CmaCh02G015930 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G015930
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	two-component response regulator-like APRR2 isoform X1
Location	Cma_Chr02: 9059653 .. 9063462 (+)
RNA-Seq Expression	CmaCh02G015930
Synteny	CmaCh02G015930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTGCACTGCCGACGATTTACAAGAATGGAAAGACTTTCCTAAGGGTCTGAGGGTTCTTCTCCTTGATCGGGACAGCCGCTCCGCTACCGAGATAAGAGCAAAACTTGAGGAAATGGAGCATGTTGGTGAGACATTTCGCACTCCCCATTTTTTTTCTGTTCAAGATGTTTTTCTGTTAAAGATCCTCTTTCACTTAAGGCACTCTTAAACTAGGCTTACTTTGGCCAAGGCCAAAATAAAACTTCCTACCAAAATAGAAAATTAATGAAAGTTCACTTACCAAAACTATGTTTAAACTTTTTCTTTTAAAAAGATATGTAACAATAATCAGATATATTGTGGGTGAGTTGCAGTTATGAACGGATAGAAAATGCACTCCTACTTTGTACGACGACTTTAGAGTTTCATTATTTCTTCCACAAAATGTGTGTTTCCAAATATTAATTTGTTGAAGATCTGACTTCTCTCTATTATGATGCCATTTCCACGTTCTCTCTATTCCTTTAAGAAGTTTTCTTTCTAGTTTCTTTTCTATTATATAAAGATTTCACTTCTGTGTTAAGAAGTTTCACTTCGCATATTGCAGTCTATTACTGTAATGATGAGAAGGAAGCTTTGTCAGCGATTATGAACACACCGGAAAACTTCCATATTGCAATTCTGGAGGTATGGCTAGTCACTTCCATAATGGAATTATGCATGTAGGCCGTAAGCTGACTCCTTAAGTTCGCTTGCTTGATAATATCCAGTTCTCGTGAGGATTGGACCATTTTCAGCAGTAATTTAACTGTTATTGTTTATTTCCTTCAACTAACTTAGTTAAATTCTTTTTCATTTCTCTCATCATTTTCAAATTTTAGTTCCTTATTGTTCTTGTAGTAACATTTAAATTCTTGGTTCCTTCTCTGATTCAGATGTGCGAAGGAAATTATGATGAGAGTTTTAAATTGCTTGGAAGTTCCAAGGACTTGCCAATCATAAGTAAGTTAACAACCAAAACTGGTTTCTTCTCAAAGGAAAAAAGACGGTTTTGAATAGCGAACTGTGGGAAGTTTTTGAAAGCTTCCTCCAACAAACTTTACGGTTCGTGACCTGACTCTGAGATTATGTTGTTCTATGGCACAGTGACTTCAGATGTTTATTGCCTAAGTACCATGATGAAGTGCATTGCAGTAAGAACTCCAATCTAGTTTCTCTTTAACCGGTCTTTTTGGTAATTCTAAAATTAGATTTTAATTCCTTTCAAGGGTTCCTTAGGGACCGGAAACCATGTATGTTTTGCAATAACTGGTTCTGGTATCTACTTCTTTTGTTGGTCTGAGAAACCAGTTTCTAAACAAAGCTAGTATCTATAATTTTTATTTGGTTTACAGCAGAAATTGACGCTTAGATTATAACTATGGTTTTGCATTATTGTCTATGGATCAAGATTTACAATTTTCGTTTAGCTTGGTGCAGTTGAGTTCTTGCTGAAACCACTCTCTGAGGACAAACTGAGGAATATCTGGCAGCATGTTCTTCACAAGGTATTTTCAATTCTGGCAAAATTTGTATTGCTAAAGAACATCGAATATAAAGACAAAATATTGACCAGCAATGTTTTGAGTAGGCATTTTCCAGTACACCGAAGCCTGAAGTAGACTCCGCAGCATCCTTGATGCAGCTCCAATTAGAGAGTGAAGACAATAATGGAGTTCTGGAAGATACGGAAGGTCTTTCTTGGATTCAAGACATTGTATGGGAGCAAGAGCAACCAGAAGGAAATGTTAACTCTCAACTGAACCAGGGATCATCGATGCAAGGTTGCTGGGAAAGTGGAGATCAAATGAACTGTCCAATGGAAACAGATTGCAGTGACAAAGATGTGCAGTCTAACTTCGTCGAAACTACTTCACATGATTTGGTTTGTGAAGATACCCTTCAGGAGCGCCAACCTCGATTATCTGGCAACGTAATGGTCAAAGAAGATGAGAACTCTGCAGTTGGTTTAATCGCAGAAAGCGACATTTATCTTCCCTTGCAGAATAAATGTGGCGTCAAAAGTGGTCCTTCAGCAGCAGAGCACTCAATCCAAGGATCTGATGTGAACCCTTCAGCTGGTTCCAAATCGAAGAAAACAAAGGTACTTTGATTATCTGATACAAAAACGCTAAATTTTGAGAAGTGCCTTAGACATGTATTCTCAAATTACTCTGCATCATGTTTTGAACTGCGACTTCTACTGTCCATTAGGTGGACTGGAGCCCAGAGCTACATAGAAAGTTTATTCAGGCAGTCGAACAGTTGGGCATAGATCGTGCGATTCCTTCCAAAATACTTGAGCTGATGAAAGTTGAAGGTTTGACAAGGCACAACGTTGCAAGTCATCTCCAGGTTTCCCACGGGGCTTTGTTCTTCCATATTCTAAAACTTCACCTCTAATTGCTTAGTTAACTTGCAAAATGAACACCACATTGGTTTTCCTGTTTTTAAGTACATTGATTTACTTCGTTTTTGCAGAAGTACAGGATGCAAAAAAAACATGCGGTCCACAGAGAAGAAAATCCAAGATTTTCAATGCTAACCAATCACTTGAAACCGAACATGGCTTACCTTTCTTATTATCCGTACTGTGGAATATCCATGTCCGCTGTTTATCGAACATGGATACAGAACAATGGCCAACCAGCTAGTGTCAACATGTGGGGTCCGCCTGATTATCGCCATTGGCCGCAACCAGGAACTCAGCCATGGAATTCTTATGCTGGGGTAACGTTTTTCATTCTTAGATTTCACTGTGAAACAACGAGATTCCATCCAAATTAATAACCTTGTATGAAACAGCATTTGAAAAACAGTAACATGTTTTTTTTTTAAATAAAAAAAAAAATCTTGTTTTCATGTAATTTTTTTTTTTTTATAAAAAAAAAAAAAACAAAAATCTCGATGTCACTAACTTGTTAAAGCTACTGGTCCTTGAGAACAAACAAAATGGTAAAATAATTAAAAATTTTGAAAAATGTCGTTTGTGATAATAGTTGTTCAAACTTATTTGTTTCAGATGCAAGCTGATGCATGGGGTTGCCCTGTGATGCTGCCTTCTCGTGCACCATATTTTTCATATCCTCAGGTGAGAGAGTTTTTTTTTTTTTTTTTTTTTTTTAATATTTCTTGCAAGAGTTAAACTGAAAATAACTTTTTTATTTGGTGTAATCATGGCAGTTATTATTATTATTTTTATTTTTTGCCATATTGCAGCAAATTTCATCATCACACAATGTGTATACAGCAAATGAGAGCTATGGCACGCCTCACAGTTCATTTGATATTCAACCAGTAAATATAATCCTCCTTTTCTCTTACATTACATAATTTCTTGATACAAAATGAGCTATTTGTTTTGATAAATTATAGCAAGTATCATATTGATTTGATATTATATTCCTACCAAAAAATAGGTATAAGATGGAATTTAAATAATTAATTATAGTCATTATTTTTGGTAGGATGAGGAGCTGATTGACAAGATTGTGAAGGAGGCGAGGAGGAAACCATTGTCACCCCTTCCCTTGGGGCTTAAACCTCCTTCTGCAGAGAGTGTTCTCAAAGAACTTTCAAAGAAAGGAATCTCCACCGTTCCTCCTCGAATCAACGGCTCCAAACCTCCCTGATCCCACTCCATGATGATTGATTTTGGCTGAAGGTTGTTAAACATTAACACCTGTCTTTCTATGAAATAATACAAATGTAATATAAATGTATTTGGATTTAATTACAAATTTACTTCTTGACATTTCAATTTTATTTCAATCATTTTAATATTCAC

mRNA sequence

ATGGTTTGCACTGCCGACGATTTACAAGAATGGAAAGACTTTCCTAAGGGTCTGAGGGTTCTTCTCCTTGATCGGGACAGCCGCTCCGCTACCGAGATAAGAGCAAAACTTGAGGAAATGGAGCATGTTGTCTATTACTGTAATGATGAGAAGGAAGCTTTGTCAGCGATTATGAACACACCGGAAAACTTCCATATTGCAATTCTGGAGATGTGCGAAGGAAATTATGATGAGAGTTTTAAATTGCTTGGAAGTTCCAAGGACTTGCCAATCATAATGACTTCAGATGTTTATTGCCTAAGTACCATGATGAAGTGCATTGCACTTGGTGCAGTTGAGTTCTTGCTGAAACCACTCTCTGAGGACAAACTGAGGAATATCTGGCAGCATGTTCTTCACAAGGCATTTTCCAGTACACCGAAGCCTGAAGTAGACTCCGCAGCATCCTTGATGCAGCTCCAATTAGAGAGTGAAGACAATAATGGAGTTCTGGAAGATACGGAAGGTCTTTCTTGGATTCAAGACATTGTATGGGAGCAAGAGCAACCAGAAGGAAATGTTAACTCTCAACTGAACCAGGGATCATCGATGCAAGGTTGCTGGGAAAGTGGAGATCAAATGAACTGTCCAATGGAAACAGATTGCAGTGACAAAGATGTGCAGTCTAACTTCGTCGAAACTACTTCACATGATTTGGTTTGTGAAGATACCCTTCAGGAGCGCCAACCTCGATTATCTGGCAACGTAATGGTCAAAGAAGATGAGAACTCTGCAGTTGGTTTAATCGCAGAAAGCGACATTTATCTTCCCTTGCAGAATAAATGTGGCGTCAAAAGTGGTCCTTCAGCAGCAGAGCACTCAATCCAAGGATCTGATGTGAACCCTTCAGCTGGTTCCAAATCGAAGAAAACAAAGGTGGACTGGAGCCCAGAGCTACATAGAAAGTTTATTCAGGCAGTCGAACAGTTGGGCATAGATCGTGCGATTCCTTCCAAAATACTTGAGCTGATGAAAGTTGAAGGTTTGACAAGGCACAACGTTGCAAGTCATCTCCAGAAGTACAGGATGCAAAAAAAACATGCGGTCCACAGAGAAGAAAATCCAAGATTTTCAATGCTAACCAATCACTTGAAACCGAACATGGCTTACCTTTCTTATTATCCGTACTGTGGAATATCCATGTCCGCTGTTTATCGAACATGGATACAGAACAATGGCCAACCAGCTAGTGTCAACATGTGGGGTCCGCCTGATTATCGCCATTGGCCGCAACCAGGAACTCAGCCATGGAATTCTTATGCTGGGATGCAAGCTGATGCATGGGGTTGCCCTGTGATGCTGCCTTCTCGTGCACCATATTTTTCATATCCTCAGCAAATTTCATCATCACACAATGTGTATACAGCAAATGAGAGCTATGGCACGCCTCACAGTTCATTTGATATTCAACCAGATGAGGAGCTGATTGACAAGATTGTGAAGGAGGCGAGGAGGAAACCATTGTCACCCCTTCCCTTGGGGCTTAAACCTCCTTCTGCAGAGAGTGTTCTCAAAGAACTTTCAAAGAAAGGAATCTCCACCGTTCCTCCTCGAATCAACGGCTCCAAACCTCCCTGATCCCACTCCATGATGATTGATTTTGGCTGAAGGTTGTTAAACATTAACACCTGTCTTTCTATGAAATAATACAAATGTAATATAAATGTATTTGGATTTAATTACAAATTTACTTCTTGACATTTCAATTTTATTTCAATCATTTTAATATTCAC

Coding sequence (CDS)

ATGGTTTGCACTGCCGACGATTTACAAGAATGGAAAGACTTTCCTAAGGGTCTGAGGGTTCTTCTCCTTGATCGGGACAGCCGCTCCGCTACCGAGATAAGAGCAAAACTTGAGGAAATGGAGCATGTTGTCTATTACTGTAATGATGAGAAGGAAGCTTTGTCAGCGATTATGAACACACCGGAAAACTTCCATATTGCAATTCTGGAGATGTGCGAAGGAAATTATGATGAGAGTTTTAAATTGCTTGGAAGTTCCAAGGACTTGCCAATCATAATGACTTCAGATGTTTATTGCCTAAGTACCATGATGAAGTGCATTGCACTTGGTGCAGTTGAGTTCTTGCTGAAACCACTCTCTGAGGACAAACTGAGGAATATCTGGCAGCATGTTCTTCACAAGGCATTTTCCAGTACACCGAAGCCTGAAGTAGACTCCGCAGCATCCTTGATGCAGCTCCAATTAGAGAGTGAAGACAATAATGGAGTTCTGGAAGATACGGAAGGTCTTTCTTGGATTCAAGACATTGTATGGGAGCAAGAGCAACCAGAAGGAAATGTTAACTCTCAACTGAACCAGGGATCATCGATGCAAGGTTGCTGGGAAAGTGGAGATCAAATGAACTGTCCAATGGAAACAGATTGCAGTGACAAAGATGTGCAGTCTAACTTCGTCGAAACTACTTCACATGATTTGGTTTGTGAAGATACCCTTCAGGAGCGCCAACCTCGATTATCTGGCAACGTAATGGTCAAAGAAGATGAGAACTCTGCAGTTGGTTTAATCGCAGAAAGCGACATTTATCTTCCCTTGCAGAATAAATGTGGCGTCAAAAGTGGTCCTTCAGCAGCAGAGCACTCAATCCAAGGATCTGATGTGAACCCTTCAGCTGGTTCCAAATCGAAGAAAACAAAGGTGGACTGGAGCCCAGAGCTACATAGAAAGTTTATTCAGGCAGTCGAACAGTTGGGCATAGATCGTGCGATTCCTTCCAAAATACTTGAGCTGATGAAAGTTGAAGGTTTGACAAGGCACAACGTTGCAAGTCATCTCCAGAAGTACAGGATGCAAAAAAAACATGCGGTCCACAGAGAAGAAAATCCAAGATTTTCAATGCTAACCAATCACTTGAAACCGAACATGGCTTACCTTTCTTATTATCCGTACTGTGGAATATCCATGTCCGCTGTTTATCGAACATGGATACAGAACAATGGCCAACCAGCTAGTGTCAACATGTGGGGTCCGCCTGATTATCGCCATTGGCCGCAACCAGGAACTCAGCCATGGAATTCTTATGCTGGGATGCAAGCTGATGCATGGGGTTGCCCTGTGATGCTGCCTTCTCGTGCACCATATTTTTCATATCCTCAGCAAATTTCATCATCACACAATGTGTATACAGCAAATGAGAGCTATGGCACGCCTCACAGTTCATTTGATATTCAACCAGATGAGGAGCTGATTGACAAGATTGTGAAGGAGGCGAGGAGGAAACCATTGTCACCCCTTCCCTTGGGGCTTAAACCTCCTTCTGCAGAGAGTGTTCTCAAAGAACTTTCAAAGAAAGGAATCTCCACCGTTCCTCCTCGAATCAACGGCTCCAAACCTCCCTGA

Protein sequence

MVCTADDLQEWKDFPKGLRVLLLDRDSRSATEIRAKLEEMEHVVYYCNDEKEALSAIMNTPENFHIAILEMCEGNYDESFKLLGSSKDLPIIMTSDVYCLSTMMKCIALGAVEFLLKPLSEDKLRNIWQHVLHKAFSSTPKPEVDSAASLMQLQLESEDNNGVLEDTEGLSWIQDIVWEQEQPEGNVNSQLNQGSSMQGCWESGDQMNCPMETDCSDKDVQSNFVETTSHDLVCEDTLQERQPRLSGNVMVKEDENSAVGLIAESDIYLPLQNKCGVKSGPSAAEHSIQGSDVNPSAGSKSKKTKVDWSPELHRKFIQAVEQLGIDRAIPSKILELMKVEGLTRHNVASHLQKYRMQKKHAVHREENPRFSMLTNHLKPNMAYLSYYPYCGISMSAVYRTWIQNNGQPASVNMWGPPDYRHWPQPGTQPWNSYAGMQADAWGCPVMLPSRAPYFSYPQQISSSHNVYTANESYGTPHSSFDIQPDEELIDKIVKEARRKPLSPLPLGLKPPSAESVLKELSKKGISTVPPRINGSKPP

Homology

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BLAST of CmaCh02G015930 vs. ExPASy Swiss-Prot
Match: Q6LA43 (Two-component response regulator-like APRR2 OS=Arabidopsis thaliana OX=3702 GN=APRR2 PE=2 SV=2)

HSP 1 Score: 325.5 bits (833), Expect = 1.2e-87
Identity = 221/565 (39.12%), Postives = 314/565 (55.58%), Query Frame = 0


Query: 1   MVCTADDLQEWKDFPKGLRVLLL------DRDSRSATEIRAKLEEMEHVVYYCNDEKEAL 60
           MV TA+DL +W++FPKGL+VLLL      D D  SA E R++LE M+++V    DE EAL
Sbjct: 1   MVITANDLSKWENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEAL 60

Query: 61  SAIMNTPENFHIAILEMCEGNYDESFKLLGSSKD-LPIIMTSDVYCLSTMMKCIALGAVE 120
           SA++  PE+FHIAI+E+      ESFK L ++KD LP IM S  +C++T MKCIALGAVE
Sbjct: 61  SAVVKNPESFHIAIVEVNMSAESESFKFLEAAKDVLPTIMISTDHCITTTMKCIALGAVE 120

Query: 121 FLLKPLSEDKLRNIWQHVLHKAF-------SSTPKPEVDSAASLMQLQLESEDNNGVLED 180
           FL KPLS +KL+NIWQHV+HKAF       S + KP  +S  S++ L+ +       +E+
Sbjct: 121 FLQKPLSPEKLKNIWQHVVHKAFNDGGSNVSISLKPVKESVVSMLHLETDM-----TIEE 180

Query: 181 TEGLSWIQDIVWEQEQPEGNVNSQLNQGSSMQGCWESGDQMNCPMETDCSDKDVQSNFVE 240
            +       +  +    +G+    +N   SM+    S ++ N     D      +S  V+
Sbjct: 181 KDPAPSTPQLKQDSRLLDGDCQENIN--FSMENVNSSTEKDNMEDHQDIG----ESKSVD 240

Query: 241 TTSHDLVCEDTLQERQPRLSGNVMVKEDENSAVGLIAESDIYLPLQNKCGVKSGPSAAEH 300
           TT+  L  +D +  ++ R       KE+E     LI+E    + +  K          + 
Sbjct: 241 TTNRKL-DDDKVVVKEERGDSE---KEEEGETGDLISEKTDSVDIHKK------EDETKP 300

Query: 301 SIQGSDVNPSAGSKSKKTKVDWSPELHRKFIQAVEQLGIDRAIPSKILELMKVEGLTRHN 360
             + S +   +G+K+ + KVDW+PELH+KF+QAVEQLG+D+AIPS+ILELMKV  LTRHN
Sbjct: 301 INKSSGIKNVSGNKTSRKKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHN 360

Query: 361 VASHLQKYRMQKKHAVHREE-NPRFSMLTNHLKPNMAYLSYYPYCGISMSAVYRTW-IQN 420
           VASHLQK+R  +K+ + +++ N R+     + +PN    + +      + A Y  W +  
Sbjct: 361 VASHLQKFRQHRKNILPKDDHNHRWIQSRENHRPNQRNYNVFQQQHRPVMA-YPVWGLPG 420

Query: 421 NGQPASVNMWGPPDYRHWPQPGTQPWN-SYAGMQADAWGCPVMLPSRAPY---------- 480
              P ++    PP  +   QP    W   Y  +  +AWGCPV  P    Y          
Sbjct: 421 VYPPGAIPPLWPPPLQSIGQPPPWHWKPPYPTVSGNAWGCPVGPPVTGSYITPSNTTAGG 480

Query: 481 FSYPQQISSSHNVYTANESYGTPHSSFDIQPDEELIDKIVKEARRKPLSPLPLGLKPPSA 536
           F YP    +   +  A+            QPDEE++D++VKEA  KP  PLPLGLKPPSA
Sbjct: 481 FQYPNGAETGFKIMPAS------------QPDEEMLDQVVKEAISKPWLPLPLGLKPPSA 531

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BLAST of CmaCh02G015930 vs. ExPASy Swiss-Prot
Match: Q9FFH0 (Transcription activator GLK2 OS=Arabidopsis thaliana OX=3702 GN=GLK2 PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 3.2e-37
Identity = 98/241 (40.66%), Postives = 132/241 (54.77%), Query Frame = 0


Query: 302 KKTKVDWSPELHRKFIQAVEQLGIDRAIPSKILELMKVEGLTRHNVASHLQKYRMQKKHA 361
           KK KVDW+PELHRKF+QAVEQLG+D+A+PS+ILE+M V+ LTRHNVASHLQKYR  +KH 
Sbjct: 146 KKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKHL 205

Query: 362 VHREENPRFSMLTNHLK---PNMAYLSYYPYCGISMSAVYRTWIQNNGQPASVNMWGPPD 421
           + RE       L  H     P +      P+   ++         ++G    +++WG P 
Sbjct: 206 LAREAEAASWNLRRHATVAVPGVGGGGKKPWTAPALGYPPHVAPMHHGHFRPLHVWGHPT 265

Query: 422 Y-RHWPQPGTQPWNSYAGMQADAWGCPVMLPSRAPYFS----YPQ---QISSSH-NVYTA 481
           + +H P        +Y  M A A   P   P   PY+     YPQ     SS+H ++   
Sbjct: 266 WPKHKPNTPASAHRTYP-MPAIA-AAPASWPGHPPYWHQQPLYPQGYGMASSNHSSIGVP 325

Query: 482 NESYGTPHSSFDIQPDEELIDKIVKEARRKPLSPLPLGLKPPSAESVLKELSKKGISTVP 531
               G  +   DI P  E ID  + +   KP  PLPLGLKPPS + V+ EL ++G+S VP
Sbjct: 326 TRQLGPTNPPIDIHPSNESIDAAIGDVISKPWLPLPLGLKPPSVDGVMTELQRQGVSNVP 384

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BLAST of CmaCh02G015930 vs. ExPASy Swiss-Prot
Match: Q9SIV3 (Transcription activator GLK1 OS=Arabidopsis thaliana OX=3702 GN=GLK1 PE=1 SV=2)

HSP 1 Score: 135.6 bits (340), Expect = 1.7e-30
Identity = 91/265 (34.34%), Postives = 130/265 (49.06%), Query Frame = 0


Query: 302 KKTKVDWSPELHRKFIQAVEQLGIDRAIPSKILELMKVEGLTRHNVASHLQKYRMQKKHA 361
           +K KVDW+PELHR+F++AVEQLG+D+A+PS+ILELM V  LTRHNVASHLQKYR  +KH 
Sbjct: 152 RKVKVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRHNVASHLQKYRSHRKHL 211

Query: 362 VHREENPRFSMLTNHL-----------KPNMAYLSYYPYCGISMS---AVYRTWIQNNGQ 421
           + RE          H+           +    +L+  P  G       AV    + ++  
Sbjct: 212 LAREAEAANWTRKRHIYGVDTGANLNGRTKNGWLAPAPTLGFPPPPPVAVAPPPVHHH-H 271

Query: 422 PASVNMWGPPDY----------RHWPQPGT-QPWNSYAGMQADAW-----GCPVMLPSRA 481
              +++WG P            +H P P T  P   +    +  W     G    LP+ A
Sbjct: 272 FRPLHVWGHPTVDQSIMPHVWPKHLPPPSTAMPNPPFWVSDSPYWHPMHNGTTPYLPTVA 331

Query: 482 ------PYFSYPQQISSSHNVYTANESYGTPHSSFDIQPDEELIDKIVKEARRKPLSPLP 531
                 P    P  +   H +Y  N  +G      D+ P +E +D  + +   +P  PLP
Sbjct: 332 TRFRAPPVAGIPHALPPHHTMYKPNLGFGGARPPVDLHPSKESVDAAIGDVLTRPWLPLP 391

[Close]

BLAST of CmaCh02G015930 vs. ExPASy Swiss-Prot
Match: Q5Z5I4 (Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica OX=39947 GN=GLK1 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.4e-29
Identity = 101/318 (31.76%), Postives = 137/318 (43.08%), Query Frame = 0


Query: 279 SGPSAAEHSIQGSDVNPSAGSKS----KKTKVDWSPELHRKFIQAVEQLGIDRAIPSKIL 338
           S PS+   S Q ++    + SKS    KK KVDW+PELHR+F+QAVEQLGID+A+PS+IL
Sbjct: 152 SSPSSTTSSSQEAESRHKSSSKSSHGKKKAKVDWTPELHRRFVQAVEQLGIDKAVPSRIL 211

Query: 339 ELMKVEGLTRHNVASHLQKYRMQKKHAVHREENPRFSMLTNHLKPNMAYLSYYPYCGISM 398
           E+M ++ LTRHN+ASHLQKYR  +KH + RE                ++           
Sbjct: 212 EIMGIDSLTRHNIASHLQKYRSHRKHMIAREAEA------------ASWTQRRQIYAAGG 271

Query: 399 SAVYRTWIQNNGQPASVNMWGPPDYRHWPQPGTQPWNSYAGMQADAWGCPVMLPSRAPYF 458
            AV +    N     ++    PP     P P   P   +A      WG P M PSR P +
Sbjct: 272 GAVAKRPESNAWTVPTIGFPPPPP----PPPSPAPIQHFA-RPLHVWGHPTMDPSRVPVW 331

Query: 459 -----------------SYPQQISSSHNVYTANESY----GTP----------------- 518
                              P   +  H+ Y    ++    GTP                 
Sbjct: 332 PPRHLVPRGPAPPWVPPPPPSDPAFWHHPYMRGPAHVPTQGTPCMAMPMPAARFPAPPVP 391

Query: 519 ------------------------HSSFDIQPDEELIDKIVKEARRKPLSPLPLGLKPPS 531
                                        +QP  E ID  + +   KP  PLPLGLKPPS
Sbjct: 392 GVVPCPMYRPLTPPALASKNQQDAQLQLQVQPSSESIDAAIGDVLSKPWLPLPLGLKPPS 451

[Close]

BLAST of CmaCh02G015930 vs. ExPASy Swiss-Prot
Match: Q5NAN5 (Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica OX=39947 GN=GLK2 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 4.3e-26
Identity = 114/353 (32.29%), Postives = 153/353 (43.34%), Query Frame = 0


Query: 281 PSAAEHSIQ---GSDVNPSAGSKS---KKTKVDWSPELHRKFIQAVEQLGIDRAIPSKIL 340
           PSA  HS +    S  + +AG  S   +K KVDW+PELHR+F+QAVEQLGID+A+PS+IL
Sbjct: 187 PSAEGHSKRKPSSSSSSAAAGKNSHGKRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRIL 246

Query: 341 ELMKVEGLTRHNVASHLQKYRMQKKHAVHREE-------------------------NPR 400
           ELM +E LTRHN+ASHLQKYR  +KH + RE                           PR
Sbjct: 247 ELMGIECLTRHNIASHLQKYRSHRKHLMAREAEAASWTQKRQMYTAAAAAAAVAAGGGPR 306

Query: 401 ------FSMLTNHLKPNMAYLSYY------------PYC-------GISMSAVYRTWI-- 460
                  + +   + P + +   +            P+C       G   + V  T    
Sbjct: 307 KDAAAATAAVAPWVMPTIGFPPPHAAAMVPPPPHPPPFCRPPLHVWGHPTAGVEPTTAAA 366

Query: 461 ----QNNGQPASVNMW----GPPD--------YRHWPQP------GTQPWNSYA--GMQA 520
                 + QP  + +W     PP         + H P P        Q +N+    G QA
Sbjct: 367 PPPPSPHAQPPLLPVWPRHLAPPPPPLPAAWAHGHQPAPVDPAAYWQQQYNAARKWGPQA 426

Query: 521 DAWGCPVMLP--------SRAPYFSYPQQISSSHNVYTANESYGTPHSS--------FDI 536
              G P M P         R P    P  +   H +Y        P  +         D 
Sbjct: 427 VTPGTPCMPPPLPPAAMLQRFPVPPVPGMV--PHPMYRPIPPPSPPQGNKLAALQLQLDA 486

[Close]

BLAST of CmaCh02G015930 vs. TAIR 10
Match: AT4G18020.1 (CheY-like two-component responsive regulator family protein )

HSP 1 Score: 325.5 bits (833), Expect = 8.2e-89
Identity = 221/565 (39.12%), Postives = 314/565 (55.58%), Query Frame = 0


Query: 1   MVCTADDLQEWKDFPKGLRVLLL------DRDSRSATEIRAKLEEMEHVVYYCNDEKEAL 60
           MV TA+DL +W++FPKGL+VLLL      D D  SA E R++LE M+++V    DE EAL
Sbjct: 1   MVITANDLSKWENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEAL 60

Query: 61  SAIMNTPENFHIAILEMCEGNYDESFKLLGSSKD-LPIIMTSDVYCLSTMMKCIALGAVE 120
           SA++  PE+FHIAI+E+      ESFK L ++KD LP IM S  +C++T MKCIALGAVE
Sbjct: 61  SAVVKNPESFHIAIVEVNMSAESESFKFLEAAKDVLPTIMISTDHCITTTMKCIALGAVE 120

Query: 121 FLLKPLSEDKLRNIWQHVLHKAF-------SSTPKPEVDSAASLMQLQLESEDNNGVLED 180
           FL KPLS +KL+NIWQHV+HKAF       S + KP  +S  S++ L+ +       +E+
Sbjct: 121 FLQKPLSPEKLKNIWQHVVHKAFNDGGSNVSISLKPVKESVVSMLHLETDM-----TIEE 180

Query: 181 TEGLSWIQDIVWEQEQPEGNVNSQLNQGSSMQGCWESGDQMNCPMETDCSDKDVQSNFVE 240
            +       +  +    +G+    +N   SM+    S ++ N     D      +S  V+
Sbjct: 181 KDPAPSTPQLKQDSRLLDGDCQENIN--FSMENVNSSTEKDNMEDHQDIG----ESKSVD 240

Query: 241 TTSHDLVCEDTLQERQPRLSGNVMVKEDENSAVGLIAESDIYLPLQNKCGVKSGPSAAEH 300
           TT+  L  +D +  ++ R       KE+E     LI+E    + +  K          + 
Sbjct: 241 TTNRKL-DDDKVVVKEERGDSE---KEEEGETGDLISEKTDSVDIHKK------EDETKP 300

Query: 301 SIQGSDVNPSAGSKSKKTKVDWSPELHRKFIQAVEQLGIDRAIPSKILELMKVEGLTRHN 360
             + S +   +G+K+ + KVDW+PELH+KF+QAVEQLG+D+AIPS+ILELMKV  LTRHN
Sbjct: 301 INKSSGIKNVSGNKTSRKKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHN 360

Query: 361 VASHLQKYRMQKKHAVHREE-NPRFSMLTNHLKPNMAYLSYYPYCGISMSAVYRTW-IQN 420
           VASHLQK+R  +K+ + +++ N R+     + +PN    + +      + A Y  W +  
Sbjct: 361 VASHLQKFRQHRKNILPKDDHNHRWIQSRENHRPNQRNYNVFQQQHRPVMA-YPVWGLPG 420

Query: 421 NGQPASVNMWGPPDYRHWPQPGTQPWN-SYAGMQADAWGCPVMLPSRAPY---------- 480
              P ++    PP  +   QP    W   Y  +  +AWGCPV  P    Y          
Sbjct: 421 VYPPGAIPPLWPPPLQSIGQPPPWHWKPPYPTVSGNAWGCPVGPPVTGSYITPSNTTAGG 480

Query: 481 FSYPQQISSSHNVYTANESYGTPHSSFDIQPDEELIDKIVKEARRKPLSPLPLGLKPPSA 536
           F YP    +   +  A+            QPDEE++D++VKEA  KP  PLPLGLKPPSA
Sbjct: 481 FQYPNGAETGFKIMPAS------------QPDEEMLDQVVKEAISKPWLPLPLGLKPPSA 531

[Close]

BLAST of CmaCh02G015930 vs. TAIR 10
Match: AT4G18020.2 (CheY-like two-component responsive regulator family protein )

HSP 1 Score: 325.5 bits (833), Expect = 8.2e-89
Identity = 221/565 (39.12%), Postives = 314/565 (55.58%), Query Frame = 0


Query: 1   MVCTADDLQEWKDFPKGLRVLLL------DRDSRSATEIRAKLEEMEHVVYYCNDEKEAL 60
           MV TA+DL +W++FPKGL+VLLL      D D  SA E R++LE M+++V    DE EAL
Sbjct: 1   MVITANDLSKWENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEAL 60

Query: 61  SAIMNTPENFHIAILEMCEGNYDESFKLLGSSKD-LPIIMTSDVYCLSTMMKCIALGAVE 120
           SA++  PE+FHIAI+E+      ESFK L ++KD LP IM S  +C++T MKCIALGAVE
Sbjct: 61  SAVVKNPESFHIAIVEVNMSAESESFKFLEAAKDVLPTIMISTDHCITTTMKCIALGAVE 120

Query: 121 FLLKPLSEDKLRNIWQHVLHKAF-------SSTPKPEVDSAASLMQLQLESEDNNGVLED 180
           FL KPLS +KL+NIWQHV+HKAF       S + KP  +S  S++ L+ +       +E+
Sbjct: 121 FLQKPLSPEKLKNIWQHVVHKAFNDGGSNVSISLKPVKESVVSMLHLETDM-----TIEE 180

Query: 181 TEGLSWIQDIVWEQEQPEGNVNSQLNQGSSMQGCWESGDQMNCPMETDCSDKDVQSNFVE 240
            +       +  +    +G+    +N   SM+    S ++ N     D      +S  V+
Sbjct: 181 KDPAPSTPQLKQDSRLLDGDCQENIN--FSMENVNSSTEKDNMEDHQDIG----ESKSVD 240

Query: 241 TTSHDLVCEDTLQERQPRLSGNVMVKEDENSAVGLIAESDIYLPLQNKCGVKSGPSAAEH 300
           TT+  L  +D +  ++ R       KE+E     LI+E    + +  K          + 
Sbjct: 241 TTNRKL-DDDKVVVKEERGDSE---KEEEGETGDLISEKTDSVDIHKK------EDETKP 300

Query: 301 SIQGSDVNPSAGSKSKKTKVDWSPELHRKFIQAVEQLGIDRAIPSKILELMKVEGLTRHN 360
             + S +   +G+K+ + KVDW+PELH+KF+QAVEQLG+D+AIPS+ILELMKV  LTRHN
Sbjct: 301 INKSSGIKNVSGNKTSRKKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHN 360

Query: 361 VASHLQKYRMQKKHAVHREE-NPRFSMLTNHLKPNMAYLSYYPYCGISMSAVYRTW-IQN 420
           VASHLQK+R  +K+ + +++ N R+     + +PN    + +      + A Y  W +  
Sbjct: 361 VASHLQKFRQHRKNILPKDDHNHRWIQSRENHRPNQRNYNVFQQQHRPVMA-YPVWGLPG 420

Query: 421 NGQPASVNMWGPPDYRHWPQPGTQPWN-SYAGMQADAWGCPVMLPSRAPY---------- 480
              P ++    PP  +   QP    W   Y  +  +AWGCPV  P    Y          
Sbjct: 421 VYPPGAIPPLWPPPLQSIGQPPPWHWKPPYPTVSGNAWGCPVGPPVTGSYITPSNTTAGG 480

Query: 481 FSYPQQISSSHNVYTANESYGTPHSSFDIQPDEELIDKIVKEARRKPLSPLPLGLKPPSA 536
           F YP    +   +  A+            QPDEE++D++VKEA  KP  PLPLGLKPPSA
Sbjct: 481 FQYPNGAETGFKIMPAS------------QPDEEMLDQVVKEAISKPWLPLPLGLKPPSA 531

[Close]

BLAST of CmaCh02G015930 vs. TAIR 10
Match: AT4G18020.3 (CheY-like two-component responsive regulator family protein )

HSP 1 Score: 325.5 bits (833), Expect = 8.2e-89
Identity = 221/565 (39.12%), Postives = 314/565 (55.58%), Query Frame = 0


Query: 1   MVCTADDLQEWKDFPKGLRVLLL------DRDSRSATEIRAKLEEMEHVVYYCNDEKEAL 60
           MV TA+DL +W++FPKGL+VLLL      D D  SA E R++LE M+++V    DE EAL
Sbjct: 1   MVITANDLSKWENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEAL 60

Query: 61  SAIMNTPENFHIAILEMCEGNYDESFKLLGSSKD-LPIIMTSDVYCLSTMMKCIALGAVE 120
           SA++  PE+FHIAI+E+      ESFK L ++KD LP IM S  +C++T MKCIALGAVE
Sbjct: 61  SAVVKNPESFHIAIVEVNMSAESESFKFLEAAKDVLPTIMISTDHCITTTMKCIALGAVE 120

Query: 121 FLLKPLSEDKLRNIWQHVLHKAF-------SSTPKPEVDSAASLMQLQLESEDNNGVLED 180
           FL KPLS +KL+NIWQHV+HKAF       S + KP  +S  S++ L+ +       +E+
Sbjct: 121 FLQKPLSPEKLKNIWQHVVHKAFNDGGSNVSISLKPVKESVVSMLHLETDM-----TIEE 180

Query: 181 TEGLSWIQDIVWEQEQPEGNVNSQLNQGSSMQGCWESGDQMNCPMETDCSDKDVQSNFVE 240
            +       +  +    +G+    +N   SM+    S ++ N     D      +S  V+
Sbjct: 181 KDPAPSTPQLKQDSRLLDGDCQENIN--FSMENVNSSTEKDNMEDHQDIG----ESKSVD 240

Query: 241 TTSHDLVCEDTLQERQPRLSGNVMVKEDENSAVGLIAESDIYLPLQNKCGVKSGPSAAEH 300
           TT+  L  +D +  ++ R       KE+E     LI+E    + +  K          + 
Sbjct: 241 TTNRKL-DDDKVVVKEERGDSE---KEEEGETGDLISEKTDSVDIHKK------EDETKP 300

Query: 301 SIQGSDVNPSAGSKSKKTKVDWSPELHRKFIQAVEQLGIDRAIPSKILELMKVEGLTRHN 360
             + S +   +G+K+ + KVDW+PELH+KF+QAVEQLG+D+AIPS+ILELMKV  LTRHN
Sbjct: 301 INKSSGIKNVSGNKTSRKKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHN 360

Query: 361 VASHLQKYRMQKKHAVHREE-NPRFSMLTNHLKPNMAYLSYYPYCGISMSAVYRTW-IQN 420
           VASHLQK+R  +K+ + +++ N R+     + +PN    + +      + A Y  W +  
Sbjct: 361 VASHLQKFRQHRKNILPKDDHNHRWIQSRENHRPNQRNYNVFQQQHRPVMA-YPVWGLPG 420

Query: 421 NGQPASVNMWGPPDYRHWPQPGTQPWN-SYAGMQADAWGCPVMLPSRAPY---------- 480
              P ++    PP  +   QP    W   Y  +  +AWGCPV  P    Y          
Sbjct: 421 VYPPGAIPPLWPPPLQSIGQPPPWHWKPPYPTVSGNAWGCPVGPPVTGSYITPSNTTAGG 480

Query: 481 FSYPQQISSSHNVYTANESYGTPHSSFDIQPDEELIDKIVKEARRKPLSPLPLGLKPPSA 536
           F YP    +   +  A+            QPDEE++D++VKEA  KP  PLPLGLKPPSA
Sbjct: 481 FQYPNGAETGFKIMPAS------------QPDEEMLDQVVKEAISKPWLPLPLGLKPPSA 531

[Close]

BLAST of CmaCh02G015930 vs. TAIR 10
Match: AT4G18020.6 (CheY-like two-component responsive regulator family protein )

HSP 1 Score: 325.5 bits (833), Expect = 8.2e-89
Identity = 221/565 (39.12%), Postives = 314/565 (55.58%), Query Frame = 0


Query: 1   MVCTADDLQEWKDFPKGLRVLLL------DRDSRSATEIRAKLEEMEHVVYYCNDEKEAL 60
           MV TA+DL +W++FPKGL+VLLL      D D  SA E R++LE M+++V    DE EAL
Sbjct: 1   MVITANDLSKWENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEAL 60

Query: 61  SAIMNTPENFHIAILEMCEGNYDESFKLLGSSKD-LPIIMTSDVYCLSTMMKCIALGAVE 120
           SA++  PE+FHIAI+E+      ESFK L ++KD LP IM S  +C++T MKCIALGAVE
Sbjct: 61  SAVVKNPESFHIAIVEVNMSAESESFKFLEAAKDVLPTIMISTDHCITTTMKCIALGAVE 120

Query: 121 FLLKPLSEDKLRNIWQHVLHKAF-------SSTPKPEVDSAASLMQLQLESEDNNGVLED 180
           FL KPLS +KL+NIWQHV+HKAF       S + KP  +S  S++ L+ +       +E+
Sbjct: 121 FLQKPLSPEKLKNIWQHVVHKAFNDGGSNVSISLKPVKESVVSMLHLETDM-----TIEE 180

Query: 181 TEGLSWIQDIVWEQEQPEGNVNSQLNQGSSMQGCWESGDQMNCPMETDCSDKDVQSNFVE 240
            +       +  +    +G+    +N   SM+    S ++ N     D      +S  V+
Sbjct: 181 KDPAPSTPQLKQDSRLLDGDCQENIN--FSMENVNSSTEKDNMEDHQDIG----ESKSVD 240

Query: 241 TTSHDLVCEDTLQERQPRLSGNVMVKEDENSAVGLIAESDIYLPLQNKCGVKSGPSAAEH 300
           TT+  L  +D +  ++ R       KE+E     LI+E    + +  K          + 
Sbjct: 241 TTNRKL-DDDKVVVKEERGDSE---KEEEGETGDLISEKTDSVDIHKK------EDETKP 300

Query: 301 SIQGSDVNPSAGSKSKKTKVDWSPELHRKFIQAVEQLGIDRAIPSKILELMKVEGLTRHN 360
             + S +   +G+K+ + KVDW+PELH+KF+QAVEQLG+D+AIPS+ILELMKV  LTRHN
Sbjct: 301 INKSSGIKNVSGNKTSRKKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHN 360

Query: 361 VASHLQKYRMQKKHAVHREE-NPRFSMLTNHLKPNMAYLSYYPYCGISMSAVYRTW-IQN 420
           VASHLQK+R  +K+ + +++ N R+     + +PN    + +      + A Y  W +  
Sbjct: 361 VASHLQKFRQHRKNILPKDDHNHRWIQSRENHRPNQRNYNVFQQQHRPVMA-YPVWGLPG 420

Query: 421 NGQPASVNMWGPPDYRHWPQPGTQPWN-SYAGMQADAWGCPVMLPSRAPY---------- 480
              P ++    PP  +   QP    W   Y  +  +AWGCPV  P    Y          
Sbjct: 421 VYPPGAIPPLWPPPLQSIGQPPPWHWKPPYPTVSGNAWGCPVGPPVTGSYITPSNTTAGG 480

Query: 481 FSYPQQISSSHNVYTANESYGTPHSSFDIQPDEELIDKIVKEARRKPLSPLPLGLKPPSA 536
           F YP    +   +  A+            QPDEE++D++VKEA  KP  PLPLGLKPPSA
Sbjct: 481 FQYPNGAETGFKIMPAS------------QPDEEMLDQVVKEAISKPWLPLPLGLKPPSA 531

[Close]

BLAST of CmaCh02G015930 vs. TAIR 10
Match: AT4G18020.4 (CheY-like two-component responsive regulator family protein )

HSP 1 Score: 269.6 bits (688), Expect = 5.3e-72
Identity = 185/507 (36.49%), Postives = 273/507 (53.85%), Query Frame = 0


Query: 1   MVCTADDLQEWKDFPKGLRVLLL------DRDSRSATEIRAKLEEMEHVVYYCNDEKEAL 60
           MV TA+DL +W++FPKGL+VLLL      D D  SA E R++LE M+++V    DE EAL
Sbjct: 1   MVITANDLSKWENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEAL 60

Query: 61  SAIMNTPENFHIAILEMCEGNYDESFKLLGSSKD-LPIIMTSDVYCLSTMMKCIALGAVE 120
           SA++  PE+FHIAI+E+      ESFK L ++KD LP IM S  +C++T MKCIALGAVE
Sbjct: 61  SAVVKNPESFHIAIVEVNMSAESESFKFLEAAKDVLPTIMISTDHCITTTMKCIALGAVE 120

Query: 121 FLLKPLSEDKLRNIWQHVLHKAF-------SSTPKPEVDSAASLMQLQLESEDNNGVLED 180
           FL KPLS +KL+NIWQHV+HKAF       S + KP  +S  S++ L+ +       +E+
Sbjct: 121 FLQKPLSPEKLKNIWQHVVHKAFNDGGSNVSISLKPVKESVVSMLHLETDM-----TIEE 180

Query: 181 TEGLSWIQDIVWEQEQPEGNVNSQLNQGSSMQGCWESGDQMNCPMETDCSDKDVQSNFVE 240
            +       +  +    +G+    +N   SM+    S ++ N     D      +S  V+
Sbjct: 181 KDPAPSTPQLKQDSRLLDGDCQENIN--FSMENVNSSTEKDNMEDHQDIG----ESKSVD 240

Query: 241 TTSHDLVCEDTLQERQPRLSGNVMVKEDENSAVGLIAESDIYLPLQNKCGVKSGPSAAEH 300
           TT+  L  +D +  ++ R       KE+E     LI+E    + +  K          + 
Sbjct: 241 TTNRKL-DDDKVVVKEERGDSE---KEEEGETGDLISEKTDSVDIHKK------EDETKP 300

Query: 301 SIQGSDVNPSAGSKSKKTKVDWSPELHRKFIQAVEQLGIDRAIPSKILELMKVEGLTRHN 360
             + S +   +G+K+ + KVDW+PELH+KF+QAVEQLG+D+AIPS+ILELMKV  LTRHN
Sbjct: 301 INKSSGIKNVSGNKTSRKKVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHN 360

Query: 361 VASHLQKYRMQKKHAVHREE-NPRFSMLTNHLKPNMAYLSYYPYCGISMSAVYRTW-IQN 420
           VASHLQK+R  +K+ + +++ N R+     + +PN    + +      + A Y  W +  
Sbjct: 361 VASHLQKFRQHRKNILPKDDHNHRWIQSRENHRPNQRNYNVFQQQHRPVMA-YPVWGLPG 420

Query: 421 NGQPASVNMWGPPDYRHWPQPGTQPWN-SYAGMQADAWGCPVMLPSRAPY---------- 480
              P ++    PP  +   QP    W   Y  +  +AWGCPV  P    Y          
Sbjct: 421 VYPPGAIPPLWPPPLQSIGQPPPWHWKPPYPTVSGNAWGCPVGPPVTGSYITPSNTTAGG 480

The following BLAST results are available for this feature:

BLAST of CmaCh02G015930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6LA43	1.2e-87	39.12	Two-component response regulator-like APRR2 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q9FFH0	3.2e-37	40.66	Transcription activator GLK2 OS=Arabidopsis thaliana OX=3702 GN=GLK2 PE=1 SV=1	[more]
Q9SIV3	1.7e-30	34.34	Transcription activator GLK1 OS=Arabidopsis thaliana OX=3702 GN=GLK1 PE=1 SV=2	[more]
Q5Z5I4	1.4e-29	31.76	Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica OX=39947 GN=G...	[more]
Q5NAN5	4.3e-26	32.29	Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica OX=39947 GN=G...	[more]

BLAST of CmaCh02G015930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G18020.1	8.2e-89	39.12	CheY-like two-component responsive regulator family protein	[more]
AT4G18020.2	8.2e-89	39.12	CheY-like two-component responsive regulator family protein	[more]
AT4G18020.3	8.2e-89	39.12	CheY-like two-component responsive regulator family protein	[more]
AT4G18020.6	8.2e-89	39.12	CheY-like two-component responsive regulator family protein	[more]
AT4G18020.4	5.3e-72	36.49	CheY-like two-component responsive regulator family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 303..357 e-value: 3.4E-25 score: 86.1
None	No IPR available	GENE3D	1.10.10.60		coord: 299..361 e-value: 9.1E-28 score: 98.0
None	No IPR available	GENE3D	3.40.50.2300		coord: 11..137 e-value: 3.7E-13 score: 51.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..303
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..305
None	No IPR available	PANTHER	PTHR31312:SF4	TWO-COMPONENT RESPONSE REGULATOR-LIKE APRR2	coord: 1..536
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 306..355 e-value: 1.9E-8 score: 34.4
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 300..359 score: 16.639801
IPR044825	Transcription activator GLK1/2-like	PANTHER	PTHR31312	TRANSCRIPTION ACTIVATOR GLK1	coord: 1..536
IPR001789	Signal transduction response regulator, receiver domain	PROSITE	PS50110	RESPONSE_REGULATORY	coord: 19..132 score: 22.119238
IPR011006	CheY-like superfamily	SUPERFAMILY	52172	CheY-like	coord: 16..139
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 301..359

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G015930.1	CmaCh02G015930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0016310	phosphorylation
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0016301	kinase activity