CmaCh02G015830 (gene) Cucurbita maxima (Rimu) v1.1

Overview


Name	CmaCh02G015830
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu) v1.1)
Description	BOI-related E3 ubiquitin-protein ligase 1
Location	Cma_Chr02: 8988664 .. 8991219 (-)
RNA-Seq Expression	CmaCh02G015830
Synteny	CmaCh02G015830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACAACTCCATCACAAGACGTGGAGATGGGTACAGAAGCAGAGCTGCACGCCCATCAACCACTTTATTTTTGGAATTACTTGTTGATAATCCATGGATTTTAGGGAGGAAAAATAGGGAGAAAAATAAAGATGAAAATCAGTTGGGGAAAAAAAAAAGAAGGGATTTTTTCAAAGATGAAAGAGAGTGATCCTGGAGAAAAGCCAGCACCGATTCCAACCCCACGAGAAGAGAGGAAGAGAAGGAGAGGGAAGCAAAAAAAAGGAGGAGGAGCAGAATAATAAGGCCAACAACAGGGCGCCCTCTCTCTCCCTCTTGGACTCATTCGTTTCAATCGCATCTCTCTCTCTCTCTCCCTTCATTTACTTTCTTTTTTATAACAGAGGAGAGAGGCAGAGAGATTTTGAATTACCCAAACAATGGAGAAAGTTTAGACATAGATAAGAGATTGGAAAGAAAAGCATTATAAAACAAAGAAAGGAAGAAAAGGAAAAGGGAAAGATGGTGAGGAGAAGGGGAAAAATGGTGGTGGTGAAGGTGAAAGTGGTGGTGCCCTCTTACCAGACATAAATTCATTTCCCTACGAACTCCATTCTCTCTCTCTCTCTCCCTCTCTCCTATTCAACACTCCGTCTACTCCTAAGACTTGAGAGGGTGGGAAGAACAGCATCTTCCTTGTCTTTCATGCTTCCCTTATGCTTCCTTTTATTATTGCCATCCTTCATTCCCAATCTTCTTCACGTTGCTCCATAAACACACCCACCACCACCGCCTTCTTTTTTTAACTTCCCTTACTTTTTCTTCTTCTTCATCTTCTCCAAACCTTTCTTCTATCCATCGATTCCTTCTTTGTTTCTCCCCTATGGCTGTTCAGGCTCAATATCCTTCTAATGTTTTGCTCTTAAACAGGTATATACGGATGATTCTGTTTTTCTCTTCTATGCCAATTCTTGATTTGAGGTTTTTCAAATCCCTCATGCTTGGGTTTTGGATTTTGGTTTGCTAATTGCAGAAACGGTCAAGAAGGGCATGATTATCCATTACAGCCACAACCAGGAGGTTTTCTTGACCAGACTCATATGGTGTTTAACAACAGTACAGGCGGTGAGATTTTTGCACATTGTTTTAGGCTGAAATTATTCTTCTGTTAGAACGCCAGAAGTATTTCAATCAATTTGAGTTCGTACCTTTCAATAAATCAATCAATCCGGTTTCTGATGAAAGCAGGAAACAATTCTCGCAAAAGAGGAAGAGAAATTTCAACTGCCATTACGTCCATCGCGGCTCCGATCAATTTCGCTGCGGTACAGCAACCTCGTCCTCCTCTCCTTGTTGACCTCGCCAAACTCCACAACCACCAAAACAATGTCGTCTCCACTGGCCTCCGCCTGTCCTCCGGCGACCATCAACTGAATCAACCGCCGCAACAGCAACATCATCAACAACAGCAACATCATCAACAACAGCAACATCATCAACAACAGCAACATCAACATAATCACAATCTCGTCCCTCAATCATCATCGGCTTTCTTCTCGCTATTATCAGACGATTTCGCCTCTAATTTCAAACGGCAACAAGACGAAATAGATCAATTCCTTCAAGCACAGGTCTCAACTCACTCCATAACGCAGAAACAAATTTCATCTCGAGAGAACTTTTTCTGAATCAGTTTCGTTTTCCATTTCAAAAACAGGAAGAGCAACTGCGGCGCACATTAGCAGAGAAAAGACAGAGACACTACCGTGCGCTTCTGGATGCGGTGGAGAAATCGGTATTCAGAAGATTAAGAGAGAGGGAGGCGGAGGTGGAAAAGGCAACTCGTCGAAACGCCGAGTTAGAAGCACGAGCCGCCCAGCTTAGCATCGAGGCGCAAGTCTGGCAAGCCAAAGCTAGGGCACAAGAAGCCACCGCCGTATCTTTGCAGGCACAACTGCAACGAGCGATGTCCATCGGCGGCGGAGGTGGAGGCGGAGGCGACGGAGGAGATGGCGGCACCGCCGATGATGCCGAGTCGGCTCACATTGACCCGGACCGAGTCGCTATTTTGGGACCGAGTTGCAGAGAGTGTAGAAAGCGCTTGGCGTCGGTGGTGCTTTTGCCGTGCCGTCATCTCTGCCTCTGTACAGACTGTGATCGAGTGGCTCAGACTTGCCCGTTGTGCCACATTCAGCGAAGCTCCAGCGTAGAGGTCTATCTCTCGTAGGGCCCAATCCCACGGCCCAATGCGGGTTACGCCCATAAACCGGCCCAGACAGTTCAATTGGCGGTTTTTTTCCTTCTTTTTTCCTTAAAATTTTAAAAAAAGTATTTAAGTAATAAAAGAATTACATTACCTTTTTTCATTATTATTTTTCGAAATATTCTGATAGACCATCCGAAACTTTTTTTTTTCCTTCTTTTTGCTTTTTTCTTTTTTGGAATGCCCGTGGAGGTAATGTAAATTGGCCACATTGCGGATTTTCCTTTCTTTTTTTTCTTTTTTTTTTTTAAATTTTAATTTTTATGGAATTTCATTCATTCATCTCCTAAATTATTTATTCAAAAAACTTCTTCAA

mRNA sequence

ACAACTCCATCACAAGACGTGGAGATGGGTACAGAAGCAGAGCTGCACGCCCATCAACCACTTTATTTTTGGAATTACTTGTTGATAATCCATGGATTTTAGGGAGGAAAAATAGGGAGAAAAATAAAGATGAAAATCAGTTGGGGAAAAAAAAAAGAAGGGATTTTTTCAAAGATGAAAGAGAGTGATCCTGGAGAAAAGCCAGCACCGATTCCAACCCCACGAGAAGAGAGGAAGAGAAGGAGAGGGAAGCAAAAAAAAGGAGGAGGAGCAGAATAATAAGGCCAACAACAGGGCGCCCTCTCTCTCCCTCTTGGACTCATTCGTTTCAATCGCATCTCTCTCTCTCTCTCCCTTCATTTACTTTCTTTTTTATAACAGAGGAGAGAGGCAGAGAGATTTTGAATTACCCAAACAATGGAGAAAGTTTAGACATAGATAAGAGATTGGAAAGAAAAGCATTATAAAACAAAGAAAGGAAGAAAAGGAAAAGGGAAAGATGGTGAGGAGAAGGGGAAAAATGGTGGTGGTGAAGGTGAAAGTGGTGGTGCCCTCTTACCAGACATAAATTCATTTCCCTACGAACTCCATTCTCTCTCTCTCTCTCCCTCTCTCCTATTCAACACTCCGTCTACTCCTAAGACTTGAGAGGGTGGGAAGAACAGCATCTTCCTTGTCTTTCATGCTTCCCTTATGCTTCCTTTTATTATTGCCATCCTTCATTCCCAATCTTCTTCACGTTGCTCCATAAACACACCCACCACCACCGCCTTCTTTTTTTAACTTCCCTTACTTTTTCTTCTTCTTCATCTTCTCCAAACCTTTCTTCTATCCATCGATTCCTTCTTTGTTTCTCCCCTATGGCTGTTCAGGCTCAATATCCTTCTAATGTTTTGCTCTTAAACAGAAACGGTCAAGAAGGGCATGATTATCCATTACAGCCACAACCAGGAGGTTTTCTTGACCAGACTCATATGGTGTTTAACAACAGTACAGGCGGAAACAATTCTCGCAAAAGAGGAAGAGAAATTTCAACTGCCATTACGTCCATCGCGGCTCCGATCAATTTCGCTGCGGTACAGCAACCTCGTCCTCCTCTCCTTGTTGACCTCGCCAAACTCCACAACCACCAAAACAATGTCGTCTCCACTGGCCTCCGCCTGTCCTCCGGCGACCATCAACTGAATCAACCGCCGCAACAGCAACATCATCAACAACAGCAACATCATCAACAACAGCAACATCATCAACAACAGCAACATCAACATAATCACAATCTCGTCCCTCAATCATCATCGGCTTTCTTCTCGCTATTATCAGACGATTTCGCCTCTAATTTCAAACGGCAACAAGACGAAATAGATCAATTCCTTCAAGCACAGGAAGAGCAACTGCGGCGCACATTAGCAGAGAAAAGACAGAGACACTACCGTGCGCTTCTGGATGCGGTGGAGAAATCGGTATTCAGAAGATTAAGAGAGAGGGAGGCGGAGGTGGAAAAGGCAACTCGTCGAAACGCCGAGTTAGAAGCACGAGCCGCCCAGCTTAGCATCGAGGCGCAAGTCTGGCAAGCCAAAGCTAGGGCACAAGAAGCCACCGCCGTATCTTTGCAGGCACAACTGCAACGAGCGATGTCCATCGGCGGCGGAGGTGGAGGCGGAGGCGACGGAGGAGATGGCGGCACCGCCGATGATGCCGAGTCGGCTCACATTGACCCGGACCGAGTCGCTATTTTGGGACCGAGTTGCAGAGAGTGTAGAAAGCGCTTGGCGTCGGTGGTGCTTTTGCCGTGCCGTCATCTCTGCCTCTGTACAGACTGTGATCGAGTGGCTCAGACTTGCCCGTTGTGCCACATTCAGCGAAGCTCCAGCGTAGAGGTCTATCTCTCGTAGGGCCCAATCCCACGGCCCAATGCGGGTTACGCCCATAAACCGGCCCAGACAGTTCAATTGGCGGTTTTTTTCCTTCTTTTTTCCTTAAAATTTTAAAAAAAGTATTTAAGTAATAAAAGAATTACATTACCTTTTTTCATTATTATTTTTCGAAATATTCTGATAGACCATCCGAAACTTTTTTTTTTCCTTCTTTTTGCTTTTTTCTTTTTTGGAATGCCCGTGGAGGTAATGTAAATTGGCCACATTGCGGATTTTCCTTTCTTTTTTTTCTTTTTTTTTTTTAAATTTTAATTTTTATGGAATTTCATTCATTCATCTCCTAAATTATTTATTCAAAAAACTTCTTCAA

Coding sequence (CDS)

ATGGCTGTTCAGGCTCAATATCCTTCTAATGTTTTGCTCTTAAACAGAAACGGTCAAGAAGGGCATGATTATCCATTACAGCCACAACCAGGAGGTTTTCTTGACCAGACTCATATGGTGTTTAACAACAGTACAGGCGGAAACAATTCTCGCAAAAGAGGAAGAGAAATTTCAACTGCCATTACGTCCATCGCGGCTCCGATCAATTTCGCTGCGGTACAGCAACCTCGTCCTCCTCTCCTTGTTGACCTCGCCAAACTCCACAACCACCAAAACAATGTCGTCTCCACTGGCCTCCGCCTGTCCTCCGGCGACCATCAACTGAATCAACCGCCGCAACAGCAACATCATCAACAACAGCAACATCATCAACAACAGCAACATCATCAACAACAGCAACATCAACATAATCACAATCTCGTCCCTCAATCATCATCGGCTTTCTTCTCGCTATTATCAGACGATTTCGCCTCTAATTTCAAACGGCAACAAGACGAAATAGATCAATTCCTTCAAGCACAGGAAGAGCAACTGCGGCGCACATTAGCAGAGAAAAGACAGAGACACTACCGTGCGCTTCTGGATGCGGTGGAGAAATCGGTATTCAGAAGATTAAGAGAGAGGGAGGCGGAGGTGGAAAAGGCAACTCGTCGAAACGCCGAGTTAGAAGCACGAGCCGCCCAGCTTAGCATCGAGGCGCAAGTCTGGCAAGCCAAAGCTAGGGCACAAGAAGCCACCGCCGTATCTTTGCAGGCACAACTGCAACGAGCGATGTCCATCGGCGGCGGAGGTGGAGGCGGAGGCGACGGAGGAGATGGCGGCACCGCCGATGATGCCGAGTCGGCTCACATTGACCCGGACCGAGTCGCTATTTTGGGACCGAGTTGCAGAGAGTGTAGAAAGCGCTTGGCGTCGGTGGTGCTTTTGCCGTGCCGTCATCTCTGCCTCTGTACAGACTGTGATCGAGTGGCTCAGACTTGCCCGTTGTGCCACATTCAGCGAAGCTCCAGCGTAGAGGTCTATCTCTCGTAG

Protein sequence

MAVQAQYPSNVLLLNRNGQEGHDYPLQPQPGGFLDQTHMVFNNSTGGNNSRKRGREISTAITSIAAPINFAAVQQPRPPLLVDLAKLHNHQNNVVSTGLRLSSGDHQLNQPPQQQHHQQQQHHQQQQHHQQQQHQHNHNLVPQSSSAFFSLLSDDFASNFKRQQDEIDQFLQAQEEQLRRTLAEKRQRHYRALLDAVEKSVFRRLREREAEVEKATRRNAELEARAAQLSIEAQVWQAKARAQEATAVSLQAQLQRAMSIGGGGGGGGDGGDGGTADDAESAHIDPDRVAILGPSCRECRKRLASVVLLPCRHLCLCTDCDRVAQTCPLCHIQRSSSVEVYLS

Homology

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BLAST of CmaCh02G015830 vs. ExPASy Swiss-Prot
Match: Q9FHE4 (BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana OX=3702 GN=BRG1 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 6.8e-17
Identity = 68/205 (33.17%), Postives = 113/205 (55.12%), Query Frame = 0


Query: 150 SLLSDDFASNFKRQQDEIDQFLQAQEEQLRRTLAEKRQRHYRALLDAVEKSVFRRLRERE 209
           SL+  +  S  ++Q  EID+F+  Q E LR  L  +++   R L  AV+ ++ ++L+ ++
Sbjct: 96  SLIDAELVSQIQQQNSEIDRFVAQQTETLRIELEARQRTQTRMLASAVQNAILKKLKAKD 155

Query: 210 AEVEKATRRNAELEARAAQLSIEAQVWQAKARAQEATAVSLQAQLQRAMSIGGGGGGGGD 269
            E+ +  + N  L+ R   L +E Q+W+  A+  EATA +L++ L++ ++         D
Sbjct: 156 EEIIRMGKLNWVLQERVKNLYVENQIWRDLAQTNEATANNLRSNLEQVLA-------QVD 215

Query: 270 GGDG------GTADDAES---AHIDPDRVAILGPSCRECRKRLASVVLLPCRHLCLCTDC 329
             D         ADDAES   +    D  A++   C+ C +  ASV++LPCRHLCLCT C
Sbjct: 216 DLDAFRRPLVEEADDAESSCGSCDGGDVTAVVNGGCKRCGELTASVLVLPCRHLCLCTVC 275

Query: 330 DRVA--QTCPLCHIQRSSSVEVYLS 344
              A  +TCP+C +  ++SV V +S
Sbjct: 276 GSSALLRTCPVCDMVMTASVHVNMS 293

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BLAST of CmaCh02G015830 vs. ExPASy Swiss-Prot
Match: Q9LDD1 (Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana OX=3702 GN=BRG3 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 8.3e-15
Identity = 66/213 (30.99%), Postives = 111/213 (52.11%), Query Frame = 0


Query: 152 LSDDFASNFKRQQDEIDQFLQAQEEQLRRTLAEKRQRHYRALLDAVEKSVFRRLREREAE 211
           L  D +SN ++   +ID+ +    E++R  + EKR+   R +++AVE+ + + LR ++ E
Sbjct: 126 LGQDLSSNVQQHHFDIDRLISNHVERMRMEIEEKRKTQGRRIVEAVEQGLMKTLRAKDDE 185

Query: 212 VEKATRRNAELEARAAQLSIEAQVWQAKARAQEATAVSLQAQLQRAMSI----------- 271
           +    + N  LE +   L +E Q+W+  A++ EAT  +L++ LQ+ ++            
Sbjct: 186 INHIGKLNLFLEEKVKSLCVENQIWRDVAQSNEATVNALRSNLQQVLAAVERNRWEEPPT 245

Query: 272 ----GGGGGGGGDGGDG-----GTADDAESAHIDPDRVAILGPS-CRECRKRLASVVLLP 331
                    G  D GD        A +A+    D  ++  +G S CR C K  ASV+LLP
Sbjct: 246 VADDAQSCCGSNDEGDSEEERWKLAGEAQ----DTKKMCRVGMSMCRSCGKGEASVLLLP 305

Query: 332 CRHLCLCTDCDRVAQTCPLCHIQRSSSVEVYLS 344
           CRH+CLC+ C     TCP+C   +++S+ V LS
Sbjct: 306 CRHMCLCSVCGSSLNTCPICKSPKTASLHVNLS 334

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BLAST of CmaCh02G015830 vs. ExPASy Swiss-Prot
Match: O81851 (E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana OX=3702 GN=BOI PE=1 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.1e-14
Identity = 66/210 (31.43%), Postives = 109/210 (51.90%), Query Frame = 0


Query: 150 SLLSDDFASNFK-RQQDEIDQFLQAQEEQLRRTLAEKRQRHYRALLDAVEKSVFRRLRER 209
           SL++ +  S  + +QQ EID+F+  Q E+LR  +  ++Q   R L  AV+  + ++L+E+
Sbjct: 105 SLINVELVSQIQNQQQSEIDRFVAQQTEKLRIEIEARQQTQTRMLASAVQNVIAKKLKEK 164

Query: 210 EAEVEKATRRNAELEARAAQLSIEAQVWQAKARAQEATAVSLQAQLQRAMS--------- 269
           + E+ +    N  L+ R   L +E Q+W+  A+  EA A +L+  L + ++         
Sbjct: 165 DDEIVRIRNLNWVLQERVKSLYVENQIWRDIAQTNEANANTLRTNLDQVLAQLETFPTAS 224

Query: 270 ----IGGGGGGGGDGGDGGTADDAESAHIDPDRVAILGPSCRECRKRLASVVLLPCRHLC 329
                      G   GDGG            + V  +G  C+ C +R ASV++LPCRHLC
Sbjct: 225 AVVEDDAESSCGSCCGDGG-----------GEAVTAVGGGCKRCGEREASVLVLPCRHLC 284

Query: 330 LCTDC--DRVAQTCPLCHIQRSSSVEVYLS 344
           LCT C    + +TCP+C +  ++SV V +S
Sbjct: 285 LCTVCGGSALLRTCPVCDMVMNASVHVNMS 303

[Close]

BLAST of CmaCh02G015830 vs. ExPASy Swiss-Prot
Match: F4IDI6 (Probable BOI-related E3 ubiquitin-protein ligase 2 OS=Arabidopsis thaliana OX=3702 GN=BRG2 PE=1 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 3.6e-10
Identity = 96/351 (27.35%), Postives = 159/351 (45.30%), Query Frame = 0


Query: 26  LQPQPGGFLDQTHMVFNNSTGGNNSRKRGREISTAITSIAAPINFAAVQQPRPPLLVDLA 85
           ++P  GGF +      NN TG              ++  + P + +      PPLL    
Sbjct: 28  MEPTSGGFCN------NNQTGYG-----------VVSPFSVPNHTSTTTTATPPLL---- 87

Query: 86  KLHNHQNNVVSTGLRLSSGDHQLNQP--PQQQHHQQQQHHQQQQHHQQQQHQHNHNLV-- 145
            ++   + + +T    + G   L+    P     + +   +   HH   Q+  + + V  
Sbjct: 88  HVYGGSDTIPTTAGYYADGATNLDCEFFPLPTRKRSRDSSRSNYHHLLLQNPRSSSCVNA 147

Query: 146 --PQSSSAFFSLLSD--DFASNFKRQQDEIDQFLQA---QEEQLRRTLAEKRQRHYRALL 205
               +++  FS L    D +S+  +QQ EID+F+     Q E+++  + EKR+R  R ++
Sbjct: 148 ATTTTTTTLFSFLGQDIDISSHMNQQQHEIDRFVSLHLYQMERVKYEIEEKRKRQARTIM 207

Query: 206 DAVEKSVFRRLREREAEVEKATRRNAELEARAAQLSIEAQVWQAKARAQEATAVSLQAQL 265
           +A+E+ + +RLR +E E E+  + N  LE R   LSIE Q+W+  A+  EATA  L+  L
Sbjct: 208 EAIEQGLVKRLRVKEEERERIGKVNHALEERVKSLSIENQIWRDLAQTNEATANHLRTNL 267

Query: 266 QRAMS-IGGGGGGGGDGGDGGTADDAESA---------------HIDPDRVA------IL 325
           +  ++ +     G G   +    DDAES                 +  +R A        
Sbjct: 268 EHVLAQVKDVSRGAGLEKNMNEEDDAESCCGSSCGGGGEETVRRRVGLEREAQDKAERRR 327

Query: 326 GPSCRECRKRLASVVLLPCRHLCLCTDCDRVAQTCPLCHIQRSSSVEVYLS 344
              CR C +  + V+LLPCRHLCLC  C     TCP+C   +++SV V +S
Sbjct: 328 RRMCRNCGEEESCVLLLPCRHLCLCGVCGSSVHTCPICTSPKNASVHVNMS 357

[Close]

BLAST of CmaCh02G015830 vs. TAIR 10
Match: AT5G47050.1 (SBP (S-ribonuclease binding protein) family protein )

HSP 1 Score: 210.3 bits (534), Expect = 2.4e-54
Identity = 155/356 (43.54%), Postives = 205/356 (57.58%), Query Frame = 0


Query: 1   MAVQAQYPSNVLLLNRNGQEGHDYPLQPQPGGFLDQTHMVFNNSTGGNNSRKRGREISTA 60
           MAVQA +  + L    NGQEG+D P + Q           F++   G ++RKR RE+S+ 
Sbjct: 1   MAVQAHHHPSTLFFLNNGQEGNDQPHKSQ-----------FHSINAGVDTRKRAREVSSV 60

Query: 61  I--TSIAAPINFAAVQQPRPPLLVDLAKLHNHQN-NVVSTGLRLSSGDHQLNQPPQQQHH 120
           I     AAP+N        PP       +   QN NVVSTGLRLS               
Sbjct: 61  IDLDITAAPMN--------PPPQTPPQVIGRRQNPNVVSTGLRLS--------------- 120

Query: 121 QQQQHHQQQQHHQQQQHQHNHNLVPQSSSAFFSL-LSDDFASNFKRQQDEIDQFLQAQEE 180
                 ++Q  +Q+Q+              F S  ++ D A   K Q DE+++FLQ Q E
Sbjct: 121 ------REQSQNQEQR--------------FLSFPITGDVAGEIKSQTDELNRFLQIQGE 180

Query: 181 QLRRTLAEKRQRHYRALLDAVEKSVFRRLREREAEVEKATRRNAELEARAAQLSIEAQVW 240
           QL+R LAE  +R+YR LL   E+SV RRLRE+EAE+EKATRR+ ELEARA Q+  EA+ W
Sbjct: 181 QLKRMLAENSERNYRELLRTTEESVRRRLREKEAEIEKATRRHVELEARATQIETEARAW 240

Query: 241 QAKARAQEATAVSLQAQLQRAMSIGGGGG---------GGGDGGDGGTADDAESAHIDPD 300
           Q +A A+EA A SLQAQL +A+ +  GGG         G  DG D   A+DAESA++DPD
Sbjct: 241 QMRAAAREAEATSLQAQLHQAVVVAHGGGVITTVEPQSGSVDGVD--EAEDAESAYVDPD 300

Query: 301 RVAILGPSCRECRKRLASVVLLPCRHLCLCTDCDRVAQTCPLCHIQRSSSVEVYLS 344
           RV ++GP CR CR+R A+V+ LPCRHL +CT+CD   + CPLC   ++SSVEV+ S
Sbjct: 301 RVEMIGPGCRICRRRSATVLALPCRHLVMCTECDGSVRICPLCLSTKNSSVEVFYS 300

[Close]

BLAST of CmaCh02G015830 vs. TAIR 10
Match: AT1G32740.1 (SBP (S-ribonuclease binding protein) family protein )

HSP 1 Score: 209.1 bits (531), Expect = 5.4e-54
Identity = 157/357 (43.98%), Postives = 208/357 (58.26%), Query Frame = 0


Query: 1   MAVQAQ-YPSNVLLLN-RNGQEGH--DYPLQPQPGG-FLDQTHMVFNNSTGGNNSRKRGR 60
           MAVQAQ + SN+L LN RNG+E    ++ LQ Q  G FLDQT+M+FNN  G +N RKR R
Sbjct: 1   MAVQAQHHSSNLLFLNKRNGKEKEHSNFTLQSQAAGDFLDQTNMLFNN--GSSNQRKRRR 60

Query: 61  EISTAITSIAAPINFAAVQQPRPPLLVDLAKLHNHQ---NNVVSTGLRLSSGDHQLNQPP 120
           E +              +Q  + P ++DL+ LHN+    +N+V TGLRL SG+       
Sbjct: 61  ETNNH--------QLLPMQSHQFPQVIDLSLLHNYNHPPSNMVHTGLRLFSGE------- 120

Query: 121 QQQHHQQQQHHQQQQHHQQQQHQHNHNLVPQSSSAFFSLLSDDFASNFKRQQDEIDQFLQ 180
                            Q Q+  H              L  D FA++  RQ +E+D+FL 
Sbjct: 121 ----------------DQAQKISH--------------LSEDVFAAHINRQSEELDEFLH 180

Query: 181 AQEEQLRRTLAEKRQRHYRALLDAVEKSVFRRLREREAEVEKATRRNAELEARAAQLSIE 240
           AQ E+LRRTLAEKR+ HY+ALL AVE+S+ R+LRE+E E+E+ATRR+ EL AR +QL  E
Sbjct: 181 AQAEELRRTLAEKRKMHYKALLGAVEESLVRKLREKEVEIERATRRHNELVARDSQLRAE 240

Query: 241 AQVWQAKARAQEATAVSLQAQLQRAMSIGGGGGGGGDGGDGGT----------ADDAESA 300
            QVWQ +A+A E  A SLQ+QLQ+A++   GG                      DDAES 
Sbjct: 241 VQVWQERAKAHEDAAASLQSQLQQAVNQCAGGCVSAQDSRAAEEGLLCTTISGVDDAESV 300

Query: 301 HIDPDRVAILGPSCRECRKRLASVVLLPCRHLCLCTDCDRVAQTCPLCHIQRSSSVE 340
           ++DP+RV    P+C+ CR+R A+VV+LPCRHL +C  CDR A  CPLC   R+SSVE
Sbjct: 301 YVDPERVK--RPNCKACREREATVVVLPCRHLSICPGCDRTALACPLCLTLRNSSVE 308

[Close]

BLAST of CmaCh02G015830 vs. TAIR 10
Match: AT4G17680.1 (SBP (S-ribonuclease binding protein) family protein )

HSP 1 Score: 201.1 bits (510), Expect = 1.5e-51
Identity = 144/346 (41.62%), Postives = 193/346 (55.78%), Query Frame = 0


Query: 1   MAVQAQYPSNVLLLNRNGQEGHDYPLQPQPGGFLDQTHMVFNNSTGGNNSRKRGREISTA 60
           MA+QAQ+PS     N NGQE  D  LQPQ   F        N +  G +SRKR RE+ ++
Sbjct: 18  MAIQAQHPSRFFFNNSNGQEASDCSLQPQDTPFT-------NFTKAGVDSRKRSREVYSS 77

Query: 61  ITSIAAPINFAAVQQPRPPLLVDLAKLHNHQNNVVSTGLRLSSGDHQLNQPPQQQHHQQQ 120
                 P        P+P  ++D+ +L     NVVSTGLRL                   
Sbjct: 78  ALMNPPP--------PKPSQVIDITELLQKTPNVVSTGLRL------------------- 137

Query: 121 QHHQQQQHHQQQQHQHNHNLVPQSSSAFFSLLSDDFASNFKRQQDEIDQFLQAQEEQLRR 180
             H Q Q+ QQ                FFS L  D     KRQ+DE+D+F+Q Q E+LRR
Sbjct: 138 -FHDQSQNQQQ----------------FFSSLPGDVTGKIKRQRDELDRFIQTQGEELRR 197

Query: 181 TLAEKRQRHYRALLDAVEKSVFRRLREREAEVEKATRRNAELEARAAQLSIEAQVWQAKA 240
           TLA+ R+R Y  LL A E+ V R+LR++EAE+EKATRR+AELEAR A +  EA+ WQ +A
Sbjct: 198 TLADNRERRYVELLCAAEEIVGRKLRKKEAELEKATRRHAELEARVAHIVEEARNWQLRA 257

Query: 241 RAQEATAVSLQAQLQRAM-----SIGGGGGGGGDGGDGGTADDAESAHIDPDRVAILGPS 300
             +EA   SL A LQ+A+     +       G DGGD   A+DAES ++DP+R+ ++GPS
Sbjct: 258 ATREAEVSSLHAHLQQAIANRLDTAAKQSTFGEDGGDAEEAEDAESVYVDPERIELIGPS 312

Query: 301 CRECRKRLASVVLLPCRHLCLCTDCD-RVAQTCPLCHIQRSSSVEV 341
           CR CR++ A+V+ LPC+HL LC  CD    + CP+C   ++S VEV
Sbjct: 318 CRICRRKSATVMALPCQHLILCNGCDVGAVRVCPICLAVKTSGVEV 312

[Close]

BLAST of CmaCh02G015830 vs. TAIR 10
Match: AT4G17680.2 (SBP (S-ribonuclease binding protein) family protein )

HSP 1 Score: 168.7 bits (426), Expect = 8.2e-42
Identity = 117/271 (43.17%), Postives = 159/271 (58.67%), Query Frame = 0


Query: 76  PRPPLLVDLAKLHNHQNNVVSTGLRLSSGDHQLNQPPQQQHHQQQQHHQQQQHHQQQQHQ 135
           P+P  ++D+ +L     NVVSTGLRL                     H Q Q+ QQ    
Sbjct: 6   PKPSQVIDITELLQKTPNVVSTGLRL--------------------FHDQSQNQQQ---- 65

Query: 136 HNHNLVPQSSSAFFSLLSDDFASNFKRQQDEIDQFLQAQEEQLRRTLAEKRQRHYRALLD 195
                       FFS L  D     KRQ+DE+D+F+Q Q E+LRRTLA+ R+R Y  LL 
Sbjct: 66  ------------FFSSLPGDVTGKIKRQRDELDRFIQTQGEELRRTLADNRERRYVELLC 125

Query: 196 AVEKSVFRRLREREAEVEKATRRNAELEARAAQLSIEAQVWQAKARAQEATAVSLQAQLQ 255
           A E+ V R+LR++EAE+EKATRR+AELEAR A +  EA+ WQ +A  +EA   SL A LQ
Sbjct: 126 AAEEIVGRKLRKKEAELEKATRRHAELEARVAHIVEEARNWQLRAATREAEVSSLHAHLQ 185

Query: 256 RAM-----SIGGGGGGGGDGGDGGTADDAESAHIDPDRVAILGPSCRECRKRLASVVLLP 315
           +A+     +       G DGGD   A+DAES ++DP+R+ ++GPSCR CR++ A+V+ LP
Sbjct: 186 QAIANRLDTAAKQSTFGEDGGDAEEAEDAESVYVDPERIELIGPSCRICRRKSATVMALP 240

Query: 316 CRHLCLCTDCD-RVAQTCPLCHIQRSSSVEV 341
           C+HL LC  CD    + CP+C   ++S VEV
Sbjct: 246 CQHLILCNGCDVGAVRVCPICLAVKTSGVEV 240

[Close]

BLAST of CmaCh02G015830 vs. TAIR 10
Match: AT1G10650.1 (SBP (S-ribonuclease binding protein) family protein )

HSP 1 Score: 107.5 bits (267), Expect = 2.2e-23
Identity = 95/315 (30.16%), Postives = 152/315 (48.25%), Query Frame = 0


Query: 52  KRGREISTAITSIAAPINFAAVQQPRPPLLVDLAKLHNH--------QNNVVSTGLRLSS 111
           KRGRE  +   +I         Q+ +  L + L   +N+        + N+VSTGLRLS 
Sbjct: 62  KRGREAESISNNI---------QRQQQKLQMSLNYNYNNTSVREEVPKENLVSTGLRLSY 121

Query: 112 GDHQLNQPPQQQHHQQQQHHQQQQHHQQQQHQHNHNLVPQS-----SSAFFSLLSDDFAS 171
            D                             +HN ++   S     +S  F  L D    
Sbjct: 122 DD----------------------------DEHNSSVTSASGSILAASPIFQSLDDSLRI 181

Query: 172 NFKRQQDEIDQFLQAQEEQLRRTLAEKRQRHYRALLDAVEKSVFRRLREREAEVEKATRR 231
           +  RQ+DE DQF++ Q  Q+ + + + +QRH  + L  +EK V ++L+E++ E+    ++
Sbjct: 182 DLHRQKDEFDQFIKIQAAQMAKGVRDMKQRHIASFLTTLEKGVSKKLQEKDHEINDMNKK 241

Query: 232 NAELEARAAQLSIEAQVWQAKARAQEATAVSLQAQLQRAM----SIGGGGGGGGDGGDGG 291
           N EL  R  Q+++EAQ W  +A+  E+    L+A LQ+AM    S+      G +G    
Sbjct: 242 NKELVERIKQVAMEAQNWHYRAKYNESVVNVLKANLQQAMSHNNSVIAAADQGKEGFGDS 301

Query: 292 TADDAESAHIDP-----DRVAI-LGPSCRECRKRLASVVLLPCRHLCLCTDCDRVAQTCP 344
             DDA S++IDP     + + I     C+ C  +  SV+++PCRHL LC +CD   + CP
Sbjct: 302 EIDDAASSYIDPNNNNNNNMGIHQRMRCKMCNVKEVSVLIVPCRHLSLCKECDVFTKICP 339

The following BLAST results are available for this feature:

BLAST of CmaCh02G015830 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHE4	6.8e-17	33.17	BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana OX=3702 GN=BRG...	[more]
Q9LDD1	8.3e-15	30.99	Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana OX=37...	[more]
O81851	3.1e-14	31.43	E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana OX=3702 GN=BOI PE=1 SV=1	[more]
F4IDI6	3.6e-10	27.35	Probable BOI-related E3 ubiquitin-protein ligase 2 OS=Arabidopsis thaliana OX=37...	[more]

BLAST of CmaCh02G015830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G47050.1	2.4e-54	43.54	SBP (S-ribonuclease binding protein) family protein	[more]
AT1G32740.1	5.4e-54	43.98	SBP (S-ribonuclease binding protein) family protein	[more]
AT4G17680.1	1.5e-51	41.62	SBP (S-ribonuclease binding protein) family protein	[more]
AT4G17680.2	8.2e-42	43.17	SBP (S-ribonuclease binding protein) family protein	[more]
AT1G10650.1	2.2e-23	30.16	SBP (S-ribonuclease binding protein) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima (Rimu) v1.1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 205..239
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 295..332 e-value: 4.8E-7 score: 29.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..36
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 260..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..138
None	No IPR available	PANTHER	PTHR42647:SF30	BOI-RELATED E3 UBIQUITIN-PROTEIN LIGASE 1-LIKE	coord: 1..342
IPR017066	E3 ubiquitin-protein ligase BOI-like	PIRSF	PIRSF036836	SBP1_RNase_bind	coord: 1..117 e-value: 2.4E-5 score: 22.2 coord: 105..343 e-value: 1.1E-80 score: 269.8
IPR017066	E3 ubiquitin-protein ligase BOI-like	PANTHER	PTHR42647	SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN	coord: 1..342
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 280..343 e-value: 2.6E-9 score: 38.3
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 296..331 score: 9.700961

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh02G015830.1	CmaCh02G015830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity