPEYYVGI+SFVDKDQLEPGC+ILMHNKVLSVVG+LQDEVDPMVSVMK
Sbjct: 121 IDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMK 180

Query: 181 VEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLL 240
           VEKAPLESYADIGGL+AQIQEIKEAVELPLTHPELYEDIGI+PPKGVILYGEPGTGKTLL
Sbjct: 181 VEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLL 240

Query: 241 AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRY 300
           AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRY
Sbjct: 241 AKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRY 300

Query: 301 DAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL 360
           DA+SGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL
Sbjct: 301 DANSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL 360

Query: 361 PDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGSHMPTSKRQRRR 420
           PDIKTRRRIFQIHTS+MTLA+DVNLEEFVMTKDEFSGADIKAICTEAG     + R+RR 
Sbjct: 361 PDIKTRRRIFQIHTSKMTLAEDVNLEEFVMTKDEFSGADIKAICTEAGL---LALRERRM 420

Query: 421 LCTR--RKKAYQK 432
             T    KKA +K
Sbjct: 421 KVTHVDFKKAKEK 428

[Close]

BLAST of CmaCh02G017010 vs. TAIR 10
Match: AT5G58290.1 (regulatory particle triple-A ATPase 3 )

HSP 1 Score: 371.3 bits (952), Expect = 1.1e-102
Identity = 186/372 (50.00%), Postives = 272/372 (73.12%), Query Frame = 0


Query: 66  RLLKLERVKDYLLMEEEFVTN-QERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDEN 125
           RL  LER  ++  ++EE+V + Q+ LK +  +A+E+  ++  +   P+ +G   E++D+N
Sbjct: 33  RLKSLERQLEFTDIQEEYVKDEQKNLKRELLRAQEEVKRIQSV---PLVIGQFMEMVDQN 92

Query: 126 HAIVSSSVGPEYYVGIMSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPMVSVMKVEKA 185
           + IV S+ G  YYV I+S ++++ L+P  ++ +H    ++V +L  E D  +S++   + 
Sbjct: 93  NGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEK 152

Query: 186 PLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGTGKTLLAKAV 245
           P  SY DIGG D Q QEI+EAVELPLTH ELY+ IGI PP+GV+LYG PGTGKT+LAKAV
Sbjct: 153 PDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAV 212

Query: 246 ANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKRYDAHS 305
           AN T+A F+RVVGSE +QKYLG+GP++VR++FR+A + +P+I+FIDE+DA+ T R+DA +
Sbjct: 213 ANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQT 272

Query: 306 GGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPLPDIK 365
           G +RE+QR ++ELLNQ+DGFD   +VKVI+ATNR ++LDPALLRPGR+DRKIEFPLPD +
Sbjct: 273 GADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRR 332

Query: 366 TRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAGSHMPTSKRQRRRLCTR 425
            +R +FQ+ TS+M L+D+V+LE++V   D+ S A+I AIC EAG H   + R+ R +   
Sbjct: 333 QKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMH---AVRKNRYVIL- 392

Query: 426 RKKAYQKAYICN 437
             K ++K Y  N
Sbjct: 393 -PKDFEKGYRAN 396

[Close]

BLAST of CmaCh02G017010 vs. TAIR 10
Match: AT1G09100.1 (26S proteasome AAA-ATPase subunit RPT5B )

HSP 1 Score: 317.8 bits (813), Expect = 1.4e-86
Identity = 166/353 (47.03%), Postives = 234/353 (66.29%), Query Frame = 0


Query: 77  LLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELID---ENHA------- 136
           +L EE   TN + L+  +EK +E++ K+   +  P  VGN+ E+++   E+ A       
Sbjct: 37  ILKEESQRTNLD-LESVKEKIKENQEKIKLNKQLPYLVGNIVEILEMSPEDDAEEDGANI 96

Query: 137 -----------IVSSSVGPEYYVGIMSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPM 196
                      ++ +S     ++ ++  VD D L+PG  + ++     ++  L  E D  
Sbjct: 97  DLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDTLKPGDLVGVNKDSYLILDTLPSEYDSR 156

Query: 197 VSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGT 256
           V  M+V++ P E Y DIGGL+ QIQE+ EA+ LP+TH E +E +GIRPPKGV+LYG PGT
Sbjct: 157 VKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEKLGIRPPKGVLLYGPPGT 216

Query: 257 GKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAV 316
           GKTL+A+A A  T+ATFL++ G +L+Q ++GDG KLVR+ F +A + SP I+FIDEIDA+
Sbjct: 217 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSPCIIFIDEIDAI 276

Query: 317 GTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRK 376
           GTKR+D+   G+RE+QRTMLELLNQLDGF S   +KVI ATNR + LDPAL+R GR+DRK
Sbjct: 277 GTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNRADILDPALMRSGRLDRK 336

Query: 377 IEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAG 409
           IEFP P  + R RI QIH+ +M +  DVN EE   + D+F+GA +KA+C EAG
Sbjct: 337 IEFPHPTEEARGRILQIHSRKMNVNADVNFEELARSTDDFNGAQLKAVCVEAG 388

[Close]

BLAST of CmaCh02G017010 vs. TAIR 10
Match: AT3G05530.1 (regulatory particle triple-A ATPase 5A )

HSP 1 Score: 317.0 bits (811), Expect = 2.4e-86
Identity = 162/353 (45.89%), Postives = 231/353 (65.44%), Query Frame = 0


Query: 77  LLMEEEFVTNQERLKPQEEKAEEDRSKVDDLRGSPMSVGNLEELIDENH----------- 136
           +L E+   TN E     +EK +E++ K+   +  P  VGN+ E+++ N            
Sbjct: 38  ILKEDAQRTNLE-CDSYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANI 97

Query: 137 ----------AIVSSSVGPEYYVGIMSFVDKDQLEPGCAILMHNKVLSVVGLLQDEVDPM 196
                      ++ +S     ++ ++  VD D L+PG  + ++     ++  L  E D  
Sbjct: 98  DLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSR 157

Query: 197 VSVMKVEKAPLESYADIGGLDAQIQEIKEAVELPLTHPELYEDIGIRPPKGVILYGEPGT 256
           V  M+V++ P E Y DIGGL+ QIQE+ EA+ LP+TH E +E +G+RPPKGV+LYG PGT
Sbjct: 158 VKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGT 217

Query: 257 GKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAV 316
           GKTL+A+A A  T+ATFL++ G +L+Q ++GDG KLVR+ F++A + +P I+FIDEIDA+
Sbjct: 218 GKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAPCIIFIDEIDAI 277

Query: 317 GTKRYDAHSGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRK 376
           GTKR+D+   G+RE+QRTMLELLNQLDGF S   +KVI ATNR + LDPAL+R GR+DRK
Sbjct: 278 GTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNRADILDPALMRSGRLDRK 337

Query: 377 IEFPLPDIKTRRRIFQIHTSRMTLADDVNLEEFVMTKDEFSGADIKAICTEAG 409
           IEFP P  + R RI QIH+ +M +  DVN EE   + D+F+GA +KA+C EAG
Sbjct: 338 IEFPHPTEEARARILQIHSRKMNVHPDVNFEELARSTDDFNGAQLKAVCVEAG 389

The following BLAST results are available for this feature:

BLAST of CmaCh02G017010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SZD4	7.7e-215	90.76	26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9SL67	1.7e-214	90.76	26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana OX=3702 GN...	[more]
P46466	1.7e-209	88.53	26S proteasome regulatory subunit 4 homolog OS=Oryza sativa subsp. japonica OX=3...	[more]
P48601	7.3e-181	80.46	26S proteasome regulatory subunit 4 OS=Drosophila melanogaster OX=7227 GN=Rpt2 P...	[more]
P62191	1.8e-179	77.94	26S proteasome regulatory subunit 4 OS=Homo sapiens OX=9606 GN=PSMC1 PE=1 SV=1	[more]

BLAST of CmaCh02G017010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G29040.1	5.5e-216	90.76	regulatory particle AAA-ATPase 2A	[more]
AT2G20140.1	1.2e-215	90.76	AAA-type ATPase family protein	[more]
AT5G58290.1	1.1e-102	50.00	regulatory particle triple-A ATPase 3	[more]
AT1G09100.1	1.4e-86	47.03	26S proteasome AAA-ATPase subunit RPT5B	[more]
AT3G05530.1	2.4e-86	45.89	regulatory particle triple-A ATPase 5A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 223..362 e-value: 3.6E-20 score: 83.0
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 227..360 e-value: 3.3E-40 score: 137.6
None	No IPR available	GENE3D	2.40.50.140		coord: 112..179 e-value: 2.6E-24 score: 86.8
None	No IPR available	GENE3D	1.10.8.60		coord: 362..433 e-value: 1.9E-16 score: 61.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..34
None	No IPR available	PANTHER	PTHR23073:SF111	BNAA08G13550D PROTEIN	coord: 17..423
None	No IPR available	PANTHER	PTHR23073	26S PROTEASOME REGULATORY SUBUNIT	coord: 17..423
None	No IPR available	CDD	cd00009	AAA	coord: 193..360 e-value: 3.24192E-27 score: 104.15
IPR032501	Proteasomal ATPase OB C-terminal domain	PFAM	PF16450	Prot_ATP_ID_OB	coord: 114..167 e-value: 4.9E-10 score: 39.3
IPR005937	26S proteasome regulatory subunit P45-like	TIGRFAM	TIGR01242	TIGR01242	coord: 80..413 e-value: 1.3E-132 score: 440.3
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 180..360 e-value: 3.3E-68 score: 231.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 188..411
IPR003960	ATPase, AAA-type, conserved site	PROSITE	PS00674	AAA	coord: 330..348

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G017010.1	CmaCh02G017010.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901800	positive regulation of proteasomal protein catabolic process
biological_process	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process	GO:0030163	protein catabolic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0008540	proteasome regulatory particle, base subcomplex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0036402	proteasome-activating activity